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Search of human proteins with 239751744
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751744 PREDICTED: hypothetical protein [Homo sapiens]
(352 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751744 PREDICTED: hypothetical protein [Homo sapiens] 749 0.0
gi|239757235 PREDICTED: hypothetical protein [Homo sapiens] 745 0.0
gi|40807447 papillary renal cell carcinoma translocation-associa... 36 0.045
gi|40807450 papillary renal cell carcinoma translocation-associa... 36 0.045
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 36 0.059
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 36 0.059
gi|116812624 tau tubulin kinase 2 [Homo sapiens] 36 0.059
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.059
gi|239753963 PREDICTED: similar to apopolysialoglycoprotein [Hom... 35 0.10
gi|28372567 zinc finger protein 575 [Homo sapiens] 35 0.10
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 35 0.13
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 35 0.13
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom... 33 0.38
gi|169210434 PREDICTED: hypothetical protein [Homo sapiens] 33 0.38
gi|187960059 syndecan 3 [Homo sapiens] 33 0.50
gi|226437579 NAC alpha domain containing [Homo sapiens] 32 0.66
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 32 0.66
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 32 0.66
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 32 0.66
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 32 0.66
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 32 0.66
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 32 0.66
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 32 0.86
gi|150418009 transforming, acidic coiled-coil containing protein... 32 0.86
gi|239755142 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H... 32 1.1
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 32 1.1
gi|188536004 zinc finger protein 469 [Homo sapiens] 31 1.5
gi|193083163 roundabout, axon guidance receptor, homolog 2 isofo... 31 1.5
gi|61888896 roundabout, axon guidance receptor, homolog 2 isofor... 31 1.5
>gi|239751744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 749 bits (1933), Expect = 0.0
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA 60
MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA
Sbjct: 1 MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA 60
Query: 61 ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFLSLEAAARPEA 120
ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFLSLEAAARPEA
Sbjct: 61 ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFLSLEAAARPEA 120
Query: 121 IAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS 180
IAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS
Sbjct: 121 IAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS 180
Query: 181 SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR 240
SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR
Sbjct: 181 SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR 240
Query: 241 AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF 300
AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF
Sbjct: 241 AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF 300
Query: 301 AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY 352
AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY
Sbjct: 301 AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY 352
>gi|239757235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 745 bits (1924), Expect = 0.0
Identities = 350/352 (99%), Positives = 350/352 (99%)
Query: 1 MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA 60
MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA
Sbjct: 1 MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA 60
Query: 61 ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFLSLEAAARPEA 120
ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPF SLEAAARPEA
Sbjct: 61 ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEA 120
Query: 121 IAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS 180
IAGLTQCTAHGEPHFPE SPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS
Sbjct: 121 IAGLTQCTAHGEPHFPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS 180
Query: 181 SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR 240
SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR
Sbjct: 181 SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR 240
Query: 241 AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF 300
AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF
Sbjct: 241 AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF 300
Query: 301 AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY 352
AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY
Sbjct: 301 AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY 352
>gi|40807447 papillary renal cell carcinoma translocation-associated
gene product isoform 1 [Homo sapiens]
Length = 491
Score = 36.2 bits (82), Expect = 0.045
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 29 AFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTR 88
AF+R +P +++ +T L+P V T T SP + +A A+ +T+
Sbjct: 203 AFSRKPSDGSPDTKPSRLASKTKTSSLAPVVGTTTTTPSP----SAIKAAAKSAALQVTK 258
Query: 89 RVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPHFPESSPCGTNVPEA 148
++ E D E P+ F SL A P + + + P PE P GT PE
Sbjct: 259 QITQEE---DDSDEEVAPENFFSLPEKAEPPGV----EPYPYPIPTVPEELPPGTE-PEP 310
Query: 149 A 149
A
Sbjct: 311 A 311
>gi|40807450 papillary renal cell carcinoma translocation-associated
gene product isoform 2 [Homo sapiens]
Length = 459
Score = 36.2 bits (82), Expect = 0.045
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 29 AFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTR 88
AF+R +P +++ +T L+P V T T SP + +A A+ +T+
Sbjct: 203 AFSRKPSDGSPDTKPSRLASKTKTSSLAPVVGTTTTTPSP----SAIKAAAKSAALQVTK 258
Query: 89 RVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPHFPESSPCGTNVPEA 148
++ E D E P+ F SL A P + + + P PE P GT PE
Sbjct: 259 QITQEE---DDSDEEVAPENFFSLPEKAEPPGV----EPYPYPIPTVPEELPPGTE-PEP 310
Query: 149 A 149
A
Sbjct: 311 A 311
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 35.8 bits (81), Expect = 0.059
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 32 RLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPR-------ARASA 84
R+ R+ CP P P + AR + SP VA+T + R P + P +PR + AS
Sbjct: 81 RVPRRPVSCPGPEPLALAAR-RSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASG 139
Query: 85 DLTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGL 124
V G R A L R CP+ SL A A E A +
Sbjct: 140 WSGPPVGGARAWAR-LCRRRCPR-CRSLSAPASEERGAAM 177
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 35.8 bits (81), Expect = 0.059
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 32 RLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPR-------ARASA 84
R+ R+ CP P P + AR + SP VA+T + R P + P +PR + AS
Sbjct: 81 RVPRRPVSCPGPEPLALAAR-RSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASG 139
Query: 85 DLTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGL 124
V G R A L R CP+ SL A A E A +
Sbjct: 140 WSGPPVGGARAWAR-LCRRRCPR-CRSLSAPASEERGAAM 177
>gi|116812624 tau tubulin kinase 2 [Homo sapiens]
Length = 1244
Score = 35.8 bits (81), Expect = 0.059
Identities = 50/200 (25%), Positives = 78/200 (39%), Gaps = 29/200 (14%)
Query: 39 KCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRR---VAGERV 95
K PRP W N T ++ + ++ R P P P R + R V G
Sbjct: 1052 KIPRPVSWVN---TDQVNSSTSSQFFPRPP------PGKPPTRPGVEARLRRYKVLGSSN 1102
Query: 96 TAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPK 155
+ +DL R + + +P + TQC + G PH P++ P VP + P+
Sbjct: 1103 SDSDLFSRLAQ---ILQNGSQKPRST---TQCKSPGSPHNPKTPPKSPVVPRRSPSASPR 1156
Query: 156 -TTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRR----PRAGQLGPCANCPGAHSRPLVN 210
++LP+ + R G+ H SS GR +G +C H +P N
Sbjct: 1157 SSSLPR--TSSSSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQQEHCKPSKN 1214
Query: 211 DTTRNQGTPSTYKGHGARTK 230
+G+ S + H A TK
Sbjct: 1215 GL---KGSGSLHH-HSASTK 1230
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.8 bits (81), Expect = 0.059
Identities = 58/236 (24%), Positives = 87/236 (36%), Gaps = 27/236 (11%)
Query: 10 SRAHFALTTVPRGRRRHHPAFTRLNRKAR--KCPRPRPWSN---------RARTQGLSPA 58
SR ALT + G R P+ + AR + P P P + +R S A
Sbjct: 2179 SRIALALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAA 2238
Query: 59 VAATHTCRSPQ----QGLTVPQAPRARASADLTRRVAGERVTAADLRERHCP-KPFLSLE 113
+ R+P L + P A A+ +L +A +L + P P ++L
Sbjct: 2239 AMNLASARTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLA 2298
Query: 114 AAARPEAIAGLTQCTAHGEPHFPESSPCGTNVPEA---ANRRHPKT---TLPKGLCG--- 164
A P A+A L+ T G P + P + P+A AN P++ T P + G
Sbjct: 2299 GARTPAALAALS-LTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRT 2357
Query: 165 CADLVRRGQTGHGFVSSLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPS 220
A L T +L+ L G S PL+ D R++ PS
Sbjct: 2358 AAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLL-DRARSRTPPS 2412
>gi|239753963 PREDICTED: similar to apopolysialoglycoprotein [Homo
sapiens]
Length = 538
Score = 35.0 bits (79), Expect = 0.10
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 15/144 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P S A+ + + ++ R P T+ +A
Sbjct: 182 TMSEAAQRRHPADTMSEAAQRRDPADT-MSEAAQRRDPADTISEAAQRRDPAD--TMSEA 238
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD A R T ++ +R P +S EAA R + +++ +P
Sbjct: 239 AQRRHPADTMSEAAQRRDPADTISEAAQRRDPADTMS-EAAQRRDPADTISEAAQRRDP- 296
Query: 135 FPESSPCGTNVPEAANRRHPKTTL 158
+ EAA RRHP T+
Sbjct: 297 -------ADTMSEAAQRRHPADTM 313
Score = 33.9 bits (76), Expect = 0.23
Identities = 39/162 (24%), Positives = 60/162 (37%), Gaps = 18/162 (11%)
Query: 3 KHTAGVCSRA---HFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAV 59
+H A S A T+ +R HPA T R+ P + Q PA
Sbjct: 99 RHPADTMSEAVQRRHPADTMSEAAQRRHPADTMSEAAQRRHPAD---TMSEAVQRRHPAD 155
Query: 60 AATHTCRSPQQGLTVPQAPRARASADLTRRVAGERV---TAADLRERHCPKPFLSLEAAA 116
+ + T+ +A + R AD A R T ++ +R P +S EAA
Sbjct: 156 TMSEAVQRRDPADTMSEAVQRRHPADTMSEAAQRRHPADTMSEAAQRRDPADTMS-EAAQ 214
Query: 117 RPEAIAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTL 158
R + +++ +P + EAA RRHP T+
Sbjct: 215 RRDPADTISEAAQRRDP--------ADTMSEAAQRRHPADTM 248
Score = 33.1 bits (74), Expect = 0.38
Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 15/144 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P + Q PA + + T+ +A
Sbjct: 299 TMSEAAQRRHPADTMSEAAQRRDPAD---TMSEAAQRRDPADTMSEAVQRRHPADTMSEA 355
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD A R T ++ +R P +S EAA R + +++ P
Sbjct: 356 VQRRHPADTMSEAAQRRDPADTMSEAAQRRHPADTMS-EAAQRRDPADTMSEAAQRRHP- 413
Query: 135 FPESSPCGTNVPEAANRRHPKTTL 158
+ EAA RRHP T+
Sbjct: 414 -------ADTMSEAAQRRHPADTM 430
Score = 32.7 bits (73), Expect = 0.50
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 15/143 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P + Q PA + + T+ +A
Sbjct: 338 TMSEAVQRRHPADTMSEAVQRRHPAD---TMSEAAQRRDPADTMSEAAQRRHPADTMSEA 394
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD A R T ++ +R P +S EAA R + +++ +P
Sbjct: 395 AQRRDPADTMSEAAQRRHPADTMSEAAQRRHPADTMS-EAAQRRDPADTMSEAAQRRDP- 452
Query: 135 FPESSPCGTNVPEAANRRHPKTT 157
+ EAA RRHP T
Sbjct: 453 -------ADTMSEAAQRRHPADT 468
Score = 32.3 bits (72), Expect = 0.66
Identities = 42/162 (25%), Positives = 60/162 (37%), Gaps = 13/162 (8%)
Query: 5 TAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHT 64
T+ R H A TT +RRH PA T R+ P + Q PA +
Sbjct: 40 TSEAAQRRHPADTTSEPVQRRH-PADTMSEAAQRRHPAD---TMSEAVQRRHPADTMSEA 95
Query: 65 CRSPQQGLTVPQAPRARASADLTRRVAGERV---TAADLRERHCPKPFLSLEAAARPEAI 121
+ T+ +A + R AD A R T ++ +R P +S EA R
Sbjct: 96 AQRRHPADTMSEAVQRRHPADTMSEAAQRRHPADTMSEAAQRRHPADTMS-EAVQRRHPA 154
Query: 122 AGLTQCTAHGEPHFPESSPCGTNVP-----EAANRRHPKTTL 158
+++ +P S P EAA RRHP T+
Sbjct: 155 DTMSEAVQRRDPADTMSEAVQRRHPADTMSEAAQRRHPADTM 196
Score = 29.6 bits (65), Expect = 4.3
Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 15/148 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P + Q PA + + T+ +A
Sbjct: 13 TMSEAVQRRHPADTMSEAAQRRHPAD---TTSEAAQRRHPADTTSEPVQRRHPADTMSEA 69
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD R T ++ +R P +S EA R +++ P
Sbjct: 70 AQRRHPADTMSEAVQRRHPADTMSEAAQRRHPADTMS-EAVQRRHPADTMSEAAQRRHP- 127
Query: 135 FPESSPCGTNVPEAANRRHPKTTLPKGL 162
+ EAA RRHP T+ + +
Sbjct: 128 -------ADTMSEAAQRRHPADTMSEAV 148
Score = 29.3 bits (64), Expect = 5.6
Identities = 38/162 (23%), Positives = 57/162 (35%), Gaps = 25/162 (15%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P + Q PA + + T+ +A
Sbjct: 234 TMSEAAQRRHPADTMSEAAQRRDPAD---TISEAAQRRDPADTMSEAAQRRDPADTISEA 290
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD A R T ++ +R P +S EAA R + +++ P
Sbjct: 291 AQRRDPADTMSEAAQRRHPADTMSEAAQRRDPADTMS-EAAQRRDPADTMSEAVQRRHPA 349
Query: 135 FPESS------PCGT------------NVPEAANRRHPKTTL 158
S P T + EAA RRHP T+
Sbjct: 350 DTMSEAVQRRHPADTMSEAAQRRDPADTMSEAAQRRHPADTM 391
>gi|28372567 zinc finger protein 575 [Homo sapiens]
Length = 245
Score = 35.0 bits (79), Expect = 0.10
Identities = 51/222 (22%), Positives = 75/222 (33%), Gaps = 51/222 (22%)
Query: 20 PRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPR 79
PR RRR P + + C + + ++ T L+ A H C P P+
Sbjct: 51 PRPRRRPPP---QRPHRCPDCDKAFSYPSKLATHRLAHGGARPHPC---------PDCPK 98
Query: 80 ARASADLTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGEPHFPESS 139
A + ++A R+T + R CP P++ ++ AH H P
Sbjct: 99 AFSYPS---KLAAHRLTHSGARPHPCPHC---------PKSFGHRSKLAAHLWTHAP--- 143
Query: 140 PCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRPRAGQLGPCAN 199
R +P PK C + L T H A RP PC +
Sbjct: 144 ----------TRPYPCPDCPKSFCYPSKLAAHRHTHH-------ATDARPY-----PCPH 181
Query: 200 CPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSRA 241
CP A S P R P T G++ H +C +A
Sbjct: 182 CPKAFSFPSKLAAHRLCHDPPT--APGSQATAWHRCSSCGQA 221
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 34.7 bits (78), Expect = 0.13
Identities = 49/203 (24%), Positives = 70/203 (34%), Gaps = 33/203 (16%)
Query: 48 NRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRRVAGE------RVTAADLR 101
N+ R G + A A T Q G +A+A +T+ +G+ R AA
Sbjct: 573 NKPRQWGQTAAAAKTRGGGDKQPGWQ-------KAAAGVTKSRSGDGGKKAWRQKAAGTG 625
Query: 102 ERHCPKPFLSLEAAARPEAIAGLTQCTAHG----EPHFP-------ESSPCGTNVPEAAN 150
+ KP+ + A A T T+ G +P + ESS EA
Sbjct: 626 AKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEA 685
Query: 151 RRHPKTTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRPRAGQLGPCANCPGAHSRPLVN 210
R+ P+ K RG G + W RR + +LG GA SR
Sbjct: 686 RKKPRRRRAKS---------RGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGG 736
Query: 211 DTTRNQGTPSTYKGHGARTKKLH 233
+R G + G A K H
Sbjct: 737 AKSRGSGGAKSRSGKKAAASKSH 759
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 34.7 bits (78), Expect = 0.13
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 33 LNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQG---LTVPQAPRARASADLT-- 87
L R+ +C PR +R R +PA AA H R + P AP +R+ DL+
Sbjct: 1219 LPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRHRRAAGGWDLPPPAPTSRSLEDLSSC 1278
Query: 88 -RRVAGERVTAADLRERHCP 106
R R+T R CP
Sbjct: 1279 PRAAPARRLTGPSRHARRCP 1298
>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
sapiens]
Length = 501
Score = 33.1 bits (74), Expect = 0.38
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 8/113 (7%)
Query: 122 AGLTQCTAHGEPH-----FPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGH 176
+G T+ +PH P + C V + R + P G G + R TG
Sbjct: 223 SGATRPKTGAQPHPGGCGVPSARSCALGVGQEQLARAAQPMGPLGAAGRSSGKPRQPTGA 282
Query: 177 GFVSSLTAWGRRPRAGQLG-PCANCPGAHSRPLVNDTTRNQGTPSTYKGHGAR 228
++ + W R PR LG P C + + P + +Q GHG R
Sbjct: 283 AAAAATSTWSRGPRG--LGIPDQACASSRADPGASLAAASQAVCGRSAGHGLR 333
>gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 301
Score = 33.1 bits (74), Expect = 0.38
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query: 113 EAAARPEAIAGLTQCTAHGEPHFPESSPCGTNVPEAANRR--HPKTTLPKGLCGCADLVR 170
E AR A C AHG P P + + A + +T KG G + R
Sbjct: 63 EGPARARLEAERAGC-AHG-PGAPARTRAHAHKGRGAGKLVIQARTRAQKG--GKGEETR 118
Query: 171 RGQTGHGFVSSLTAWGRRPRAGQLGPCANCPGAHSRP 207
RG G S+ +GR P A + GP A GA + P
Sbjct: 119 RGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAP 155
>gi|187960059 syndecan 3 [Homo sapiens]
Length = 442
Score = 32.7 bits (73), Expect = 0.50
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 8/112 (7%)
Query: 52 TQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFLS 111
T P A T R+ +P A+A T A T A + + P P L
Sbjct: 190 TPAAPPFTATTAVIRTTGVRRLLPLPLTTVATARATTPEAPSPPTTAAVLDTEAPTPRLV 249
Query: 112 LEAAARPEAIAGLTQCTAHGEPHFPESS--PCGTNVP---EAANRRHPKTTL 158
A +RP A L + EP PE S P GT P E A P+T L
Sbjct: 250 STATSRPRA---LPRPATTQEPDIPERSTLPLGTTAPGPTEVAQTPTPETFL 298
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 32.3 bits (72), Expect = 0.66
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 751
Score = 32.0 bits (71), Expect = 0.86
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 791
Score = 31.6 bits (70), Expect = 1.1
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAE 871
Score = 30.8 bits (68), Expect = 1.9
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 831
Score = 29.6 bits (65), Expect = 4.3
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
P P E ++ P+ +A T + E
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAE 671
Score = 29.6 bits (65), Expect = 4.3
Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + ++ P+ +A T + E
Sbjct: 865 PVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAE 911
Score = 29.6 bits (65), Expect = 4.3
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 845 PLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 904
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 905 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 951
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 32.3 bits (72), Expect = 0.66
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 751
Score = 32.3 bits (72), Expect = 0.66
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 825 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAE 871
Score = 32.0 bits (71), Expect = 0.86
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 791
Score = 31.2 bits (69), Expect = 1.5
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 831
Score = 30.0 bits (66), Expect = 3.3
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAEEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
P P E ++ P+ +A T + E
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAE 671
Score = 29.3 bits (64), Expect = 5.6
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 865 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 911
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 32.3 bits (72), Expect = 0.66
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 751
Score = 32.0 bits (71), Expect = 0.86
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 791
Score = 31.6 bits (70), Expect = 1.1
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAE 871
Score = 30.8 bits (68), Expect = 1.9
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 831
Score = 29.6 bits (65), Expect = 4.3
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
P P E ++ P+ +A T + E
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAE 671
Score = 29.3 bits (64), Expect = 5.6
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 865 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 911
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 32.3 bits (72), Expect = 0.66
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 751
Score = 32.0 bits (71), Expect = 0.86
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 791
Score = 31.6 bits (70), Expect = 1.1
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAE 871
Score = 30.8 bits (68), Expect = 1.9
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 831
Score = 29.6 bits (65), Expect = 4.3
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
P P E ++ P+ +A T + E
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAE 671
Score = 29.6 bits (65), Expect = 4.3
Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + ++ P+ +A T + E
Sbjct: 865 PVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAE 911
Score = 29.6 bits (65), Expect = 4.3
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 845 PLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 904
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 905 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 951
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 32.3 bits (72), Expect = 0.66
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 751
Score = 32.0 bits (71), Expect = 0.86
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
L + A E +T P P + ++ P+ +A T + E
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 791
Score = 31.6 bits (70), Expect = 1.1
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAE 871
Score = 30.8 bits (68), Expect = 1.9
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ + A E +T P P + ++ P+ +A T + E
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAE 831
Score = 29.6 bits (65), Expect = 4.3
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
P P E ++ P+ +A T + E
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAE 671
Score = 29.3 bits (64), Expect = 5.6
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFLSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 865 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 911
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 32.3 bits (72), Expect = 0.66
Identities = 34/138 (24%), Positives = 47/138 (34%), Gaps = 16/138 (11%)
Query: 76 QAPRARASADLTRRVAGERVTAADLRERH---CPKPFLSLEAAARPEAIAGLTQCTAHGE 132
Q P A ++ V DL+ +H P P PEA+ + E
Sbjct: 859 QVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMPEAVPEVAS-----E 913
Query: 133 PHFPESSPCG---TNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRP 189
P +S T P HP+ + + L C G G V+++T GR P
Sbjct: 914 PGLESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCP-----ASCGSGVVTTVTVSGRDP 968
Query: 190 RAGQLGPCANCPGAHSRP 207
R C A SRP
Sbjct: 969 RTAPSSSCTAVASAASRP 986
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 32.3 bits (72), Expect = 0.66
Identities = 34/138 (24%), Positives = 47/138 (34%), Gaps = 16/138 (11%)
Query: 76 QAPRARASADLTRRVAGERVTAADLRERH---CPKPFLSLEAAARPEAIAGLTQCTAHGE 132
Q P A ++ V DL+ +H P P PEA+ + E
Sbjct: 859 QVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMPEAVPEVAS-----E 913
Query: 133 PHFPESSPCG---TNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRP 189
P +S T P HP+ + + L C G G V+++T GR P
Sbjct: 914 PGLESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCP-----ASCGSGVVTTVTVSGRDP 968
Query: 190 RAGQLGPCANCPGAHSRP 207
R C A SRP
Sbjct: 969 RTAPSSSCTAVASAASRP 986
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 32.0 bits (71), Expect = 0.86
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 14/120 (11%)
Query: 110 LSLEAAARPEAIAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLV 169
L + ++RP A G + G+P + P G+ + + R P+ T +
Sbjct: 824 LRQQTSSRPPASVGELSSSGLGDPRLQKGHPTGSRLADPRLSRDPRLT--------RHVE 875
Query: 170 RRGQTGHGFVSSLTAWGRRPRAGQLGPCANCPGA-HSRPLVNDTTRNQGTPSTYKGHGAR 228
G +G G + PR + P + G+ HS P+ +++ G P T + G R
Sbjct: 876 ASGGSGPG-----DSGPSDPRLARALPTSKPEGSLHSSPVGPSSSKGSGPPPTEEEEGER 930
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 32.0 bits (71), Expect = 0.86
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
Query: 108 PFLSLEAAARPEAIAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTLPKGLCGCAD 167
P+L +++AA+ A + + +P P SPC P A L G A
Sbjct: 1236 PYLHVDSAAQRGAEDSGVKAVSSADPRAPGESPCPVGEPPLALENAASLKLFAG--SLAP 1293
Query: 168 LVRRGQTGHGFVSSLTAWGRRPRAGQL-GPCANCPGAHSRPLVNDTTRNQGTPSTYKGHG 226
L++ G G G + ++ A P+A GP + P PL+ + G G
Sbjct: 1294 LLQPGAAG-GEIPAVQASSGSPKARTTEGPVDSMPCLDRMPLLAKGKQATGEEKAATAPG 1352
Query: 227 ARTK 230
A K
Sbjct: 1353 AGAK 1356
>gi|239755142 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 31.6 bits (70), Expect = 1.1
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 37 ARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRRVAGE 93
AR+C RP ++ L+ A RSP +G T +P AR +AD R A E
Sbjct: 111 ARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAE 167
>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
sapiens]
Length = 533
Score = 31.6 bits (70), Expect = 1.1
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 28 PAFTRLNRKARKCPRPRP----WSNRARTQGLSPAVAATHTCRSPQQGLTV--PQAPRAR 81
PA ++ R+AR PRPR W +R L+P + H +S L + P R R
Sbjct: 4 PASRQVRRRARAAPRPRSAEDWWWDR-----LAPRGSGYHLLQSDSMLLVLSEPGPARPR 58
Query: 82 ASADLTRRVAGERVTAADLRERHCPKPFLSLEAAARP 118
A +RR + + PK L EAAA P
Sbjct: 59 AQRRASRRTPRQPPRGPSAAAK--PKAGLRSEAAAAP 93
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 31.6 bits (70), Expect = 1.1
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 28 PAFTRLNRKARKCPRPRP----WSNRARTQGLSPAVAATHTCRSPQQGLTV--PQAPRAR 81
PA ++ R+AR PRPR W +R L+P + H +S L + P R R
Sbjct: 4 PASRQVRRRARAAPRPRSAEDWWWDR-----LAPRGSGYHLLQSDSMLLVLSEPGPARPR 58
Query: 82 ASADLTRRVAGERVTAADLRERHCPKPFLSLEAAARP 118
A +RR + + PK L EAAA P
Sbjct: 59 AQRRASRRTPRQPPRGPSAAAK--PKAGLRSEAAAAP 93
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 31.2 bits (69), Expect = 1.5
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 17/125 (13%)
Query: 106 PKPFLSLEAAARPEAIAGLTQ---CTAHGEPHFPESSPCGTNVPEAANRRH----PKTTL 158
P+P ++P+ +G Q T +P FP SP +P A + P+
Sbjct: 3710 PRPGTKTGGGSQPQPASGQLQSETATTPAKPSFPSRSPAPERLPARAQAKSCTKGPREAG 3769
Query: 159 PKGLCGCADLVRRGQTGHGFVSSLTAWGRRP---RAGQLGPCANCPGAHSRPLVNDTTRN 215
+G G +G++ S+ G+ P R+ +G P A +P T R
Sbjct: 3770 EQGPHGSLGPKEKGES-----STKRKKGQVPGPARSESVGSFGRAPSAPDKP--PRTPRK 3822
Query: 216 QGTPS 220
Q TPS
Sbjct: 3823 QATPS 3827
Score = 29.3 bits (64), Expect = 5.6
Identities = 55/215 (25%), Positives = 71/215 (33%), Gaps = 34/215 (15%)
Query: 1 MEKHTAGVCSRAHFALTTVPR-------GRRRHHPAFTRLNRKARKCPRPRPWSNRARTQ 53
M KH G R FA V R R ++ R A P P +R +
Sbjct: 3409 MNKHLRG--GRQPFAFRGVRRPGAPGQKARALEGTLPSKRRRVAMPGSAPGPGEDRPPPR 3466
Query: 54 GLSPAV------AATHTCRSPQQGLTVPQAPRARASAD-LTRRVAGERVTAADLRERHCP 106
G SP + A H C T D +T + G + + + CP
Sbjct: 3467 GSSPILSEGSLPALLHLCSEVAPSTTKGWPETLERPVDPVTHPIRGCELPS---NHQECP 3523
Query: 107 KPFLSLEAAARPEAIAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTLPKGLCGCA 166
P LS AA + G C G PE+ A+ P L + L A
Sbjct: 3524 PPSLSPFPAALAD---GRGDCALDGALERPENE---------ASPGSPGPLLQQALPLGA 3571
Query: 167 DLVR---RGQTGHGFVSSLTAWGRRPRAGQLGPCA 198
L R RGQ G + L G+R G G CA
Sbjct: 3572 SLPRPGARGQDAEGKRAPLVFSGKRRAPGARGRCA 3606
>gi|193083163 roundabout, axon guidance receptor, homolog 2 isoform
ROBO2a [Homo sapiens]
Length = 1394
Score = 31.2 bits (69), Expect = 1.5
Identities = 55/233 (23%), Positives = 80/233 (34%), Gaps = 38/233 (16%)
Query: 19 VPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGL----SPAVAATHTCRSPQQGLTV 74
V +GR P T+ N P+P + + +Q L P + SP LT+
Sbjct: 341 VAQGRTVTFPCETKGN------PQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTI 394
Query: 75 PQAPRARASADLTRR--VAGERVTAADLRERHC----PKPFLSLEAAARPEAIAG--LTQ 126
R+ A + + VAG + A L P P + A + A+ G L +
Sbjct: 395 TNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLK 454
Query: 127 CTAHGEP-----------HFPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTG 175
C A G+P FP P T + + G C G+T
Sbjct: 455 CKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETS 514
Query: 176 HGFVSSLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQ-------GTPST 221
V +T G ++ PG S+P V D T+N GTP T
Sbjct: 515 WSAVLDVTESGATISKNY--DLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGT 565
>gi|61888896 roundabout, axon guidance receptor, homolog 2 isoform
ROBO2b [Homo sapiens]
Length = 1378
Score = 31.2 bits (69), Expect = 1.5
Identities = 55/233 (23%), Positives = 80/233 (34%), Gaps = 38/233 (16%)
Query: 19 VPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGL----SPAVAATHTCRSPQQGLTV 74
V +GR P T+ N P+P + + +Q L P + SP LT+
Sbjct: 325 VAQGRTVTFPCETKGN------PQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTI 378
Query: 75 PQAPRARASADLTRR--VAGERVTAADLRERHC----PKPFLSLEAAARPEAIAG--LTQ 126
R+ A + + VAG + A L P P + A + A+ G L +
Sbjct: 379 TNIQRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLK 438
Query: 127 CTAHGEP-----------HFPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTG 175
C A G+P FP P T + + G C G+T
Sbjct: 439 CKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETS 498
Query: 176 HGFVSSLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQ-------GTPST 221
V +T G ++ PG S+P V D T+N GTP T
Sbjct: 499 WSAVLDVTESGATISKNY--DLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGT 549
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.132 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,017,879
Number of Sequences: 37866
Number of extensions: 820609
Number of successful extensions: 2472
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 2351
Number of HSP's gapped (non-prelim): 158
length of query: 352
length of database: 18,247,518
effective HSP length: 103
effective length of query: 249
effective length of database: 14,347,320
effective search space: 3572482680
effective search space used: 3572482680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.