Guide to the Human Genome
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Search of human proteins with 239751700

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751700 PREDICTED: hypothetical protein XP_002347968 [Homo
sapiens]
         (215 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757193 PREDICTED: hypothetical protein [Homo sapiens]           454   e-128
gi|239751700 PREDICTED: hypothetical protein XP_002347968 [Homo ...   454   e-128
gi|239746204 PREDICTED: hypothetical protein XP_002343661 [Homo ...   410   e-115
gi|55956899 keratin 9 [Homo sapiens]                                   33   0.14 
gi|15718767 TRAAK [Homo sapiens]                                       33   0.14 
gi|148664184 solute carrier family 22, member 10 [Homo sapiens]        31   0.91 
gi|52218848 olfactory receptor, family 10, subfamily Q, member 1...    31   0.91 
gi|52317194 olfactory receptor, family 2, subfamily D, member 3 ...    30   1.2  
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo...    30   1.2  
gi|4557595 forkhead box F2 [Homo sapiens]                              30   1.5  
gi|28376633 klotho beta [Homo sapiens]                                 30   1.5  
gi|239745230 PREDICTED: hypothetical protein XP_002343393 [Homo ...    30   2.0  
gi|95089461 discs large homolog 5 [Homo sapiens]                       30   2.0  
gi|58218998 hypothetical protein LOC340204 [Homo sapiens]              30   2.0  
gi|58219064 Src homology 2 domain containing E [Homo sapiens]          29   2.6  
gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo ...    29   3.5  
gi|31791024 keratin associated protein 19-6 [Homo sapiens]             29   3.5  
gi|239753158 PREDICTED: hypothetical protein XP_002345577 [Homo ...    28   4.5  
gi|239747728 PREDICTED: hypothetical protein XP_002348255 [Homo ...    28   4.5  
gi|239741594 PREDICTED: hypothetical protein XP_002342244 [Homo ...    28   4.5  
gi|21704283 junctophilin 3 [Homo sapiens]                              28   4.5  
gi|22748877 basic helix-loop-helix domain containing, class B, 5...    28   4.5  
gi|15147219 purine-rich element binding protein B [Homo sapiens]       28   4.5  
gi|153792074 proline rich 12 [Homo sapiens]                            28   4.5  
gi|148664228 hypothetical protein LOC158293 [Homo sapiens]             28   4.5  
gi|239752681 PREDICTED: hypothetical protein [Homo sapiens]            28   5.9  
gi|239747218 PREDICTED: hypothetical protein XP_002346942 [Homo ...    28   5.9  
gi|239741026 PREDICTED: hypothetical protein XP_002342071 [Homo ...    28   5.9  
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]                    28   5.9  
gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Hom...    28   5.9  

>gi|239757193 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 397

 Score =  454 bits (1169), Expect = e-128
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL 60
           MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL
Sbjct: 183 MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL 242

Query: 61  EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL 120
           EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL
Sbjct: 243 EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL 302

Query: 121 QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT 180
           QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT
Sbjct: 303 QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT 362

Query: 181 GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV 215
           GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV
Sbjct: 363 GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV 397


>gi|239751700 PREDICTED: hypothetical protein XP_002347968 [Homo
           sapiens]
          Length = 215

 Score =  454 bits (1169), Expect = e-128
 Identities = 215/215 (100%), Positives = 215/215 (100%)

Query: 1   MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL 60
           MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL
Sbjct: 1   MAVSPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRL 60

Query: 61  EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL 120
           EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL
Sbjct: 61  EPGGPGTSVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVL 120

Query: 121 QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT 180
           QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT
Sbjct: 121 QRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGT 180

Query: 181 GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV 215
           GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV
Sbjct: 181 GIGPGSGGQRCGSESYAAPQSLHCTDSPHCRSLSV 215


>gi|239746204 PREDICTED: hypothetical protein XP_002343661 [Homo
           sapiens]
          Length = 194

 Score =  410 bits (1054), Expect = e-115
 Identities = 193/194 (99%), Positives = 193/194 (99%)

Query: 22  MTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRLEPGGPGTSVFFLNSPFPARNV 81
           MTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRLEPGGPGTSVFFLNSPFPARNV
Sbjct: 1   MTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRLEPGGPGTSVFFLNSPFPARNV 60

Query: 82  QPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQVILFLLFLLLFLLT 141
           QPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQVILFLLFLLLFLLT
Sbjct: 61  QPLFWGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQVILFLLFLLLFLLT 120

Query: 142 LCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQS 201
           LCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSESY APQS
Sbjct: 121 LCILNPIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSESYTAPQS 180

Query: 202 LHCTDSPHCRSLSV 215
           LHCTDSPHCRSLSV
Sbjct: 181 LHCTDSPHCRSLSV 194


>gi|55956899 keratin 9 [Homo sapiens]
          Length = 623

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 156 RWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSG-GQRCGS 193
           R   GG +GRG RG S   +  GG+G G G G G R GS
Sbjct: 478 RGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGS 516


>gi|15718767 TRAAK [Homo sapiens]
          Length = 393

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 101 LSGQGPRLLSLLRRGLSH---VLQRWQLTQVILFLLFLLLFLLTLCIL 145
           L+G G RL S LR G+ H   +  +W +   ++ +L  +LFLL  C+L
Sbjct: 135 LAGVGDRLGSSLRHGIGHIEAIFLKWHVPPELVRVLSAMLFLLIGCLL 182


>gi|148664184 solute carrier family 22, member 10 [Homo sapiens]
          Length = 541

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 13/46 (28%), Positives = 26/46 (56%)

Query: 115 GLSHVLQRWQLTQVILFLLFLLLFLLTLCILNPIQYLEVLERWDPG 160
           GL++V + WQ   V+  + F + FLL+  ++   ++L +  + D G
Sbjct: 250 GLAYVFRDWQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEG 295


>gi|52218848 olfactory receptor, family 10, subfamily Q, member 1
           [Homo sapiens]
          Length = 319

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 13/17 (76%), Positives = 16/17 (94%)

Query: 127 QVILFLLFLLLFLLTLC 143
           QV+LFLLFLLL+L+ LC
Sbjct: 28  QVLLFLLFLLLYLMILC 44


>gi|52317194 olfactory receptor, family 2, subfamily D, member 3
           [Homo sapiens]
          Length = 330

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 4/28 (14%)

Query: 115 GLSHVLQRWQLTQVILFLLFLLLFLLTL 142
           GLS  LQ    TQ++LF+LFL+++LLT+
Sbjct: 32  GLSQDLQ----TQILLFILFLIIYLLTV 55


>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
            sapiens]
          Length = 1802

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 6/40 (15%)

Query: 156  RWDPGGQW-----GRGLRGFSTRCHAAGGT-GIGPGSGGQ 189
            RW   G+W     GRG RG  +R    GGT G G G GG+
Sbjct: 1675 RWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGR 1714


>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 171 STRCHAAGGTGIGPGSGGQRCGSESYAAPQ 200
           S  C +AGG G G GSGG +  S     P+
Sbjct: 70  SAACKSAGGGGAGAGSGGAKKASSGLRRPE 99


>gi|28376633 klotho beta [Homo sapiens]
          Length = 1044

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 68  SVFFLNSPFPARNVQPLFWGRGWGGLGLHGSKELSGQGPRL 108
           S  FL   FP       FWG G G L + GS +  G+GP +
Sbjct: 73  SQLFLYDTFPKN----FFWGIGTGALQVEGSWKKDGKGPSI 109


>gi|239745230 PREDICTED: hypothetical protein XP_002343393 [Homo
           sapiens]
          Length = 122

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 166 GLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCR 211
           G R   T C   GG  +GP  GG   G    A  Q +H  ++P CR
Sbjct: 15  GNRRTKTICPFPGGMQLGPSQGGSSRG----ALEQLMHGYNAPFCR 56


>gi|95089461 discs large homolog 5 [Homo sapiens]
          Length = 1919

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 56  LTGRLEPGGPGTSVFFLNSPFPARNVQ 82
           L  R EPG PG S  FL+ PFP   +Q
Sbjct: 852 LEDRKEPGPPGGSSSFLHKPFPGGPLQ 878


>gi|58218998 hypothetical protein LOC340204 [Homo sapiens]
          Length = 121

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)

Query: 119 VLQRWQLTQVILFLLFLLLFLLTLCILNPIQY 150
           +L +W L   +LFLLF  LFLLT   L+P +Y
Sbjct: 2   MLPQWLL---LLFLLFFFLFLLTRGSLSPTKY 30


>gi|58219064 Src homology 2 domain containing E [Homo sapiens]
          Length = 495

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 147 PIQYLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSE 194
           P+    V ER  PGG  G+ LR  S     AGG G GPG G +   +E
Sbjct: 46  PLNLKTVSERAKPGGGGGK-LRKNSE----AGGAGPGPGKGRKNSAAE 88


>gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
           sapiens]
          Length = 1386

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 164 GRGLRGFSTRCHAAGGTGIGPGSGG 188
           GRG R  +++ H +GG G G G GG
Sbjct: 23  GRGGRSHASKSHGSGGGGGGGGGGG 47


>gi|31791024 keratin associated protein 19-6 [Homo sapiens]
          Length = 58

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/31 (45%), Positives = 15/31 (48%)

Query: 163 WGRGLRGFSTRCHAAGGTGIGPGSGGQRCGS 193
           +G   RG    C   GG G G G GG R GS
Sbjct: 4   YGSYYRGLGYGCGGFGGLGYGCGCGGYRYGS 34


>gi|239753158 PREDICTED: hypothetical protein XP_002345577 [Homo
           sapiens]
          Length = 342

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 8/54 (14%)

Query: 88  RGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQV-ILFLLFLLLFLL 140
           RG GG G  G     G+G       + G    LQ  QL QV +L LLFLLLF L
Sbjct: 218 RGDGGSGRQGGGGHWGRG-------QPGGGLPLQHLQLLQVFVLVLLFLLLFFL 264


>gi|239747728 PREDICTED: hypothetical protein XP_002348255 [Homo
           sapiens]
          Length = 342

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 8/54 (14%)

Query: 88  RGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQV-ILFLLFLLLFLL 140
           RG GG G  G     G+G       + G    LQ  QL QV +L LLFLLLF L
Sbjct: 218 RGDGGSGRQGGGGHWGRG-------QPGGGLPLQHLQLLQVFVLVLLFLLLFFL 264


>gi|239741594 PREDICTED: hypothetical protein XP_002342244 [Homo
           sapiens]
          Length = 342

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 8/54 (14%)

Query: 88  RGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQRWQLTQV-ILFLLFLLLFLL 140
           RG GG G  G     G+G       + G    LQ  QL QV +L LLFLLLF L
Sbjct: 218 RGDGGSGRQGGGGHWGRG-------QPGGGLPLQHLQLLQVFVLVLLFLLLFFL 264


>gi|21704283 junctophilin 3 [Homo sapiens]
          Length = 748

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 161 GQWGRGLR-GFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSL 202
           G W  GL+ G+ T  ++ GGT  G   GG R G   Y   QS+
Sbjct: 109 GTWSNGLQDGYGTETYSDGGTYQGQWVGGMRQG---YGVRQSV 148


>gi|22748877 basic helix-loop-helix domain containing, class B, 5
           [Homo sapiens]
          Length = 381

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 159 PGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSES 195
           PGG  G G  G S+   + GG G G GSGG    S S
Sbjct: 197 PGGLGGGG-GGGSSSGSSGGGGGSGSGSGGSSSSSSS 232


>gi|15147219 purine-rich element binding protein B [Homo sapiens]
          Length = 312

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 150 YLEVLERWDPGGQWGRGLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSL 202
           YL++ E      Q GR LR   T     GG G GPG GG + G       Q L
Sbjct: 132 YLDLKEN-----QRGRFLRIRQTVNRGGGGFGAGPGPGGLQSGQTIALPAQGL 179


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 16/64 (25%)

Query: 166 GLRGFSTRCHAAGGTGIGPGSGGQR---------CGSESYAA-------PQSLHCTDSPH 209
           G  G +T   AAGG G G G GG R          G   Y A       P     T +P 
Sbjct: 357 GASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPK 416

Query: 210 CRSL 213
           C+SL
Sbjct: 417 CQSL 420


>gi|148664228 hypothetical protein LOC158293 [Homo sapiens]
          Length = 256

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 14/37 (37%), Positives = 16/37 (43%)

Query: 86  WGRGWGGLGLHGSKELSGQGPRLLSLLRRGLSHVLQR 122
           W R W   GLH    +   GP  LS  R G +   QR
Sbjct: 40  WRRAWAARGLHPRPSILQPGPARLSRARAGGTRCPQR 76


>gi|239752681 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 286

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 166 GLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCRS 212
           G  G  TRC     T  GP  G + CGS   A P    C D   CRS
Sbjct: 170 GCAGAVTRCLPRRRTVRGPACGDRLCGSCDGAFPGGGQCGDR-LCRS 215


>gi|239747218 PREDICTED: hypothetical protein XP_002346942 [Homo
           sapiens]
          Length = 244

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 166 GLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCRS 212
           G  G  TRC     T  GP  G + CGS   A P    C D   CRS
Sbjct: 128 GCAGAVTRCLPRRRTVRGPACGDRLCGSCDGAFPGGGQCGDR-LCRS 173


>gi|239741026 PREDICTED: hypothetical protein XP_002342071 [Homo
           sapiens]
          Length = 455

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 166 GLRGFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSLHCTDSPHCRS 212
           G  G  TRC     T  GP  G + CGS   A P    C D   CRS
Sbjct: 339 GCAGAVTRCLPRWRTVRGPACGDRLCGSCDGAFPGGGQCGDR-LCRS 384


>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
          Length = 696

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 161 GQWGRGLR-GFSTRCHAAGGTGIGPGSGGQRCGSESYAAPQSL 202
           G W  GL+ G+ T  +A GGT  G  + G R G   Y   QS+
Sbjct: 108 GTWNNGLQDGYGTETYADGGTYQGQFTNGMRHG---YGVRQSV 147


>gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Homo
            sapiens]
          Length = 2063

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 4    SPTSMSGTLRSRAWARTWMTSQSPRVNTSSGSSCTRVPFSSDVCRCTVTTWPLTGRLEPG 63
            S  S SGTL+S+A +R+ ++S      T S    T    SS+  +      PL+G   PG
Sbjct: 1643 SSPSPSGTLQSQA-SRSTISSSFGNEETPSSKEATAETTSSEEEQ-EPGFLPLSGSFGPG 1700

Query: 64   GP-GTS 68
            GP GTS
Sbjct: 1701 GPCGTS 1706


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.463 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,224,073
Number of Sequences: 37866
Number of extensions: 538981
Number of successful extensions: 2317
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2273
Number of HSP's gapped (non-prelim): 55
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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