Guide to the Human Genome
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Name: FAM120AOS Sequence: fasta or formatted (256aa) NCBI GI: 148664228
Description:

hypothetical protein LOC158293

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         26           2
 C cysteine            3.5          9           2
 D aspartate           2.0          5           3
 E glutamate           0.8          2           1
 F phenylalanine       2.3          6           1
 G glycine             9.0         23           3
 H histidine           2.0          5           1
 I isoleucine          3.1          8           1
 K lysine              5.5         14           2
 L leucine             8.6         22           2
 M methionine          2.0          5           1
 N asparagine          2.3          6           2
 P proline             9.4         24           2
 Q glutamine           3.5          9           1
 R arginine           12.1         31           2
 S serine              9.8         25           2
 T threonine           7.0         18           2
 V valine              3.5          9           1
 W tryptophan          3.5          9           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC158293 
LOC100287514          0.023   PREDICTED: hypothetical protein XP_002343754 
LOC100293501          0.016   PREDICTED: hypothetical protein 
LOC100291178          0.016   PREDICTED: hypothetical protein XP_002347544 
LOC100289466          0.016   PREDICTED: hypothetical protein XP_002342181 
ZNF469                0.016   zinc finger protein 469 
LOC100294040          0.014   PREDICTED: hypothetical protein 
LOC100291391          0.014   PREDICTED: hypothetical protein XP_002346653 
LOC100289402          0.014   PREDICTED: hypothetical protein XP_002342490 
ZNF628                0.014   zinc finger protein 628 
LOC100287920          0.014   PREDICTED: hypothetical protein XP_002344198 
LOC100286968          0.014   PREDICTED: hypothetical protein XP_002343626 
LOC100292612          0.014   PREDICTED: hypothetical protein 
KIAA0649              0.014   1A6/DRIM (down-regulated in metastasis) interacting ...
C9orf66               0.012   hypothetical protein LOC157983 
LOC100290397          0.012   PREDICTED: hypothetical protein XP_002348309, parti...
BBC3                  0.012   BCL2 binding component 3 isoform 1 
CDAN1                 0.012   codanin 1 
CD6                   0.010   CD6 molecule 
LOC100292184          0.010   PREDICTED: hypothetical protein 
LOC100288963          0.010   PREDICTED: hypothetical protein XP_002342546 
SPEG                  0.010   SPEG complex locus 
LOC100127891          0.010   PREDICTED: hypothetical protein 
LOC100293212          0.010   PREDICTED: hypothetical protein 
LOC100289796          0.010   PREDICTED: hypothetical protein XP_002346485 
LOC100288812          0.010   PREDICTED: hypothetical protein XP_002342329 
LOC100291835          0.010   PREDICTED: hypothetical protein XP_002346266 
LOC100293385          0.010   PREDICTED: hypothetical protein 
LOC100290381          0.010   PREDICTED: hypothetical protein XP_002346884 
LOC100289601          0.010   PREDICTED: hypothetical protein XP_002342725 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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