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Search of human proteins with 239751316
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751316 PREDICTED: hypothetical protein XP_002347803 [Homo
sapiens]
(317 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751316 PREDICTED: hypothetical protein XP_002347803 [Homo ... 647 0.0
gi|239745815 PREDICTED: hypothetical protein XP_002343596 [Homo ... 647 0.0
gi|239756835 PREDICTED: hypothetical protein [Homo sapiens] 501 e-142
gi|209862789 microtubule associated monoxygenase, calponin and L... 38 0.014
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 33 0.33
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 33 0.33
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 32 0.74
gi|239757695 PREDICTED: hypothetical protein XP_002345523 [Homo ... 32 0.97
gi|239752180 PREDICTED: hypothetical protein [Homo sapiens] 32 0.97
gi|239746703 PREDICTED: hypothetical protein XP_002343814 [Homo ... 32 0.97
gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo ... 31 1.3
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens] 31 1.3
gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo ... 31 1.3
gi|42766424 hypothetical protein LOC389119 [Homo sapiens] 31 1.3
gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens] 31 1.3
gi|83367077 mucin 16 [Homo sapiens] 31 1.7
gi|82546879 GTP binding protein 1 [Homo sapiens] 31 1.7
gi|116006967 neuregulin 1 isoform GGF2 [Homo sapiens] 30 2.2
gi|102469037 jun D proto-oncogene [Homo sapiens] 30 2.8
gi|169202775 PREDICTED: hypothetical protein [Homo sapiens] 30 2.8
gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens] 30 2.8
gi|169160607 PREDICTED: hypothetical protein LOC100128071 [Homo ... 30 2.8
gi|89034573 PREDICTED: hypothetical protein [Homo sapiens] 30 2.8
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 30 2.8
gi|169161545 PREDICTED: hypothetical protein LOC100128071 [Homo ... 30 2.8
gi|89033790 PREDICTED: hypothetical protein [Homo sapiens] 30 2.8
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 30 2.8
gi|169161248 PREDICTED: hypothetical protein LOC100128071 [Homo ... 30 2.8
gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens] 30 2.8
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 30 3.7
>gi|239751316 PREDICTED: hypothetical protein XP_002347803 [Homo
sapiens]
Length = 317
Score = 647 bits (1668), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD
Sbjct: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
Query: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR
Sbjct: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
Query: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP
Sbjct: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
Query: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL
Sbjct: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
Query: 241 GFRRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDR 300
GFRRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDR
Sbjct: 241 GFRRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDR 300
Query: 301 PRGRSPPLCPQRYLRPR 317
PRGRSPPLCPQRYLRPR
Sbjct: 301 PRGRSPPLCPQRYLRPR 317
>gi|239745815 PREDICTED: hypothetical protein XP_002343596 [Homo
sapiens]
Length = 317
Score = 647 bits (1668), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD
Sbjct: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
Query: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR
Sbjct: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
Query: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP
Sbjct: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
Query: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL
Sbjct: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
Query: 241 GFRRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDR 300
GFRRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDR
Sbjct: 241 GFRRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDR 300
Query: 301 PRGRSPPLCPQRYLRPR 317
PRGRSPPLCPQRYLRPR
Sbjct: 301 PRGRSPPLCPQRYLRPR 317
>gi|239756835 PREDICTED: hypothetical protein [Homo sapiens]
Length = 386
Score = 501 bits (1291), Expect = e-142
Identities = 267/335 (79%), Positives = 272/335 (81%), Gaps = 25/335 (7%)
Query: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD
Sbjct: 1 MRTRAGMPPDLKMASSPSRWWERLCRMLVVQRAVSRSLVFCMVRTTAATSWGEPIRARRD 60
Query: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR
Sbjct: 61 ASFFDSWFTIMAALVTTTWRFGELGQGASGQLGIVLVVDEMHNGRLEQLGRLGQSLQVSR 120
Query: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP
Sbjct: 121 RGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAP 180
Query: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL
Sbjct: 181 EWIPESLGLPKEASPLWLAAPGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL 240
Query: 241 GFRRKTLTSNLWFAE---------------------LRGALGPNRATPKSPRPGPQRAPC 279
GFRRKTLTS + +RGA R P+ P+ R P
Sbjct: 241 GFRRKTLTSRKRVGKVCAGLQKACTFTIQKSNGRSLVRGAPRRARPEPRDPQVAAPRTPA 300
Query: 280 RRCRVALDGTGPHLPRDGWDR----PRGRSPPLCP 310
R G H P R PR + PL P
Sbjct: 301 RPLPPVQGGARWHRPSPAQGRLGPAPRPLATPLSP 335
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 37.7 bits (86), Expect = 0.014
Identities = 52/168 (30%), Positives = 63/168 (37%), Gaps = 27/168 (16%)
Query: 158 PTNASSSSMMPLLLTEGTQVLAPEWIPESLGLPK-EASPLWLAAPGRNLLQTTGSLADTV 216
P + S S+ EG +L P IP+ LGLPK E PL L P
Sbjct: 1360 PVSLKSYSVEKSPQDEGLHLLKPLSIPKRLGLPKPEGEPLSLPTPR-------------- 1405
Query: 217 VSISKLVHSKRAELKQELSDKLVLGF-----RRKTLTSNLWFAELRGALGPNRATPKSPR 271
S S E ++ELS LG KTL S + L P + P P
Sbjct: 1406 -SPSDRELRSAQEERRELSSSSGLGLHGSSSNMKTLGSQSFNTSDSAMLTPPSSPPPPPP 1464
Query: 272 PGPQRAPCRR-CRVALDGTG---PHLPRDGWDRPRGRSPPLCPQRYLR 315
PG + A RR R A P LP W RP R P P+ +R
Sbjct: 1465 PGEEPATLRRKLREAEPNASVVPPPLPAT-WMRP-PREPAQPPREEVR 1510
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 22/139 (15%)
Query: 141 LPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQVLAPEWIPESLGLPKEASPLWLAA 200
LP+ + PG P P AS+ PL + Q +P P P A
Sbjct: 1230 LPEARTPVSPGSPQPQPPVAASTPPPSPLPICSQPQPSTEATVPSPTQSPIRFQP----A 1285
Query: 201 PGRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLVL--GFRRKTLTSNLWF--AEL 256
P A T ++ L +++ K L L + RR L W AE+
Sbjct: 1286 P-----------AKTSTPLAPLPVQSQSDTKDRLGSPLAVDEALRRSDLVEEFWMKSAEI 1334
Query: 257 RGALGPNRATPKSPRPGPQ 275
R +LG TP GP+
Sbjct: 1335 RRSLG---LTPVDRSKGPE 1350
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 33.1 bits (74), Expect = 0.33
Identities = 42/165 (25%), Positives = 57/165 (34%), Gaps = 31/165 (18%)
Query: 132 ALRLDTYTPLPKGESLGVPGGYG-------PGSPTNASSSSMMPLLLTEGTQVLAPEWIP 184
ALR + L +G G PGG G P + S +LL + W+P
Sbjct: 400 ALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVP 459
Query: 185 ESLG----------LPKEASPLWLAAPGRNLLQTTG-SLADTVVSISKLVHSKRAELKQE 233
G P+ SP AAP + + + L T SI + + +Q+
Sbjct: 460 RGRGSGGSGRSTPQTPRARSP---AAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQ 516
Query: 234 LSDKLVLGFRRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAP 278
L FRR + A R TP P P P RAP
Sbjct: 517 L-------FRR---LEEEFLANARALEAVASVTPTGPAPDPARAP 551
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 33.1 bits (74), Expect = 0.33
Identities = 42/165 (25%), Positives = 57/165 (34%), Gaps = 31/165 (18%)
Query: 132 ALRLDTYTPLPKGESLGVPGGYG-------PGSPTNASSSSMMPLLLTEGTQVLAPEWIP 184
ALR + L +G G PGG G P + S +LL + W+P
Sbjct: 400 ALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVP 459
Query: 185 ESLG----------LPKEASPLWLAAPGRNLLQTTG-SLADTVVSISKLVHSKRAELKQE 233
G P+ SP AAP + + + L T SI + + +Q+
Sbjct: 460 RGRGSGGSGRSTPQTPRARSP---AAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQ 516
Query: 234 LSDKLVLGFRRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAP 278
L FRR + A R TP P P P RAP
Sbjct: 517 L-------FRR---LEEEFLANARALEAVASVTPTGPAPDPARAP 551
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 32.0 bits (71), Expect = 0.74
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 15/105 (14%)
Query: 139 TPLPKGESLGVPGGYGPGSPTNASSSSMMPLLLTEGTQ-------VLAPEWIPESLGLPK 191
TP P G SL + P PT +++ ++ +++ + + LAP P S GLP
Sbjct: 1283 TPAPTGLSLPLAANQVP--PTMVNNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPA 1340
Query: 192 EASPLWLAAPGRNLLQTTGS------LADTVVSISKLVHSKRAEL 230
+P PGR T G+ V + KLVHS E+
Sbjct: 1341 VLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSPEV 1385
>gi|239757695 PREDICTED: hypothetical protein XP_002345523 [Homo
sapiens]
Length = 236
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 259 ALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDRPRGRSPPL 308
AL P+ TP P R+ C CR A+ GT PH W GR P L
Sbjct: 47 ALAPS--TPFGDTLSPGRSTCPACRSAVAGTHPH-----WGGSGGRLPAL 89
>gi|239752180 PREDICTED: hypothetical protein [Homo sapiens]
Length = 236
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 259 ALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDRPRGRSPPL 308
AL P+ TP P R+ C CR A+ GT PH W GR P L
Sbjct: 47 ALAPS--TPFGDTLSPGRSTCPACRSAVAGTHPH-----WGGSGGRLPAL 89
>gi|239746703 PREDICTED: hypothetical protein XP_002343814 [Homo
sapiens]
Length = 236
Score = 31.6 bits (70), Expect = 0.97
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 259 ALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDRPRGRSPPL 308
AL P+ TP P R+ C CR A+ GT PH W GR P L
Sbjct: 47 ALAPS--TPFGDTLSPGRSTCPACRSAVAGTHPH-----WGGSGGRLPAL 89
>gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo
sapiens]
Length = 212
Score = 31.2 bits (69), Expect = 1.3
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 257 RGALGPNRATPKSPR-PGPQRAPCRRCRVALDGTGP-------HLPRDGWDRPRGRS 305
+ LG +ATP PR P P AP + L G G +PR GW R R R+
Sbjct: 142 KSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRRGRGFSVPRKGWRRERERA 198
>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
Length = 1215
Score = 31.2 bits (69), Expect = 1.3
Identities = 24/56 (42%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 265 ATPKSPRPGPQRAPCRRC-RVALDGTGPHLPRDGWDRPRGRSPPLCPQ--RYLRPR 317
A P+ P GP R P R R A DG G P G R G S P PQ +RPR
Sbjct: 111 AAPRGPG-GPARTPAVRAGRRAADGPGEEAPAPGRARFSGLSQPRGPQPRAAVRPR 165
>gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo
sapiens]
Length = 212
Score = 31.2 bits (69), Expect = 1.3
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 257 RGALGPNRATPKSPR-PGPQRAPCRRCRVALDGTGP-------HLPRDGWDRPRGRS 305
+ LG +ATP PR P P AP + L G G +PR GW R R R+
Sbjct: 142 KSRLGRGQATPPPPRDPRPGTAPFQAVGGTLGGGGTGRRGRGFSVPRKGWRRERERA 198
>gi|42766424 hypothetical protein LOC389119 [Homo sapiens]
Length = 287
Score = 31.2 bits (69), Expect = 1.3
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 206 LQTTGSLA-DTVVSISKLVHSKRAELKQELSDKLVLGFRRKTLTSNLWFAELRGALGPNR 264
L+ +G+L D+V + + + + E D + G R L + F+E+ G+
Sbjct: 50 LRASGALEEDSVCCVEEEEEEEEEAVVTEDRDAALGGPREHALDWDSGFSEVSGSTWREE 109
Query: 265 ATPKSPRPGPQRAPCRRCRVALDG 288
P S RP P P RR +++ G
Sbjct: 110 ELPVSQRPAPSAQPLRRQCLSVSG 133
>gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens]
Length = 1796
Score = 31.2 bits (69), Expect = 1.3
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 142 PKGESLGVPGGYGPGSPTNASSSSM--MPLLLTE-----GTQVLAPEWIPESLGLP-KEA 193
P+GE +G+PG GP P S S+ MP + E T + P+ IP +G P ++
Sbjct: 1490 PRGE-IGLPGPQGPPGPQGPSGLSIQGMPGMPGEKGEKGDTGLPGPQGIPGGVGSPGRDG 1548
Query: 194 SPLWLAAPGRN 204
SP PG++
Sbjct: 1549 SPGQRGLPGKD 1559
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 30.8 bits (68), Expect = 1.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 206 LQTTGSLADTVVSISKLVHSKRAELKQELSDKLVLGFRRKTLTSNLWFA 254
+ TT ++ T VS S V S+ ++K+E + L G R +++ N F+
Sbjct: 6917 MDTTSTMGHTTVSTSMSVSSETTKIKRESTYSLTPGLRETSISQNASFS 6965
>gi|82546879 GTP binding protein 1 [Homo sapiens]
Length = 669
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 104 GRLEQLGRLGQSLQVSRRGLVSLQPQRGALRLDTYTPLPKGESLGVPGGYGPGSPTNASS 163
GR + +G + + LQ + ++ +PQ+ ++ PL K + G GG G+P
Sbjct: 562 GRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLTKRDEGGPSGGPAVGAPPPGDE 621
Query: 164 SSMMPLLLTEGTQVLAPEWIPESLG 188
+S + + L P+ P S G
Sbjct: 622 ASSVGAGQPAASSNLQPQPKPSSGG 646
>gi|116006967 neuregulin 1 isoform GGF2 [Homo sapiens]
Length = 422
Score = 30.4 bits (67), Expect = 2.2
Identities = 45/148 (30%), Positives = 59/148 (39%), Gaps = 21/148 (14%)
Query: 150 PGGYGPGSPTNASSS-SMMPLLLTEGTQVLAPEWIPESLGLPKEASPLWLAAPGRNLLQT 208
P PGS +S ++PLLL GT LAP + P AS + + P +Q
Sbjct: 15 PRAQRPGSAARSSPPLPLLPLLLLLGTAALAPGAAAGNEAAPAGASVCYSSPPSVGSVQE 74
Query: 209 TGSLADTVVSISKLVHSKRAELKQELSDKLVLGFRRKTLTSNLWFAELRGALGPNRATPK 268
A V I VH +R + Q D RK + A GA G +R P
Sbjct: 75 LAQRA--AVVIEGKVHPQRRQ--QGALD-------RKAAAA----AGEAGAWGGDREPPA 119
Query: 269 S-PRP-GPQRAPCRRCRVALDGTGPHLP 294
+ PR GP P +A +GT P P
Sbjct: 120 AGPRALGP---PAEEPLLAANGTVPSWP 144
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 30.0 bits (66), Expect = 2.8
Identities = 43/163 (26%), Positives = 60/163 (36%), Gaps = 28/163 (17%)
Query: 144 GESLGVPGGYGPGSPTNASSSSMM---PLLLTEGTQVLA--------PEWIPESLGLPKE 192
G S PG PG+P A++ SMM L L+ QV A P + G P
Sbjct: 22 GGSFASPGRLFPGAPPTAAAGSMMKKDALTLSLSEQVAAALKPAAAPPPTPLRADGAPSA 81
Query: 193 ASP-----------LWLAAP--GRNLLQTTGSLADTVVSISKLVHSKRAELKQELSDKLV 239
A P L LA+P R ++Q+ G + T S L A +QE ++ V
Sbjct: 82 APPDGLLASPDLGLLKLASPELERLIIQSNGLVTTTPTSSQFLYPKVAASEEQEFAEGFV 141
Query: 240 LGF----RRKTLTSNLWFAELRGALGPNRATPKSPRPGPQRAP 278
++ L + A A G T P + AP
Sbjct: 142 KALEDLHKQNQLGAGAAAAAAAAAAGGPSGTATGSAPPGELAP 184
>gi|169202775 PREDICTED: hypothetical protein [Homo sapiens]
Length = 96
Score = 30.0 bits (66), Expect = 2.8
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 259 ALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPH-LPRDGWDRPRGRSPP----LCPQRY 313
A P RA P+ RPGP+ PC + PH LP G +PP L P R
Sbjct: 26 APAPPRA-PEDFRPGPRGGPCGLAASVVTIPAPHGLPPVPASAQDGAAPPVSSLLSPPRR 84
Query: 314 LRPR 317
L PR
Sbjct: 85 LPPR 88
>gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 632
Score = 30.0 bits (66), Expect = 2.8
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 15/57 (26%)
Query: 261 GPNRATPKSPR-------PGPQRAPCRRCRVALDGTGPHLPRDGWDRPRGRSPPLCP 310
GP R P+ PR GP P + R+A D G P GR PP P
Sbjct: 133 GPKREGPRGPRAGGAQGPSGPSELPAAQGRLAPDSAGEGAP--------GREPPASP 181
>gi|169160607 PREDICTED: hypothetical protein LOC100128071 [Homo
sapiens]
Length = 127
Score = 30.0 bits (66), Expect = 2.8
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 261 GPNRATPKSPRP-GPQRAPCRRCRVALDGTGP---------HLPRDGWDRPRGRSPPL 308
GP AT P P GP+R+P R A GP L + P+GR P+
Sbjct: 8 GPGHATETCPAPPGPERSPAARAPAAASSLGPVSTAGRAPRGLDMSAQEPPQGRRFPI 65
>gi|89034573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 96
Score = 30.0 bits (66), Expect = 2.8
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 259 ALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPH-LPRDGWDRPRGRSPP----LCPQRY 313
A P RA P+ RPGP+ PC + PH LP G +PP L P R
Sbjct: 26 APAPPRA-PEDFRPGPRGGPCGLAASVVTIPAPHGLPPVPASAQDGAAPPVSSLLSPPRR 84
Query: 314 LRPR 317
L PR
Sbjct: 85 LPPR 88
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 30.0 bits (66), Expect = 2.8
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 15/57 (26%)
Query: 261 GPNRATPKSPR-------PGPQRAPCRRCRVALDGTGPHLPRDGWDRPRGRSPPLCP 310
GP R P+ PR GP P + R+A D G P GR PP P
Sbjct: 428 GPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAP--------GREPPASP 476
>gi|169161545 PREDICTED: hypothetical protein LOC100128071 [Homo
sapiens]
Length = 127
Score = 30.0 bits (66), Expect = 2.8
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 261 GPNRATPKSPRP-GPQRAPCRRCRVALDGTGP---------HLPRDGWDRPRGRSPPL 308
GP AT P P GP+R+P R A GP L + P+GR P+
Sbjct: 8 GPGHATETCPAPPGPERSPAARAPAAASSLGPVSTAGRAPRGLDMSAQEPPQGRRFPI 65
>gi|89033790 PREDICTED: hypothetical protein [Homo sapiens]
Length = 96
Score = 30.0 bits (66), Expect = 2.8
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 259 ALGPNRATPKSPRPGPQRAPCRRCRVALDGTGPH-LPRDGWDRPRGRSPP----LCPQRY 313
A P RA P+ RPGP+ PC + PH LP G +PP L P R
Sbjct: 26 APAPPRA-PEDFRPGPRGGPCGLAASVVTIPAPHGLPPVPASAQDGAAPPVSSLLSPPRR 84
Query: 314 LRPR 317
L PR
Sbjct: 85 LPPR 88
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 30.0 bits (66), Expect = 2.8
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 15/57 (26%)
Query: 261 GPNRATPKSPR-------PGPQRAPCRRCRVALDGTGPHLPRDGWDRPRGRSPPLCP 310
GP R P+ PR GP P + R+A D G P GR PP P
Sbjct: 491 GPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAP--------GREPPASP 539
>gi|169161248 PREDICTED: hypothetical protein LOC100128071 [Homo
sapiens]
Length = 127
Score = 30.0 bits (66), Expect = 2.8
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 261 GPNRATPKSPRP-GPQRAPCRRCRVALDGTGP---------HLPRDGWDRPRGRSPPL 308
GP AT P P GP+R+P R A GP L + P+GR P+
Sbjct: 8 GPGHATETCPAPPGPERSPAARAPAAASSLGPVSTAGRAPRGLDMSAQEPPQGRRFPI 65
>gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 387
Score = 30.0 bits (66), Expect = 2.8
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 15/57 (26%)
Query: 261 GPNRATPKSPR-------PGPQRAPCRRCRVALDGTGPHLPRDGWDRPRGRSPPLCP 310
GP R P+ PR GP P + R+A D G P GR PP P
Sbjct: 195 GPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAP--------GREPPASP 243
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 29.6 bits (65), Expect = 3.7
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 260 LGPNRATPKSPRPGPQRAPCRRCRVALDGTGPHLPRDGWDRPRGRSPPLCP 310
LGP P+ P G RAP R R G H P + + RG PPL P
Sbjct: 1766 LGPPFLVPE-PEAGGTRAPEERSRA-----GGHWPIEEEESSRGNLPPLVP 1810
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,078,872
Number of Sequences: 37866
Number of extensions: 735302
Number of successful extensions: 2946
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 2903
Number of HSP's gapped (non-prelim): 93
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.