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Search of human proteins with 239751194
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo
sapiens]
(325 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo ... 664 0.0
gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens] 658 0.0
gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo ... 650 0.0
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 44 3e-04
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ... 44 3e-04
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 42 7e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 41 0.002
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 39 0.005
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 39 0.005
gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|239752728 PREDICTED: hypothetical protein [Homo sapiens] 37 0.031
gi|239741092 PREDICTED: hypothetical protein XP_002342089 [Homo ... 37 0.031
gi|238859651 pleckstrin homology domain containing family A memb... 36 0.041
gi|23510333 pygopus homolog 2 [Homo sapiens] 36 0.041
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 36 0.053
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens] 35 0.070
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 35 0.070
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 35 0.070
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 35 0.12
gi|13375756 occludin/ELL domain containing 1 [Homo sapiens] 35 0.12
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 34 0.16
gi|217416343 fibrosin-like 1 [Homo sapiens] 34 0.16
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens] 34 0.16
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 34 0.16
gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens] 34 0.20
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Hom... 33 0.26
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 33 0.26
gi|223633982 hypothetical protein LOC729993 isoform 2 [Homo sapi... 33 0.35
>gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo
sapiens]
Length = 325
Score = 664 bits (1714), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATR 60
MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATR
Sbjct: 1 MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATR 60
Query: 61 EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQR 120
EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQR
Sbjct: 61 EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQR 120
Query: 121 ARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE 180
ARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE
Sbjct: 121 ARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE 180
Query: 181 DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 240
DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR
Sbjct: 181 DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 240
Query: 241 LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP 300
LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP
Sbjct: 241 LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP 300
Query: 301 GSAARAGAWVEEKRSGEGSRKRLES 325
GSAARAGAWVEEKRSGEGSRKRLES
Sbjct: 301 GSAARAGAWVEEKRSGEGSRKRLES 325
>gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]
Length = 325
Score = 658 bits (1697), Expect = 0.0
Identities = 322/325 (99%), Positives = 323/325 (99%)
Query: 1 MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATR 60
MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGP+QRGPRLRLGGSGTRQLQQAAATR
Sbjct: 1 MTHMRLAAVLGQLEQAALGQQALGAVVDILQGAGGPEQRGPRLRLGGSGTRQLQQAAATR 60
Query: 61 EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQR 120
EGEEGEAGGLSDQPGVMRTQGRTVGVAALHAR RASQRAGRHPVEAELGPAQRAVQQEQR
Sbjct: 61 EGEEGEAGGLSDQPGVMRTQGRTVGVAALHARFRASQRAGRHPVEAELGPAQRAVQQEQR 120
Query: 121 ARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE 180
ARARAPGRVPGGRPRLLQQSRPPLPRRHG QRPVVLRVRAVHPSLQVCHLGEGLPSGEGE
Sbjct: 121 ARARAPGRVPGGRPRLLQQSRPPLPRRHGRQRPVVLRVRAVHPSLQVCHLGEGLPSGEGE 180
Query: 181 DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 240
DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR
Sbjct: 181 DGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSR 240
Query: 241 LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP 300
LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP
Sbjct: 241 LLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRP 300
Query: 301 GSAARAGAWVEEKRSGEGSRKRLES 325
GSAARAGAWVEEKRSGEGSRKRLES
Sbjct: 301 GSAARAGAWVEEKRSGEGSRKRLES 325
>gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo
sapiens]
Length = 368
Score = 650 bits (1678), Expect = 0.0
Identities = 318/318 (100%), Positives = 318/318 (100%)
Query: 8 AVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA 67
AVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA
Sbjct: 51 AVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA 110
Query: 68 GGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG 127
GGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG
Sbjct: 111 GGLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPG 170
Query: 128 RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 187
RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH
Sbjct: 171 RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSH 230
Query: 188 SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP 247
SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP
Sbjct: 231 SLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLP 290
Query: 248 TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG 307
TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG
Sbjct: 291 TGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAG 350
Query: 308 AWVEEKRSGEGSRKRLES 325
AWVEEKRSGEGSRKRLES
Sbjct: 351 AWVEEKRSGEGSRKRLES 368
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 43.5 bits (101), Expect = 3e-04
Identities = 72/248 (29%), Positives = 95/248 (38%), Gaps = 37/248 (14%)
Query: 21 QALGA--VVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMR 78
QALG V+ ++G GG + G LR G G + QA T G Q G
Sbjct: 363 QALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-H 416
Query: 79 TQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQ 138
GR G A H ++ Q R PVE L R + E AR A G+V GGR RL +
Sbjct: 417 ASGRHAGEGAPHGKLAGVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHR 472
Query: 139 QSRPPLPRRH-------------GHQRPVVLRVRAVHP-----SLQVCHLGEGLPSGEGE 180
+ R L R ++ P +LR +A + G GE +
Sbjct: 473 ERREGLLARERARLFHLGRRCALANRAPALLRAQAASAGRDGGGAMAPQMRLGPQGGERD 532
Query: 181 DGAEGSHSLDE---CPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQ 237
G H L +RQ R+ + Q G E QH + RR P R +
Sbjct: 533 AGLGRPHQLIHDRLGQGARQRERRRAVGRQRQRG-EERRLVTQHRAHGEVRR--PKREER 589
Query: 238 -GSRLLPD 244
GSRL P+
Sbjct: 590 AGSRLAPE 597
>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
sapiens]
Length = 457
Score = 43.5 bits (101), Expect = 3e-04
Identities = 72/248 (29%), Positives = 95/248 (38%), Gaps = 37/248 (14%)
Query: 21 QALGA--VVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMR 78
QALG V+ ++G GG + G LR G G + QA T G Q G
Sbjct: 220 QALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-H 273
Query: 79 TQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQ 138
GR G A H ++ Q R PVE L R + E AR A G+V GGR RL +
Sbjct: 274 ASGRHAGEGAPHGKLAGVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHR 329
Query: 139 QSRPPLPRRH-------------GHQRPVVLRVRAVHP-----SLQVCHLGEGLPSGEGE 180
+ R L R ++ P +LR +A + G GE +
Sbjct: 330 ERREGLLARERARLFHLGRRCALANRAPALLRAQAASAGRDGGGAMAPQMRLGPQGGERD 389
Query: 181 DGAEGSHSLDE---CPPSRQVRRQPHIPFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQ 237
G H L +RQ R+ + Q G E QH + RR P R +
Sbjct: 390 AGLGRPHQLIHDRLGQGARQRERRRAVGRQRQRG-EERRLVTQHRAHGEVRR--PKREER 446
Query: 238 -GSRLLPD 244
GSRL P+
Sbjct: 447 AGSRLAPE 454
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 42.0 bits (97), Expect = 7e-04
Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 12/129 (9%)
Query: 21 QALGA--VVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMR 78
QALG V+ ++G GG + G LR G G + QA T G Q G
Sbjct: 220 QALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGIQARDTGGGPRNRG-----QEGT-H 273
Query: 79 TQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQ 138
GR G A H ++ Q R PVE L R + E AR A G+V GGR RL +
Sbjct: 274 ASGRHAGEGAPHGKLAGVQEE-RVPVEELLA---RQARGEAEARQGALGQVRGGRVRLHR 329
Query: 139 QSRPPLPRR 147
+ R L R
Sbjct: 330 ERREGLLAR 338
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 40.8 bits (94), Expect = 0.002
Identities = 57/230 (24%), Positives = 73/230 (31%), Gaps = 44/230 (19%)
Query: 46 GGSGTRQLQQAAATREGEEGEAGGL-SDQPGVMRTQGRTVGVAALHARVRASQRAGRHPV 104
GGSG Q R G G+ G +PG + + R +A+ A P
Sbjct: 304 GGSGWGSPQ-----RNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPA 358
Query: 105 EAELGPAQRAVQQEQRARARAPG----RVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRA 160
+ P+ R+ Q RA G R R R +S PRR G +RP R
Sbjct: 359 RGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRG 418
Query: 161 VHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPH---- 216
SL SG G G G + G E H
Sbjct: 419 SSRSLSRARSSSDSGSGRGAPGP-----------------------GPEPGSERGHGGHG 455
Query: 217 -HAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGRPGEDPPFAGPSAW 265
A + PPRA+ P G G R P EG+ P P +W
Sbjct: 456 KRAKERPPRARPASTSPSPGAHGRRGGP------EGKSSSRSPGPHPRSW 499
Score = 28.9 bits (63), Expect = 6.5
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 33 AGGPDQRG---PRLRLGGSGTRQLQQAAATREGEEGE-AGGLSDQPGVMRTQGRTVGVAA 88
A P +RG PR +R L +A ++ + G A G +PG R G
Sbjct: 400 ASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGG------ 453
Query: 89 LHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRR 147
H + RA +R R A P+ A + ++ R PG PR SR P R
Sbjct: 454 -HGK-RAKERPPRAR-PASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSR 509
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 39.3 bits (90), Expect = 0.005
Identities = 73/312 (23%), Positives = 106/312 (33%), Gaps = 82/312 (26%)
Query: 16 AALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGT-------RQLQQAAATREGEEGEAG 68
++ QQ GA+ G GGP G GG+ QL + ++ G +G G
Sbjct: 264 SSFAQQRFGAM-----GGGGPSAAG-----GGTPQPTATPTLNQLLTSPSSARGYQGYPG 313
Query: 69 GLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGR 128
G D G + G G A + ASQ G A A QQ +PG
Sbjct: 314 G--DYSGGPQDGGAGKGPADM-----ASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGS 366
Query: 129 VPGG--------------------RPR-------LLQQSRPPLPRRHGH----------- 150
GG RP+ QQ PP + GH
Sbjct: 367 SGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQT 426
Query: 151 --QRPVVLRVRA------VHPSLQVCHLGEGLPSGEGEDG------AEGSHSLDECPPSR 196
+ P+ ++ RA + + Q+ G+ PSG G+ G + H + PP
Sbjct: 427 PQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYS 486
Query: 197 Q--VRRQPHIPFGF--QTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGR 252
Q + PH + Q +PP + PP +Q P + Q P T +
Sbjct: 487 QQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ--QSPAPYPSQQSTTQQH 544
Query: 253 PGEDPPFAGPSA 264
P PP++ P A
Sbjct: 545 PQSQPPYSQPQA 556
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 39.3 bits (90), Expect = 0.005
Identities = 73/312 (23%), Positives = 106/312 (33%), Gaps = 82/312 (26%)
Query: 16 AALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGT-------RQLQQAAATREGEEGEAG 68
++ QQ GA+ G GGP G GG+ QL + ++ G +G G
Sbjct: 264 SSFAQQRFGAM-----GGGGPSAAG-----GGTPQPTATPTLNQLLTSPSSARGYQGYPG 313
Query: 69 GLSDQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGR 128
G D G + G G A + ASQ G A A QQ +PG
Sbjct: 314 G--DYSGGPQDGGAGKGPADM-----ASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGS 366
Query: 129 VPGG--------------------RPR-------LLQQSRPPLPRRHGH----------- 150
GG RP+ QQ PP + GH
Sbjct: 367 SGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQT 426
Query: 151 --QRPVVLRVRA------VHPSLQVCHLGEGLPSGEGEDG------AEGSHSLDECPPSR 196
+ P+ ++ RA + + Q+ G+ PSG G+ G + H + PP
Sbjct: 427 PQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYS 486
Query: 197 Q--VRRQPHIPFGF--QTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEGR 252
Q + PH + Q +PP + PP +Q P + Q P T +
Sbjct: 487 QQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQ--QSPAPYPSQQSTTQQH 544
Query: 253 PGEDPPFAGPSA 264
P PP++ P A
Sbjct: 545 PQSQPPYSQPQA 556
>gi|169164783 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 37.7 bits (86), Expect = 0.014
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 35/151 (23%)
Query: 14 EQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQ 73
++ ALG QALG + + G G RG R +G +G + + AA G AG + +
Sbjct: 151 QRRALGGQALGLLAQV--GIGAGHARGGRGAVGPAGQHRARLGAAVL---RGTAGAPARR 205
Query: 74 PGVMRTQGRTVGVA----ALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRV 129
GV+ + + + LHAR R ++ GR V +E R R GR
Sbjct: 206 VGVVAERAASAACSLQRQRLHARRRVREQRGR-------------VAREVRGRVIGRGR- 251
Query: 130 PGGRPRLLQQSRPPLPRRHGHQRPVVLRVRA 160
+ +P + RRH +P + R RA
Sbjct: 252 ---------EVQPVVGRRH---KPALRRGRA 270
>gi|169163482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 37.7 bits (86), Expect = 0.014
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 35/151 (23%)
Query: 14 EQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQ 73
++ ALG QALG + + G G RG R +G +G + + AA G AG + +
Sbjct: 151 QRRALGGQALGLLAQV--GIGAGHARGGRGAVGPAGQHRARLGAAVL---RGTAGAPARR 205
Query: 74 PGVMRTQGRTVGVA----ALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRV 129
GV+ + + + LHAR R ++ GR V +E R R GR
Sbjct: 206 VGVVAERAASAACSLQRQRLHARRRVREQRGR-------------VAREVRGRVIGRGR- 251
Query: 130 PGGRPRLLQQSRPPLPRRHGHQRPVVLRVRA 160
+ +P + RRH +P + R RA
Sbjct: 252 ---------EVQPVVGRRH---KPALRRGRA 270
>gi|239752728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 246
Score = 36.6 bits (83), Expect = 0.031
Identities = 50/153 (32%), Positives = 64/153 (41%), Gaps = 29/153 (18%)
Query: 11 GQLEQAALGQQA-LGAVVDILQGA-----GGP------DQRGPRLRLGGSGTRQLQQAAA 58
GQ LG L ++V++ QG G P + P LRLG LQ+ +
Sbjct: 94 GQKNSLHLGMPGGLDSIVEVCQGTAKLVHGHPHIVQEEEAVMPELRLG------LQEVSQ 147
Query: 59 TREGEEGEAGGLSDQPGVMRTQGRTVG--VAALHARVRASQR-AGRHPVEAELGPAQRAV 115
EGE GE G +D+ G QG V V LH + Q+ GR V ++ V
Sbjct: 148 GTEGEVGERGKDNDEEG----QGVWVSPEVHGLHKEGQPQQQYQGRQQVGPDIHGL--VV 201
Query: 116 QQEQRARARAPGRVPGGRPRLLQQSRPPLPRRH 148
EQRA APG + RP R P RRH
Sbjct: 202 LLEQRAEIEAPGLMQ--RPVARIDVRLPEERRH 232
>gi|239741092 PREDICTED: hypothetical protein XP_002342089 [Homo
sapiens]
Length = 246
Score = 36.6 bits (83), Expect = 0.031
Identities = 50/153 (32%), Positives = 64/153 (41%), Gaps = 29/153 (18%)
Query: 11 GQLEQAALGQQA-LGAVVDILQGA-----GGP------DQRGPRLRLGGSGTRQLQQAAA 58
GQ LG L ++V++ QG G P + P LRLG LQ+ +
Sbjct: 94 GQKNSLHLGMPGGLDSIVEVCQGTAKLVHGHPHIVQEEEAVMPELRLG------LQEVSQ 147
Query: 59 TREGEEGEAGGLSDQPGVMRTQGRTVG--VAALHARVRASQR-AGRHPVEAELGPAQRAV 115
EGE GE G +D+ G QG V V LH + Q+ GR V ++ V
Sbjct: 148 GTEGEVGERGKDNDEEG----QGVWVSPEVHGLHKEGQPQQQYQGRQQVGPDIHGL--VV 201
Query: 116 QQEQRARARAPGRVPGGRPRLLQQSRPPLPRRH 148
EQRA APG + RP R P RRH
Sbjct: 202 LLEQRAEIEAPGLMQ--RPVARIDVRLPEERRH 232
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 36.2 bits (82), Expect = 0.041
Identities = 52/169 (30%), Positives = 64/169 (37%), Gaps = 24/169 (14%)
Query: 10 LGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGG 69
LG + QQ L V D L G GGP Q+ P S + LQ ++ E+
Sbjct: 471 LGSPQDRVSAQQQLWMVEDTLAGLGGP-QKPPPHTEPDSPSPVLQGEESSERESLPESLE 529
Query: 70 LSDQPGVMRTQGRTVG----VAALHARV------RASQRAGRHPVEAELG-------PAQ 112
LS GR G +A+ H + RAS GRH +LG P
Sbjct: 530 LSSPRSPETDWGRPPGGDKDLASPHLGLGSPRVSRASSPEGRHLPSPQLGTKAPVARPRM 589
Query: 113 RAVQQEQRARARAPGRVPGGR---PRLLQQSRPPLPRRHG---HQRPVV 155
A +Q +R R P R PRLL R P R QRPVV
Sbjct: 590 SAQEQLERMRRNQECGRPFPRPTSPRLLTLGRTLSPARRQPDVEQRPVV 638
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 36.2 bits (82), Expect = 0.041
Identities = 74/323 (22%), Positives = 105/323 (32%), Gaps = 56/323 (17%)
Query: 41 PRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHARVRA----- 95
P +L G G A + ++G+AG P R + T G A H A
Sbjct: 8 PPDKLEGGGGPAPPPAPPSTGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLTEFAPPPTP 67
Query: 96 --SQRAGRHPVEAELGPAQRAVQQEQ-----------RARARAPGRVP-------GGRPR 135
+P E + G + V R + G+VP GG P+
Sbjct: 68 MVDHLVASNPFEDDFGAPKVGVAAPPFLGSPVPFGGFRVQGGMAGQVPPGYSTGGGGGPQ 127
Query: 136 LLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSL----DE 191
L++ PP P + P+ + G G P + + +
Sbjct: 128 PLRRQPPPFPPN------------PMGPAFNMPPQGPGYPPPGNMNFPSQPFNQPLGQNF 175
Query: 192 CPPSRQVRRQPHIPFG--FQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRL------LP 243
PPS Q+ P FG + P A PP R P S L LP
Sbjct: 176 SPPSGQMMPGPVGGFGPMISPTMGQPPRAELGPPSLSQRFAQPGAPFGPSPLQRPGQGLP 235
Query: 244 DLLPTGEGRPGEDPPFAGPSAW-----LHVPLFWSLLERPRPILRLAYLEGRR--FPWNA 296
L P PG DP F GP L+ P + + P A + G + FP N+
Sbjct: 236 SLPPNTSPFPGPDPGFPGPGGEDGGKPLNPPASTAFPQEPHSGSPAAAVNGNQPSFPPNS 295
Query: 297 GLRPGSAARAGAWVEEKRSGEGS 319
R G A + ++G GS
Sbjct: 296 SGRGGGTPDANSLAPPGKAGGGS 318
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 35.8 bits (81), Expect = 0.053
Identities = 58/208 (27%), Positives = 77/208 (37%), Gaps = 37/208 (17%)
Query: 44 RLGGSGTRQLQQAAATREGEEGEAG-GLSDQPGVMRTQGRTVGVAALHARVRASQRAGRH 102
+ GGSG Q QQ ++ ++ A G + G R G T A +GR
Sbjct: 2305 KAGGSGPPQQQQQQQQQQQQQAVARPGRAATSGPRRYPGPTAEPLAGDRPPTGGHSSGRS 2364
Query: 103 P-VEAEL-GPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRA 160
P +E + GPA+ + RA R P P + + PP PR HG+ R
Sbjct: 2365 PRMERRVPGPAR---SESPRACRHGGARWPASGPHVSEG--PPGPRHHGYYRG------- 2412
Query: 161 VHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEPPHHAAQ 220
+G SG GE+ G++ D PP R H G TG P A
Sbjct: 2413 -----SDYDEADGPGSGGGEEAMAGAY--DAPPPVR------HASSG-ATGRSPRTPRAS 2458
Query: 221 HP----PRAQTRRL----FPLRGLQGSR 240
P P RRL +P GL R
Sbjct: 2459 GPACASPSRHGRRLPNGYYPAHGLARPR 2486
>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
Length = 358
Score = 35.4 bits (80), Expect = 0.070
Identities = 35/131 (26%), Positives = 46/131 (35%), Gaps = 8/131 (6%)
Query: 50 TRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHAR------VRASQRAGR-H 102
+RQ ++A A G GG D PG G V H A GR
Sbjct: 85 SRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLE 144
Query: 103 PVEAELG-PAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAV 161
P+ +G PA R + +Q R + Q PP P H H P + A
Sbjct: 145 PLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAP 204
Query: 162 HPSLQVCHLGE 172
H Q+ H G+
Sbjct: 205 HLQFQIAHCGQ 215
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 35.4 bits (80), Expect = 0.070
Identities = 47/164 (28%), Positives = 66/164 (40%), Gaps = 30/164 (18%)
Query: 81 GRTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQS 140
G V +A L R + QR EL QR E+ +R+P R GRPR + S
Sbjct: 1410 GMRVRLAELQRRYKEKQR--------ELARLQRKHDHERDESSRSPARRGPGRPRKRKHS 1461
Query: 141 ------RP--PLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDEC 192
RP PLPR G +V+AV SL + L L G G + A+ L+
Sbjct: 1462 SSLPAPRPTGPLPRSDGK------KVKAVRTSLGL--LCAELRGGSGGEPAKKRSKLERS 1513
Query: 193 P----PSRQVRRQPHIPFGFQTGVEP--PHHAAQHPPRAQTRRL 230
+ V + Q G+ P H AQ P+ +++ L
Sbjct: 1514 VYAGLQTASVEKAQCKKSSCQGGLAPSVAHRVAQLKPKVKSKGL 1557
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 35.4 bits (80), Expect = 0.070
Identities = 42/165 (25%), Positives = 54/165 (32%), Gaps = 33/165 (20%)
Query: 32 GAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHA 91
GA G + GP G G + + AA + EAGG G + G H
Sbjct: 32 GAAGGEAEGPE---GSEGAEEAPRGAAAVK----EAGGGGPDRG---PEAEARGTRGAHG 81
Query: 92 RVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRP-----PLPR 146
A + A P AE+ Q+ +PGR G PR Q P P +
Sbjct: 82 ETEAEEGA---PEGAEVPQGGEETSGAQQVEGASPGRGAQGEPRGEAQREPEDSAAPERQ 138
Query: 147 RHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDE 191
QRP V EG SGE D + L +
Sbjct: 139 EEAEQRPEV---------------PEGSASGEAGDSVDAEGPLGD 168
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 34.7 bits (78), Expect = 0.12
Identities = 47/182 (25%), Positives = 59/182 (32%), Gaps = 27/182 (14%)
Query: 36 PDQRGPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQ-PGVMRTQGRTVGVAALHARVR 94
P + P L+L G T Q A +G+ A S PG R + R G
Sbjct: 716 PCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSPPAPGESRDRARGAGQPG------ 769
Query: 95 ASQRAGRHPVEAELGPAQRAVQQEQRARA-RAPGRVPGGRPRLLQQSRPPLPRRHGHQRP 153
G GP +RA + R R + GGR RL R + R G +R
Sbjct: 770 ----PGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRR--VRRESGRRRA 823
Query: 154 VVLRVRAVHPSLQVCHLGEG-------------LPSGEGEDGAEGSHSLDECPPSRQVRR 200
A+ + GE LPS A GS L PSR R
Sbjct: 824 GATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPSRAAPR 883
Query: 201 QP 202
P
Sbjct: 884 GP 885
>gi|13375756 occludin/ELL domain containing 1 [Homo sapiens]
Length = 264
Score = 34.7 bits (78), Expect = 0.12
Identities = 45/158 (28%), Positives = 56/158 (35%), Gaps = 5/158 (3%)
Query: 125 APGRVPGGRPRLL-QQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGA 183
+P PG + L Q +R P P R GH P R A P C +P+ E
Sbjct: 9 SPTADPGSELQTLGQAARRPPPPRAGHDAPRRTRPSARKP--LSCFSRRPMPTREPPKTR 66
Query: 184 EGSHSLDECPPSRQVRRQPHIPFGFQTGV-EPPHHAAQHPPRAQTRRLFPLRGLQGSRLL 242
L PP Q P G +T PP P +A+T+++ L LL
Sbjct: 67 GSRGHLHTHPPGPGPPLQGLAPRGLKTSAPRPPCQPQPGPHKAKTKKIVFEDELLSQALL 126
Query: 243 PDLLPTGEGRPGEDP-PFAGPSAWLHVPLFWSLLERPR 279
P G G P P P L P S ER R
Sbjct: 127 GAKKPIGAIPKGHKPRPHPVPDYELKYPPVSSERERSR 164
>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
subunit [Homo sapiens]
Length = 2339
Score = 34.3 bits (77), Expect = 0.16
Identities = 50/179 (27%), Positives = 67/179 (37%), Gaps = 27/179 (15%)
Query: 36 PDQRG--PRLRLGGSGTR--QLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHA 91
P +RG + +G SG +Q + TR G +GE QPG + +QGR + L A
Sbjct: 1954 PLERGHSTEIPVGRSGALAVDVQMQSITRRGPDGEP-----QPG-LESQGRAASMPRLAA 2007
Query: 92 RVRASQRAGRHPVEAELGPAQRAVQQ-EQRARARAPGRVPGGRPRLLQQSRPPLPRRHGH 150
+ PV + P +R++ QR R RP Q S R
Sbjct: 2008 ETQ--------PV-TDASPMKRSISTLAQRPRGTHLCSTTPDRPPPSQASSHHHHHRCHR 2058
Query: 151 QRPVVLRVRAVHPSLQV-------CHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQP 202
+R R PSL +G GLP GEG G + Q RRQP
Sbjct: 2059 RRDRKQRSLEKGPSLSADMDGAPSSAVGPGLPPGEGPTGCRRERERRQERGRSQERRQP 2117
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 34.3 bits (77), Expect = 0.16
Identities = 50/190 (26%), Positives = 67/190 (35%), Gaps = 30/190 (15%)
Query: 123 ARAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDG 182
A PG PG R L + PP P RH Q P + R + P+ LG +G +
Sbjct: 272 APCPGPPPGSRANPLVKKEPPAPHRHTPQPPPP-QPRGLLPTHVPASLGAF--AGHSQAA 328
Query: 183 AEGSHSLDECPPS-----RQVRRQPHIPFGFQTGVEPPHHAAQH-PPRAQTRRLFPLRGL 236
A G H L + + V PH P PH + H R+Q +
Sbjct: 329 ANGLHGLSRSSSAPLGLGKHVSLSPHGP--------GPHLSTSHLALRSQAQHQLHAAMF 380
Query: 237 QGSRLLPDLLPTGEGRPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNA 296
LP PP A P++ L +P + E R L +L A
Sbjct: 381 AAPPTLP-------------PPPALPASSLVLPGHPADHELLRQELNTRFLVQSAERPGA 427
Query: 297 GLRPGSAARA 306
L PG+ RA
Sbjct: 428 SLGPGALLRA 437
>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
Length = 1626
Score = 34.3 bits (77), Expect = 0.16
Identities = 54/181 (29%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 14 EQAALGQQALGAVVDILQGAGGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEAG--GLS 71
E LG+ L V + G P GP R+G G + + TR GE+GE G G
Sbjct: 552 EPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTR-GEKGERGLDGFP 610
Query: 72 DQPGVMRTQGRTVGVAALHARVRASQRAGRHPVEAELGPA------QRAVQQE-QRARAR 124
+PG QGR S AG + ++GPA VQQE +
Sbjct: 611 GKPGDTGQQGRP----------GPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQG 660
Query: 125 APGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAE 184
APG P G Q P P G + P+ R P LQ GL +G+ G
Sbjct: 661 APG--PRG-----HQGAPGPP---GARGPIGPEGRDGPPGLQ------GLRGKKGDMGPP 704
Query: 185 G 185
G
Sbjct: 705 G 705
Score = 31.2 bits (69), Expect = 1.3
Identities = 43/156 (27%), Positives = 59/156 (37%), Gaps = 15/156 (9%)
Query: 34 GGPDQRGPRLRLGGSGTRQL--QQAAATREGEEGEAGGLSDQPGVMRTQGRTVGVAALHA 91
G P +RG G G R +Q A R GE+GEA GL PG +G G
Sbjct: 768 GEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEA-GLPGAPGFPGVRGEK-GDQGEKG 825
Query: 92 RVRASQRAGRHPVEAELGPAQRAVQQEQRARARAPGRVPGGRPRLLQQSRPPLPRRHGHQ 151
+ G + E GPA + R+PG + ++ P LP G Q
Sbjct: 826 ELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQ 885
Query: 152 -RPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGS 186
RP L + G P +G++GA G+
Sbjct: 886 GRPGELGPQG----------PTGPPGAKGQEGAHGA 911
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.3 bits (77), Expect = 0.16
Identities = 51/218 (23%), Positives = 80/218 (36%), Gaps = 23/218 (10%)
Query: 34 GGPDQRGPRLRLGGSGTRQLQQAAATREGEEGEA---GGLSDQPGVMRTQGRTVGVAALH 90
G R P+ R S R + + R G G + R + R+ H
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 563
Query: 91 ARVRASQRAGRHPVEAELGPAQRAVQQEQRARARAP------GRVPGGRPRLLQQSRPPL 144
+R A++ R A G ++ +R+R+R P R P R R +SR P
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGR--SRSRTPA 621
Query: 145 PRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHI 204
RR + PV R R+ P+ + P+ G + P+R+ R +
Sbjct: 622 RRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSR--------TPARRGRSRSRT 673
Query: 205 PFGFQTGVEPPHHAAQHPPRAQTRRLFPLRGLQGSRLL 242
P ++G A+ R ++R P RG SR L
Sbjct: 674 P-ARRSGRSRSRTPAR---RGRSRSRTPRRGRSRSRSL 707
>gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]
Length = 1088
Score = 33.9 bits (76), Expect = 0.20
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 169 HLGEGLPSGEGEDGAEGSHSLDECPPSRQVRRQPHIPFGFQTGVEP--PHHAAQHPPRAQ 226
H G P GA+G +L+E P +P++ + F GV P P H QHPP+
Sbjct: 184 HQLSGTPYEGPSFGADGPTALEEMP-------RPYVDYLFP-GVGPHGPGHQHQHPPKGY 235
Query: 227 TRRL------FPLRGLQGSRLLPDLLPTGE 250
+ FPL+G R P LL GE
Sbjct: 236 GASVEAAGAHFPLQGAHYGR--PHLLVPGE 263
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 33.5 bits (75), Expect = 0.26
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 17/153 (11%)
Query: 7 AAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPRLRL--------GGSGTRQLQQAAA 58
A + ++ A+ GQ+ +D++ G G RG L++ RQ++Q
Sbjct: 192 AVIAASVQDASRGQRGAELRLDLVHGPWG---RGKELKILVLLLLPVQSGQQRQVEQLQH 248
Query: 59 TREGEEGEAGGLSDQP-GVMRTQG-RTVGVAALHARVRASQRAGRHPVEAELGPAQRAVQ 116
+ E G+ + P GV G R G AA R + + A + PA+R+
Sbjct: 249 RHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQ---PAERSRG 305
Query: 117 QEQRARARAPGRVPGGRPRLLQQSRPPLPRRHG 149
+ + A RAP R P R + P PRR G
Sbjct: 306 EPRPAEPRAPPRPPPA-ARRPPPATAPSPRRAG 337
>gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Homo
sapiens]
Length = 2063
Score = 33.5 bits (75), Expect = 0.26
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 13/108 (12%)
Query: 213 EPPHHAAQHPPRAQTRRLFPLRGLQGSRLLPDLLPTGEG---RPGEDPPFA-GPSAWLHV 268
EPP ++ PP R FPL GL+ +R L P EG RP + A P+ LH
Sbjct: 159 EPPARESRQPPTPPPRTCFPLAGLRSARPLTG--PETEGRLRRPQQQQERAQRPADGLH- 215
Query: 269 PLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAARAGAWVEEKRSG 316
W + +P+ R + A P S +RA + EE+ G
Sbjct: 216 --SWHIFSQPQAGARASCSSSS----IAASYPVSRSRAASSSEEEEEG 257
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 33.5 bits (75), Expect = 0.26
Identities = 40/158 (25%), Positives = 55/158 (34%), Gaps = 45/158 (28%)
Query: 124 RAPGRVPGGRPRLLQQSRPPLPRRHGHQRPVVLRVRAVHPSLQVCHLGEGLPSGEGEDGA 183
R+ G++ G L + RPP P R H ++H GL +G G
Sbjct: 479 RSSGQLSGRSVSLRKLKRPPPPPRRTH---------SLHQ--------RGLAVPDGPLGL 521
Query: 184 EGSHSLDECPPSRQVRRQPHIPFGFQTGVE--------PPHHA-----------AQHPPR 224
PP + ++QP +P TG PP+ A ++ PPR
Sbjct: 522 ---------PPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPR 572
Query: 225 AQTRRLFPLRGLQGSRLLPDLLPTGEGRPGEDPPFAGP 262
+ R L P G P L P G P P A P
Sbjct: 573 SPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQP 610
>gi|223633982 hypothetical protein LOC729993 isoform 2 [Homo
sapiens]
Length = 262
Score = 33.1 bits (74), Expect = 0.35
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 40 GPRLRLGGSGTRQLQQAAATREGEEGEAGGLSDQPGVMRTQGRTVG------VAALHARV 93
GPR RL G+ A+R G G +GG + +PG+ T R + + L ARV
Sbjct: 3 GPR-RLAAPGSSLGSFGRASRGGRRGSSGGRAAEPGLGDTMRRVLRLLLGCFLTELCARV 61
Query: 94 -RASQRAGRHPVEAELG 109
RA +RAG H A+LG
Sbjct: 62 CRAQERAG-HGQLAQLG 77
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,139,968
Number of Sequences: 37866
Number of extensions: 971129
Number of successful extensions: 3830
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 3705
Number of HSP's gapped (non-prelim): 304
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.