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Search of human proteins with 239750880
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750880 PREDICTED: hypothetical protein XP_002347591 [Homo
sapiens]
(110 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750880 PREDICTED: hypothetical protein XP_002347591 [Homo ... 228 8e-61
gi|239756354 PREDICTED: hypothetical protein [Homo sapiens] 225 7e-60
gi|239745240 PREDICTED: hypothetical protein XP_002343395 [Homo ... 225 7e-60
gi|54873613 agrin [Homo sapiens] 39 9e-04
gi|58218966 hypothetical protein LOC339201 [Homo sapiens] 39 0.001
gi|213513324 hypothetical protein LOC401115 [Homo sapiens] 37 0.003
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 37 0.003
gi|239757158 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo ... 37 0.004
gi|239746157 PREDICTED: hypothetical protein XP_002343679 [Homo ... 37 0.004
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 36 0.006
gi|27734799 REST corepressor 2 [Homo sapiens] 36 0.006
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 36 0.008
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 35 0.013
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 35 0.013
gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 35 0.013
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 35 0.013
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 35 0.013
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 35 0.013
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 35 0.017
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 35 0.017
gi|239745123 PREDICTED: hypothetical protein XP_002343373 [Homo ... 35 0.017
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 34 0.022
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 34 0.022
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 34 0.022
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 34 0.022
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|38787970 tensin like C1 domain containing phosphatase isoform... 34 0.022
>gi|239750880 PREDICTED: hypothetical protein XP_002347591 [Homo
sapiens]
Length = 110
Score = 228 bits (581), Expect = 8e-61
Identities = 110/110 (100%), Positives = 110/110 (100%)
Query: 1 MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP 60
MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP
Sbjct: 1 MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP 60
Query: 61 APSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ 110
APSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ
Sbjct: 61 APSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ 110
>gi|239756354 PREDICTED: hypothetical protein [Homo sapiens]
Length = 110
Score = 225 bits (573), Expect = 7e-60
Identities = 109/110 (99%), Positives = 109/110 (99%)
Query: 1 MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP 60
MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP
Sbjct: 1 MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP 60
Query: 61 APSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ 110
APSRSPDPSK LAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ
Sbjct: 61 APSRSPDPSKCLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ 110
>gi|239745240 PREDICTED: hypothetical protein XP_002343395 [Homo
sapiens]
Length = 110
Score = 225 bits (573), Expect = 7e-60
Identities = 109/110 (99%), Positives = 109/110 (99%)
Query: 1 MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP 60
MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP
Sbjct: 1 MRLRKTSTVLEEVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAP 60
Query: 61 APSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ 110
APSRSPDPSK LAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ
Sbjct: 61 APSRSPDPSKCLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRLQ 110
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 38.9 bits (89), Expect = 9e-04
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 43 RRLLARNCTACAALPAAPAPSRSPDP-SKRLAPPRSRRSPLRAPAPLPGNRVP 94
R A + A P AP PS + P +K A P +RR P AP+ +PG R P
Sbjct: 1272 RATTASRLPSSAVTPRAPHPSHTSQPVAKTTAAPTTRRPPTTAPSRVPGRRPP 1324
>gi|58218966 hypothetical protein LOC339201 [Homo sapiens]
Length = 193
Score = 38.5 bits (88), Expect = 0.001
Identities = 33/110 (30%), Positives = 39/110 (35%), Gaps = 29/110 (26%)
Query: 15 PHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPA---------------- 58
PHW R A R G RS +W +R A C ACA P
Sbjct: 47 PHWGPQRGPRNAAAARPGPRS----RWHKRCAAA-CGACARPPGHQLQPPGAGAPQPGVA 101
Query: 59 ----APAPSRSPDPSKR----LAPPRSRRSPLRAPAPLPGNRVPPHAAGS 100
P P R+P ++ A PR R +P P PG PP A S
Sbjct: 102 CSYLGPRPQRTPCSAQSRPGWCAGPRRRHAPGTEPHVAPGRAPPPRAGAS 151
>gi|213513324 hypothetical protein LOC401115 [Homo sapiens]
Length = 139
Score = 37.0 bits (84), Expect = 0.003
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 32 GLRSPRERQWRRRLLARNCTAC--AALPAAPAPSRSPDPSKRLAPPRSRRSPLRAPAP 87
G+ S R R RR RN C AA P P P +P P +APP + RSP+ P P
Sbjct: 6 GVGSERMRVARR---TRNVCRCPRAAGPGVPEPRAAPLPLLAMAPPPACRSPMSPPPP 60
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 37.0 bits (84), Expect = 0.003
Identities = 32/86 (37%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 12 EVMPHWPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPDPS-- 69
EV P P A + R G RR L W+ R A A +A A P P P+P
Sbjct: 37 EVRPRPPPARLPRNG--RRGPL-------WKGRGPAGRAPAASAETALPRPREPPEPGAG 87
Query: 70 ---KRLAPPRS-RRSPLRAPAPLPGN 91
KR PPR+ R S L AP P G+
Sbjct: 88 PSPKRSPPPRAPRASSLAAPEPQVGD 113
Score = 28.5 bits (62), Expect = 1.2
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 19 MAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRLAPPRSR 78
MA V G A R R+ R R ++ +A + P P+R P +R + R
Sbjct: 1 MARVRGSGAAWRRVARAGRARLYKALPIAGGAVVDVEVRPRPPPARLPRNGRRGPLWKGR 60
Query: 79 RSPLRAPA-----PLPGNRVPPH--AAGSFSQSP 105
RAPA LP R PP A S +SP
Sbjct: 61 GPAGRAPAASAETALPRPREPPEPGAGPSPKRSP 94
>gi|239757158 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 36.6 bits (83), Expect = 0.004
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 18/91 (19%)
Query: 20 APVAREGPARRAGLRSPRERQWRRRL--LARNCTACAALPAAPAPSRSPDPSKRLAPPRS 77
+P R PA A RS R R L R CAALP+ PS P PS+R PP S
Sbjct: 63 SPPPRPSPALSA--RSSRRALARTALPGRGRGAPGCAALPSR-LPSPRPRPSRRAPPPVS 119
Query: 78 RRSPL-----------RAPAPLP--GNRVPP 95
RR+ R PA P G RV P
Sbjct: 120 RRTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
>gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo
sapiens]
Length = 150
Score = 36.6 bits (83), Expect = 0.004
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 18/91 (19%)
Query: 20 APVAREGPARRAGLRSPRERQWRRRL--LARNCTACAALPAAPAPSRSPDPSKRLAPPRS 77
+P R PA A RS R R L R CAALP+ PS P PS+R PP S
Sbjct: 63 SPPPRPSPALSA--RSSRRALARTALPGRGRGAPGCAALPSR-LPSPRPRPSRRAPPPVS 119
Query: 78 RRSPL-----------RAPAPLP--GNRVPP 95
RR+ R PA P G RV P
Sbjct: 120 RRTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
>gi|239746157 PREDICTED: hypothetical protein XP_002343679 [Homo
sapiens]
Length = 150
Score = 36.6 bits (83), Expect = 0.004
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 18/91 (19%)
Query: 20 APVAREGPARRAGLRSPRERQWRRRL--LARNCTACAALPAAPAPSRSPDPSKRLAPPRS 77
+P R PA A RS R R L R CAALP+ PS P PS+R PP S
Sbjct: 63 SPPPRPSPALSA--RSSRRALARTALPGRGRGAPGCAALPSR-LPSPRPRPSRRAPPPVS 119
Query: 78 RRSPL-----------RAPAPLP--GNRVPP 95
RR+ R PA P G RV P
Sbjct: 120 RRTARGWEPGPTLGRPRGPARRPPLGGRVSP 150
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 36.2 bits (82), Expect = 0.006
Identities = 25/89 (28%), Positives = 30/89 (33%), Gaps = 14/89 (15%)
Query: 17 WPMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPDPSKR----- 71
W AP + A R R+R W RRL A P P P +R
Sbjct: 85 WTAAPGRQRADEGAAAARPERQRVWARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPP 144
Query: 72 ---------LAPPRSRRSPLRAPAPLPGN 91
APP +P PAP PG+
Sbjct: 145 AGLAGGPADSAPPSPAPAPRSRPAPRPGH 173
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 36.2 bits (82), Expect = 0.006
Identities = 34/105 (32%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 10 LEEVMPHW-------PMAPVAREGPARRAGLRSPR-ERQWRRRLLARNCTACAALPAAPA 61
LEEV+ W P APV E R A L +P E ++ + + + ++P AP
Sbjct: 379 LEEVLQEWEAEQDGAPGAPVPMEEARRGAPLPAPALEEDDEVQITSVSTSVPRSVPPAPP 438
Query: 62 PSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPL 106
P P P+ PP R PL AP + PP G F Q L
Sbjct: 439 PP--PPPTSLSQPPPLLRPPL-PTAPTLLRQPPPLQQGRFLQPRL 480
Score = 27.7 bits (60), Expect = 2.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 56 LPAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPL--PGNRVPPHAAGSFSQSP 105
LP AP R P P ++ + R +P + P PL P P H+A Q P
Sbjct: 457 LPTAPTLLRQPPPLQQGRFLQPRLAPNQPPPPLIRPALAAPRHSARPGPQPP 508
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 35.8 bits (81), Expect = 0.008
Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 16/103 (15%)
Query: 12 EVMPHWPMAPVAREGPARRAGLRSPRERQWRR-----RLLARNCTACAALPAAPAPSRSP 66
E++P P P+ GP A RE W LL ACA + A + P
Sbjct: 99 ELLPGGPARPL---GPGPAAPRLLKREPDWGDGDAPGSLLPAQVAACAQTVVSLAAAGQP 155
Query: 67 DPSKRLAPPRSRRSPLRAPAPLP------GNRVPPHAAGSFSQ 103
P PPRS SP + PAP P G R P + + Q
Sbjct: 156 TPPTSPEPPRS--SPRQTPAPGPAREKSAGKRGPDRGSPEYRQ 196
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 35.0 bits (79), Expect = 0.013
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 56 LPAAPAPSRSPDPSKRLAPP----RSRRSPLRAPAPLPGNRVPPHAAGSFSQSPL 106
+P+ P P +S P R +PP + SP P P PGNR GS QSPL
Sbjct: 187 VPSTPRPIQS-SPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPL 240
Score = 30.4 bits (67), Expect = 0.32
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 18 PMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRLAPPRS 77
P P +R GP S + RL RN + ++ P P+P RS L PP S
Sbjct: 309 PPPPPSRPGPPPLPPSSSGNDET--PRLPQRNLSLSSSTPPLPSPGRSGP----LPPPPS 362
Query: 78 RRSPLRAPAPLPGNRVPPHAAGSFSQSP 105
R P P R PP +G P
Sbjct: 363 ERPP-------PPVRDPPGRSGPLPPPP 383
Score = 28.9 bits (63), Expect = 0.93
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 57 PAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLR 107
P P PS P P R P RS PL P P+ N A + Q P R
Sbjct: 356 PLPPPPSERPPPPVRDPPGRS--GPLPPPPPVSRNGSTSRALPATPQLPSR 404
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 57 PAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNR---VPP 95
P+ P P P R PP +R+ + P P G++ +PP
Sbjct: 144 PSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPP 185
Score = 27.3 bits (59), Expect = 2.7
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 14/89 (15%)
Query: 21 PVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRLAPPRSRRS 80
P R+ P R L P ++RN + ALPA P + P S +P R
Sbjct: 367 PPVRDPPGRSGPLPPPPP-------VSRNGSTSRALPATP---QLPSRSGVDSPRSGPRP 416
Query: 81 PLRAPAPLPGNRVPPHAAGS----FSQSP 105
PL P G PP + S F SP
Sbjct: 417 PLPPDRPSAGAPPPPPPSTSIRNGFQDSP 445
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 35.0 bits (79), Expect = 0.013
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 56 LPAAPAPSRSPDPSKRLAPP----RSRRSPLRAPAPLPGNRVPPHAAGSFSQSPL 106
+P+ P P +S P R +PP + SP P P PGNR GS QSPL
Sbjct: 187 VPSTPRPIQS-SPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPL 240
Score = 30.4 bits (67), Expect = 0.32
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 18 PMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRLAPPRS 77
P P +R GP S + RL RN + ++ P P+P RS L PP S
Sbjct: 309 PPPPPSRPGPPPLPPSSSGNDET--PRLPQRNLSLSSSTPPLPSPGRSGP----LPPPPS 362
Query: 78 RRSPLRAPAPLPGNRVPPHAAGSFSQSP 105
R P P R PP +G P
Sbjct: 363 ERPP-------PPVRDPPGRSGPLPPPP 383
Score = 28.9 bits (63), Expect = 0.93
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 57 PAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLR 107
P P PS P P R P RS PL P P+ N A + Q P R
Sbjct: 356 PLPPPPSERPPPPVRDPPGRS--GPLPPPPPVSRNGSTSRALPATPQLPSR 404
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 57 PAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNR---VPP 95
P+ P P P R PP +R+ + P P G++ +PP
Sbjct: 144 PSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPP 185
Score = 27.3 bits (59), Expect = 2.7
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 14/89 (15%)
Query: 21 PVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRLAPPRSRRS 80
P R+ P R L P ++RN + ALPA P + P S +P R
Sbjct: 367 PPVRDPPGRSGPLPPPPP-------VSRNGSTSRALPATP---QLPSRSGVDSPRSGPRP 416
Query: 81 PLRAPAPLPGNRVPPHAAGS----FSQSP 105
PL P G PP + S F SP
Sbjct: 417 PLPPDRPSAGAPPPPPPSTSIRNGFQDSP 445
>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
Length = 1047
Score = 35.0 bits (79), Expect = 0.013
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 52 ACAALPAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPG 90
A A APAP+ SP P++ A P S R P APAP+ G
Sbjct: 713 AVAVASPAPAPAPSPAPARAQA-PASARDPAPAPAPVAG 750
Score = 29.3 bits (64), Expect = 0.71
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 15 PHWPMAPVA-REGPARRAG-LRSPRERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRL 72
P P+ P+ +G +AG L SP RQ + A P AP +P P +L
Sbjct: 300 PALPLQPLGGHKGTGYQAGGLGSPYLRQQAAQAPYIPPLGLDAYPYPSAPLPAPSPGLKL 359
Query: 73 APPRSRRSPL 82
PP + R PL
Sbjct: 360 EPPLTPRCPL 369
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 35.0 bits (79), Expect = 0.013
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 54 AALPAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQS 104
+++P P+PS P + +SR P+ +PA +PG+++PP GS S+S
Sbjct: 671 SSIPGGPSPSPVGSP---VGSNQSRSGPI-SPASIPGSQMPPQPPGSQSES 717
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 35.0 bits (79), Expect = 0.013
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 54 AALPAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQS 104
+++P P+PS P + +SR P+ +PA +PG+++PP GS S+S
Sbjct: 658 SSIPGGPSPSPVGSP---VGSNQSRSGPI-SPASIPGSQMPPQPPGSQSES 704
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 35.0 bits (79), Expect = 0.013
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 54 AALPAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQS 104
+++P P+PS P + +SR P+ +PA +PG+++PP GS S+S
Sbjct: 658 SSIPGGPSPSPVGSP---VGSNQSRSGPI-SPASIPGSQMPPQPPGSQSES 704
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 38 ERQWRRRLLARNCTACAALPAAPAPSRSPD-PSKRLAPPRSRRSPLRAPAPLPGNRVPPH 96
+R +R R CT A P+R P+ PS R PP R + AP P PG P
Sbjct: 10 DRAFRPRGATPTCTPAQPSWARLRPTRPPEPPSTRQRPPGPRENSPVAPGP-PGGAAAPG 68
Query: 97 AAGSFSQ 103
AG+ Q
Sbjct: 69 GAGTTPQ 75
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 34.7 bits (78), Expect = 0.017
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 18 PMAPVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSP------DPSKR 71
PM AR A A + ER+ R AR C+ + + PSR+P +
Sbjct: 192 PMPRAARSARAATAARAAAAEREEAREERARGCSEASRTSSDSGPSRAPAARVVGGEAAA 251
Query: 72 LAPPRSR-RSPLRAPAPLP 89
A R+R R+PL A +P+P
Sbjct: 252 TAAARARPRAPLAAGSPVP 270
>gi|239745123 PREDICTED: hypothetical protein XP_002343373 [Homo
sapiens]
Length = 205
Score = 34.7 bits (78), Expect = 0.017
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 14/91 (15%)
Query: 30 RAGLRSPRERQWRRRLLARN------CTACAALPAAPAPSRS-------PDPSKRLAPPR 76
R GL + ER R L+A N C L A R P P ++PP
Sbjct: 16 RQGLFADAERHRLRFLVAWNGAEGKLAVTCHDLTAQQPQRREGARLGLEPKPKAAVSPP- 74
Query: 77 SRRSPLRAPAPLPGNRVPPHAAGSFSQSPLR 107
S R P + P P P PP+ AG FS + R
Sbjct: 75 SCRVPAQLPCPRPAAVFPPNWAGRFSAAGFR 105
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 20 APVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPD---PSKRLAPPR 76
+P EGP +R R + + A PA P P + P KR PPR
Sbjct: 1092 SPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPR 1151
Query: 77 SRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRR 108
P R P P R PP +G+ S +P R+
Sbjct: 1152 PVAPPTR---PAPPQR-PPPPSGARSPAPTRK 1179
Score = 31.2 bits (69), Expect = 0.19
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 5 KTSTVLEEVMPHWPMAPVAREGPARRAG----LRSPRERQWRRRLLARNCTACAALPAAP 60
++ T+ E +P P+ P P+R G SP + Q L ++ PA P
Sbjct: 1091 QSPTISEGPVPSLPIRP--SRAPSRTPGPPSAQSSPIDAQPATPLPQKD-------PAQP 1141
Query: 61 APSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVP 94
+ P P + +APP +R +P + P P G R P
Sbjct: 1142 LEPKRPPPPRPVAPP-TRPAPPQRPPPPSGARSP 1174
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 57 PAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPP 95
P AP P P +R PP RSP G PP
Sbjct: 1150 PRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPP 1188
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 20 APVAREGPARRAGLRSPRERQWRRRLLARNCTACAALPAAPAPSRSPD---PSKRLAPPR 76
+P EGP +R R + + A PA P P + P KR PPR
Sbjct: 1092 SPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPR 1151
Query: 77 SRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRR 108
P R P P R PP +G+ S +P R+
Sbjct: 1152 PVAPPTR---PAPPQR-PPPPSGARSPAPTRK 1179
Score = 31.2 bits (69), Expect = 0.19
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 5 KTSTVLEEVMPHWPMAPVAREGPARRAG----LRSPRERQWRRRLLARNCTACAALPAAP 60
++ T+ E +P P+ P P+R G SP + Q L ++ PA P
Sbjct: 1091 QSPTISEGPVPSLPIRP--SRAPSRTPGPPSAQSSPIDAQPATPLPQKD-------PAQP 1141
Query: 61 APSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVP 94
+ P P + +APP +R +P + P P G R P
Sbjct: 1142 LEPKRPPPPRPVAPP-TRPAPPQRPPPPSGARSP 1174
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 57 PAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPP 95
P AP P P +R PP RSP G PP
Sbjct: 1150 PRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPP 1188
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 34.3 bits (77), Expect = 0.022
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 52 ACAALPAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRL 109
A L P+P SP S PP PL AP PL + PP A + + PL+ L
Sbjct: 475 AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP-PLQLAKPPPQAPPALATPPLQAL 531
Score = 33.1 bits (74), Expect = 0.049
Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 12/98 (12%)
Query: 20 APVAREGPARRAGLRSPRERQWRRRLL-----ARNCTACAALPAAPAPSRSPDPS----- 69
+P AR P+ GL+ P R AR+ + P APA P P
Sbjct: 221 SPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQAL 280
Query: 70 --KRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSP 105
++ PPR +P P P +A SQ+P
Sbjct: 281 RPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAP 318
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 57 PAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLR 107
P+A PS++P PS P + SP +P P PP A + PL+
Sbjct: 462 PSATPPSQAP-PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 511
Score = 25.8 bits (55), Expect = 7.8
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 24/102 (23%)
Query: 18 PMAPVAREGPARRAGLRSP-RERQWRRRLL----------ARNCTACAALPAAPAPSRSP 66
P++ AR GP+ R R+P Q + + L R A A P + +P +P
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP 307
Query: 67 DPSKRL---APPRSRRSP--------LRAPAPL--PGNRVPP 95
PS L APP +P L P PL P PP
Sbjct: 308 SPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPP 349
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 34.3 bits (77), Expect = 0.022
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 21 PVAREGPARRAGLRSPR-ERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRLAPPRSRR 79
P RR R PR R RR R A A P P P+ +P PS+R PP R
Sbjct: 157 PARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPTGPRPTGAP-PSRRTPPP-GPR 214
Query: 80 SPLRAP 85
PLR+P
Sbjct: 215 RPLRSP 220
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 34.3 bits (77), Expect = 0.022
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 21 PVAREGPARRAGLRSPR-ERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRLAPPRSRR 79
P RR R PR R RR R A A P P P+ +P PS+R PP R
Sbjct: 157 PARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPTGPRPTGAP-PSRRTPPP-GPR 214
Query: 80 SPLRAP 85
PLR+P
Sbjct: 215 RPLRSP 220
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 34.3 bits (77), Expect = 0.022
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 52 ACAALPAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLRRL 109
A L P+P SP S PP PL AP PL + PP A + + PL+ L
Sbjct: 436 AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP-PLQLAKPPPQAPPALATPPLQAL 492
Score = 31.6 bits (70), Expect = 0.14
Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 13/92 (14%)
Query: 20 APVAREGPARRAGLRSPRERQWRRRLL-----ARNCTACAALPAAPAPSRSPDPSKRLAP 74
+P AR P+ GL+ P R AR+ + P APA P P A
Sbjct: 212 SPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA- 270
Query: 75 PRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPL 106
LR P P + A G S SPL
Sbjct: 271 -------LRPPQVTPPRKDAAPALGPLSSSPL 295
Score = 27.7 bits (60), Expect = 2.1
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 14/101 (13%)
Query: 18 PMAPVAREGPARRAGLRSP-RERQWRRRLL----------ARNCTACAALPAAPAPSRSP 66
P++ AR GP+ R R+P Q + + L R A A P + +P +P
Sbjct: 239 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP 298
Query: 67 DPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLR 107
PS APP P P P P A S L+
Sbjct: 299 SPS---APPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQ 336
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 57 PAAPAPSRSPDPSKRLAPPRSRRSPLRAPAPLPGNRVPPHAAGSFSQSPLR 107
P+A PS++P PS P + SP +P P PP A + PL+
Sbjct: 423 PSATPPSQAP-PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 472
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 34.3 bits (77), Expect = 0.022
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 21 PVAREGPARRAGLRSPR-ERQWRRRLLARNCTACAALPAAPAPSRSPDPSKRLAPPRSRR 79
P RR R PR R RR R A A P P P+ +P PS+R PP R
Sbjct: 157 PARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPTGPRPTGAP-PSRRTPPP-GPR 214
Query: 80 SPLRAP 85
PLR+P
Sbjct: 215 RPLRSP 220
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 34.3 bits (77), Expect = 0.022
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 19 MAPVA-REGPARRAGL-RSPRERQWRRRLLARNCTACAAL--PAAPAPSRSPDPSKRLAP 74
+ PV+ REGP+ + L RSPR+ C+A + L P+ P + SP K
Sbjct: 751 LEPVSWREGPSGHSTLPRSPRDAP---------CSASSELSGPSTPLHTSSPVQGKESTR 801
Query: 75 PRSRRSPLRAPAP--LPGNRVPPHAAGSFSQSP 105
+ RSP AP PG +PP + ++P
Sbjct: 802 RQDTRSPTSAPTQRLSPGEALPPVSQAGTGKAP 834
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.131 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,681,647
Number of Sequences: 37866
Number of extensions: 362948
Number of successful extensions: 5616
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 598
Number of HSP's that attempted gapping in prelim test: 4039
Number of HSP's gapped (non-prelim): 1997
length of query: 110
length of database: 18,247,518
effective HSP length: 80
effective length of query: 30
effective length of database: 15,218,238
effective search space: 456547140
effective search space used: 456547140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.