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Search of human proteins with 239750538
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750538 PREDICTED: hypothetical protein XP_002347438 [Homo
sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756018 PREDICTED: similar to hCG1790963 [Homo sapiens] 412 e-116
gi|239750538 PREDICTED: hypothetical protein XP_002347438 [Homo ... 412 e-116
gi|239744837 PREDICTED: hypothetical protein XP_002343283 [Homo ... 406 e-114
gi|163644316 hypothetical protein LOC23255 [Homo sapiens] 133 1e-31
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 43 2e-04
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 38 0.005
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 37 0.008
gi|5174519 SMAD family member 9 isoform b [Homo sapiens] 37 0.011
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 37 0.014
gi|187828357 SMAD family member 9 isoform a [Homo sapiens] 36 0.018
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 36 0.024
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 35 0.053
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 35 0.053
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 35 0.053
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 35 0.053
gi|71274178 developing brain homeobox 1 [Homo sapiens] 35 0.053
gi|54607077 ankyrin repeat domain 57 [Homo sapiens] 35 0.053
gi|4885185 distal-less homeobox 3 [Homo sapiens] 34 0.070
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 34 0.070
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 34 0.091
gi|66730423 hypothetical protein LOC389384 [Homo sapiens] 34 0.091
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 33 0.12
gi|163965366 nascent polypeptide-associated complex alpha subuni... 33 0.12
gi|75677612 leucine rich repeat containing 37, member A3 [Homo s... 33 0.12
gi|59806363 hypothetical protein LOC9729 [Homo sapiens] 33 0.16
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro... 33 0.16
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro... 33 0.16
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 33 0.16
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 33 0.16
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 33 0.16
>gi|239756018 PREDICTED: similar to hCG1790963 [Homo sapiens]
Length = 196
Score = 412 bits (1059), Expect = e-116
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH 60
MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH
Sbjct: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH 60
Query: 61 SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP
Sbjct: 61 SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
Query: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK
Sbjct: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
Query: 181 HTAAECSTCETEMFLK 196
HTAAECSTCETEMFLK
Sbjct: 181 HTAAECSTCETEMFLK 196
>gi|239750538 PREDICTED: hypothetical protein XP_002347438 [Homo
sapiens]
Length = 196
Score = 412 bits (1059), Expect = e-116
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH 60
MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH
Sbjct: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH 60
Query: 61 SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP
Sbjct: 61 SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
Query: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK
Sbjct: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
Query: 181 HTAAECSTCETEMFLK 196
HTAAECSTCETEMFLK
Sbjct: 181 HTAAECSTCETEMFLK 196
>gi|239744837 PREDICTED: hypothetical protein XP_002343283 [Homo
sapiens]
Length = 196
Score = 406 bits (1044), Expect = e-114
Identities = 194/196 (98%), Positives = 195/196 (99%)
Query: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH 60
MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLE+AVKEERRQAAHGPPGPHSDSH
Sbjct: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSH 60
Query: 61 SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
SLRDTAEPGAMEELPCSALV SLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP
Sbjct: 61 SLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
Query: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK
Sbjct: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
Query: 181 HTAAECSTCETEMFLK 196
HTAAECSTCETEMFLK
Sbjct: 181 HTAAECSTCETEMFLK 196
>gi|163644316 hypothetical protein LOC23255 [Homo sapiens]
Length = 1586
Score = 133 bits (334), Expect = 1e-31
Identities = 63/72 (87%), Positives = 66/72 (91%)
Query: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH 60
MCREEGGEGTP +QDL AP GYTLTENVARILN+KLLEHA+KEERRQAAHGPPG HSDSH
Sbjct: 1503 MCREEGGEGTPVKQDLSAPPGYTLTENVARILNKKLLEHALKEERRQAAHGPPGLHSDSH 1562
Query: 61 SLRDTAEPGAME 72
SL DTAEPG ME
Sbjct: 1563 SLGDTAEPGPME 1574
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 42.7 bits (99), Expect = 2e-04
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 52 PPGPHSDSHS-LRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAAS 110
PP S HS L + P A + PC A+ PS + E ++ P A +P A
Sbjct: 306 PPDKSSPCHSQLLEAQTPEASQASPCPAVTPSAPSAALPDEGSRHTPSPGLPAEGAPEAP 365
Query: 111 QPQSPGDPTPLEQHSGEEPSEEKP 134
+P SP P LE HS ++P P
Sbjct: 366 RPSSP-PPEVLEPHSLDQPPATSP 388
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 38.1 bits (87), Expect = 0.005
Identities = 30/77 (38%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 45 RRQAAHGPPGPHSD-----SHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPP 99
RR+ A GPP P S+ SL D AEPG LP S TC SER A P
Sbjct: 82 RRRRAGGPPRPMSEPGAGAGSSLLDVAEPGGPGWLPESDC--ETVTCCLFSERDAAGAPR 139
Query: 100 SRWAPYSPAASQPQSPG 116
P + AA +P G
Sbjct: 140 DASDPLAGAALEPAGGG 156
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 37.4 bits (85), Expect = 0.008
Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 53 PGPHSDSHSLRDTAEPGAMEELPCSALV---PSLETCFSSSERPANSRPPSRWAPYSPAA 109
P P S S S P A P P T + S PA P ++ P+ P
Sbjct: 199 PSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSPPPA---PEQKYDPFEPTG 255
Query: 110 SQP-QSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQ 145
S P S G P+P E+ EE EE+ + GLSQ
Sbjct: 256 SNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQ 292
>gi|5174519 SMAD family member 9 isoform b [Homo sapiens]
Length = 430
Score = 37.0 bits (84), Expect = 0.011
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 13/86 (15%)
Query: 56 HSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSP 115
HS+ + P + ++ PCSAL PS FS S P + P+SP SP
Sbjct: 166 HSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQS-------PCTASYPHSPG-----SP 213
Query: 116 GDPTPLEQHSGEEP-SEEKPHHDASL 140
+P QHS P E+P H S+
Sbjct: 214 SEPESPYQHSDFRPVCYEEPQHWCSV 239
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 36.6 bits (83), Expect = 0.014
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 23/117 (19%)
Query: 53 PGPHSDSHSLRDTAEPGA-MEELPCSALV---PSLETCFSS---------------SERP 93
PGP H L DT P + +P A+ P+L++ SS S P
Sbjct: 1586 PGP---PHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAP 1642
Query: 94 ANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLS 150
+ PP AP +PA + PQ PG P SG E + + D L +S ++LS
Sbjct: 1643 GDPHPPGPPAPAAPAPAAPQ-PGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLS 1698
Score = 28.9 bits (63), Expect = 2.9
Identities = 37/139 (26%), Positives = 51/139 (36%), Gaps = 9/139 (6%)
Query: 21 GYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALV 80
G TL V + ++ AV ++ Q A P P S T+E ME A V
Sbjct: 746 GNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPPTISLRSKSMTSELEEMEYEQQPAPV 805
Query: 81 PSLETCFSSSERPANSRPP-SRWAPYSPAASQPQSPGDPTPLEQHSGE----EPSEEKPH 135
PS+E + + N A + +AS+ PG L +H + S PH
Sbjct: 806 PSMEKKRTVYQMALNKLDEILAAAQQTISASESPGPGGLASLGKHRPKGFFATESSFDPH 865
Query: 136 HDASLHGLSQYNSLSFAQP 154
H A Y SF P
Sbjct: 866 HRAQ----PSYERPSFLPP 880
>gi|187828357 SMAD family member 9 isoform a [Homo sapiens]
Length = 467
Score = 36.2 bits (82), Expect = 0.018
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 56 HSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAA-SQPQS 114
HS+ + P + ++ PCSAL PS FS S P + P+SP + S+P+S
Sbjct: 166 HSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQS-------PCTASYPHSPGSPSEPES 218
Query: 115 P----GDPTPLEQHSGE 127
P D PL H+ E
Sbjct: 219 PYQHSVDTPPLPYHATE 235
>gi|238624188 diffuse panbronchiolitis critical region 1 protein [Homo
sapiens]
Length = 1393
Score = 35.8 bits (81), Expect = 0.024
Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 14/165 (8%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSD-SHSLR 63
E GE TP ++ P TE+ RI N K A + HG + D + S
Sbjct: 923 EHGERTPLANEITTPSRAEPTEHGERIANEK----ATPSPAKPTEHGETTVNEDTTPSSA 978
Query: 64 DTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTPLEQ 123
+ E G L S ER AN + +P+ ++P G+ TP
Sbjct: 979 EPTENGERTPLANENTTTSPTESTEHGERTANEKT-------TPSPAEPTEHGERTP-SA 1030
Query: 124 HSGEEPSEEKP-HHDASLHGLSQYNSLSFAQPHHRHERNSAQKER 167
+ PS KP H+ ++ + S +P E+ + E+
Sbjct: 1031 NEKTIPSPAKPTEHEEMTPSANENTTPSPVKPTEHGEKTTLANEK 1075
Score = 33.9 bits (76), Expect = 0.091
Identities = 43/195 (22%), Positives = 67/195 (34%), Gaps = 13/195 (6%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVK--EERRQAAHGPPGPHSDSHSL 62
E E T P+P G T EN N K V+ E R A+ P +
Sbjct: 443 ENRERTANENTTPSPAGPT--ENRETTANEKTTLSPVEPTENRETTANEKTTPSPAEPTE 500
Query: 63 RDTAEPGAMEELPCSALVPSL---------ETCFSSSERPANSRPPSRWAPYSPAASQPQ 113
P A E+ S+ P+ E S P +R + +P+ ++P
Sbjct: 501 NGQRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPT 560
Query: 114 SPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKV 173
GD TPL E + ++ + S A+P ER E ++
Sbjct: 561 ENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPA 620
Query: 174 KECFFKKHTAAECST 188
+ ++ TA E +T
Sbjct: 621 EPTENRERTANENTT 635
Score = 31.2 bits (69), Expect = 0.59
Identities = 47/181 (25%), Positives = 65/181 (35%), Gaps = 29/181 (16%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVAR--ILNRKLLEHAVK----EERRQAAHG--PPGPH 56
E G+ TP + P TEN R N K + + EER A+ P P
Sbjct: 561 ENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPA 620
Query: 57 SDSHSLRDTAEP-------GAMEELPCSA-----LVPSLETCFSSSERPANSRPPSRWAP 104
+ + TA G E +A L P+ T + ER AN + S
Sbjct: 621 EPTENRERTANENTTPSPAGPTENREMTANEKTTLFPAEPT--ENRERTANEKTTS---- 674
Query: 105 YSPAASQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQ 164
SPA +P G TP S E H ++ +LS A+P ER + +
Sbjct: 675 -SPA--EPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTLSPAEPTENRERTANE 731
Query: 165 K 165
K
Sbjct: 732 K 732
Score = 31.2 bits (69), Expect = 0.59
Identities = 32/152 (21%), Positives = 52/152 (34%), Gaps = 8/152 (5%)
Query: 38 EHAVKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSA-LVPSLETCFSSSERPANS 96
E HG P ++ ++ AEP E + P + ER AN
Sbjct: 691 EKTTSSSAEPTEHGERTPLANENTTLSPAEPTENRERTANEKTTPFPAEPTENRERTANE 750
Query: 97 RPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHH 156
+P+ +QP GD TPL E + ++ + S A+P
Sbjct: 751 NT-------TPSPAQPTENGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAEPTE 803
Query: 157 RHERNSAQKERSSFLKVKECFFKKHTAAECST 188
ER E ++ + ++ TA E +T
Sbjct: 804 HAERTPLANENTTSSPAEPTENRERTANEKTT 835
Score = 30.4 bits (67), Expect = 1.0
Identities = 35/166 (21%), Positives = 57/166 (34%), Gaps = 10/166 (6%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRD 64
E E T + P+P T N K + + HG P ++ ++
Sbjct: 481 ENRETTANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPTE----HGERTPLANENTTPS 536
Query: 65 TAEPGAMEELPCSALVPSLETCFSSSERPANS-RPPSRWAPYSPAASQPQSPGDPTPLEQ 123
AEP E + +T S +E N R P +P+ ++P G TP
Sbjct: 537 PAEPTENRERTANE-----KTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFAN 591
Query: 124 HSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSS 169
S E H+ ++ + S A+P ER + + S
Sbjct: 592 EKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPS 637
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 34.7 bits (78), Expect = 0.053
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 40 AVKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPP 99
A+K + H PP H L ++P LP S P T + P S PP
Sbjct: 414 ALKPLSSLSTHHPPSAHPPPLQLMPQSQP-----LPSSPAQPPGLTQSQNLPPPPASHPP 468
Query: 100 S---RWAPYSPAASQPQSPGDPTPL 121
+ + AP P A P PG P P+
Sbjct: 469 TGLHQVAPQPPFAQHPFVPGGPPPI 493
Score = 30.4 bits (67), Expect = 1.0
Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 20/116 (17%)
Query: 41 VKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERP------- 93
+ ++ R + P P + +A+ ++ P + P+ T SS P
Sbjct: 150 IDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPT 209
Query: 94 ------ANSRPPSRWAPYSPAASQPQSPGDPTP---LEQ----HSGEEPSEEKPHH 136
A + PP S A +QPQ+P P P ++Q H PS P H
Sbjct: 210 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPH 265
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 34.7 bits (78), Expect = 0.053
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 40 AVKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPP 99
A+K + H PP H L ++P LP S P T + P S PP
Sbjct: 968 ALKPLSSLSTHHPPSAHPPPLQLMPQSQP-----LPSSPAQPPGLTQSQNLPPPPASHPP 1022
Query: 100 S---RWAPYSPAASQPQSPGDPTPL 121
+ + AP P A P PG P P+
Sbjct: 1023 TGLHQVAPQPPFAQHPFVPGGPPPI 1047
Score = 30.4 bits (67), Expect = 1.0
Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 20/116 (17%)
Query: 41 VKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERP------- 93
+ ++ R + P P + +A+ ++ P + P+ T SS P
Sbjct: 704 IDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPT 763
Query: 94 ------ANSRPPSRWAPYSPAASQPQSPGDPTP---LEQ----HSGEEPSEEKPHH 136
A + PP S A +QPQ+P P P ++Q H PS P H
Sbjct: 764 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPH 819
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 34.7 bits (78), Expect = 0.053
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 40 AVKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPP 99
A+K + H PP H L ++P LP S P T + P S PP
Sbjct: 968 ALKPLSSLSTHHPPSAHPPPLQLMPQSQP-----LPSSPAQPPGLTQSQNLPPPPASHPP 1022
Query: 100 S---RWAPYSPAASQPQSPGDPTPL 121
+ + AP P A P PG P P+
Sbjct: 1023 TGLHQVAPQPPFAQHPFVPGGPPPI 1047
Score = 30.4 bits (67), Expect = 1.0
Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 20/116 (17%)
Query: 41 VKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERP------- 93
+ ++ R + P P + +A+ ++ P + P+ T SS P
Sbjct: 704 IDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPT 763
Query: 94 ------ANSRPPSRWAPYSPAASQPQSPGDPTP---LEQ----HSGEEPSEEKPHH 136
A + PP S A +QPQ+P P P ++Q H PS P H
Sbjct: 764 PGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPH 819
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 34.7 bits (78), Expect = 0.053
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 89 SSERPANSRPPSRWAPY---SPAASQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQ 145
S E P+ + P + A +PA P SP P+ Q E P D +L G
Sbjct: 125 SEEEPSGKKAPVQAAKLPSPAPARKPPLSPAQTNPVVQRRNEGAGGPPPKTDQALAGSLV 184
Query: 146 YNSLSFAQPH----HRHERNSAQKERSSFLKVKECFFKKHTAAECSTCETEMFL 195
++ H RH + RS F + K+C H+ A +T E F+
Sbjct: 185 SSTCGVCGKHVHLVQRHLADGRLYHRSCF-RCKQCSCTLHSGAYKATGEPGTFV 237
>gi|71274178 developing brain homeobox 1 [Homo sapiens]
Length = 382
Score = 34.7 bits (78), Expect = 0.053
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 45 RRQAAHGPPGPHSDSHSLRDTAEPGA----MEELPCSALVPSLETCFSSSERPANSRPPS 100
R Q PH D L D + G EE P S PS + +S P + R P
Sbjct: 290 REQTLPTKLNPHPD---LSDVGQKGPGNEEEEEGPGS---PSHRLAYHASSDPQHLRDPR 343
Query: 101 RWAPYSPAASQPQSPGDPTPLEQHSGEEPSEEK 133
P P+ + SPG P+ EE EE+
Sbjct: 344 LPGPLPPSPAHSSSPGKPSDFSDSEEEEEGEEQ 376
>gi|54607077 ankyrin repeat domain 57 [Homo sapiens]
Length = 525
Score = 34.7 bits (78), Expect = 0.053
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 18/106 (16%)
Query: 45 RRQAAHGPPGPHSDSHSLRDTAEPGA---------MEELPCSALVPSLETC---FSSSER 92
+++ GP P D ++ TAEP A + LP +A SL E
Sbjct: 80 KKRFCEGPSEPSGDPPRIQVTAEPEAPDGPAGPEARDRLPDAAAPESLPGQGRELGEGEP 139
Query: 93 PANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSE--EKPHH 136
PA P+ W P S A + S D PL + PSE E P H
Sbjct: 140 PA----PAHWPPLSAGARRKNSRRDVQPLPRTPAPGPSEDLELPPH 181
>gi|4885185 distal-less homeobox 3 [Homo sapiens]
Length = 287
Score = 34.3 bits (77), Expect = 0.070
Identities = 36/124 (29%), Positives = 45/124 (36%), Gaps = 16/124 (12%)
Query: 11 PARQDLPAPRGYTLTENVARILNRKL------------LEHAVKEERRQAAHGPPGP--- 55
P R +L A G T T+ NR+ LEH+ A + PP P
Sbjct: 157 PERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALW 216
Query: 56 HSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPAN-SRPPSRWAPYSPAASQPQS 114
+ SHS A LP SA L+ +S N S P + P PA S
Sbjct: 217 DTSSHSTPAPARSQLPPPLPYSASPSYLDDPTNSWYHAQNLSGPHLQQQPPQPATLHHAS 276
Query: 115 PGDP 118
PG P
Sbjct: 277 PGPP 280
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 34.3 bits (77), Expect = 0.070
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Query: 37 LEHAVKEERRQAAHGPPGPHSDSHSLRDTAEPGAMEE---LPCSALVPSLETCFSSSERP 93
L+ +E++ + G + ++ + P A +E LP L P + P
Sbjct: 361 LDDEEEEKKEEEEKDKEGEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPP 420
Query: 94 ANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEE 128
+ S PP P P S P P P P Q EE
Sbjct: 421 STSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQEE 455
Score = 29.3 bits (64), Expect = 2.2
Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 2/83 (2%)
Query: 52 PPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQ 111
PP P L P A EE S TC RP + PS+ A A +
Sbjct: 431 PPPPPVSPPPLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLT--PSQRAEREAARAG 488
Query: 112 PQSPGDPTPLEQHSGEEPSEEKP 134
P+ PTP + P E+ P
Sbjct: 489 PEGTSPPTPTPSTATGGPPEDSP 511
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
critical region 1 [Homo sapiens]
Length = 1400
Score = 33.9 bits (76), Expect = 0.091
Identities = 43/195 (22%), Positives = 67/195 (34%), Gaps = 13/195 (6%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVK--EERRQAAHGPPGPHSDSHSL 62
E E T P+P G T EN N K V+ E R A+ P +
Sbjct: 505 ENRERTANENTTPSPAGPT--ENRETTANEKTTLSPVEPTENRETTANEKTTPSPAEPTE 562
Query: 63 RDTAEPGAMEELPCSALVPSL---------ETCFSSSERPANSRPPSRWAPYSPAASQPQ 113
P A E+ S+ P+ E S P +R + +P+ ++P
Sbjct: 563 NGQRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPT 622
Query: 114 SPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKV 173
GD TPL E + ++ + S A+P ER E ++
Sbjct: 623 ENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPA 682
Query: 174 KECFFKKHTAAECST 188
+ ++ TA E +T
Sbjct: 683 EPTENRERTANENTT 697
Score = 30.4 bits (67), Expect = 1.0
Identities = 35/166 (21%), Positives = 57/166 (34%), Gaps = 10/166 (6%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRD 64
E E T + P+P T N K + + HG P ++ ++
Sbjct: 543 ENRETTANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPTE----HGERTPLANENTTPS 598
Query: 65 TAEPGAMEELPCSALVPSLETCFSSSERPANS-RPPSRWAPYSPAASQPQSPGDPTPLEQ 123
AEP E + +T S +E N R P +P+ ++P G TP
Sbjct: 599 PAEPTENRERTANE-----KTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFAN 653
Query: 124 HSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSS 169
S E H+ ++ + S A+P ER + + S
Sbjct: 654 EKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPS 699
Score = 29.3 bits (64), Expect = 2.2
Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 19/179 (10%)
Query: 25 TENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRDTAEPG--------AMEELPC 76
TEN R N K +G P ++ + +AEP A E
Sbjct: 723 TENRERTANEK----TTSSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTL 778
Query: 77 SALVPSLETCFSSSER-------PANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEP 129
S P+ +++E+ P +R + +P+ +QP GD TPL
Sbjct: 779 SPAGPTENRERTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLANEKTTPS 838
Query: 130 SEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKKHTAAECST 188
E + ++ + S A+P ER E ++ + ++ TA E +T
Sbjct: 839 LAEPTENGKRTPFANEKTTSSSAEPTEHAERTPLANENTTSSPAEPTENRERTANEKTT 897
>gi|66730423 hypothetical protein LOC389384 [Homo sapiens]
Length = 652
Score = 33.9 bits (76), Expect = 0.091
Identities = 47/209 (22%), Positives = 74/209 (35%), Gaps = 44/209 (21%)
Query: 7 GEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRDTA 66
G+ Q L + G L N A + +K E +R + P H + R A
Sbjct: 258 GDQWEEEQSLASQLGVALP-NPAPAVRKKSQEKKTSLKRTSKTN--PKKHGSEEAKRGAA 314
Query: 67 EPGAMEELP----------CSALVPSLETCFSSSERPANSRPPSRWAPYSPAA----SQP 112
+ + E P S PS+ + + E P + P+ S+
Sbjct: 315 DVSSPEAWPPKKSSFLPLCVSGHRPSISSSYGLEEPKVQEAPSTEAGAPGPSVLPTPSES 374
Query: 113 QSPGDPTPLE----------------QHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHH 156
Q PG+ PL+ Q + E+ EE+P Q + P
Sbjct: 375 QEPGEELPLDRASEYKEFIQKIISMLQDAEEQQGEEQPQ--------VQQEEVGVENP-A 425
Query: 157 RHERNSAQKERSSFLKVKECFFKKHTAAE 185
H R +Q++RSSF + + KKHT+ E
Sbjct: 426 PHCRRKSQEKRSSFRRA--FYHKKHTSKE 452
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 33.5 bits (75), Expect = 0.12
Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 14/131 (10%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRD 64
E +P ++LPA L E A L+R L E + ++ PP P S S +
Sbjct: 463 EASRLSPPPEELPAS---PLPE--ALHLSRPLEESPLSPPPEESPLSPP-PESSPFSPLE 516
Query: 65 TAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQ-PQSPGDPTPLEQ 123
+ EE P S P+LET S + PP +P SP + P SP P E
Sbjct: 517 ESPLSPPEESPPS---PALETPLSPPPEASPLSPPFEESPLSPPPEELPTSP----PPEA 569
Query: 124 HSGEEPSEEKP 134
P EE P
Sbjct: 570 SRLSPPPEESP 580
Score = 29.6 bits (65), Expect = 1.7
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 50 HGPPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAA 109
H P P S R + P +LP A +P + P PP R SPAA
Sbjct: 4306 HPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPPGR---VSPAA 4362
Query: 110 SQ 111
+Q
Sbjct: 4363 AQ 4364
Score = 28.5 bits (62), Expect = 3.8
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Query: 47 QAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYS 106
QA P H D +P A L P E+C + R S P SR P S
Sbjct: 2356 QALAPSPPSHPDIFRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSLPSDPFSR-VPAS 2414
Query: 107 PAA-SQPQSPGDPTPL 121
P + S QSP P PL
Sbjct: 2415 PQSQSSSQSPLTPRPL 2430
Score = 27.3 bits (59), Expect = 8.5
Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 18/131 (13%)
Query: 7 GEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRDTA 66
G+G P R PR Y ++E+ R+ L AV Q PP P ++SL T
Sbjct: 2897 GQGPPQR-----PRFYPVSEDPHRLAPEGLRGLAVSGLPPQKPSAPPAPEL-NNSLHPTP 2950
Query: 67 EPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQ--PQSPGDPTPLEQH 124
P+L T RP +S R P + A + + P + H
Sbjct: 2951 HTKG----------PTLPTGLELVNRPPSSTELGRPNPLALEAGKLPCEDPELDDDFDAH 3000
Query: 125 SGEEPSEEKPH 135
E EE H
Sbjct: 3001 KALEDDEELAH 3011
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.5 bits (75), Expect = 0.12
Identities = 30/132 (22%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 7 GEGTPARQDLPAPRGYTLTEN---VARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLR 63
G TP+ +P+G TL ++N + + A S R
Sbjct: 863 GAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKAR 922
Query: 64 DTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDP-TPLE 122
T P + P P+ S + + P +WAP PAA+ P G P TP
Sbjct: 923 ATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP 982
Query: 123 QHSGEEPSEEKP 134
+ + P+ P
Sbjct: 983 KGAPTPPAATPP 994
Score = 28.9 bits (63), Expect = 2.9
Identities = 37/145 (25%), Positives = 41/145 (28%), Gaps = 31/145 (21%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRD 64
+GG TP + P P T L L K A PP P
Sbjct: 1252 KGGPATPPPKGAPTPPAATPPS-----LKGGLATPPHKGAPNPAVVTPPSPKG------- 1299
Query: 65 TAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPA-------------ASQ 111
G P A P T S P PP + AP PA A+
Sbjct: 1300 ----GPATSPPKGAPTPPAATPPSPKGSPGT--PPPKGAPTPPAVTPPSPKGTPTLPATT 1353
Query: 112 PQSPGDPTPLEQHSGEEPSEEKPHH 136
P S G PT G P P H
Sbjct: 1354 PSSKGGPTTPSSKEGPTPPAATPSH 1378
Score = 28.9 bits (63), Expect = 2.9
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 75 PCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSE 131
P AL+P T S + PA P AP +P++ + SP TP P E
Sbjct: 1544 PKEALIPPAMTVPSPKKTPAIPTPKE--APATPSSKEASSPPAVTPSTYKGAPSPKE 1598
>gi|75677612 leucine rich repeat containing 37, member A3 [Homo
sapiens]
Length = 1634
Score = 33.5 bits (75), Expect = 0.12
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 64 DTAEPGA-MEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTPLE 122
+ EP A +E P VP +E S SE+ +P + +Q ++PG P
Sbjct: 331 EEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHH 390
Query: 123 QHSGEEPSEEKPHHDAS 139
+ + P + HH AS
Sbjct: 391 EVTVSPPGHHQTHHLAS 407
>gi|59806363 hypothetical protein LOC9729 [Homo sapiens]
Length = 694
Score = 33.1 bits (74), Expect = 0.16
Identities = 15/23 (65%), Positives = 16/23 (69%)
Query: 87 FSSSERPANSRPPSRWAPYSPAA 109
FS RPAN R PSRWA SP+A
Sbjct: 650 FSRPARPANRRLPSRWASRSPSA 672
>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 1 [Homo sapiens]
Length = 1635
Score = 33.1 bits (74), Expect = 0.16
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 64 DTAEPGA-MEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTPLE 122
+ EP A +E P VP +E S SE+ +P + +Q ++PG P
Sbjct: 331 EEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPGQPPEHH 390
Query: 123 QHSGEEPSEEKPHHDAS 139
+ + P + HH AS
Sbjct: 391 EVTVSPPGHHQTHHLAS 407
>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 2 [Homo sapiens]
Length = 1700
Score = 33.1 bits (74), Expect = 0.16
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 64 DTAEPGA-MEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTPLE 122
+ EP A +E P VP +E S SE+ +P + +Q ++PG P
Sbjct: 331 EEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPGQPPEHH 390
Query: 123 QHSGEEPSEEKPHHDAS 139
+ + P + HH AS
Sbjct: 391 EVTVSPPGHHQTHHLAS 407
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.16
Identities = 33/135 (24%), Positives = 46/135 (34%), Gaps = 11/135 (8%)
Query: 13 RQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRDTAEPGAME 72
RQ P P N L + + ++ PP P + S +L D P
Sbjct: 211 RQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP-- 268
Query: 73 ELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQ-------PQSPGDPTPLEQHS 125
P PS+ P N++PP P A+SQ P PG P S
Sbjct: 269 --PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSS 326
Query: 126 GEEPSEEKPHHDASL 140
G + + P + SL
Sbjct: 327 GNDETPRLPQRNLSL 341
Score = 27.3 bits (59), Expect = 8.5
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 89 SSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
S+ RP S P +R +P P + SPG PTP
Sbjct: 189 STPRPIQSSPHNRGSPPVPGGPRQPSPG-PTP 219
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.16
Identities = 33/135 (24%), Positives = 46/135 (34%), Gaps = 11/135 (8%)
Query: 13 RQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSHSLRDTAEPGAME 72
RQ P P N L + + ++ PP P + S +L D P
Sbjct: 211 RQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP-- 268
Query: 73 ELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQ-------PQSPGDPTPLEQHS 125
P PS+ P N++PP P A+SQ P PG P S
Sbjct: 269 --PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSS 326
Query: 126 GEEPSEEKPHHDASL 140
G + + P + SL
Sbjct: 327 GNDETPRLPQRNLSL 341
Score = 27.3 bits (59), Expect = 8.5
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 89 SSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
S+ RP S P +R +P P + SPG PTP
Sbjct: 189 STPRPIQSSPHNRGSPPVPGGPRQPSPG-PTP 219
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 33.1 bits (74), Expect = 0.16
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 13/125 (10%)
Query: 21 GYTLTENVARILNRKLLEHAVKEERRQAA---HGPPGPHSDSHSLRDTAEPGAMEELPCS 77
G + T + AR L E+ + ++RQA P P SL +T P + ++PC
Sbjct: 738 GTSATTHEARPRPLSLSEYRRRRQQRQAETEERSPQPPTGKWPSLPET--PTGLADIPCL 795
Query: 78 ALVPSLETCFSSSERPANSRPPSRWAPYS--PAASQPQSPGDPTPLEQHSGEEPSEEKPH 135
+ P+ +++ A R P P P SP P+ + P+E+ P
Sbjct: 796 VIPPA------PAKKTALQRSPETPLEICLVPVGPSPASPSPEPPVSKPVASSPTEQVPS 849
Query: 136 HDASL 140
+ L
Sbjct: 850 QEMPL 854
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.126 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,342,859
Number of Sequences: 37866
Number of extensions: 585977
Number of successful extensions: 3998
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 3418
Number of HSP's gapped (non-prelim): 910
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.