Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239750480
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750480 PREDICTED: hypothetical protein [Homo sapiens]
(274 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755954 PREDICTED: hypothetical protein [Homo sapiens] 569 e-163
gi|239750480 PREDICTED: hypothetical protein [Homo sapiens] 569 e-163
gi|163965366 nascent polypeptide-associated complex alpha subuni... 51 1e-06
gi|239754289 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239748826 PREDICTED: hypothetical protein XP_002346831 [Homo ... 44 2e-04
gi|239742857 PREDICTED: hypothetical protein XP_002342664 [Homo ... 44 2e-04
gi|239740873 PREDICTED: hypothetical protein XP_002344073 [Homo ... 44 2e-04
gi|239740807 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239513965 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 40 0.002
gi|150378539 piccolo isoform 1 [Homo sapiens] 40 0.002
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 40 0.003
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 40 0.003
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 38 0.011
gi|223468681 v-rel reticuloendotheliosis viral oncogene homolog ... 37 0.014
gi|223468676 v-rel reticuloendotheliosis viral oncogene homolog ... 37 0.014
gi|110832843 TBP-associated factor 4 [Homo sapiens] 37 0.014
gi|116174780 SEC24 related gene family, member A [Homo sapiens] 37 0.019
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 37 0.024
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 37 0.024
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 37 0.024
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 37 0.024
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 37 0.024
gi|134142824 forkhead box D2 [Homo sapiens] 37 0.024
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 36 0.032
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 36 0.032
gi|39780597 PNMA-like 1 isoform a [Homo sapiens] 36 0.032
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 36 0.032
gi|4507831 Unc-51-like kinase 1 [Homo sapiens] 35 0.054
gi|239740757 PREDICTED: hypothetical protein [Homo sapiens] 35 0.054
>gi|239755954 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 569 bits (1467), Expect = e-163
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MSAKIPFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRER 60
MSAKIPFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRER
Sbjct: 1 MSAKIPFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRER 60
Query: 61 ENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
ENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA
Sbjct: 61 ENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
Query: 121 QLSPAGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPRFCIRFTSWQVVS 180
QLSPAGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPRFCIRFTSWQVVS
Sbjct: 121 QLSPAGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPRFCIRFTSWQVVS 180
Query: 181 GFLSVVSAHLGALPFAGRGRNEGSSAGAGQSLVLHRLPTRLQKRLAHWPLGRPPAVSASL 240
GFLSVVSAHLGALPFAGRGRNEGSSAGAGQSLVLHRLPTRLQKRLAHWPLGRPPAVSASL
Sbjct: 181 GFLSVVSAHLGALPFAGRGRNEGSSAGAGQSLVLHRLPTRLQKRLAHWPLGRPPAVSASL 240
Query: 241 STPSTEATVTRSPHPPQNPVLGPHAGEHEAPQGS 274
STPSTEATVTRSPHPPQNPVLGPHAGEHEAPQGS
Sbjct: 241 STPSTEATVTRSPHPPQNPVLGPHAGEHEAPQGS 274
>gi|239750480 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 569 bits (1467), Expect = e-163
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MSAKIPFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRER 60
MSAKIPFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRER
Sbjct: 1 MSAKIPFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRER 60
Query: 61 ENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
ENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA
Sbjct: 61 ENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
Query: 121 QLSPAGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPRFCIRFTSWQVVS 180
QLSPAGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPRFCIRFTSWQVVS
Sbjct: 121 QLSPAGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPRFCIRFTSWQVVS 180
Query: 181 GFLSVVSAHLGALPFAGRGRNEGSSAGAGQSLVLHRLPTRLQKRLAHWPLGRPPAVSASL 240
GFLSVVSAHLGALPFAGRGRNEGSSAGAGQSLVLHRLPTRLQKRLAHWPLGRPPAVSASL
Sbjct: 181 GFLSVVSAHLGALPFAGRGRNEGSSAGAGQSLVLHRLPTRLQKRLAHWPLGRPPAVSASL 240
Query: 241 STPSTEATVTRSPHPPQNPVLGPHAGEHEAPQGS 274
STPSTEATVTRSPHPPQNPVLGPHAGEHEAPQGS
Sbjct: 241 STPSTEATVTRSPHPPQNPVLGPHAGEHEAPQGS 274
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.8 bits (120), Expect = 1e-06
Identities = 47/148 (31%), Positives = 60/148 (40%), Gaps = 20/148 (13%)
Query: 2 SAKIPFPKEGHTHTSPSCILRGSPVSPA----HPRGPVPCVGEQGAPPSPGLSAFRKPSP 57
+A P PK G SP +G+P PA P+G +GAP P ++ PSP
Sbjct: 967 AATPPSPKGGPATPSP----KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTP---PSP 1019
Query: 58 RERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSL 117
+ A +P G S G+ + L T AA P GPAT SL
Sbjct: 1020 K---GSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSL 1076
Query: 118 LAAQLSPAGDTPAPQSHVTHRGPA-PSP 144
A PA P+P+ GPA PSP
Sbjct: 1077 KGAPTPPAATPPSPKG-----GPATPSP 1099
Score = 48.5 bits (114), Expect = 6e-06
Identities = 46/152 (30%), Positives = 61/152 (40%), Gaps = 11/152 (7%)
Query: 2 SAKIPFPKEGHTHTSPSCILRGSPVSPAHPRG-PVPCVGEQGAPPSPGLSAFRKPSPRER 60
+A P PK G SP V+P P+G P +GA P A PSP+
Sbjct: 990 AATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPP---AATPPSPK-- 1044
Query: 61 ENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
A +P+ G + TT T P G + L T AA P GPAT S A
Sbjct: 1045 -GSPAATPLPKG-APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGA 1102
Query: 121 QLSPAGDTPAPQSHVT---HRGPAPSPGWWSP 149
+ PA P+P+ + H+G +P P
Sbjct: 1103 PMPPAATPPSPKGGLATPPHKGAPTTPAATPP 1134
Score = 40.4 bits (93), Expect = 0.002
Identities = 45/152 (29%), Positives = 61/152 (40%), Gaps = 21/152 (13%)
Query: 2 SAKIPFPKEGHTHTSPSCILRGSPVSPA----HPRGPVPCVGEQGAPPSPGLSAFRKPSP 57
+A P PK G P +G+P +PA P+G + +GAP +P A PSP
Sbjct: 1130 AATPPSPKGGLATPPP----KGAPTTPAATPPSPKGGLATPPPKGAPTTP---AATPPSP 1182
Query: 58 RERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSL 117
+ +P G + TT T P G + T AA P G AT S
Sbjct: 1183 KGG----LATPSPKG-APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP 1237
Query: 118 LAAQLSPAGDTPAPQSHVTHRGPAPSPGWWSP 149
A +PA P+P+ GPA P +P
Sbjct: 1238 KGAPTTPAATPPSPKG-----GPATPPPKGAP 1264
Score = 38.5 bits (88), Expect = 0.006
Identities = 43/147 (29%), Positives = 60/147 (40%), Gaps = 16/147 (10%)
Query: 2 SAKIPFPKEGHTHTSPSCILRGSPVSPA----HPRGPVPCVGEQGAPPSPGLSAFRKPSP 57
+A P PK G T P +G+P +PA P+G + +GAP +P A PSP
Sbjct: 1107 AATPPSPKGGLA-TPPH---KGAPTTPAATPPSPKGGLATPPPKGAPTTP---AATPPSP 1159
Query: 58 RERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSL 117
+ +P G + TT T P G + T AA P G AT S
Sbjct: 1160 KGG----LATPPPKG-APTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSP 1214
Query: 118 LAAQLSPAGDTPAPQSHVTHRGPAPSP 144
A +PA P+P+ + P +P
Sbjct: 1215 KGAPTTPAATPPSPKGGLATPSPKGAP 1241
Score = 37.4 bits (85), Expect = 0.014
Identities = 45/164 (27%), Positives = 64/164 (39%), Gaps = 25/164 (15%)
Query: 2 SAKIPFPKEGHTHTSPSCILRGSPVSPA----HPRGPVPCVGEQGAPPSPGLS------A 51
+A P PK G SP +G+P +PA P+G + +GAP +P +
Sbjct: 1176 AATPPSPKGGLATPSP----KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1231
Query: 52 FRKPSPRERENREAVSPIT-YGCSDTTHRRTDPESGAGGSRSLLAEMTT---QHAANARL 107
PSP+ A +P + G T + P A SL + T + A N +
Sbjct: 1232 LATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAV 1291
Query: 108 PDP-----GPATQSLLAAQLSPAGDTPAPQSHVTHRGP--APSP 144
P GPAT A PA P+P+ P AP+P
Sbjct: 1292 VTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTP 1335
Score = 36.2 bits (82), Expect = 0.032
Identities = 39/160 (24%), Positives = 57/160 (35%), Gaps = 17/160 (10%)
Query: 6 PFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCV-------GEQGAPPSPGLSAFRKPSPR 58
P PK T + + +G P +P+ GP P G PPSP PSP+
Sbjct: 1341 PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGP-AIPSPK 1399
Query: 59 ERENREAVSPIT---YGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQ 115
AV P++ + T S + + ++ + A P GPAT
Sbjct: 1400 GDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATP 1459
Query: 116 SLLAAQLSPA------GDTPAPQSHVTHRGPAPSPGWWSP 149
S PA + PAP+ T P +P +P
Sbjct: 1460 SSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAP 1499
Score = 35.8 bits (81), Expect = 0.041
Identities = 41/161 (25%), Positives = 58/161 (36%), Gaps = 23/161 (14%)
Query: 2 SAKIPFPKEGHTHTSPSCILRGSPVSPA----HPRGPVPCVGEQGAPPSPGLS------A 51
+A P PK G SP +G+P +PA P+G + +GAP +P +
Sbjct: 1199 AATPPSPKGGLATPSP----KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1254
Query: 52 FRKPSPRERENREAVSP--ITYGCSDTTHRR-------TDPESGAGGSRSLLAEMTTQHA 102
P P+ A +P + G + H+ T P G + S T A
Sbjct: 1255 PATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPA 1314
Query: 103 ANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTHRGPAPS 143
A P P T A PA P+P+ T PS
Sbjct: 1315 ATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPS 1355
Score = 35.0 bits (79), Expect = 0.071
Identities = 42/147 (28%), Positives = 53/147 (36%), Gaps = 41/147 (27%)
Query: 5 IPFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQG-----APPSP-GLSAFRKPSPR 58
+PFPKEG P +PA + P + A P+P G+ A PSP+
Sbjct: 893 LPFPKEG-------------PATPAPKQAPALSMTSSSPKKARATPAPKGIPA--SPSPK 937
Query: 59 ERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLL 118
A +P P G + T AA P GPAT S
Sbjct: 938 GAPTPPAATP--------------PSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPK 983
Query: 119 AAQLSPAGDTPAPQSHVTHRGPA-PSP 144
A PA P+P+ GPA PSP
Sbjct: 984 GAPTPPAATPPSPKG-----GPATPSP 1005
>gi|239754289 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 43.5 bits (101), Expect = 2e-04
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
R P PR R R + P + P S A +RS A T P
Sbjct: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
Query: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRARLKLAFASRG 164
AT + +A L P + TPAP + VTH G W+PR R R L SRG
Sbjct: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVPRSRG 145
Query: 165 SEPRFCIRFTSWQVVSGFLSVVSAHLG----ALPFAG 197
+ RF+ L V+ HLG A P+ G
Sbjct: 146 KRLQKICRFS--------LLVLRTHLGPDSVASPYVG 174
>gi|239748826 PREDICTED: hypothetical protein XP_002346831 [Homo
sapiens]
Length = 178
Score = 43.5 bits (101), Expect = 2e-04
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
R P PR R R + P + P S A +RS A T P
Sbjct: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
Query: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRARLKLAFASRG 164
AT + +A L P + TPAP + VTH G W+PR R R L SRG
Sbjct: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVPRSRG 145
Query: 165 SEPRFCIRFTSWQVVSGFLSVVSAHLG----ALPFAG 197
+ RF+ L V+ HLG A P+ G
Sbjct: 146 KRLQKICRFS--------LLVLRTHLGPDSVASPYVG 174
>gi|239742857 PREDICTED: hypothetical protein XP_002342664 [Homo
sapiens]
Length = 178
Score = 43.5 bits (101), Expect = 2e-04
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
R P PR R R + P + P S A +RS A T P
Sbjct: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
Query: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRARLKLAFASRG 164
AT + +A L P + TPAP + VTH G W+PR R R L SRG
Sbjct: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVPRSRG 145
Query: 165 SEPRFCIRFTSWQVVSGFLSVVSAHLG----ALPFAG 197
+ RF+ L V+ HLG A P+ G
Sbjct: 146 KRLQKICRFS--------LLVLRTHLGPDSVASPYVG 174
>gi|239740873 PREDICTED: hypothetical protein XP_002344073 [Homo
sapiens]
Length = 178
Score = 43.5 bits (101), Expect = 2e-04
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
R P PR R R + P + P S A +RS A T P
Sbjct: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
Query: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRARLKLAFASRG 164
AT + +A L P + TPAP + VTH G W+PR R R L SRG
Sbjct: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVPRSRG 145
Query: 165 SEPRFCIRFTSWQVVSGFLSVVSAHLG----ALPFAG 197
+ RF+ L V+ HLG A P+ G
Sbjct: 146 KRLQKICRFS--------LLVLRTHLGPDSVASPYVG 174
>gi|239740807 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 43.5 bits (101), Expect = 2e-04
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
R P PR R R + P + P S A +RS A T P
Sbjct: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
Query: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRARLKLAFASRG 164
AT + +A L P + TPAP + VTH G W+PR R R L SRG
Sbjct: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVPRSRG 145
Query: 165 SEPRFCIRFTSWQVVSGFLSVVSAHLG----ALPFAG 197
+ RF+ L V+ HLG A P+ G
Sbjct: 146 KRLQKICRFS--------LLVLRTHLGPDSVASPYVG 174
>gi|239513965 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 43.5 bits (101), Expect = 2e-04
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
R P PR R R + P + P S A +RS A T P
Sbjct: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
Query: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRARLKLAFASRG 164
AT + +A L P + TPAP + VTH G W+PR R R L SRG
Sbjct: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPRDGLVPRSRG 145
Query: 165 SEPRFCIRFTSWQVVSGFLSVVSAHLG----ALPFAG 197
+ RF+ L V+ HLG A P+ G
Sbjct: 146 KRLQKICRFS--------LLVLRTHLGPDSVASPYVG 174
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVS 67
PK+ T SP + P P GP P G+ P + P P+E+ R +++
Sbjct: 855 PKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQ------QSPKPQEQSRRFSLN 908
Query: 68 PITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAAN--ARLPDPGPATQSLLAAQLSPA 125
+ + + T E+ G A + +Q A+N + PGP +QS A P
Sbjct: 909 LGSITDAPKSQPTTPQETVTGKLFGFGASIFSQ-ASNLISTAGQPGPHSQSGPGA---PM 964
Query: 126 GDTPAPQSHVTHRGPAPSPGWWSP 149
PAP T +GP S G P
Sbjct: 965 KQAPAPSQPPTSQGPPKSTGQAPP 988
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 40.4 bits (93), Expect = 0.002
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVS 67
PK+ T SP + P P GP P G+ P + P P+E+ R +++
Sbjct: 855 PKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQ------QSPKPQEQSRRFSLN 908
Query: 68 PITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAAN--ARLPDPGPATQSLLAAQLSPA 125
+ + + T E+ G A + +Q A+N + PGP +QS A P
Sbjct: 909 LGSITDAPKSQPTTPQETVTGKLFGFGASIFSQ-ASNLISTAGQPGPHSQSGPGA---PM 964
Query: 126 GDTPAPQSHVTHRGPAPSPGWWSP 149
PAP T +GP S G P
Sbjct: 965 KQAPAPSQPPTSQGPPKSTGQAPP 988
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 39.7 bits (91), Expect = 0.003
Identities = 65/255 (25%), Positives = 88/255 (34%), Gaps = 48/255 (18%)
Query: 21 LRGSPVSPAHPRGPVP--CVGEQGAPPSPGLSAFRKPSPR-----ERENREAVSPITYGC 73
L +P SPA P P P + PP P LS P P+ R +S ++G
Sbjct: 93 LSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGGLSPDPKPGGAPTSSRRPLLSSPSWG- 151
Query: 74 SDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQS 133
+PE AGG + P PG ++ L A PA P P
Sbjct: 152 ------GPEPEGRAGGG-----------IPGSSSPHPGTGSRRLKVAPPPPA---PKPCK 191
Query: 134 HVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPRFCIRFTSWQVVSGFLSVVSAHLGAL 193
VT G G + A +L++ +PR +S +G + VSA A
Sbjct: 192 TVTTSGAKAGGG------KGAGSRLSWPESEGKPRVKGSKSS----AGTGASVSAAATAA 241
Query: 194 PFAGRGRNEGSSAGAGQSL-VLHRLPTRLQKRLA--------HWPLGRPPAVSASLSTPS 244
G G +S G G +L R K P G PP ++ TPS
Sbjct: 242 AAGGGGSTASTSGGVGAGAGARGKLSPRKGKSKTLDNSDLHPGPPAGSPPPLTLP-PTPS 300
Query: 245 TEATVTRSPHPPQNP 259
VT + P P
Sbjct: 301 PATAVTAASAQPPGP 315
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 39.7 bits (91), Expect = 0.003
Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 12/150 (8%)
Query: 6 PFPKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGA-PPSPGLSAFRKPSPRERENRE 64
P PK+ +SP R +S H +G P + A P P P PR +
Sbjct: 639 PPPKQ---RSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSS 695
Query: 65 AVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPG-----PATQSLLA 119
+ P+ G S + RR P R + + A P P +++S+
Sbjct: 696 SPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSG 755
Query: 120 AQLSPAGDTPAPQSHVTHRGPAPSPGWWSP 149
+ A PAP S V + P+ + WSP
Sbjct: 756 SPEPAAKKPPAPPSPVQSQSPSTN---WSP 782
Score = 29.3 bits (64), Expect = 3.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 216 RLPTRLQKRLAHWPLGRPPAVSASLSTPSTEATVTRSPHPPQNP 259
R+P + R + P+ R SASLS S+ ++ +RS PP+ P
Sbjct: 331 RMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 374
Score = 28.9 bits (63), Expect = 5.1
Identities = 41/172 (23%), Positives = 56/172 (32%), Gaps = 12/172 (6%)
Query: 16 SPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVSPITYGCSD 75
SPS P+ + P P PP P A P P+ R + P S
Sbjct: 590 SPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS--PPPKQRSSP 647
Query: 76 TTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAP---- 131
T RR+ S S+ ++ AR P P + +P P
Sbjct: 648 VTKRRSPSLS----SKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRG 703
Query: 132 QSHVTHRGPAPSPGWWSPRR--RRARLKLAFASRGSEPRFCIRFTSWQVVSG 181
S R +PSP RR R K + P+ R +S + VSG
Sbjct: 704 ASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSG 755
Score = 28.1 bits (61), Expect = 8.6
Identities = 20/75 (26%), Positives = 25/75 (33%)
Query: 79 RRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTHR 138
RR P A S + T+ R P P P + + P P R
Sbjct: 521 RRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRR 580
Query: 139 GPAPSPGWWSPRRRR 153
P+P P SP RR
Sbjct: 581 TPSPPPRRRSPSPRR 595
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 37.7 bits (86), Expect = 0.011
Identities = 64/250 (25%), Positives = 92/250 (36%), Gaps = 55/250 (22%)
Query: 27 SPAHPRGPVPCVGEQGAPPSPG----LSAFRKPSPRERENREAVSPITYGCSDTTHRRTD 82
SPA P P+P + PSPG L++ + P P ++P S T
Sbjct: 1601 SPAPPLAPLPVLA-----PSPGAAPVLASSQTPVP-------VMAP-----SSTPGTSLA 1643
Query: 83 PESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTHRGPAP 142
S +LA +TQ A +P P P+ S L+PA AP
Sbjct: 1644 SASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPA--------------LAP 1689
Query: 143 SPGWWSPRRRRARLKLAFASRGSEPRFCIRFTSWQVVSGFLSVVSAHLGALPFAGRGRNE 202
+ G SP + L+ + + F + S S + + L P
Sbjct: 1690 TLGGSSPSQT-----LSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAP-------- 1736
Query: 203 GSSAGAGQSLVLHRLP-----TRLQKRLAHWPLGRPPAVSASLSTPSTEATVTRSPHPPQ 257
G G Q+L L P + + AH P + SASL P++ T+T SP P
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPV- 1795
Query: 258 NPVLGPHAGE 267
P LGP A +
Sbjct: 1796 -PTLGPAAAQ 1804
>gi|223468681 v-rel reticuloendotheliosis viral oncogene homolog A
isoform 2 [Homo sapiens]
Length = 548
Score = 37.4 bits (85), Expect = 0.014
Identities = 41/137 (29%), Positives = 54/137 (39%), Gaps = 10/137 (7%)
Query: 9 KEGHTHTSPSCILRGSPVS-PAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVS 67
K T+ + I++ SP S P PR P + A PS ++ KP+P+ ++S
Sbjct: 298 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRI----AVPSRSSASVPKPAPQPYPFTSSLS 353
Query: 68 PITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGD 127
I Y D P SG S LA Q A P P PA S LA +P
Sbjct: 354 TINY---DEFPTMVFP-SGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPV 409
Query: 128 -TPAPQSHVTHRGPAPS 143
P P V P P+
Sbjct: 410 LAPGPPQAVAPPAPKPT 426
>gi|223468676 v-rel reticuloendotheliosis viral oncogene homolog A
isoform 1 [Homo sapiens]
Length = 551
Score = 37.4 bits (85), Expect = 0.014
Identities = 41/137 (29%), Positives = 54/137 (39%), Gaps = 10/137 (7%)
Query: 9 KEGHTHTSPSCILRGSPVS-PAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVS 67
K T+ + I++ SP S P PR P + A PS ++ KP+P+ ++S
Sbjct: 301 KRKRTYETFKSIMKKSPFSGPTDPRPPPRRI----AVPSRSSASVPKPAPQPYPFTSSLS 356
Query: 68 PITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGD 127
I Y D P SG S LA Q A P P PA S LA +P
Sbjct: 357 TINY---DEFPTMVFP-SGQISQASALAPAPPQVLPQAPAPAPAPAMVSALAQAPAPVPV 412
Query: 128 -TPAPQSHVTHRGPAPS 143
P P V P P+
Sbjct: 413 LAPGPPQAVAPPAPKPT 429
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 37.4 bits (85), Expect = 0.014
Identities = 37/133 (27%), Positives = 49/133 (36%), Gaps = 18/133 (13%)
Query: 20 ILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVSP----ITYGCSD 75
++ GSP A P G GA P P + +P + SP + G +
Sbjct: 62 VVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAP 121
Query: 76 TTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDP---GPATQSLLAAQLSPAGDTPAPQ 132
+ P G+ GS AA A P+P GPA + AA + AG P P
Sbjct: 122 PAAKLRPPPEGSAGS----CAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGP- 176
Query: 133 SHVTHRGPAPSPG 145
GP P PG
Sbjct: 177 ------GPGPGPG 183
Score = 33.1 bits (74), Expect = 0.27
Identities = 35/136 (25%), Positives = 45/136 (33%), Gaps = 33/136 (24%)
Query: 24 SPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVSPITYGCSDTTHRRTDP 83
+P PA P GP G P PG P P + P G + T +
Sbjct: 153 APAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGK--------PAGPGAAQTLN----- 199
Query: 84 ESGAGGSRSLL--------AEMTTQHAANARLPDPGPA-------TQSLLAAQLSPAGDT 128
GS +LL A + A LP P PA T + A PA
Sbjct: 200 -----GSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAA 254
Query: 129 PAPQSHVTHRGPAPSP 144
P+P + PA +P
Sbjct: 255 PSPPAAPAPAAPAAAP 270
Score = 29.6 bits (65), Expect = 3.0
Identities = 53/237 (22%), Positives = 73/237 (30%), Gaps = 45/237 (18%)
Query: 24 SPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVSPITYGCSDTTHRRTDP 83
+P +P+ P P P PP P A P +P P
Sbjct: 251 APAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAV----------PPP 300
Query: 84 ESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTHRGPAPS 143
+ G + A P P PA PAG + P PAP
Sbjct: 301 AAAQNGGSAGAA------------PAPAPAAG-------GPAGVSGQPGPGAAAAAPAPG 341
Query: 144 PGWWSPRR-RRARLKLAFASRGSEPRFCIRFTSWQVVSGFLSVVSAHLGALPFAGRGRNE 202
SP+R +A A S P + V+ + A+P G
Sbjct: 342 VKAESPKRVVQAAPPAAQTLAASGP---ASTAASMVIGPTMQGALPSPAAVPPPAPGTPT 398
Query: 203 GSSAGAGQSLVLHRLPTRLQKRLAHWPLGRPPAVSASLSTPSTEATVTRSPHPPQNP 259
G GA ++ + L+ P + A+L TP+ A R P PPQNP
Sbjct: 399 GLPKGAAGAVT---------QSLSRTPTATTSGIRATL-TPTVLA--PRLPQPPQNP 443
>gi|116174780 SEC24 related gene family, member A [Homo sapiens]
Length = 1093
Score = 37.0 bits (84), Expect = 0.019
Identities = 44/142 (30%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 111 GPATQSLLAAQLSPAGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPRFC 170
GPA + L A +PA TP P S P P W + + S S+ C
Sbjct: 103 GPAPRMPLPASQNPA-TTPMPSSSFLPEANLPPPLNW---------QYNYPSTASQTNHC 152
Query: 171 IRFTSWQVVSGFLSVVSAHLGALPFAGRGRNEGSSAGAGQS---LVLHRLPTRLQKRLAH 227
R +S VSG S+ + H +G + S +G S LV LPT Q H
Sbjct: 153 PRASSQPTVSGNTSLTTNH--QYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPH 210
Query: 228 W--PLGRPPAVSASLSTPSTEA 247
P G PP V A TP T +
Sbjct: 211 GPPPAGGPPPVRA--LTPLTSS 230
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/137 (23%), Positives = 47/137 (34%), Gaps = 19/137 (13%)
Query: 26 VSPAHPRGPVPCVGEQGAPPSPGLSAFRKP-----------------SPRERENREAVSP 68
++P P P P E+ AP +P +A P P +E
Sbjct: 514 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 573
Query: 69 ITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLA--AQLSPAG 126
G + TT + P + + LA TT+ + P P T A PA
Sbjct: 574 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 633
Query: 127 DTPAPQSHVTHRGPAPS 143
TP + T +G AP+
Sbjct: 634 TTPKEPAPTTPKGTAPT 650
Score = 35.4 bits (80), Expect = 0.054
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 23/155 (14%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAH-----PRGPVPCVGEQGAPPS---PGLSAFRKPSPRE 59
PKE SP+ +P +P P+ P P ++ AP + P + +KP+P
Sbjct: 415 PKE----PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTT 470
Query: 60 REN------REAVSPITYGCSDTTHRR---TDPESGAGGSRSLLAEMTTQHAANARLPDP 110
+ +E + TT + T PE A + LA T + +P
Sbjct: 471 PKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEP 530
Query: 111 GPATQSLLAAQL--SPAGDTPAPQSHVTHRGPAPS 143
P T A PA TP + T + PAP+
Sbjct: 531 APTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 565
Score = 33.9 bits (76), Expect = 0.16
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 20/144 (13%)
Query: 4 KIPFPKE--GHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERE 61
K P PKE T P+ P +P P+G P ++ AP +P ++P+P +
Sbjct: 592 KKPAPKELAPTTTKEPTSTTCDKP-APTTPKGTAPTTPKEPAPTTP-----KEPAPTTPK 645
Query: 62 NREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPAT--QSLLA 119
G + TT + P + + LA TT+ + P P T ++
Sbjct: 646 ----------GTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 695
Query: 120 AQLSPAGDTPAPQSHVTHRGPAPS 143
PA TP + T P P+
Sbjct: 696 TPKEPAPTTPKKPAPTTPETPPPT 719
Score = 30.4 bits (67), Expect = 1.7
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVS 67
PKE T+ + +P P+ P P ++ AP +P A P + +
Sbjct: 275 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 334
Query: 68 PITYGCSDTTHRR---TDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSP 124
P T + TT + T P+ A + A T + A +P P T + +P
Sbjct: 335 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK----EPAP 390
Query: 125 AGDTPAPQSHVTHRGPAPS 143
AP T + PAP+
Sbjct: 391 TTTKSAP---TTTKEPAPT 406
Score = 28.1 bits (61), Expect = 8.6
Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 9/119 (7%)
Query: 4 KIPFPKE--GHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERE 61
K P PKE T P+ P +P P+ P ++ AP +P A P
Sbjct: 661 KKPAPKELAPTTTKGPTSTTSDKP-APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPT 719
Query: 62 NREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
E +P T T H+ D + L AE T + N+ +PG T AA
Sbjct: 720 TSEVSTPTTTKEPTTIHKSPDE-----STPELSAEPTPKALENSP-KEPGVPTTKTPAA 772
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/137 (23%), Positives = 47/137 (34%), Gaps = 19/137 (13%)
Query: 26 VSPAHPRGPVPCVGEQGAPPSPGLSAFRKP-----------------SPRERENREAVSP 68
++P P P P E+ AP +P +A P P +E
Sbjct: 555 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 614
Query: 69 ITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLA--AQLSPAG 126
G + TT + P + + LA TT+ + P P T A PA
Sbjct: 615 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 674
Query: 127 DTPAPQSHVTHRGPAPS 143
TP + T +G AP+
Sbjct: 675 TTPKEPAPTTPKGTAPT 691
Score = 35.4 bits (80), Expect = 0.054
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 23/155 (14%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAH-----PRGPVPCVGEQGAPPS---PGLSAFRKPSPRE 59
PKE SP+ +P +P P+ P P ++ AP + P + +KP+P
Sbjct: 456 PKE----PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTT 511
Query: 60 REN------REAVSPITYGCSDTTHRR---TDPESGAGGSRSLLAEMTTQHAANARLPDP 110
+ +E + TT + T PE A + LA T + +P
Sbjct: 512 PKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEP 571
Query: 111 GPATQSLLAAQL--SPAGDTPAPQSHVTHRGPAPS 143
P T A PA TP + T + PAP+
Sbjct: 572 APTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 606
Score = 33.9 bits (76), Expect = 0.16
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 20/144 (13%)
Query: 4 KIPFPKE--GHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERE 61
K P PKE T P+ P +P P+G P ++ AP +P ++P+P +
Sbjct: 633 KKPAPKELAPTTTKEPTSTTCDKP-APTTPKGTAPTTPKEPAPTTP-----KEPAPTTPK 686
Query: 62 NREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPAT--QSLLA 119
G + TT + P + + LA TT+ + P P T ++
Sbjct: 687 ----------GTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 736
Query: 120 AQLSPAGDTPAPQSHVTHRGPAPS 143
PA TP + T P P+
Sbjct: 737 TPKEPAPTTPKKPAPTTPETPPPT 760
Score = 30.4 bits (67), Expect = 1.7
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVS 67
PKE T+ + +P P+ P P ++ AP +P A P + +
Sbjct: 316 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 375
Query: 68 PITYGCSDTTHRR---TDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSP 124
P T + TT + T P+ A + A T + A +P P T + +P
Sbjct: 376 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK----EPAP 431
Query: 125 AGDTPAPQSHVTHRGPAPS 143
AP T + PAP+
Sbjct: 432 TTTKSAP---TTTKEPAPT 447
Score = 28.1 bits (61), Expect = 8.6
Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 9/119 (7%)
Query: 4 KIPFPKE--GHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERE 61
K P PKE T P+ P +P P+ P ++ AP +P A P
Sbjct: 702 KKPAPKELAPTTTKGPTSTTSDKP-APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPT 760
Query: 62 NREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
E +P T T H+ D + L AE T + N+ +PG T AA
Sbjct: 761 TSEVSTPTTTKEPTTIHKSPDE-----STPELSAEPTPKALENSP-KEPGVPTTKTPAA 813
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/137 (23%), Positives = 47/137 (34%), Gaps = 19/137 (13%)
Query: 26 VSPAHPRGPVPCVGEQGAPPSPGLSAFRKP-----------------SPRERENREAVSP 68
++P P P P E+ AP +P +A P P +E
Sbjct: 607 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 666
Query: 69 ITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLA--AQLSPAG 126
G + TT + P + + LA TT+ + P P T A PA
Sbjct: 667 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 726
Query: 127 DTPAPQSHVTHRGPAPS 143
TP + T +G AP+
Sbjct: 727 TTPKEPAPTTPKGTAPT 743
Score = 35.4 bits (80), Expect = 0.054
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 23/155 (14%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAH-----PRGPVPCVGEQGAPPS---PGLSAFRKPSPRE 59
PKE SP+ +P +P P+ P P ++ AP + P + +KP+P
Sbjct: 508 PKE----PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTT 563
Query: 60 REN------REAVSPITYGCSDTTHRR---TDPESGAGGSRSLLAEMTTQHAANARLPDP 110
+ +E + TT + T PE A + LA T + +P
Sbjct: 564 PKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEP 623
Query: 111 GPATQSLLAAQL--SPAGDTPAPQSHVTHRGPAPS 143
P T A PA TP + T + PAP+
Sbjct: 624 APTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 658
Score = 33.9 bits (76), Expect = 0.16
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 20/144 (13%)
Query: 4 KIPFPKE--GHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERE 61
K P PKE T P+ P +P P+G P ++ AP +P ++P+P +
Sbjct: 685 KKPAPKELAPTTTKEPTSTTCDKP-APTTPKGTAPTTPKEPAPTTP-----KEPAPTTPK 738
Query: 62 NREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPAT--QSLLA 119
G + TT + P + + LA TT+ + P P T ++
Sbjct: 739 ----------GTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 788
Query: 120 AQLSPAGDTPAPQSHVTHRGPAPS 143
PA TP + T P P+
Sbjct: 789 TPKEPAPTTPKKPAPTTPETPPPT 812
Score = 30.4 bits (67), Expect = 1.7
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVS 67
PKE T+ + +P P+ P P ++ AP +P A P + +
Sbjct: 368 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 427
Query: 68 PITYGCSDTTHRR---TDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSP 124
P T + TT + T P+ A + A T + A +P P T + +P
Sbjct: 428 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK----EPAP 483
Query: 125 AGDTPAPQSHVTHRGPAPS 143
AP T + PAP+
Sbjct: 484 TTTKSAP---TTTKEPAPT 499
Score = 28.1 bits (61), Expect = 8.6
Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 9/119 (7%)
Query: 4 KIPFPKE--GHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERE 61
K P PKE T P+ P +P P+ P ++ AP +P A P
Sbjct: 754 KKPAPKELAPTTTKGPTSTTSDKP-APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPT 812
Query: 62 NREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
E +P T T H+ D + L AE T + N+ +PG T AA
Sbjct: 813 TSEVSTPTTTKEPTTIHKSPDE-----STPELSAEPTPKALENSP-KEPGVPTTKTPAA 865
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 36.6 bits (83), Expect = 0.024
Identities = 32/137 (23%), Positives = 47/137 (34%), Gaps = 19/137 (13%)
Query: 26 VSPAHPRGPVPCVGEQGAPPSPGLSAFRKP-----------------SPRERENREAVSP 68
++P P P P E+ AP +P +A P P +E
Sbjct: 648 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPT 707
Query: 69 ITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLA--AQLSPAG 126
G + TT + P + + LA TT+ + P P T A PA
Sbjct: 708 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 767
Query: 127 DTPAPQSHVTHRGPAPS 143
TP + T +G AP+
Sbjct: 768 TTPKEPAPTTPKGTAPT 784
Score = 35.4 bits (80), Expect = 0.054
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 23/155 (14%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAH-----PRGPVPCVGEQGAPPS---PGLSAFRKPSPRE 59
PKE SP+ +P +P P+ P P ++ AP + P + +KP+P
Sbjct: 549 PKE----PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTT 604
Query: 60 REN------REAVSPITYGCSDTTHRR---TDPESGAGGSRSLLAEMTTQHAANARLPDP 110
+ +E + TT + T PE A + LA T + +P
Sbjct: 605 PKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEP 664
Query: 111 GPATQSLLAAQL--SPAGDTPAPQSHVTHRGPAPS 143
P T A PA TP + T + PAP+
Sbjct: 665 APTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 699
Score = 33.9 bits (76), Expect = 0.16
Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 20/144 (13%)
Query: 4 KIPFPKE--GHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERE 61
K P PKE T P+ P +P P+G P ++ AP +P ++P+P +
Sbjct: 726 KKPAPKELAPTTTKEPTSTTCDKP-APTTPKGTAPTTPKEPAPTTP-----KEPAPTTPK 779
Query: 62 NREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPAT--QSLLA 119
G + TT + P + + LA TT+ + P P T ++
Sbjct: 780 ----------GTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 829
Query: 120 AQLSPAGDTPAPQSHVTHRGPAPS 143
PA TP + T P P+
Sbjct: 830 TPKEPAPTTPKKPAPTTPETPPPT 853
Score = 30.4 bits (67), Expect = 1.7
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERENREAVS 67
PKE T+ + +P P+ P P ++ AP +P A P + +
Sbjct: 409 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 468
Query: 68 PITYGCSDTTHRR---TDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSP 124
P T + TT + T P+ A + A T + A +P P T + +P
Sbjct: 469 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPK----EPAP 524
Query: 125 AGDTPAPQSHVTHRGPAPS 143
AP T + PAP+
Sbjct: 525 TTTKSAP---TTTKEPAPT 540
Score = 28.1 bits (61), Expect = 8.6
Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 9/119 (7%)
Query: 4 KIPFPKE--GHTHTSPSCILRGSPVSPAHPRGPVPCVGEQGAPPSPGLSAFRKPSPRERE 61
K P PKE T P+ P +P P+ P ++ AP +P A P
Sbjct: 795 KKPAPKELAPTTTKGPTSTTSDKP-APTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPT 853
Query: 62 NREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAA 120
E +P T T H+ D + L AE T + N+ +PG T AA
Sbjct: 854 TSEVSTPTTTKEPTTIHKSPDE-----STPELSAEPTPKALENSP-KEPGVPTTKTPAA 906
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 36.6 bits (83), Expect = 0.024
Identities = 42/164 (25%), Positives = 59/164 (35%), Gaps = 13/164 (7%)
Query: 13 THTSPSCILRGSPVSPAHPRG--PVPCVGEQGAPPSPGLSAFRKPSPRERENREAVSPIT 70
T T+ + GS +P+ G P+P V A S+ PS P T
Sbjct: 3394 TTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNT 3453
Query: 71 YGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLS------P 124
+ TTH R+ P S R+ T+ + +P T AA S P
Sbjct: 3454 ---TATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTP 3510
Query: 125 AGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPR 168
A +P P S T PSPG +P R + + S+ R
Sbjct: 3511 ALSSPHPSSRTTE--SPPSPGTTTPGHTRGTSRTTATATPSKTR 3552
Score = 36.2 bits (82), Expect = 0.032
Identities = 42/164 (25%), Positives = 58/164 (35%), Gaps = 13/164 (7%)
Query: 13 THTSPSCILRGSPVSPAHPRG--PVPCVGEQGAPPSPGLSAFRKPSPRERENREAVSPIT 70
T T+ + GS +P+ G P+P V A S PS P T
Sbjct: 2137 TTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSNTVTPSSALGTTHTPPVPNT 2196
Query: 71 YGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQL------SP 124
TTH R+ P S R+ T+ + +P T LAA +P
Sbjct: 2197 MA---TTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQHSTP 2253
Query: 125 AGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPR 168
A +P P S T PSPG +P A + + S+ R
Sbjct: 2254 ALSSPHPSSRTTE--SPPSPGTTTPGHTTATSRTTATATPSKTR 2295
Score = 34.3 bits (77), Expect = 0.12
Identities = 41/164 (25%), Positives = 59/164 (35%), Gaps = 13/164 (7%)
Query: 13 THTSPSCILRGSPVSPAHPRG--PVPCVGEQGAPPSPGLSAFRKPSPRERENREAVSPIT 70
T T+ + GS +P+ G P+P V A S+ PS P T
Sbjct: 2694 TTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNT 2753
Query: 71 YGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQL------SP 124
+ TTH R+ S R+ T+ + +P T AA +P
Sbjct: 2754 ---TATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTP 2810
Query: 125 AGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKLAFASRGSEPR 168
A +P P S T PSPG +P RA + + S+ R
Sbjct: 2811 ALSSPHPSSRTTE--SPPSPGTTTPGHTRATSRTTATATPSKTR 2852
Score = 30.8 bits (68), Expect = 1.3
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 28/149 (18%)
Query: 24 SPVSPAHPRGPVPCVGEQGAPPSPGLSAF---RKPSPREREN-REAVSPITYGCSDTTHR 79
+P + + P +G PP P +A R SP R A + T G TTH
Sbjct: 3985 TPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHI 4044
Query: 80 RTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTHRG 139
T+P +G + + TTQH+ +PA +P P S T
Sbjct: 4045 -TEPSTGTSHTPAATTG-TTQHS--------------------TPALSSPHPSSRTTE-- 4080
Query: 140 PAPSPGWWSPRRRRARLKLAFASRGSEPR 168
PSPG +P A + + S+ R
Sbjct: 4081 SPPSPGTTTPGHTTATSRTTATATPSKTR 4109
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 36.6 bits (83), Expect = 0.024
Identities = 36/141 (25%), Positives = 47/141 (33%), Gaps = 25/141 (17%)
Query: 8 PKEGHTHTSPSCILRGSPVSPAHPRGPVP---CVGEQGAPPSPGLSAFRKPSPRERENRE 64
P H H P +LRG + P +P G G L A+ P P
Sbjct: 230 PPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPP------- 282
Query: 65 AVSPITYGCSDTTHRRTDPESGAGGSRSLLAE-MTTQHAANARLPDPGPATQSLLAAQLS 123
H P + A + + A + A P PGP T S+ A
Sbjct: 283 ---------GPAPHPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAG--- 330
Query: 124 PAGDTPAPQSHVTHRGPAPSP 144
AG PAP + + GP P P
Sbjct: 331 -AGSAPAP-APASGSGPGPGP 349
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 36.2 bits (82), Expect = 0.032
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 32/114 (28%)
Query: 25 PVSPAHPRGPVPC---VGEQGAPPSPGLSAFRKPSPRERENREAVSPITYGCSDTTHRRT 81
P P+ R P P G GAPPSPG++ RE SP T + +
Sbjct: 1165 PPPPSGARSPAPTRKEFGGIGAPPSPGVA--------RREMEAPKSPGTTRKDNIGRSQP 1216
Query: 82 DPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSP-AGDTPAPQSH 134
P++G G PGPA S + P AG APQSH
Sbjct: 1217 SPQAGLAG--------------------PGPAGYSTARPTIPPRAGVISAPQSH 1250
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 36.2 bits (82), Expect = 0.032
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 32/114 (28%)
Query: 25 PVSPAHPRGPVPC---VGEQGAPPSPGLSAFRKPSPRERENREAVSPITYGCSDTTHRRT 81
P P+ R P P G GAPPSPG++ RE SP T + +
Sbjct: 1165 PPPPSGARSPAPTRKEFGGIGAPPSPGVA--------RREMEAPKSPGTTRKDNIGRSQP 1216
Query: 82 DPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSP-AGDTPAPQSH 134
P++G G PGPA S + P AG APQSH
Sbjct: 1217 SPQAGLAG--------------------PGPAGYSTARPTIPPRAGVISAPQSH 1250
>gi|39780597 PNMA-like 1 isoform a [Homo sapiens]
Length = 439
Score = 36.2 bits (82), Expect = 0.032
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 26/116 (22%)
Query: 39 GEQGAPPSPGLSAF---RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLA 95
G +PP A+ + P+P ++ + ++ P++Y D+ R P
Sbjct: 339 GGHESPPKKKAVAWVSAKNPAPMRKKKKVSLGPVSYVLVDSEDGRKKPV----------- 387
Query: 96 EMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTHRGPAPSPGWWSPRR 151
+P GP ++ + Q +P G PA + T RGP P SPRR
Sbjct: 388 -----------MPKKGPGSRREASDQKAPRGQQPAEATASTSRGPKAKPE-GSPRR 431
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 36.2 bits (82), Expect = 0.032
Identities = 36/128 (28%), Positives = 46/128 (35%), Gaps = 19/128 (14%)
Query: 22 RGSPVSPAHPRGPVPCVG--EQGAPPSPGLSAFRKPS--PRERENREAVSPITYGCSDTT 77
+G P P P GP P G QG PP PG KP P + N+ P G
Sbjct: 111 QGPPPRPGKPEGPPPQGGNQSQGPPPRPG-----KPEGPPPQGGNQSQGPPPRPG----- 160
Query: 78 HRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTH 137
+ + GG++S + H P P QS + P PQ
Sbjct: 161 --KPEGPPPQGGNQS---QGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQS 215
Query: 138 RGPAPSPG 145
+GP P PG
Sbjct: 216 QGPPPRPG 223
Score = 33.1 bits (74), Expect = 0.27
Identities = 35/128 (27%), Positives = 45/128 (35%), Gaps = 19/128 (14%)
Query: 22 RGSPVSPAHPRGPVPCVG--EQGAPPSPGLSAFRKP--SPRERENREAVSPITYGCSDTT 77
+G P P P GP P G QG PP PG KP P + N+ P G
Sbjct: 69 QGPPPRPGKPEGPPPQGGNQSQGPPPRPG-----KPEGQPPQGGNQSQGPPPRPG----- 118
Query: 78 HRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTH 137
+ + GG++S + P P QS + P PQ
Sbjct: 119 --KPEGPPPQGGNQS---QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQS 173
Query: 138 RGPAPSPG 145
+GP P PG
Sbjct: 174 QGPPPHPG 181
Score = 30.8 bits (68), Expect = 1.3
Identities = 34/125 (27%), Positives = 40/125 (32%), Gaps = 35/125 (28%)
Query: 22 RGSPVSPAHPRGPVPCVGE--QGAPPSPGLSAFRKPSPRERENREAVSPITYGCSDTTHR 79
+G P P P GP G QG PP PG + P P+E + P R
Sbjct: 216 QGPPPRPGKPEGPPSQGGNKPQGPPPHPGKP--QGPPPQEGNKPQRPPP--------PGR 265
Query: 80 RTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTHRG 139
P G N + P P PA + P G P PQ HR
Sbjct: 266 PQGPPPPGG---------------NPQQPLPPPAGK--------PQGPPPPPQGGRPHRP 302
Query: 140 PAPSP 144
P P
Sbjct: 303 PQGQP 307
Score = 28.9 bits (63), Expect = 5.1
Identities = 33/126 (26%), Positives = 44/126 (34%), Gaps = 19/126 (15%)
Query: 24 SPVSPAHPRGPVPCVG--EQGAPPSPGLSAFRKPS--PRERENREAVSPITYGCSDTTHR 79
+P P P G P G QG PP PG KP P + N+ P G
Sbjct: 50 TPPPPGKPEGRPPQGGNQSQGPPPRPG-----KPEGPPPQGGNQSQGPPPRPG------- 97
Query: 80 RTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSLLAAQLSPAGDTPAPQSHVTHRG 139
+ + + GG++S + P P QS + P PQ +G
Sbjct: 98 KPEGQPPQGGNQS---QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 154
Query: 140 PAPSPG 145
P P PG
Sbjct: 155 PPPRPG 160
>gi|4507831 Unc-51-like kinase 1 [Homo sapiens]
Length = 1050
Score = 35.4 bits (80), Expect = 0.054
Identities = 48/161 (29%), Positives = 54/161 (33%), Gaps = 37/161 (22%)
Query: 15 TSPSCILRGSPVSPAH-----------------PRGPVPCVGEQGAPPSPGLSAFRKPSP 57
TSP R SP PAH P P P VG P PG S PSP
Sbjct: 468 TSPLGFARASPSPPAHAEHGGVLARKMSLGGGRPYTPSPQVGT--IPERPGWSG--TPSP 523
Query: 58 RERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGPATQSL 117
+ E R SP + RT SG G ++ H +LP P
Sbjct: 524 QGAEMRGGRSPRPGSSAPEHSPRT---SGLGCRLHSAPNLSDLHVVRPKLPKP---PTDP 577
Query: 118 LAAQLSPAGDTPAPQSHVTHRGPAPSPGWWSPRRRRARLKL 158
L A SP +P P PS G S R R KL
Sbjct: 578 LGAVFSPPQASP----------PQPSHGLQSCRNLRGSPKL 608
>gi|239740757 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 35.4 bits (80), Expect = 0.054
Identities = 33/111 (29%), Positives = 41/111 (36%), Gaps = 21/111 (18%)
Query: 53 RKPSPRERENREAVSPITYGCSDTTHRRTDPESGAGGSRSLLAEMTTQHAANARLPDPGP 112
R P PR R R + P + P S A +RS A T P
Sbjct: 39 RAPQPRRRRRRLGLQP--FALPPPPRLSLGPGSWAKFARSATAAQTA-----------AP 85
Query: 113 ATQSLLAAQLSP------AGDTPAPQS--HVTHRGPAPSPGWWSPRRRRAR 155
AT + +A L P + TPAP + VTH G W+PR R R
Sbjct: 86 ATAAAMARALGPYVTSACSSATPAPPAGGDVTHHSRRGWDGTWTPRFSRPR 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,842,099
Number of Sequences: 37866
Number of extensions: 942284
Number of successful extensions: 5734
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 5006
Number of HSP's gapped (non-prelim): 974
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.