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Search of human proteins with 239750452
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750452 PREDICTED: hypothetical protein [Homo sapiens]
(524 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755949 PREDICTED: hypothetical protein [Homo sapiens] 1082 0.0
gi|239750452 PREDICTED: hypothetical protein [Homo sapiens] 1082 0.0
gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo ... 1069 0.0
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 50 7e-06
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 41 0.002
gi|86991440 splicing factor, arginine/serine-rich 5 [Homo sapiens] 41 0.003
gi|86991438 splicing factor, arginine/serine-rich 5 [Homo sapiens] 41 0.003
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.005
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens] 39 0.012
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 39 0.015
gi|239757778 PREDICTED: hypothetical protein [Homo sapiens] 37 0.044
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 37 0.044
gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens] 37 0.058
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 37 0.058
gi|50962882 G patch domain containing 8 [Homo sapiens] 36 0.075
gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens] 36 0.098
gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo sapi... 36 0.098
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 35 0.13
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 35 0.13
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 35 0.13
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 35 0.13
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 35 0.13
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 35 0.13
gi|239755335 PREDICTED: hypothetical protein [Homo sapiens] 35 0.22
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 34 0.29
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 34 0.29
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 34 0.29
gi|50083281 KIAA1853 protein [Homo sapiens] 34 0.29
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 34 0.37
gi|6754638 microtubule-associated protein tau isoform 2 [Homo sa... 34 0.37
>gi|239755949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 524
Score = 1082 bits (2797), Expect = 0.0
Identities = 524/524 (100%), Positives = 524/524 (100%)
Query: 1 MGDSPMGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGD 60
MGDSPMGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGD
Sbjct: 1 MGDSPMGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGD 60
Query: 61 DLSPGLVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHP 120
DLSPGLVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHP
Sbjct: 61 DLSPGLVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHP 120
Query: 121 YPGDGQSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIK 180
YPGDGQSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIK
Sbjct: 121 YPGDGQSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIK 180
Query: 181 SKSKNHFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVG 240
SKSKNHFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVG
Sbjct: 181 SKSKNHFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVG 240
Query: 241 HQGQWVSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPT 300
HQGQWVSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPT
Sbjct: 241 HQGQWVSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPT 300
Query: 301 SLHGAPLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQF 360
SLHGAPLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQF
Sbjct: 301 SLHGAPLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQF 360
Query: 361 SQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL 420
SQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL
Sbjct: 361 SQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL 420
Query: 421 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATAR 480
HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATAR
Sbjct: 421 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATAR 480
Query: 481 TPVMGPSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 524
TPVMGPSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP
Sbjct: 481 TPVMGPSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 524
>gi|239750452 PREDICTED: hypothetical protein [Homo sapiens]
Length = 524
Score = 1082 bits (2797), Expect = 0.0
Identities = 524/524 (100%), Positives = 524/524 (100%)
Query: 1 MGDSPMGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGD 60
MGDSPMGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGD
Sbjct: 1 MGDSPMGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGD 60
Query: 61 DLSPGLVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHP 120
DLSPGLVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHP
Sbjct: 61 DLSPGLVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHP 120
Query: 121 YPGDGQSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIK 180
YPGDGQSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIK
Sbjct: 121 YPGDGQSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIK 180
Query: 181 SKSKNHFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVG 240
SKSKNHFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVG
Sbjct: 181 SKSKNHFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVG 240
Query: 241 HQGQWVSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPT 300
HQGQWVSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPT
Sbjct: 241 HQGQWVSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPT 300
Query: 301 SLHGAPLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQF 360
SLHGAPLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQF
Sbjct: 301 SLHGAPLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQF 360
Query: 361 SQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL 420
SQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL
Sbjct: 361 SQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL 420
Query: 421 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATAR 480
HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATAR
Sbjct: 421 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATAR 480
Query: 481 TPVMGPSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 524
TPVMGPSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP
Sbjct: 481 TPVMGPSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 524
>gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo
sapiens]
Length = 519
Score = 1069 bits (2764), Expect = 0.0
Identities = 518/519 (99%), Positives = 518/519 (99%)
Query: 6 MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG 65
MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG
Sbjct: 1 MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG 60
Query: 66 LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG 125
LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG
Sbjct: 61 LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG 120
Query: 126 QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN 185
QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN
Sbjct: 121 QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN 180
Query: 186 HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW 245
HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW
Sbjct: 181 HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW 240
Query: 246 VSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 305
VSLQHQESQV EGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA
Sbjct: 241 VSLQHQESQVPEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 300
Query: 306 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV 365
PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV
Sbjct: 301 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV 360
Query: 366 FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR 425
FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR
Sbjct: 361 FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR 420
Query: 426 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG 485
TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG
Sbjct: 421 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG 480
Query: 486 PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 524
PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP
Sbjct: 481 PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 519
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 49.7 bits (117), Expect = 7e-06
Identities = 83/361 (22%), Positives = 127/361 (35%), Gaps = 28/361 (7%)
Query: 136 LASSSAEALGICK---MVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSK-NHFYVGG 191
L+ AE + + K + G E SS D ++ SR S+ +S K N G
Sbjct: 435 LSPGQAERVSVGKAGTVSPGKEDPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVSSGP 494
Query: 192 GD-RFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQWVSLQH 250
GD R L +A++AEP G GD + + G G+AA
Sbjct: 495 GDPRSLGTAGPPSAVKAEPAT-----GGKGDPLSSEKAGLVASGKAAPTASGKAEPLAVG 549
Query: 251 QESQVSEG-----PQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 305
+E VS+G P ++ + +VV + V G +++G E P +
Sbjct: 550 KEDPVSKGKADAGPSGQGDSVSIGKVVSTPGKTVPVPSGKVDPVSLGKAEAIPEGKVGSL 609
Query: 306 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEG----VCDRQRVPDGQFS 361
PL P+ T SG P G E G VC ++ P
Sbjct: 610 PLEKGSPVTTTKADPRASGKAQPQSGGKAETKLPGQEGAAAPGEAGAVCLKKETPQASEK 669
Query: 362 QETVFCIRVVQQSPG-----GVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKA 416
+ C + + G + AD A S + LS +K PSS S +
Sbjct: 670 VDPGSCRKAEPLASGKGEPVSLGKADSAPSRKTESPSLGKVVPLSLEKTKPSSSSRQLDR 729
Query: 417 RLILHCRHRTGTRADTASASARARPRSRSRSRA---AESQARPQTRTRTRTRTTPPWPGP 473
+ + R G R +A P S + + + + +A R+ PP PGP
Sbjct: 730 KALGSARSPEGARGSEGRVEPKAEPVSSTEASSLGQKDLEAAGAERSPCPEAAAPP-PGP 788
Query: 474 R 474
R
Sbjct: 789 R 789
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 41.2 bits (95), Expect = 0.002
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 10/188 (5%)
Query: 133 SLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKNHFYVGGG 192
+L A++SA A G GP++ SS P ++ + S+ P+T S+ + +H G G
Sbjct: 120 TLAAAATSAPAPGA---PGGPQLAGSSAGPVTA-APSQPPTTCSSRFRVIKLDH---GSG 172
Query: 193 DRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQWVSLQHQE 252
+ + T + +L R GD ++H+ + +G G V +
Sbjct: 173 EPYRRGRWTCMEYYERDSDSSVLT-RSGDCIRHSSTFDQTAERDSGLGATGGSVVVVVAS 231
Query: 253 SQVSEGPQAG-DHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGAPLFLAK 311
Q + GP++G D +L + + + P + +VG + PPP + GA +
Sbjct: 232 MQGAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPQSFSVGQPQ-PPPPPVGGAVAQSSA 290
Query: 312 PLIPTPPA 319
PL P P A
Sbjct: 291 PLPPFPGA 298
>gi|86991440 splicing factor, arginine/serine-rich 5 [Homo sapiens]
Length = 272
Score = 40.8 bits (94), Expect = 0.003
Identities = 21/46 (45%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 421 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 466
H R R+ +R+ T S+S R+R RSRSRSR + S++R ++R+R+R+++
Sbjct: 183 HSRSRSRSRSRTRSSS-RSRSRSRSRSRKSYSRSRSRSRSRSRSKS 227
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 392 LSGAHHILLSGDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRA 449
++G L+ G K S S R ++R R R+ +R+ + + +R+R RSRSRSR+
Sbjct: 169 INGRKIKLIEGSKRHSRSRS-RSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS 225
Score = 29.3 bits (64), Expect = 9.2
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Query: 429 RADTASASARARPRS------RSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTP 482
R + + +R+R RS RSRSR+ +S +R ++R+R+R+R+ + + +R+P
Sbjct: 182 RHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS-------KSRSVSRSP 234
Query: 483 VMGPSLHTG 491
V S G
Sbjct: 235 VPEKSQKRG 243
>gi|86991438 splicing factor, arginine/serine-rich 5 [Homo sapiens]
Length = 272
Score = 40.8 bits (94), Expect = 0.003
Identities = 21/46 (45%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 421 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 466
H R R+ +R+ T S+S R+R RSRSRSR + S++R ++R+R+R+++
Sbjct: 183 HSRSRSRSRSRTRSSS-RSRSRSRSRSRKSYSRSRSRSRSRSRSKS 227
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 392 LSGAHHILLSGDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRA 449
++G L+ G K S S R ++R R R+ +R+ + + +R+R RSRSRSR+
Sbjct: 169 INGRKIKLIEGSKRHSRSRS-RSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS 225
Score = 29.3 bits (64), Expect = 9.2
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Query: 429 RADTASASARARPRS------RSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTP 482
R + + +R+R RS RSRSR+ +S +R ++R+R+R+R+ + + +R+P
Sbjct: 182 RHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS-------KSRSVSRSP 234
Query: 483 VMGPSLHTG 491
V S G
Sbjct: 235 VPEKSQKRG 243
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.0 bits (92), Expect = 0.005
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 401 SGDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRT 460
SG S R ++R + R R G+ + S + + R+ SR R S+ P +R
Sbjct: 1791 SGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRK 1850
Query: 461 RTRTRTTP-PWPGPRCPATART 481
R+R+RT+P PW R A+ T
Sbjct: 1851 RSRSRTSPAPWKRSRSRASPAT 1872
Score = 35.8 bits (81), Expect = 0.098
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 402 GDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTR 461
G P P + R R+ R + S S R RSRSR+ A ++R +T R
Sbjct: 532 GRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPAR 591
Query: 462 TRTRTTPPWPGPRCPATARTP 482
R+R+ P R + +RTP
Sbjct: 592 RRSRSRTP---TRRRSRSRTP 609
Score = 33.1 bits (74), Expect = 0.64
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 409 SPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTP 468
+P+ R ++R R R+ +R T R RSRSR+ A ++R +T R R+RT
Sbjct: 577 TPARRGRSRSRTPARRRSRSRTPT-------RRRSRSRTPARRGRSRSRTPARRRSRTRS 629
Query: 469 P 469
P
Sbjct: 630 P 630
Score = 33.1 bits (74), Expect = 0.64
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 408 SSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTT 467
SSP + K R L R R+G+ + S S + RSRS S + E + +P+ R ++ +
Sbjct: 1561 SSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGS-SPEVKDKPRAAPRAQSGSD 1619
Query: 468 PPWPGPRCPATARTP 482
P P+ PA P
Sbjct: 1620 SS-PEPKAPAPRALP 1633
Score = 32.3 bits (72), Expect = 1.1
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 408 SSPSLRKKARLILHCRH---------RTGTRADTASASARARPRSRSRS-RAAESQARPQ 457
SSP L +KARL R RT R + + + P +SRS R S + P+
Sbjct: 1693 SSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPR 1752
Query: 458 TRTRTRTRTTPPWPGPR 474
T+T +R R P P PR
Sbjct: 1753 TKTTSR-RGRSPSPKPR 1768
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 407 PSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRT------ 460
P+ R ++ + R R+ R S S R RSRSR + R ++RT
Sbjct: 620 PARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSG 679
Query: 461 RTRTRTTPPWPGPRCPATARTPVMGPS 487
R+R+RT P R + +RTP G S
Sbjct: 680 RSRSRT----PARRGRSRSRTPRRGRS 702
Score = 31.6 bits (70), Expect = 1.9
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 408 SSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRS----RAAESQARPQTRTRTR 463
+SP R+++R R R + AS +R RSRSR+ R P TR R+R
Sbjct: 1892 TSPVSRRRSR----SRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1947
Query: 464 TRTTPPWPGPRCPATARTP 482
+RT P R + +RTP
Sbjct: 1948 SRTPPV---TRRRSRSRTP 1963
Score = 31.6 bits (70), Expect = 1.9
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 413 RKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTP 468
R +A + R R+ T T S P +R RSR S+ P TR R+R+RT P
Sbjct: 1912 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR---SRTPPVTRRRSRSRTPP 1964
Score = 31.6 bits (70), Expect = 1.9
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 17/88 (19%)
Query: 409 SPSLRKKARL----ILHCRHRTGT-----RADTASASARARPRSRSRS-----RAAESQA 454
+P+ R+++R + R R+ T R + S R RSRSR+ R + S+
Sbjct: 1939 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRT 1998
Query: 455 RPQTRTRTRTRTTPPWPGPRCPATARTP 482
P TR R+R+RT+P R + +RTP
Sbjct: 1999 SPVTRRRSRSRTSPV---TRRRSRSRTP 2023
Score = 31.6 bits (70), Expect = 1.9
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 410 PSLRKKARLILHCRHRTGTRADTASASARARPRSRSRS-----RAAESQARPQTRTRTRT 464
P R+++R R +R+ T+ + R RSRSR+ R + S+ P TR R+R+
Sbjct: 1964 PVTRRRSRSRTSPITRRRSRSRTSPVTRR---RSRSRTSPVTRRRSRSRTSPVTRRRSRS 2020
Query: 465 RTTPPWPGPRCPATARTPVM 484
RT P R + +RTP++
Sbjct: 2021 RTP---PAIRRRSRSRTPLL 2037
Score = 30.8 bits (68), Expect = 3.2
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 413 RKKARLILHCRHRTGTRADTASAS-ARARPRSRSRSRA--------AESQARPQTRTRTR 463
R +A H R R+ T + S +R P SR RSR+ + S+A P +R R+R
Sbjct: 1865 RSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSR 1924
Query: 464 TRTTPPWPGPRCPATARTP 482
+RT P R + +RTP
Sbjct: 1925 SRTPPV---TRRRSRSRTP 1940
Score = 30.4 bits (67), Expect = 4.1
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 423 RHRTGTRADTASASARARPRSRSRSRAAESQAR---PQTRTRTRTRTTPPWPGPR 474
R R+ +R T +R+R RSR+A+ R PQ R R+R+ P W R
Sbjct: 492 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSR 546
Score = 30.0 bits (66), Expect = 5.4
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 408 SSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTT 467
SSP + K+R R R+ + + AR RSRS S + E+++R R R +
Sbjct: 1674 SSPEPKTKSRT--PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVS 1731
Query: 468 PPWPGPRCPATAR 480
P P + ++ R
Sbjct: 1732 SPEPAEKSRSSRR 1744
Score = 29.6 bits (65), Expect = 7.0
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 394 GAHHILLSGDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQ 453
G+H + S S K+ + H R R+ + + + R R RSR+ ++ S+
Sbjct: 448 GSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSR 507
Query: 454 AR-PQTRTRTRTRTTPPWPGPRCP 476
+R PQ R R+R+ W R P
Sbjct: 508 SRSPQWR---RSRSAQRWGRSRSP 528
Score = 29.6 bits (65), Expect = 7.0
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 408 SSPSLRKKARLILHCRHRTGTRA----------DTASASARARPRSRSRSRAAESQARPQ 457
SSP + A L R R+G+ + + +S P+SR+ R + S P+
Sbjct: 1620 SSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK 1679
Query: 458 TRTRTRTRTTPPWPGPRCPATAR 480
T++RT R P AR
Sbjct: 1680 TKSRTPPRRRSSRSSPELTRKAR 1702
Score = 29.6 bits (65), Expect = 7.0
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 401 SGDKLPPSSPSLRKKARLILHCRHRTGT----RADTASASARARPRSRSRSRAAESQARP 456
S + PP S + R+ +R + ++ T R+ +S + R RSR+A S
Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPET 1716
Query: 457 QTRTRTRTRTTPPWPGPRCPATART 481
++RT R R +P P +R+
Sbjct: 1717 RSRTPPRHRRSPSVSSPEPAEKSRS 1741
>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
Length = 221
Score = 38.9 bits (89), Expect = 0.012
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 13/74 (17%)
Query: 409 SPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRS-------------RAAESQAR 455
SP R+++R R R+ +R+ + + +R+R RSRSRS ++ S++R
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 456 PQTRTRTRTRTTPP 469
++R+R+R+R+ PP
Sbjct: 181 SRSRSRSRSRSPPP 194
Score = 37.0 bits (84), Expect = 0.044
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 423 RHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRT 464
R R+ R + + +R+R RSRSRSR + S++R +TR+R+R+
Sbjct: 118 RSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS 159
Score = 34.7 bits (78), Expect = 0.22
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 413 RKKARLILHCRHRTGTRADTASAS---ARARPRSRSRSRAAESQARPQTRTRTRTRTTPP 469
R ++R + R+ R+ + S+S +R+R RSRSRSR+ ++ ++++R+R+++ P
Sbjct: 152 RTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPK 211
Query: 470 WP 471
P
Sbjct: 212 SP 213
Score = 34.3 bits (77), Expect = 0.29
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 428 TRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 466
+R+ +R+R RSRSRSR+ +R ++R+RTR+R+
Sbjct: 119 SRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRS 157
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 38.5 bits (88), Expect = 0.015
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 37/224 (16%)
Query: 297 PPPTSLHGAPLFLAKP-----------LIPTPPALEISGGLYPPGTDLL--VYYPQGPEV 343
PPP +G P + + L+P P ++ GL P L Y P P+
Sbjct: 614 PPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPK- 672
Query: 344 GVEEGVCDRQRVPDGQFSQETVFCIRVVQQSPGGVAAADQA---QQGLHRLLSGAHHILL 400
D + P S+ + + P + Q GL+
Sbjct: 673 -------DIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARR 725
Query: 401 -SGDKLPPSSPSL-RKKARLILHCRHRTGTRADTASAS---------ARARPRSRSRSRA 449
G + S PS R +++ R+ +R+ +S S +R+ RSRSRSR+
Sbjct: 726 RKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRS 785
Query: 450 AESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMGPSLHTGVG 493
+R ++R+++R+R+ PG R + +R+P P G+G
Sbjct: 786 RSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPT--PPSSAGLG 827
>gi|239757778 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 37.0 bits (84), Expect = 0.044
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 423 RHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTP 482
R TGT T + A A P +R R+R P++RTRT TTPP CP A
Sbjct: 30 RTSTGTGTSTRTIPAPA-PSARRRARPKPGAQLPRSRTRTPAWTTPP---TACPNGASVL 85
Query: 483 VMGPS 487
GPS
Sbjct: 86 SGGPS 90
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 37.0 bits (84), Expect = 0.044
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 423 RHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGP---RCPATA 479
RH + +R+ ++ + + +R RS +RSR+ S + Q+R+R+R+R+ P P P + A
Sbjct: 487 RHHSSSRSRSSWSLSPSRSRSLTRSRS-HSPSPSQSRSRSRSRSQSPSPSPAREKLTRPA 545
Query: 480 RTPVMGPSL 488
+P +G L
Sbjct: 546 ASPAVGEKL 554
>gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]
Length = 288
Score = 36.6 bits (83), Expect = 0.058
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 421 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 466
H R+ ++ D+ + +++R RS SRSR+ S R TR+R+R+R+
Sbjct: 32 HTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 36.6 bits (83), Expect = 0.058
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 29/149 (19%)
Query: 362 QETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL- 420
+ TV C+ VV+ P + D Q HR++ + SS RKKA+
Sbjct: 956 ERTVTCVTVVE--PEAPPSPDVLQAATHRVVE----LRPPSRSRSTSSSRSRKKAKRKRV 1009
Query: 421 ---HCRHRTGTRADTASASARA--------RPR-----------SRSRSRAAESQARPQT 458
H R R+GTR+++ S+R+ RPR S RS + E R +
Sbjct: 1010 SREHGRTRSGTRSESRDRSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKA 1069
Query: 459 RTRTRTRTTPPWPGPRCPATARTPVMGPS 487
+ ++R PW R + +R+ G S
Sbjct: 1070 KDKSREHRRGPWGHSRRTSRSRSGSPGSS 1098
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 421 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATAR 480
H R R+ R D + A R R + RSR+ S+ R + R R+R WP R + R
Sbjct: 1136 HQRERSHERPDRKESVAWPRDRRKRRSRSPSSEHRAREHRRPRSR--EKWPQTRSHSPER 1193
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 36.2 bits (82), Expect = 0.075
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 381 ADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHRTGTRADTASAS-ARA 439
+D + + S H S D S R ++R H R R+ +R + S+S +R+
Sbjct: 911 SDDSDYASSKHRSKRHKYSSSDDDYSLSCSQSRSRSRS--HTRERSRSRGRSRSSSCSRS 968
Query: 440 RPRSRSRSRAAESQARPQTRTRTRTRTT 467
R + RSRS A S R ++ +R R+R+T
Sbjct: 969 RSKRRSRSTTAHSWQRSRSYSRDRSRST 996
>gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens]
Length = 771
Score = 35.8 bits (81), Expect = 0.098
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 379 AAADQAQQGLHRLLSGA---HHILLSGDKLPPSSPSLRKKARLILHCRHRTG-TRADTAS 434
AAA + H +S A H+ ++G P+ R + L L H + D A
Sbjct: 599 AAAPATEGRAHPAVSRACSTPHVQVAGKA---ERPTARSEQYLTLSGAHDLSESELDVAG 655
Query: 435 ASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMGP 486
+RA P+ + RP R R PP+PGP PA A + GP
Sbjct: 656 LQSRATPQCQ----------RPHGSGRDDKRPPPPYPGPGKPAAAAAWIQGP 697
>gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo
sapiens]
Length = 974
Score = 35.8 bits (81), Expect = 0.098
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 379 AAADQAQQGLHRLLSGA---HHILLSGDKLPPSSPSLRKKARLILHCRHRTG-TRADTAS 434
AAA + H +S A H+ ++G P+ R + L L H + D A
Sbjct: 802 AAAPATEGRAHPAVSRACSTPHVQVAGKA---ERPTARSEQYLTLSGAHDLSESELDVAG 858
Query: 435 ASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMGP 486
+RA P+ + RP R R PP+PGP PA A + GP
Sbjct: 859 LQSRATPQCQ----------RPHGSGRDDKRPPPPYPGPGKPAAAAAWIQGP 900
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 35.4 bits (80), Expect = 0.13
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 368 IRVVQQSPGGVAAADQAQQGLH-RLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHRT 426
IR+V+ PG ++ H R S + H S + SS S K+R R R+
Sbjct: 170 IRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSR-SGSSKSSHSKSR----SRSRS 224
Query: 427 GTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 466
G+R+ +++R RS+SRSR+ + ++R ++ ++R+R+
Sbjct: 225 GSRS-----RSKSRSRSQSRSRSKKEKSRSPSKEKSRSRS 259
Score = 31.2 bits (69), Expect = 2.4
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 407 PSSPSLRKKARLILHCRHRTGTRADTAS-----ASARARPRSRSRSRAAESQARPQTRTR 461
P S R +R H R R+ +R S +S + +SRSRSR+ S++R ++R+R
Sbjct: 177 PGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSG-SRSRSKSRSR 235
Query: 462 TRTRTTPPWPGPRCPATART 481
+++R+ R P+ ++
Sbjct: 236 SQSRSRSKKEKSRSPSKEKS 255
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 35.4 bits (80), Expect = 0.13
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 69 SAEEDSPWGGRDEDGGAVTQGLWPGTRDRTV---RGHPR-RPRASKPTNSMRHFHPYPGD 124
S S DED TQ L PG R V HPR P+AS S D
Sbjct: 992 STARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKESSRISD 1051
Query: 125 GQSR-----------GSIRSLNLASSSAEALGICKMVEG--PEMTDSSDSPDSSTSDSRD 171
G+ + G++ + + S+S +A G K+ + PE+ ++ +P+SS DS D
Sbjct: 1052 GKKQEGPATQVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESS-DDSED 1110
Query: 172 PSTSST 177
S SS+
Sbjct: 1111 SSDSSS 1116
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
sapiens]
Length = 1450
Score = 35.4 bits (80), Expect = 0.13
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 69 SAEEDSPWGGRDEDGGAVTQGLWPGTRDRTV---RGHPR-RPRASKPTNSMRHFHPYPGD 124
S S DED TQ L PG R V HPR P+AS S D
Sbjct: 992 STARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKESSRISD 1051
Query: 125 GQSR-----------GSIRSLNLASSSAEALGICKMVEG--PEMTDSSDSPDSSTSDSRD 171
G+ + G++ + + S+S +A G K+ + PE+ ++ +P+SS DS D
Sbjct: 1052 GKKQEGPATQVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESS-DDSED 1110
Query: 172 PSTSST 177
S SS+
Sbjct: 1111 SSDSSS 1116
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 35.4 bits (80), Expect = 0.13
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 402 GDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTR 461
G+K SLR +++ H+ +R T+ + +RAR RS S+S++ SQ R ++R+R
Sbjct: 1812 GEKEKKRDSSLRSRSKRSKSSEHK--SRKRTSESRSRARKRS-SKSKSHRSQTRSRSRSR 1868
Query: 462 TRTRTT 467
R R++
Sbjct: 1869 RRRRSS 1874
Score = 30.8 bits (68), Expect = 3.2
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 424 HRTGTRADTASASARARPRSRSRSRAAES----------QARPQTRTRTRTRTTPPWPGP 473
HR+ TR+ + S R RSRS+SR S + R ++R R R R++
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Query: 474 RCPATARTPVMGPSLHT 490
A +RTP HT
Sbjct: 1917 TVRARSRTPSRRSRSHT 1933
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 35.4 bits (80), Expect = 0.13
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 402 GDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTR 461
G+K SLR +++ H+ +R T+ + +RAR RS S+S++ SQ R ++R+R
Sbjct: 1812 GEKEKKRDSSLRSRSKRSKSSEHK--SRKRTSESRSRARKRS-SKSKSHRSQTRSRSRSR 1868
Query: 462 TRTRTT 467
R R++
Sbjct: 1869 RRRRSS 1874
Score = 30.8 bits (68), Expect = 3.2
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 424 HRTGTRADTASASARARPRSRSRSRAAES----------QARPQTRTRTRTRTTPPWPGP 473
HR+ TR+ + S R RSRS+SR S + R ++R R R R++
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Query: 474 RCPATARTPVMGPSLHT 490
A +RTP HT
Sbjct: 1917 TVRARSRTPSRRSRSHT 1933
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 35.4 bits (80), Expect = 0.13
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 296 TPPPTSLHGAPLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDR-QR 354
TPPPT LH P +P P PP PP T +V P P + + + +R +
Sbjct: 921 TPPPT-LHLVP----EPAAPPPP---------PPRTFQMVTTPF-PALPQPKALLERFHQ 965
Query: 355 VPDGQFSQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPS 411
VP G ++Q GG AA Q L L S A +L+SG + P +P+
Sbjct: 966 VPSGI----------ILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSG-QAPSGTPT 1011
>gi|239755335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 515
Score = 34.7 bits (78), Expect = 0.22
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 152 GPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKNHFYVGGGDRFLLVGCTLTAIEAEPPE 211
G + T + + SS+S + P+TSST+ ++ +HF G GD+ L G L ++ A+ PE
Sbjct: 172 GSQGTQEAPTNLSSSSQAPSPATSSTHPQTPVPSHFQ-GLGDQSLSPG-NLGSL-AKKPE 228
Query: 212 EMLLIGRHGDVVQ---HAELG-QAVDGEAAVVGHQGQWVSLQHQESQVSEGPQAGDHALQ 267
+ G H + + AE G + + V G + H V G H
Sbjct: 229 GLAERGAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQD 288
Query: 268 VCQVVE-AQVQGDEVGPGSTAT----LTVGVTETPPPTSLHGAPLFLAKP 312
CQ + A+ G ++GP ++ + +P P++L G P L +P
Sbjct: 289 QCQGGKVAEPHGRDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQP 338
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 34.3 bits (77), Expect = 0.29
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 428 TRADTASASARARPRSRSRSRAAESQARPQTRTRTRTR 465
+R+ + + +R+RPR RS SR++E + +TR+R+R R
Sbjct: 99 SRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDR 136
Score = 30.8 bits (68), Expect = 3.2
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 423 RHRTGTRADTASASARARPRSRSRSRAAESQ-ARPQTRTRTRTRTTP 468
RHR+ + + S R+R RSR R ++ Q +R ++RTR R+R+ P
Sbjct: 67 RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRP 112
Score = 30.0 bits (66), Expect = 5.4
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 405 LPPSSPSLRKKARLILHCRHRTGTRADTASASARAR------PRSRSRSRAAESQARPQT 458
L P S S ++ R G+R + + +R R RSRS+SR S++RP+
Sbjct: 55 LQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL 114
Query: 459 RTRTRT 464
R+ +R+
Sbjct: 115 RSHSRS 120
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 34.3 bits (77), Expect = 0.29
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 426 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCP 476
T T T + + R R+ +R + R TRT T T TP P P CP
Sbjct: 1463 TTTPRPTTATTRRTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTPIPTCP 1513
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 34.3 bits (77), Expect = 0.29
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 393 SGAHHILLSGDKLPPSSPSLRKKARLILHCRHRT-GTRADTASASARARPRSRSRSRAAE 451
SG HH L S + LP SP+ CR ADT ++ A P S S + A
Sbjct: 1094 SGLHHSLSSSESLP-GSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAA 1152
Query: 452 S----------------QARPQTRTRTRTRTTPPWPGPRCPATARTPVMGPS 487
+ RP+T R T + PP P CP + P PS
Sbjct: 1153 AGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPPSP-LACPPISAPPPRSPS 1203
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 34.3 bits (77), Expect = 0.29
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 433 ASASARARPRSRSRSRA-AESQARPQTRTRTRTRTTPPWPGPRCPATART 481
+S+S+R+ RS SRSR+ + S+ R +TRT + + + P PG R + +R+
Sbjct: 538 SSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRS 587
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 406 PPSSPSLRKKARLILHCRHRTGTRADTASAS-ARARPRSRSRSRAAESQARPQTRTRTRT 464
P SS SL + R+ +R+ + S S +R+R RSR+R+ ++ S P +R+R+
Sbjct: 524 PSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRS 583
Query: 465 RT 466
R+
Sbjct: 584 RS 585
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 413 RKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRT 460
R ++R R RT + + + S S +R RSRSRSR + S++R Q+R+
Sbjct: 553 RSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRSR-SRSRSRSQSRS 599
Score = 30.4 bits (67), Expect = 4.1
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Query: 423 RHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 466
R R+ TR ++S+S P SRSRSR+ ++R+R+R+R+
Sbjct: 559 RRRSRTRTSSSSSSRSPSPGSRSRSRS-------RSRSRSRSRS 595
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 33.9 bits (76), Expect = 0.37
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 401 SGDKLPPSSPSLRKKARLILHCRHRTGTRADTAS-------ASARARPRSRSRSRA-AES 452
S + P SS ++ ++I+ R ++ + + +S AS R+RP+S S+SR+ S
Sbjct: 231 SDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRS 290
Query: 453 QARPQTRTRTRTRTTPPWPGPRCPATART 481
++ Q RT +R R + W A +RT
Sbjct: 291 RSGSQKRTHSRVR-SHSWKRNHSRARSRT 318
>gi|6754638 microtubule-associated protein tau isoform 2 [Homo
sapiens]
Length = 441
Score = 33.9 bits (76), Expect = 0.37
Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
Query: 346 EEGVCDRQRVPDGQFSQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKL 405
E G+ D + D T R+V +S G + D+ +G G I
Sbjct: 105 EAGIGDTPSLEDEAAGHVTQ--ARMVSKSKDGTGSDDKKAKGA----DGKTKIATPRGAA 158
Query: 406 PPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAE--SQARPQTRTRTR 463
PP R+ +T T +S P+S RS + S P +R+RT
Sbjct: 159 PPGQKGQANATRIPA----KTPPAPKTPPSSGEP-PKSGDRSGYSSPGSPGTPGSRSRTP 213
Query: 464 TRTTPPWPGPRCPATARTPVMGPS 487
+ TPP P+ A RTP PS
Sbjct: 214 SLPTPPTREPKKVAVVRTPPKSPS 237
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,724,347
Number of Sequences: 37866
Number of extensions: 1450931
Number of successful extensions: 6294
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 5301
Number of HSP's gapped (non-prelim): 903
length of query: 524
length of database: 18,247,518
effective HSP length: 107
effective length of query: 417
effective length of database: 14,195,856
effective search space: 5919671952
effective search space used: 5919671952
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.