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Search of human proteins with 239750423
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750423 PREDICTED: hypothetical protein XP_002347390 [Homo
sapiens]
(212 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755909 PREDICTED: hypothetical protein [Homo sapiens] 438 e-123
gi|239750423 PREDICTED: hypothetical protein XP_002347390 [Homo ... 438 e-123
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ... 282 1e-76
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 45 5e-05
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 45 5e-05
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 45 5e-05
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 42 5e-04
gi|21464115 methyl-CpG binding domain protein 1 isoform 2 [Homo ... 40 0.002
gi|226437602 NK1 homeobox 2 [Homo sapiens] 39 0.003
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 39 0.003
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 39 0.003
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 39 0.003
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 39 0.003
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 39 0.003
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 39 0.004
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 37 0.009
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 37 0.012
gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 37 0.012
gi|239735519 SET binding factor 1 [Homo sapiens] 37 0.016
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 37 0.016
gi|239755607 PREDICTED: hypothetical protein XP_002344620 [Homo ... 36 0.021
gi|58219064 Src homology 2 domain containing E [Homo sapiens] 36 0.021
gi|238550210 Z-DNA binding protein 1 isoform c [Homo sapiens] 36 0.028
gi|238550208 Z-DNA binding protein 1 isoform b [Homo sapiens] 36 0.028
gi|238550206 Z-DNA binding protein 1 isoform a [Homo sapiens] 36 0.028
gi|194363768 homeobox D9 [Homo sapiens] 36 0.028
gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 36 0.028
gi|110227617 centaurin, gamma 3 isoform b [Homo sapiens] 35 0.036
>gi|239755909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 212
Score = 438 bits (1126), Expect = e-123
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL 60
MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL
Sbjct: 1 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL 60
Query: 61 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP 120
VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP
Sbjct: 61 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP 120
Query: 121 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR 180
GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR
Sbjct: 121 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR 180
Query: 181 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG 212
GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG
Sbjct: 181 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG 212
>gi|239750423 PREDICTED: hypothetical protein XP_002347390 [Homo
sapiens]
Length = 212
Score = 438 bits (1126), Expect = e-123
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL 60
MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL
Sbjct: 1 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL 60
Query: 61 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP 120
VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP
Sbjct: 61 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP 120
Query: 121 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR 180
GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR
Sbjct: 121 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR 180
Query: 181 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG 212
GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG
Sbjct: 181 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG 212
>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
sapiens]
Length = 756
Score = 282 bits (722), Expect = 1e-76
Identities = 162/254 (63%), Positives = 167/254 (65%), Gaps = 46/254 (18%)
Query: 5 RVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQA 64
RVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQA
Sbjct: 503 RVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQA 562
Query: 65 VAQHRLLQRLG------SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSEL--------- 109
VAQHRLLQRLG +P + R GPGG G +L
Sbjct: 563 VAQHRLLQRLGWRLPGQAPGQELLGQARPGGGLSSLSGGPGGGSGVGRWQLPGRAAAEDV 622
Query: 110 ----------------------RALGRPGAAGPGPGSGDASALAGGPRPVS--------- 138
RA G A G G G+ L G P +
Sbjct: 623 AEAAAKVLEGAGPGRPRRGQLLRAAGLGQARGGGAGAWLRGRLGLGWGPTACVPVVAARR 682
Query: 139 RDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEGEEGCR 198
DTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEGEEGCR
Sbjct: 683 PDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEGEEGCR 742
Query: 199 AGPFMAETQVVRPG 212
AGPFMAETQVVRPG
Sbjct: 743 AGPFMAETQVVRPG 756
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 45.1 bits (105), Expect = 5e-05
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135
S E + K+W + RR WK+Q PG A + G GPGPG+G + L GG
Sbjct: 700 SLTETQVKIWFQNRRTKWKKQNPGADTSAPTG--------GGGGPGPGAGPGTGLPGGLS 751
Query: 136 PVS 138
P+S
Sbjct: 752 PLS 754
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 45.1 bits (105), Expect = 5e-05
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135
S E + K+W + RR WK+Q PG A + G GPGPG+G + L GG
Sbjct: 135 SLTETQVKIWFQNRRTKWKKQNPGADTSAPTG--------GGGGPGPGAGPGTGLPGGLS 186
Query: 136 PVS 138
P+S
Sbjct: 187 PLS 189
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 45.1 bits (105), Expect = 5e-05
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135
S E + K+W + RR WK+Q PG A + G GPGPG+G + L GG
Sbjct: 297 SLTETQVKIWFQNRRTKWKKQNPGADTSAPTG--------GGGGPGPGAGPGTGLPGGLS 348
Query: 136 PVS 138
P+S
Sbjct: 349 PLS 351
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 41.6 bits (96), Expect = 5e-04
Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 17/172 (9%)
Query: 34 VGAIGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCW 93
+GA AR P + A A PA+ G + LGS ++ R+ K
Sbjct: 22 LGAALARTPVELA--AESAAPALSAAAAGVKI--------LGSGDKKLRRQKAAAGGK-- 69
Query: 94 KEQGPGGRGGASSSELRALGRPGAAGPGP---GSGDASALAGGPRPVS-RDTSSARSGAC 149
K + G +G + E R + A G G G+ A A G + + R R G
Sbjct: 70 KARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQK 129
Query: 150 CGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAG-EAEGAEEGEEGCRAG 200
+ + WRA AAA + N Q AAAG +++G E+ ++ AG
Sbjct: 130 AAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAG 181
Score = 34.3 bits (77), Expect = 0.080
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 18/130 (13%)
Query: 80 RRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP--GPGSGDASALAGGPRPV 137
R++ W+ RR+ K RGG S +P GP G S GG +P
Sbjct: 399 RKKPRWQNPRRRAQKAPAAKPRGGGSK-------KPRRRGPKAAKSRGGKSRSGGGKKPR 451
Query: 138 SRDTSSARSGACCGC-SRANSQYWRASSRAAAT-------ACNSQNSLQPRGAAAGEAEG 189
R + + A G SR + + R + AA T +S +L RG A EA G
Sbjct: 452 RRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKA-EAAG 510
Query: 190 AEEGEEGCRA 199
+ G ++
Sbjct: 511 EKATAAGAKS 520
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 41.6 bits (96), Expect = 5e-04
Identities = 43/144 (29%), Positives = 56/144 (38%), Gaps = 21/144 (14%)
Query: 89 RRKCWKEQGPGGRGGASSSEL-----RALGRPGAA-----GPGPGSGDASALAGGPRPVS 138
R WK +GP GR A+S+E R PGA P P + AS+LA P P
Sbjct: 53 RGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLA-APEPQV 111
Query: 139 RDTSS---ARSGACCGCSRA---NSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEE 192
D +S R G C +R + R+S A +C + + G G
Sbjct: 112 GDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRV 171
Query: 193 GEEGCRAG----PFMAETQVVRPG 212
G RAG P A+ RPG
Sbjct: 172 SGRGARAGSSTAPTRAQASPARPG 195
>gi|21464115 methyl-CpG binding domain protein 1 isoform 2 [Homo
sapiens]
Length = 586
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 74 LGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGG 133
L P R+ W+ ++R+C + + +GG S ++ A RPGA P S
Sbjct: 244 LRPPRPGLRRQWKCVQRRCLRGKHARRKGGCDS-KMAARRRPGAQPLPPPPPSQSPEPTE 302
Query: 134 PRPVSRDTSSARSGACCGCSR 154
P+P + + + GAC C R
Sbjct: 303 PQPYTNRRQNRKCGACAACLR 323
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 38.9 bits (89), Expect = 0.003
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135
S E + K+W + RR WK+Q PG G A +PGAAG G G G G P
Sbjct: 201 SLTETQVKIWFQNRRTKWKKQNPGADGAAQVG--GGAPQPGAAGGGGGGGS----GGSPG 254
Query: 136 P 136
P
Sbjct: 255 P 255
Score = 29.3 bits (64), Expect = 2.6
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 100 GRGGASSSELRALGRPGAAGPGPGSGDASALAGGPRPVSRDTSSAR 145
G+ +S +R L P AA GPG+G AS L G D R
Sbjct: 56 GKDASSRDPVRQLETPDAA--GPGAGQASPLEGSEAEEEEDAEDPR 99
>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 38.9 bits (89), Expect = 0.003
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135
S E + K+W + RR WK+Q PG G A +PGAAG G G G G P
Sbjct: 223 SLTETQVKIWFQNRRTKWKKQNPGADGAAQVG--GGAPQPGAAGGGGGGGS----GGSPG 276
Query: 136 P 136
P
Sbjct: 277 P 277
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 38.9 bits (89), Expect = 0.003
Identities = 55/191 (28%), Positives = 66/191 (34%), Gaps = 42/191 (21%)
Query: 37 IGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRR-------------- 82
+GA QR PP P+ P + + R+ R PA R
Sbjct: 144 LGANQKRQRMPPLPPSSPKARMERASRKLPS-RVNSRPPHPAPTRPTPRVQGGFGREPRA 202
Query: 83 -----KMWRRLRRKCWKEQGPGGRGGASSSELRA-----LGRP----GAAGPGPGSGDAS 128
+ W R ++ GP R G LR+ GRP GAAG G GSG A+
Sbjct: 203 AAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTG-GSGWAA 261
Query: 129 ALAGGPRPVSRDTSSARSGACC----GCSRANSQYWRASSRAAATACNSQNSLQPRGAAA 184
AL G P P S SSA C GC W + A S P G
Sbjct: 262 ALRGWPAPSSFAASSALPEECLPPRRGCG------W--AELLEREAGGSDTGHLPLGNEG 313
Query: 185 GEAEGAEEGEE 195
G EG E E
Sbjct: 314 GRGEGEGEASE 324
>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 38.9 bits (89), Expect = 0.003
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135
S E + K+W + RR WK+Q PG G A +PGAAG G G G G P
Sbjct: 223 SLTETQVKIWFQNRRTKWKKQNPGADGAAQVG--GGAPQPGAAGGGGGGGS----GGSPG 276
Query: 136 P 136
P
Sbjct: 277 P 277
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 38.9 bits (89), Expect = 0.003
Identities = 55/191 (28%), Positives = 66/191 (34%), Gaps = 42/191 (21%)
Query: 37 IGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRR-------------- 82
+GA QR PP P+ P + + R+ R PA R
Sbjct: 144 LGANQKRQRMPPLPPSSPKARMERASRKLPS-RVNSRPPHPAPTRPTPRVQGGFGREPRA 202
Query: 83 -----KMWRRLRRKCWKEQGPGGRGGASSSELRA-----LGRP----GAAGPGPGSGDAS 128
+ W R ++ GP R G LR+ GRP GAAG G GSG A+
Sbjct: 203 AAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTG-GSGWAA 261
Query: 129 ALAGGPRPVSRDTSSARSGACC----GCSRANSQYWRASSRAAATACNSQNSLQPRGAAA 184
AL G P P S SSA C GC W + A S P G
Sbjct: 262 ALRGWPAPSSFAASSALPEECLPPRRGCG------W--AELLEREAGGSDTGHLPLGNEG 313
Query: 185 GEAEGAEEGEE 195
G EG E E
Sbjct: 314 GRGEGEGEASE 324
>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 38.9 bits (89), Expect = 0.003
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135
S E + K+W + RR WK+Q PG G A +PGAAG G G G G P
Sbjct: 223 SLTETQVKIWFQNRRTKWKKQNPGADGAAQVG--GGAPQPGAAGGGGGGGS----GGSPG 276
Query: 136 P 136
P
Sbjct: 277 P 277
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 38.9 bits (89), Expect = 0.003
Identities = 46/141 (32%), Positives = 53/141 (37%), Gaps = 31/141 (21%)
Query: 80 RRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAG----PGPGSGDASAL----- 130
RRR++ RR R+ GPGG A RAL PGA G P PG G AL
Sbjct: 61 RRRRLQRR--RQLLAGTGPGGEARA-----RALLGPGALGLGPRPPPGPGPPFALGCGGA 113
Query: 131 -----------AGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQP 179
GG P + D S +G G RA + R A L
Sbjct: 114 ARWYPRAHGGYGGGLSPDTSDRDSPETGEEMG--RAEGAWPRGPGPGAVQ--REAAELAA 169
Query: 180 RGAAAGEAEGAEEGEEGCRAG 200
RG AAG E +E E AG
Sbjct: 170 RGPAAGTEEASELAEVPAAAG 190
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 38.5 bits (88), Expect = 0.004
Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 23/141 (16%)
Query: 72 QRLGSPAERRRKMW---RRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDAS 128
+R+ P +RR W R R C G GGA A GPG SG
Sbjct: 99 ERIPEPVQRRIVYWSFPRSEREICMYSSFNTG-GGA------------AGGPGDDSGGGG 145
Query: 129 ALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAE 188
GG S + +A S A + A++ AAA A + + P AAG A+
Sbjct: 146 GAGGGGGGGSSSSPAATSAAATSAA-------AAAAAAAAAAAAAAGAGAPSVGAAGAAD 198
Query: 189 GAEEGEEGCRAGPFMAETQVV 209
G +E R G + E+ V
Sbjct: 199 GGDETRLPFRRGIALLESGCV 219
Score = 30.8 bits (68), Expect = 0.89
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 16/63 (25%)
Query: 89 RRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPRPVSRDTSSARSGA 148
+R C + G GG GG+S G G G G +SA GPR A + A
Sbjct: 12 KRLCCRPGGGGGGGGSS-----------GGGGGAGGGYSSACRPGPR-----AGGAAAAA 55
Query: 149 CCG 151
CG
Sbjct: 56 ACG 58
Score = 28.1 bits (61), Expect = 5.7
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 101 RGGASSSELRALGRPGAAGPGPGSGDASALAGGP-----RPVSRDTSSARSGACCG 151
RG R RPG G G GS AGG RP R +A + AC G
Sbjct: 4 RGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGG 59
>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
Length = 321
Score = 37.4 bits (85), Expect = 0.009
Identities = 56/190 (29%), Positives = 67/190 (35%), Gaps = 44/190 (23%)
Query: 37 IGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRR-------------- 82
+GA QR PP P+ P + + R+ R PA R
Sbjct: 144 LGANQKRQRMPPLPPSSPKARMERASRKLPS-RVNSRPPHPAPTRPTPRVQGGFGREPRA 202
Query: 83 -----KMWRRLRRKCWKEQGPGGRGGASSSELRA-----LGRP----GAAGPGPGSGDAS 128
+ W R ++ GP R G LR+ GRP GAAG G GSG A+
Sbjct: 203 AAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTG-GSGWAA 261
Query: 129 ALAGGPRPVSRDTSSARSGACC----GCSRANSQYWRASSRAAATACNSQNSLQPRGAAA 184
AL G P P S SSA C GC W + A S P G
Sbjct: 262 ALRGWPAPSSFAASSALPEECLPPRRGCG------W--AELLEREAGGSDTGHLPLGNEG 313
Query: 185 GEAEGAEEGE 194
G EG EGE
Sbjct: 314 GRGEG--EGE 321
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 37.0 bits (84), Expect = 0.012
Identities = 49/208 (23%), Positives = 68/208 (32%), Gaps = 48/208 (23%)
Query: 28 EELQHAVGAI----GARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRL--------- 74
E L H A+ + G +PPAL PA V A + L +
Sbjct: 67 ERLFHRQDALWISTSSAGTGGAEPPALSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGG 126
Query: 75 --------GSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGD 126
G+P RR + L W P GR G G PG++ P PG+G
Sbjct: 127 LSPDPKPGGAPTSSRRPL---LSSPSWGGPEPEGRAGG--------GIPGSSSPHPGTGS 175
Query: 127 ASALAGGPRPVSR-----DTSSARSGACCGCSRANSQYW---------RASSRAAATACN 172
P P + TS A++G G S W + S +A T +
Sbjct: 176 RRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLS--WPESEGKPRVKGSKSSAGTGAS 233
Query: 173 SQNSLQPRGAAAGEAEGAEEGEEGCRAG 200
+ A G + + G G AG
Sbjct: 234 VSAAATAAAAGGGGSTASTSGGVGAGAG 261
>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
Length = 793
Score = 37.0 bits (84), Expect = 0.012
Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 29/197 (14%)
Query: 20 GLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAE 79
G Y+ + +G G + P R+PPA A P+ G A R +R G P +
Sbjct: 67 GTKYVVLKRRYRDLLGEEGLQRP--REPPA--AAPSAGGA----APCSPRGARR-GEPPQ 117
Query: 80 RRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGA-AGPGPGSGDASALAGGPRPVS 138
++ RR RR+ E+ P G A +++ G PG+ + PG G S + G RP
Sbjct: 118 QQP---RRRRREKEPEEEPAG-AAARAADAACNGLPGSDSRRAPGKGGGSKGSPGQRPPV 173
Query: 139 RDTSSARSGACCGCSRANSQ---YWRASSRAAATACNSQNSLQPRGAAAGEAE------- 188
++A + A C+ A +Q W A +L P A A E
Sbjct: 174 PAAAAAGAQARASCAAAKTQGRCCWECLQNNLAVLPGELGAL-PHSATAEEKPARALPAQ 232
Query: 189 ----GAEEGEEGCRAGP 201
+ E EEG A P
Sbjct: 233 DDRGASREREEGALAEP 249
>gi|239735519 SET binding factor 1 [Homo sapiens]
Length = 1893
Score = 36.6 bits (83), Expect = 0.016
Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 48 PALPACPAVHGGLVGQAVAQ-HRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASS 106
P +CP + + + + RL LG PAER + W R++ E P GRG SS
Sbjct: 1663 PCYDSCPRAQPDAISRLLEELQRLETELGQPAERWKDTWDRVKAAQRLEGRPDGRGTPSS 1722
Query: 107 -------SELRALGRPGAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQY 159
R+LG GP S + TS +R A S SQ+
Sbjct: 1723 LLVSTAPHHRRSLG--VYLQEGPVGSTLSLSLDSDQSSGSTTSGSRQAARRSTSTLYSQF 1780
Query: 160 WRASS 164
A S
Sbjct: 1781 QTAES 1785
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 36.6 bits (83), Expect = 0.016
Identities = 39/130 (30%), Positives = 49/130 (37%), Gaps = 21/130 (16%)
Query: 72 QRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALA 131
QRLG ER R R + E+ PGG+G + GRP + PG A A A
Sbjct: 1308 QRLGEQRERSASPQRAARPRL--EEAPGGQGRPEA------GRPASEARAPGLAAADA-A 1358
Query: 132 GGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAE 191
R ++ A +G S+ R AA A G+ A EAEG
Sbjct: 1359 DAARAGGKEAPRAAAG---------SELCRREGPGAAPAFAGPGG---GGSGALEAEGRA 1406
Query: 192 EGEEGCRAGP 201
G R GP
Sbjct: 1407 GARAGPRPGP 1416
Score = 28.1 bits (61), Expect = 5.7
Identities = 29/95 (30%), Positives = 33/95 (34%), Gaps = 18/95 (18%)
Query: 54 PAVHGGLVGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPG------GRGGASSS 107
PA G A A R G R L R+ +GPG G GG S
Sbjct: 1343 PASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRR----EGPGAAPAFAGPGGGGSG 1398
Query: 108 ELRALGR--------PGAAGPGPGSGDASALAGGP 134
L A GR PG PG +A+A GP
Sbjct: 1399 ALEAEGRAGARAGPRPGPRPPGGAPARKAAVAPGP 1433
>gi|239755607 PREDICTED: hypothetical protein XP_002344620 [Homo
sapiens]
Length = 102
Score = 36.2 bits (82), Expect = 0.021
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 76 SPAERRRKMWRRLRRKCWKEQGPG----GRGGASSSELRALGR----PGAAGPGPGSGDA 127
SP++ R R+R C + P G GGA ++ G PGAAGPGPG G A
Sbjct: 18 SPSQASRGEGTRMR--CRSARSPSSHAAGGGGARRTKREERGHRGGGPGAAGPGPGLGRA 75
Query: 128 SALAGGPRP 136
A RP
Sbjct: 76 EAKGRNRRP 84
>gi|58219064 Src homology 2 domain containing E [Homo sapiens]
Length = 495
Score = 36.2 bits (82), Expect = 0.021
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 98 PGGRGGASSSELRALGRPGAAGPGPGSGDASALAG--------GPRP--VSRDTSSARSG 147
PGG GG +LR G AGPGPG G ++ A GP+ +SRD+
Sbjct: 58 PGGGGG----KLRKNSEAGGAGPGPGKGRKNSAAELGSGRAGVGPKDSRLSRDSLQGLIQ 113
Query: 148 ACCGCSRANSQYWRASSRAAAT 169
A G R NS+ AT
Sbjct: 114 AAAGKGRKNSRATEEEPHRGAT 135
>gi|238550210 Z-DNA binding protein 1 isoform c [Homo sapiens]
Length = 354
Score = 35.8 bits (81), Expect = 0.028
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 106 SSELRALGRP--GAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRAS 163
S+E+R G P G A PGS SA A GP S + G A + ++
Sbjct: 194 SNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE-ASFEARIPSPGTHPEGEAAQRIHMKSC 252
Query: 164 SRAAATACNSQN-SLQPRGAAAGEAEGAEEGEEGCRAGPFMAETQ 207
AT NS S+ P A G G+ EGE G AG A+TQ
Sbjct: 253 FLEDATIGNSNKMSISPGVAGPGGVAGSGEGEPGEDAGRRPADTQ 297
>gi|238550208 Z-DNA binding protein 1 isoform b [Homo sapiens]
Length = 428
Score = 35.8 bits (81), Expect = 0.028
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 106 SSELRALGRP--GAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRAS 163
S+E+R G P G A PGS SA A GP S + G A + ++
Sbjct: 268 SNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE-ASFEARIPSPGTHPEGEAAQRIHMKSC 326
Query: 164 SRAAATACNSQN-SLQPRGAAAGEAEGAEEGEEGCRAGPFMAETQ 207
AT NS S+ P A G G+ EGE G AG A+TQ
Sbjct: 327 FLEDATIGNSNKMSISPGVAGPGGVAGSGEGEPGEDAGRRPADTQ 371
>gi|238550206 Z-DNA binding protein 1 isoform a [Homo sapiens]
Length = 429
Score = 35.8 bits (81), Expect = 0.028
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 106 SSELRALGRP--GAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRAS 163
S+E+R G P G A PGS SA A GP S + G A + ++
Sbjct: 269 SNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE-ASFEARIPSPGTHPEGEAAQRIHMKSC 327
Query: 164 SRAAATACNSQN-SLQPRGAAAGEAEGAEEGEEGCRAGPFMAETQ 207
AT NS S+ P A G G+ EGE G AG A+TQ
Sbjct: 328 FLEDATIGNSNKMSISPGVAGPGGVAGSGEGEPGEDAGRRPADTQ 372
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 35.8 bits (81), Expect = 0.028
Identities = 42/157 (26%), Positives = 53/157 (33%), Gaps = 21/157 (13%)
Query: 48 PALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSS 107
P+ P A GL V L P R W E PG GGA
Sbjct: 83 PSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRS---------WMEPLPGFPGGAGGG 133
Query: 108 ELRALGRPGAAGPGPG-SGDASALAGGPRPVSR----------DTSSARSGACCGCSRAN 156
G PG GP PG SG A+ G +P +R TSS+ + R
Sbjct: 134 GGGGGGGPG-RGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSSTSLSSSSKRTE 192
Query: 157 SQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEG 193
R S ++ + + LQ + AAA G G
Sbjct: 193 CSVARESQGSSGPEFSCNSFLQEKAAAATGGTGPGAG 229
>gi|4758156 diacylglycerol kinase, iota [Homo sapiens]
Length = 1065
Score = 35.8 bits (81), Expect = 0.028
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 98 PGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANS 157
P RG A + A GP G+ A + A G ++ +S+ G S +
Sbjct: 14 PAARGPARAPAAAAAAAASPPGPCSGAACAPSAAAGAGAMNPSSSAGEEKGATGGSSS-- 71
Query: 158 QYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEGEEGCRAG 200
+ S A + ++ PRGA + A GA +E AG
Sbjct: 72 ----SGSGAGSCCLGAEGGADPRGAGSAAAAGAAALDEPAAAG 110
>gi|110227617 centaurin, gamma 3 isoform b [Homo sapiens]
Length = 396
Score = 35.4 bits (80), Expect = 0.036
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 98 PGGRGGASSSELRALGRPGAAGPGP--GSGDASALAGGP 134
PGG GGA++ +L G+ G AGPG G G + LAGGP
Sbjct: 20 PGG-GGAAAQQLVCGGQFGGAGPGAGGGGGPSQQLAGGP 57
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,552,976
Number of Sequences: 37866
Number of extensions: 604646
Number of successful extensions: 5959
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 492
Number of HSP's that attempted gapping in prelim test: 4937
Number of HSP's gapped (non-prelim): 1349
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.