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Search of human proteins with 239749938
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749938 PREDICTED: hypothetical protein XP_002347218 [Homo
sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749938 PREDICTED: hypothetical protein XP_002347218 [Homo ... 414 e-116
gi|239744260 PREDICTED: hypothetical protein XP_002343086 [Homo ... 414 e-116
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 44 7e-05
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 42 5e-04
gi|112421108 capicua homolog [Homo sapiens] 42 5e-04
gi|148227044 ecotropic viral integration site 2B [Homo sapiens] 40 0.001
gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens] 40 0.002
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ... 39 0.002
gi|61966919 hypothetical protein LOC442444 [Homo sapiens] 39 0.002
gi|239755571 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens] 38 0.005
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 38 0.005
gi|148762978 similar to CG15216-PA [Homo sapiens] 38 0.005
gi|139394604 bromo adjacent homology domain containing 1 [Homo s... 38 0.007
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 38 0.007
gi|239754458 PREDICTED: hypothetical protein [Homo sapiens] 37 0.009
gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo ... 37 0.009
gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo ... 37 0.009
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens] 37 0.011
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens] 37 0.011
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 37 0.011
gi|123173757 RAVER1 [Homo sapiens] 37 0.011
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.011
gi|33286446 opioid growth factor receptor [Homo sapiens] 37 0.015
gi|54860079 nadrin isoform 1 [Homo sapiens] 37 0.015
gi|54860105 nadrin isoform 2 [Homo sapiens] 37 0.015
gi|239751080 PREDICTED: hypothetical protein XP_002347700 [Homo ... 36 0.019
gi|239745567 PREDICTED: hypothetical protein XP_002344149 [Homo ... 36 0.019
>gi|239749938 PREDICTED: hypothetical protein XP_002347218 [Homo
sapiens]
Length = 201
Score = 414 bits (1064), Expect = e-116
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MPARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQP 60
MPARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQP
Sbjct: 1 MPARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQP 60
Query: 61 RQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASA 120
RQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASA
Sbjct: 61 RQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASA 120
Query: 121 RHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFVQRS 180
RHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFVQRS
Sbjct: 121 RHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFVQRS 180
Query: 181 AALVAGDARTLLPRCSRRARG 201
AALVAGDARTLLPRCSRRARG
Sbjct: 181 AALVAGDARTLLPRCSRRARG 201
>gi|239744260 PREDICTED: hypothetical protein XP_002343086 [Homo
sapiens]
Length = 201
Score = 414 bits (1064), Expect = e-116
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MPARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQP 60
MPARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQP
Sbjct: 1 MPARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQP 60
Query: 61 RQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASA 120
RQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASA
Sbjct: 61 RQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASA 120
Query: 121 RHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFVQRS 180
RHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFVQRS
Sbjct: 121 RHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFVQRS 180
Query: 181 AALVAGDARTLLPRCSRRARG 201
AALVAGDARTLLPRCSRRARG
Sbjct: 181 AALVAGDARTLLPRCSRRARG 201
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 44.3 bits (103), Expect = 7e-05
Identities = 51/176 (28%), Positives = 68/176 (38%), Gaps = 28/176 (15%)
Query: 28 SPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQ 87
SP+ + L L+ PG + A+ P P+ +P L RP T SP S
Sbjct: 46 SPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARP------DLGRPWATRSAASPHSKM 99
Query: 88 GV-SRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDL-------------EPNPHG 133
+ S +R S +P H L AH A +P+ +L P P
Sbjct: 100 WLGSHLRGGEMSGDP------HTDL--PAHPAQTTNPELELPADPAQPDPAPLSRPAPPR 151
Query: 134 TAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFVQRSAALVAGDAR 189
A Q PAE +A PR GRT+G +G S RA + A V G AR
Sbjct: 152 PAHQSPAEEGPRGAAGGGPRTPPAGRTQGQSGPRESPRASPGSAAPAMASVRGPAR 207
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 41.6 bits (96), Expect = 5e-04
Identities = 44/142 (30%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 44 PGAGTSHTCADP--PGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEP 101
PG+ S DP PGP + GE L P+G P Q+ Q G G P
Sbjct: 1208 PGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQGAPG------ERGPPGS 1261
Query: 102 PLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQR--PAEPASSA---SAHDSPRLLR 156
P ++ G+ P ++ + A P D P G R P P S+A S D+
Sbjct: 1262 PGLQ-GFPGITPPSNISGA--PGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGA 1318
Query: 157 DGR--TRGWAGIAGSRRAPAVF 176
G T+GWAG +G + P VF
Sbjct: 1319 PGTPGTKGWAGDSGPQGRPGVF 1340
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 41.6 bits (96), Expect = 5e-04
Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 20/180 (11%)
Query: 2 PARAQASPVFPVSPASV----LKLVLPRLISPKVRS-KSWQLRLQHLPGAGTSHTCADPP 56
PA A +P P A+ LV P+ P ++ + + + +P + P
Sbjct: 1141 PATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRP 1200
Query: 57 GPQPRQPLHGEPAGLWRPLG---------TPPQRSPQSGQGVSRVRASSGSPEPPLVRCS 107
GP PRQPL EP + P TPP P R+S P P R S
Sbjct: 1201 GPAPRQPL--EPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSPPLPPPAEERTS 1258
Query: 108 HAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIA 167
G PE T +++ P + G + EP + S +P + G + +G A
Sbjct: 1259 AKG--PE--TMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSSGRA 1314
>gi|148227044 ecotropic viral integration site 2B [Homo sapiens]
Length = 448
Score = 40.0 bits (92), Expect = 0.001
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 74 PLGTPPQRSPQ-SGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPH 132
PLG P Q S SGQ +S + ++G P P + S +PEAHT++ +P +
Sbjct: 55 PLGQPTQFSDTFSGQSISPAKVTAGQPTPAVYTSSE---KPEAHTSAG-------QPLAY 104
Query: 133 GTAQQRP-AEPASSASAHDSPRLLRDGRT 160
T Q P A +S + S R L RT
Sbjct: 105 NTKQPTPIANTSSQQAVFTSARQLPSART 133
>gi|239742114 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 329
Score = 39.7 bits (91), Expect = 0.002
Identities = 42/154 (27%), Positives = 59/154 (38%), Gaps = 22/154 (14%)
Query: 60 PRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTAS 119
P +P P+ RPL P SP +G+ + + SGS S A +P
Sbjct: 127 PTEPAFRRPSSADRPLAPGPSSSPGAGRAPRAMASPSGS--------SEATGKPRGRDGG 178
Query: 120 ARHPQDDLEPNPHG---TAQQRPAEPASSASAHDSPRLLR---------DGRTRGWAGIA 167
R +DD+ P ++ A+P D+PR R DGR G A
Sbjct: 179 PRREEDDVPPEEKRLRLLLERGSAQPEDCEDGEDAPRPGRKKTGTQTGGDGRGVSDVG-A 237
Query: 168 GSRRAPAVFVQRSAALVAGDA-RTLLPRCSRRAR 200
G R V + VAG + ++ R RRAR
Sbjct: 238 GVRGCQGRGVGAAGGSVAGPGLKLVIERQLRRAR 271
>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 412
Score = 39.3 bits (90), Expect = 0.002
Identities = 51/153 (33%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 56 PGPQPRQPLHGEPAGL-WRPLGTPPQRSPQSGQGVSRVRASS--GSPEPPLVRCSHAGLR 112
PGP PR P G G P+ PQR +G SR+ S+ + + PL H
Sbjct: 33 PGP-PRWPAPGRRRGFRLGPVPWRPQR--HNGDEASRLFGSAVVKAQQVPLSLGGHLRGA 89
Query: 113 PEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRA 172
P+A A P + P+P GT ++ A +AS L + R G RR
Sbjct: 90 PDAEPA---RPAEGARPSP-GTRARKTRPRARTASTRRPCALCPEPALRAQLGRL-DRRG 144
Query: 173 PAVFVQRSAALVAG--DAR--TLLPRCSRRARG 201
P VQR+ AL AG DA L PR S+ RG
Sbjct: 145 PQHRVQRALALSAGLEDAHLPCLSPRPSQEMRG 177
>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
Length = 446
Score = 39.3 bits (90), Expect = 0.002
Identities = 51/153 (33%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 56 PGPQPRQPLHGEPAGL-WRPLGTPPQRSPQSGQGVSRVRASS--GSPEPPLVRCSHAGLR 112
PGP PR P G G P+ PQR +G SR+ S+ + + PL H
Sbjct: 33 PGP-PRWPAPGRRRGFRLGPVPWRPQR--HNGDEASRLFGSAVVKAQQVPLSLGGHLRGA 89
Query: 113 PEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRA 172
P+A A P + P+P GT ++ A +AS L + R G RR
Sbjct: 90 PDAEPA---RPAEGARPSP-GTRARKTRPRARTASTRRPCALCPEPALRAQLGRL-DRRG 144
Query: 173 PAVFVQRSAALVAG--DAR--TLLPRCSRRARG 201
P VQR+ AL AG DA L PR S+ RG
Sbjct: 145 PQHRVQRALALSAGLEDAHLPCLSPRPSQEMRG 177
>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
sapiens]
Length = 487
Score = 39.3 bits (90), Expect = 0.002
Identities = 51/153 (33%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 56 PGPQPRQPLHGEPAGL-WRPLGTPPQRSPQSGQGVSRVRASS--GSPEPPLVRCSHAGLR 112
PGP PR P G G P+ PQR +G SR+ S+ + + PL H
Sbjct: 33 PGP-PRWPAPGRRRGFRLGPVPWRPQR--HNGDEASRLFGSAVVKAQQVPLSLGGHLRGA 89
Query: 113 PEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRA 172
P+A A P + P+P GT ++ A +AS L + R G RR
Sbjct: 90 PDAEPA---RPAEGARPSP-GTRARKTRPRARTASTRRPCALCPEPALRAQLGRL-DRRG 144
Query: 173 PAVFVQRSAALVAG--DAR--TLLPRCSRRARG 201
P VQR+ AL AG DA L PR S+ RG
Sbjct: 145 PQHRVQRALALSAGLEDAHLPCLSPRPSQEMRG 177
>gi|61966919 hypothetical protein LOC442444 [Homo sapiens]
Length = 1035
Score = 39.3 bits (90), Expect = 0.002
Identities = 40/154 (25%), Positives = 55/154 (35%), Gaps = 33/154 (21%)
Query: 2 PARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPR 61
P + S + P P + + + P P+ R + Q P AG SH C +PP +
Sbjct: 334 PPKTLVSSLHPEPPETGVSHLCPE--PPETRVSPLR---QLPPEAGVSHLCPEPPKTR-- 386
Query: 62 QPLHGEPAGLWRPLGTPPQRSPQSGQGVS-------RVRASSGSPEPPLVRCSHAGLRPE 114
PP R GVS + R S+ EPP + SH L P
Sbjct: 387 ---------------VPPLRPETPKNGVSPLFPEPPKTRISNLRSEPPKIGVSHLCLEPP 431
Query: 115 AHTASARHPQDDLEPNPHGTAQQRPAEPASSASA 148
S P EP G + RP P + S+
Sbjct: 432 KTRGSHLRP----EPPETGVSHLRPEPPKTRVSS 461
Score = 38.9 bits (89), Expect = 0.003
Identities = 43/149 (28%), Positives = 57/149 (38%), Gaps = 23/149 (15%)
Query: 2 PARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPR 61
P + + S + P P + + + P PK R S L P G SH C +PP +
Sbjct: 430 PPKTRGSHLRPEPPETGVSHLRPE--PPKTRVSSLHLEP---PETGVSHLCPEPP-EKDV 483
Query: 62 QPLHGEP--AGLWRPLGTPPQ------RSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRP 113
L EP G+ PP+ R S GVS +R PEPP + S P
Sbjct: 484 SHLRPEPPDTGVSHLCPEPPKTRVSHLRPEPSETGVSHLR-----PEPPKILVSSLHQAP 538
Query: 114 EAHTASARHPQDDLEPNPHGTAQQRPAEP 142
+ S P EP G + RP P
Sbjct: 539 PESSVSHLRP----EPPETGVSHLRPEPP 563
Score = 38.5 bits (88), Expect = 0.004
Identities = 42/155 (27%), Positives = 55/155 (35%), Gaps = 25/155 (16%)
Query: 2 PARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLR-----LQHL----PGAGTSHTC 52
P + Q S + P + + + P PK + S L + HL PG G SH C
Sbjct: 226 PPKTQVSSLHLEPPETGVSHLRPE--PPKTQVSSLHLEPPETGVSHLYLEPPGTGVSHLC 283
Query: 53 ADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLR 112
+PP + LH EP P P + R S PEP SH
Sbjct: 284 PEPPKTRVSH-LHREP---------PETGVPDLCLEPPKSRVSHLRPEPSETGVSHLHPE 333
Query: 113 PEAHTASARHPQDDLEPNPHGTAQQRPAEPASSAS 147
P S+ HP EP G + P P + S
Sbjct: 334 PPKTLVSSLHP----EPPETGVSHLCPEPPETRVS 364
Score = 37.4 bits (85), Expect = 0.009
Identities = 38/151 (25%), Positives = 52/151 (34%), Gaps = 32/151 (21%)
Query: 2 PARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPR 61
P + S + P P + + + P PK R S + P G SH C +PP +
Sbjct: 610 PPETRVSHLRPEPPETGVSHLRPE--PPKTRMYSLR---PEPPNTGVSHLCPEPPKTR-- 662
Query: 62 QPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASAR 121
+ + P P++G S PEPP R SH P S
Sbjct: 663 -------------VSSLPPEPPETG-------VSHLCPEPPETRVSHLRPEPPETGVSRL 702
Query: 122 HPQDDLEPNPHGTAQQRPAEPASSASAHDSP 152
HP+ P AEP S +H P
Sbjct: 703 HPEP-----PKTRVSSLHAEPPESRVSHLCP 728
Score = 32.0 bits (71), Expect = 0.36
Identities = 38/131 (29%), Positives = 48/131 (36%), Gaps = 35/131 (26%)
Query: 44 PGAGTSHTCADPP-------GPQPRQP----LHGEPAGLWRPLGTPPQRSPQSG------ 86
P G SH C +PP P+P + L EP + + + Q P+S
Sbjct: 491 PDTGVSHLCPEPPKTRVSHLRPEPSETGVSHLRPEPPKIL--VSSLHQAPPESSVSHLRP 548
Query: 87 ----QGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGT-AQQRPAE 141
GVS +R PEPP R LRPE H L P P T P E
Sbjct: 549 EPPETGVSHLR-----PEPPKTRM--YSLRPEPPDTGVSH----LCPEPPKTRVSSLPPE 597
Query: 142 PASSASAHDSP 152
P + +H P
Sbjct: 598 PPETGVSHLCP 608
Score = 30.4 bits (67), Expect = 1.1
Identities = 33/125 (26%), Positives = 44/125 (35%), Gaps = 22/125 (17%)
Query: 24 PRLISPKVRSKSWQLRLQHL----PGAGTSHTCADPPGPQPRQPLHGEP--AGLWRPLGT 77
P+++ + + + HL P G SH +PP + L EP G+
Sbjct: 527 PKILVSSLHQAPPESSVSHLRPEPPETGVSHLRPEPPKTR-MYSLRPEPPDTGVSHLCPE 585
Query: 78 PPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQ 137
PP + R SS PEPP SH P S P EP G +
Sbjct: 586 PP-----------KTRVSSLPPEPPETGVSHLCPEPPETRVSHLRP----EPPETGVSHL 630
Query: 138 RPAEP 142
RP P
Sbjct: 631 RPEPP 635
Score = 30.4 bits (67), Expect = 1.1
Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 29/114 (25%)
Query: 44 PGAGTSHTCADPPG-------PQPRQP----LHGEP--AGLWRPLGTPPQ--------RS 82
P G SH C +PP P+P + LH EP + PP+
Sbjct: 671 PETGVSHLCPEPPETRVSHLRPEPPETGVSRLHPEPPKTRVSSLHAEPPESRVSHLCPEP 730
Query: 83 PQSGQGVSRV-----RASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNP 131
P++G R R SS PEP R SH LRPE H +L P P
Sbjct: 731 PETGVSHLRPEPPKPRVSSLRPEPLETRVSH--LRPEPPETGVSHLHPEL-PKP 781
Score = 30.0 bits (66), Expect = 1.4
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 95 SSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASA 148
SS PEPP SH +P S+ H LEP G + RP P + S+
Sbjct: 208 SSLRPEPPETGVSHLRPQPPKTQVSSLH----LEPPETGVSHLRPEPPKTQVSS 257
>gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 38.1 bits (87), Expect = 0.005
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 20/153 (13%)
Query: 60 PRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTAS 119
P +P P+ RPL P SP +G+ + + SGS S A +P
Sbjct: 95 PTEPALRRPSSADRPLAPGPSSSPGAGRAPGAMASPSGS--------SKATGKPRGRDGR 146
Query: 120 ARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLR---------DGR--TRGWAGIAG 168
R +DD+ P A D+PR R DGR + AG+ G
Sbjct: 147 PRREEDDVTPEEKRLRLLLEEGSAQPDDGEDAPRPGRKETGTQTGGDGRGVSDAGAGVRG 206
Query: 169 SRRAPAVFVQRSAALVAGDARTLL-PRCSRRAR 200
R V + VAG L+ R RRAR
Sbjct: 207 CRGCRGRGVGAAGGSVAGPGLKLVTERQLRRAR 239
>gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 364
Score = 38.1 bits (87), Expect = 0.005
Identities = 42/153 (27%), Positives = 56/153 (36%), Gaps = 20/153 (13%)
Query: 60 PRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTAS 119
P +P P+ RPL P SP +G+ + + SGS S A +P
Sbjct: 198 PTEPALRRPSSADRPLAPGPSSSPGAGRAPGAMASPSGS--------SKATGKPRGRDGR 249
Query: 120 ARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLR---------DGR--TRGWAGIAG 168
R +DD+ P A D+PR R DGR + AG+ G
Sbjct: 250 PRREEDDVTPEEKRLRLLLEEGSAQPDDGEDAPRPGRKETGTQTGGDGRGVSDAGAGVRG 309
Query: 169 SRRAPAVFVQRSAALVAGDARTLL-PRCSRRAR 200
R V + VAG L+ R RRAR
Sbjct: 310 CRGCRGRGVGAAGGSVAGPGLKLVTERQLRRAR 342
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 38.1 bits (87), Expect = 0.005
Identities = 39/130 (30%), Positives = 51/130 (39%), Gaps = 9/130 (6%)
Query: 74 PLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAH---TASARHPQDDLEPN 130
P PP P S +SS SP PPL + GL+P A ++ PQ
Sbjct: 37 PAAYPPL--PAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAAT 94
Query: 131 PHGTAQ--QRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFVQRSAALVAGDA 188
PHG RP+ P +S +A S + + A S A A +AA + A
Sbjct: 95 PHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPA 154
Query: 189 RTL--LPRCS 196
L LPR S
Sbjct: 155 GLLAGLPRFS 164
>gi|148762978 similar to CG15216-PA [Homo sapiens]
Length = 976
Score = 38.1 bits (87), Expect = 0.005
Identities = 32/80 (40%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 44 PGAG-TSHTCADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSG----- 97
P AG S AD GPQ R+ L PAG P PP RSP + G + A+ G
Sbjct: 593 PTAGQASEPAADCLGPQLRRLLDSRPAGSGAPALAPP-RSPPASAGSAEEPAAPGEAADA 651
Query: 98 SPEP-----PLVRCSHAGLR 112
SPEP L+ CS+A R
Sbjct: 652 SPEPSADEDDLMTCSNARCR 671
>gi|139394604 bromo adjacent homology domain containing 1 [Homo
sapiens]
Length = 780
Score = 37.7 bits (86), Expect = 0.007
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
Query: 63 PLHGEPAGLWRPL-GTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASAR 121
P G PA PL G P P + + V ++ + P+ C + +P + + S
Sbjct: 491 PEAGHPASPAHPLLGCPVPSVPPAAEPVPHLQTPTSEPQTVARACPQSA-KPPSGSKSGL 549
Query: 122 HPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWAGIAGSRRAPAVFV 177
A +RP+ P PR R RT GW + G+ AV+V
Sbjct: 550 RTGSSCRHTARSKAARRPSHPKQPRVQRPRPRRRRRRRTNGWVPV-GAACEKAVYV 604
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 37.7 bits (86), Expect = 0.007
Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 15/146 (10%)
Query: 2 PARAQASPVFPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPR 61
P R + +P P P PR SP R S ++ ++ P A PP P P+
Sbjct: 566 PPRRRRTPTPP--PRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPP-PK 622
Query: 62 QPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASAR 121
+ P R +PP + Q V++ R+ P L G P T AR
Sbjct: 623 RRASPSPPPKRRVSHSPPPK--QRSSPVTKRRS------PSLSSKHRKGSSPSRSTREAR 674
Query: 122 HPQDDLEPNPHGTAQQRPAEPASSAS 147
PQ PN + RP P +S+S
Sbjct: 675 SPQ----PNKRHSPSPRPRAPQTSSS 696
Score = 35.8 bits (81), Expect = 0.025
Identities = 41/171 (23%), Positives = 61/171 (35%), Gaps = 24/171 (14%)
Query: 2 PARAQASPVFP----VSPASVLKLVLPRLISPKVRS------KSWQLRLQHLPGAGTSHT 51
P R ASP P SP+ K + PK RS +S L +H G+ S +
Sbjct: 610 PKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRS 669
Query: 52 CADP----------PGPQPRQP-LHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPE 100
+ P P+PR P P + R + PQR +R S +PE
Sbjct: 670 TREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPE 729
Query: 101 PPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDS 151
P ++ P + + +P A++ PA P+ S S
Sbjct: 730 PKKIK---KAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPS 777
Score = 27.3 bits (59), Expect = 9.0
Identities = 34/130 (26%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 28 SPKVRSK--SWQLRLQHLPGAGTSHTCADP-PGPQPRQPLHGEPAGLWRPLGTPPQRSPQ 84
SP+ R K S + R + P + P P P PR+ P R PP+R
Sbjct: 532 SPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSP 591
Query: 85 SGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPAS 144
S + S SP PP R + + P AS P P + P + +S
Sbjct: 592 SPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP-----PKRRVSHSPPPKQRSS 646
Query: 145 SASAHDSPRL 154
+ SP L
Sbjct: 647 PVTKRRSPSL 656
>gi|239754458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 180
Score = 37.4 bits (85), Expect = 0.009
Identities = 34/117 (29%), Positives = 43/117 (36%), Gaps = 7/117 (5%)
Query: 27 ISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPRQPLHGEPAGLWR--PLGTPPQRSPQ 84
+SP R+ + Q PGA + P PR L P WR PLG P Q
Sbjct: 31 LSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQDRAP 90
Query: 85 SGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAE 141
S + +P PP RCS RP T S P H + + RP +
Sbjct: 91 SAHVPGSASRPTATPAPP--RCSR---RPPTTTVSRVAPSPGRPAGLHRSREPRPQD 142
>gi|239749008 PREDICTED: hypothetical protein XP_002346879 [Homo
sapiens]
Length = 180
Score = 37.4 bits (85), Expect = 0.009
Identities = 34/117 (29%), Positives = 43/117 (36%), Gaps = 7/117 (5%)
Query: 27 ISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPRQPLHGEPAGLWR--PLGTPPQRSPQ 84
+SP R+ + Q PGA + P PR L P WR PLG P Q
Sbjct: 31 LSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQDRAP 90
Query: 85 SGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAE 141
S + +P PP RCS RP T S P H + + RP +
Sbjct: 91 SAHVPGSASRPTATPAPP--RCSR---RPPTTTVSRVAPSPGRPAGLHRSREPRPQD 142
>gi|239743028 PREDICTED: hypothetical protein XP_002342721 [Homo
sapiens]
Length = 180
Score = 37.4 bits (85), Expect = 0.009
Identities = 34/117 (29%), Positives = 43/117 (36%), Gaps = 7/117 (5%)
Query: 27 ISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPRQPLHGEPAGLWR--PLGTPPQRSPQ 84
+SP R+ + Q PGA + P PR L P WR PLG P Q
Sbjct: 31 LSPSPRAAALPPLQQRPPGAPGALGRPKPVSRGPRAGLREWPQQPWRPGPLGAPLQDRAP 90
Query: 85 SGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAE 141
S + +P PP RCS RP T S P H + + RP +
Sbjct: 91 SAHVPGSASRPTATPAPP--RCSR---RPPTTTVSRVAPSPGRPAGLHRSREPRPQD 142
>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 37.0 bits (84), Expect = 0.011
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 32 RSKSWQLRLQHLPGAGTSHTCADP--PGPQPRQPLHGEPAGLWRP----LGTPPQRSPQS 85
++K+WQ + Q A HT PGP+PR P G + P P+R P+
Sbjct: 141 KTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPER 200
Query: 86 GQGVSRVRASSGSPE-----PPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQ 137
SRV +S+ + + P R A R AH R ++ +P P + Q
Sbjct: 201 TDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRR--RERRKPRPRSESSQ 255
>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 37.0 bits (84), Expect = 0.011
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 13/117 (11%)
Query: 32 RSKSWQLRLQHLPGAGTSHTCADP--PGPQPRQPLHGEPAGLWRP----LGTPPQRSPQS 85
++K+WQ + Q A HT PGP+PR P G + P P+R P+
Sbjct: 141 KTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPER 200
Query: 86 GQGVSRVRASSGSPE-----PPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQ 137
SRV +S+ + + P R A R AH R ++ +P P + Q
Sbjct: 201 TDDRSRVESSARAGDQRRGREPTSRDHRAATRRAAHGPFRR--RERRKPRPRSESSQ 255
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 37.0 bits (84), Expect = 0.011
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 16/107 (14%)
Query: 60 PRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRP----EA 115
P + G+P P PP++ P G G A G P L C+ G P +A
Sbjct: 2227 PEERARGDPDSSVEPAPVPPEQRPL-GSGDQGAEAE-GPPAASL--CAPDGPAPNTVAQA 2282
Query: 116 HTASARHPQDDLEPN--------PHGTAQQRPAEPASSASAHDSPRL 154
A P+DD E + P G Q AEP +A A +PR+
Sbjct: 2283 QAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRV 2329
>gi|123173757 RAVER1 [Homo sapiens]
Length = 756
Score = 37.0 bits (84), Expect = 0.011
Identities = 49/170 (28%), Positives = 59/170 (34%), Gaps = 21/170 (12%)
Query: 23 LPRLISPKVRSKSWQLRLQ----HLPGA-GTSHTCADPPGPQPRQPLHGE-PAGLWRPLG 76
+P L P + + QL LQ PG G S A PG QP PL GE PAG P
Sbjct: 385 MPLLNGPALSTALLQLALQTQGQKKPGILGDSPLGALQPGAQPANPLLGELPAGGGLPPE 444
Query: 77 TPPQRSPQSGQGVSRVRASSGSPE-----PPLVRCSHAGLRPEAHTASARHPQDDLEPNP 131
PP+R S + + G E PP + + + R Q D P P
Sbjct: 445 LPPRRGKPPPLLPSVLGPAGGDREALGLGPPAAQLTPPPAPVGLRGSGLRGLQKDSGPLP 504
Query: 132 HGTAQQRPAEPASSASAHDSPRL----------LRDGRTRGWAGIAGSRR 171
EP +P L L RGW G SRR
Sbjct: 505 TPPGVSLLGEPPKDYRIPLNPYLNLHSLLPASNLAGKEARGWGGAGRSRR 554
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 37.0 bits (84), Expect = 0.011
Identities = 38/160 (23%), Positives = 54/160 (33%), Gaps = 17/160 (10%)
Query: 2 PARAQASPV---FPVSPASVLKLVLPRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGP 58
P +A+A+P P SP+ P P + P + PP
Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGG---------PATPSPKWAPTPPAA 968
Query: 59 QPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEA--H 116
P P G + TPP +P S +G + G+P PP V P A
Sbjct: 969 TPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPF 1028
Query: 117 TASARHPQDDLEPNPHGTAQQRP---AEPASSASAHDSPR 153
A P P+P G+ P P + A+ SP+
Sbjct: 1029 PKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPK 1068
Score = 30.8 bits (68), Expect = 0.81
Identities = 34/127 (26%), Positives = 45/127 (35%), Gaps = 14/127 (11%)
Query: 51 TCADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAG 110
T P G P G P TPP +P S +G G+P PP V
Sbjct: 1293 TPPSPKGGPATSPPKGAP--------TPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK 1344
Query: 111 LRPEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDGRTRGWA--GIAG 168
P T A P P ++++ P PA++ S P + RG A G
Sbjct: 1345 GTP---TLPATTPSSKGGPTT-PSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKG 1400
Query: 169 SRRAPAV 175
+PAV
Sbjct: 1401 DPTSPAV 1407
Score = 30.4 bits (67), Expect = 1.1
Identities = 28/107 (26%), Positives = 38/107 (35%), Gaps = 13/107 (12%)
Query: 51 TCADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVR--CSH 108
T P G L G P TPP +P S +G + G+P PP
Sbjct: 1063 TLPSPKGGPATPSLKGAP--------TPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK 1114
Query: 109 AGLRPEAHTASARHPQDDLEPNPHGTAQQRPAE--PASSASAHDSPR 153
GL H + P P+P G P + P + A+ SP+
Sbjct: 1115 GGLATPPHKGAPTTPA-ATPPSPKGGLATPPPKGAPTTPAATPPSPK 1160
Score = 27.7 bits (60), Expect = 6.9
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
Query: 44 PGAGTSHTCADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPL 103
P + A PP P+ P P G TPP +P S +G G+P P +
Sbjct: 1237 PKGAPTTPAATPPSPKGG-PATPPPKGA----PTPPAATPPSLKGGLATPPHKGAPNPAV 1291
Query: 104 VR-CSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSP 152
V S G + A P P+P G+ P + A + A P
Sbjct: 1292 VTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPP 1341
Score = 27.3 bits (59), Expect = 9.0
Identities = 28/111 (25%), Positives = 37/111 (33%), Gaps = 8/111 (7%)
Query: 44 PGAGTSHTCADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPL 103
P + A PP P+ P TPP SP+ G + G+P PP
Sbjct: 1214 PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP--SPKGGPATPPPK---GAPTPPA 1268
Query: 104 VR--CSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSP 152
GL H A +P P+P G P + A + A P
Sbjct: 1269 ATPPSLKGGLATPPH-KGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPP 1318
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 36.6 bits (83), Expect = 0.015
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 44 PGAGTSHTCADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPL 103
P GT + ++ PGP P P EPA P TP R P G + S +P P
Sbjct: 510 PKEGTPGSPSETPGPSPAGPAGDEPAE--SPSETPGPR-PAGPAGDEPAESPSETPGPR- 565
Query: 104 VRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPAS 144
AG P A P + P+P G + PAE S
Sbjct: 566 -PAGPAGDEP------AESPSETPGPSPAGPTRDEPAESPS 599
Score = 35.0 bits (79), Expect = 0.043
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 53 ADPPGPQPRQPLHGEPAGLWRPLGTPPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLR 112
++ PGP P P EPA P TP R P G + S +P P AG
Sbjct: 579 SETPGPSPAGPTRDEPAE--SPSETPGPR-PAGPAGDEPAESPSETPGPR--PAGPAGDE 633
Query: 113 PEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDS 151
P A P + P+P G + PA+ +A D+
Sbjct: 634 P------AESPSETPGPSPAGPTRDEPAKAGEAAELQDA 666
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 36.6 bits (83), Expect = 0.015
Identities = 37/136 (27%), Positives = 50/136 (36%), Gaps = 21/136 (15%)
Query: 24 PRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPRQPLH-GEPAGLWRPLGT----- 77
P +SPK ++S P T HT PPG QP P P L
Sbjct: 663 PPSLSPKPPTRS--------PSPPTQHT-GQPPG-QPSAPSQLSAPRRYSSSLSPIQAPN 712
Query: 78 -PPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQ 136
PP + P + + +S P P+ S GL +HT PQ P+ +
Sbjct: 713 HPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTP----PQTPTPPSTPPLGK 768
Query: 137 QRPAEPASSASAHDSP 152
Q P+ PA A +P
Sbjct: 769 QNPSLPAPQTLAGGNP 784
Score = 28.1 bits (61), Expect = 5.2
Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 2/123 (1%)
Query: 41 QHLPGAGTSHTCADPPGPQPRQPLHG--EPAGLWRPLGTPPQRSPQSGQGVSRVRASSGS 98
Q P T PP P HG +P+ TPP P Q S + +
Sbjct: 721 QATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLA 780
Query: 99 PEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDG 158
P HAG P + + P P + + + +A + +++ D
Sbjct: 781 GGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAPTASKIVTDS 840
Query: 159 RTR 161
+R
Sbjct: 841 NSR 843
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 36.6 bits (83), Expect = 0.015
Identities = 37/136 (27%), Positives = 50/136 (36%), Gaps = 21/136 (15%)
Query: 24 PRLISPKVRSKSWQLRLQHLPGAGTSHTCADPPGPQPRQPLH-GEPAGLWRPLGT----- 77
P +SPK ++S P T HT PPG QP P P L
Sbjct: 585 PPSLSPKPPTRS--------PSPPTQHT-GQPPG-QPSAPSQLSAPRRYSSSLSPIQAPN 634
Query: 78 -PPQRSPQSGQGVSRVRASSGSPEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQ 136
PP + P + + +S P P+ S GL +HT PQ P+ +
Sbjct: 635 HPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTP----PQTPTPPSTPPLGK 690
Query: 137 QRPAEPASSASAHDSP 152
Q P+ PA A +P
Sbjct: 691 QNPSLPAPQTLAGGNP 706
Score = 28.1 bits (61), Expect = 5.2
Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 2/123 (1%)
Query: 41 QHLPGAGTSHTCADPPGPQPRQPLHG--EPAGLWRPLGTPPQRSPQSGQGVSRVRASSGS 98
Q P T PP P HG +P+ TPP P Q S + +
Sbjct: 643 QATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLA 702
Query: 99 PEPPLVRCSHAGLRPEAHTASARHPQDDLEPNPHGTAQQRPAEPASSASAHDSPRLLRDG 158
P HAG P + + P P + + + +A + +++ D
Sbjct: 703 GGNPETAQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAPTASKIVTDS 762
Query: 159 RTR 161
+R
Sbjct: 763 NSR 765
>gi|239751080 PREDICTED: hypothetical protein XP_002347700 [Homo
sapiens]
Length = 330
Score = 36.2 bits (82), Expect = 0.019
Identities = 29/95 (30%), Positives = 34/95 (35%), Gaps = 31/95 (32%)
Query: 23 LPRLISPKVRSKSWQLRLQHLPGAG------------------TSHTCADPPGPQPRQPL 64
LPR SP++R W LQ G G T PP PQPR P+
Sbjct: 219 LPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPR-PV 277
Query: 65 HGEPAGLWRPLGTP------------PQRSPQSGQ 87
G+P L P+ P P R P GQ
Sbjct: 278 RGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQ 312
>gi|239745567 PREDICTED: hypothetical protein XP_002344149 [Homo
sapiens]
Length = 330
Score = 36.2 bits (82), Expect = 0.019
Identities = 29/95 (30%), Positives = 34/95 (35%), Gaps = 31/95 (32%)
Query: 23 LPRLISPKVRSKSWQLRLQHLPGAG------------------TSHTCADPPGPQPRQPL 64
LPR SP++R W LQ G G T PP PQPR P+
Sbjct: 219 LPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPR-PV 277
Query: 65 HGEPAGLWRPLGTP------------PQRSPQSGQ 87
G+P L P+ P P R P GQ
Sbjct: 278 RGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQ 312
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,850,589
Number of Sequences: 37866
Number of extensions: 717963
Number of successful extensions: 4815
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 597
Number of HSP's that attempted gapping in prelim test: 3955
Number of HSP's gapped (non-prelim): 1358
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.