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Search of human proteins with 239749885
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749885 PREDICTED: hypothetical protein XP_002347195 [Homo
sapiens]
(104 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755429 PREDICTED: hypothetical protein [Homo sapiens] 227 2e-60
gi|239749885 PREDICTED: hypothetical protein XP_002347195 [Homo ... 227 2e-60
gi|239744187 PREDICTED: hypothetical protein XP_002343051 [Homo ... 227 2e-60
gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens] 41 2e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.004
gi|166795252 hypothetical protein LOC23359 [Homo sapiens] 35 0.010
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 35 0.017
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 35 0.017
gi|5032105 small optic lobes [Homo sapiens] 35 0.017
gi|169183864 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|239752818 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|169179784 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|169180175 PREDICTED: hypothetical protein [Homo sapiens] 34 0.022
gi|4507103 small nuclear RNA activating complex, polypeptide 2, ... 34 0.028
gi|33186895 selenoprotein V [Homo sapiens] 33 0.037
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 33 0.063
gi|89941470 ankyrin repeat domain 34 [Homo sapiens] 32 0.11
gi|68800350 interleukin-1 receptor-associated kinase 1 isoform 3... 32 0.14
gi|68800343 interleukin-1 receptor-associated kinase 1 isoform 2... 32 0.14
gi|68800243 interleukin-1 receptor-associated kinase 1 isoform 1... 32 0.14
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 32 0.14
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 32 0.14
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 32 0.14
gi|116284392 mucin 2 precursor [Homo sapiens] 32 0.14
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 32 0.14
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 32 0.14
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom... 32 0.14
gi|205277423 immunoglobulin superfamily, member 9 isoform b [Hom... 32 0.14
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 32 0.14
gi|55741655 anoctamin 8 [Homo sapiens] 31 0.18
>gi|239755429 PREDICTED: hypothetical protein [Homo sapiens]
Length = 104
Score = 227 bits (578), Expect = 2e-60
Identities = 104/104 (100%), Positives = 104/104 (100%)
Query: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG 60
MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG
Sbjct: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG 60
Query: 61 NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW 104
NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW
Sbjct: 61 NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW 104
>gi|239749885 PREDICTED: hypothetical protein XP_002347195 [Homo
sapiens]
Length = 104
Score = 227 bits (578), Expect = 2e-60
Identities = 104/104 (100%), Positives = 104/104 (100%)
Query: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG 60
MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG
Sbjct: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG 60
Query: 61 NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW 104
NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW
Sbjct: 61 NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW 104
>gi|239744187 PREDICTED: hypothetical protein XP_002343051 [Homo
sapiens]
Length = 104
Score = 227 bits (578), Expect = 2e-60
Identities = 104/104 (100%), Positives = 104/104 (100%)
Query: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG 60
MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG
Sbjct: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG 60
Query: 61 NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW 104
NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW
Sbjct: 61 NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRGTWW 104
>gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]
Length = 1024
Score = 41.2 bits (95), Expect = 2e-04
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 15 PLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGN-----TVRHAAPS 69
P P W GP+P S S+ + +LLR PG + LG T PS
Sbjct: 19 PRCPRRWLPEGPVPQSPPASMYGSTG---SLLRRVAGPGPRGRELGRVTAPCTPLRGPPS 75
Query: 70 PRWSPTPWWPVCTPRSPRPGPRPSRAVMQ 98
PR +P+PW P P PG + S + +
Sbjct: 76 PRVAPSPWAPSSPTGQPPPGAQSSVVIFR 104
Score = 25.8 bits (55), Expect = 7.7
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Query: 4 SPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG--- 60
S G + P P PP + +G + G + + LR R D+ ++L
Sbjct: 251 SSGAKPPEQAPPSPPGVGSRQGSGVAVGRAAKYSETDLDTVPLRCYRET-DIDEVLAERE 309
Query: 61 --NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPS 93
++ + PS P +P P PGP PS
Sbjct: 310 EADSAIESQPSSEGPPGTAYPPAPRPGPLPGPHPS 344
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 36.6 bits (83), Expect = 0.004
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Query: 66 AAPSPRWSPTPWWPVCTPRSPRPGP 90
A PSP+W+PTP P TP SP+ GP
Sbjct: 955 ATPSPKWAPTP--PAATPPSPKGGP 977
Score = 35.0 bits (79), Expect = 0.013
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 18 PTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVRHAAPSPRWSPTPW 77
PT V P P G + A + AL + +P A+PSP+ +PTP
Sbjct: 886 PTPSVVNLPFPKEG--PATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTP- 942
Query: 78 WPVCTPRSPRPGP 90
P TP SP+ GP
Sbjct: 943 -PAATPPSPKGGP 954
Score = 32.3 bits (72), Expect = 0.082
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 14/85 (16%)
Query: 6 GLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVRH 65
GL P P+ PT+ P P GL + S A G +
Sbjct: 1185 GLATPSPKGA--PTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGL---------- 1232
Query: 66 AAPSPRWSPTPWWPVCTPRSPRPGP 90
A PSP+ +PT P TP SP+ GP
Sbjct: 1233 ATPSPKGAPTT--PAATPPSPKGGP 1255
Score = 31.6 bits (70), Expect = 0.14
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 66 AAPSPRWSPTPWWPVCTPRSPRPGP 90
A PSP+ +PTP P TP SP+ GP
Sbjct: 978 ATPSPKGAPTP--PAATPPSPKGGP 1000
Score = 30.0 bits (66), Expect = 0.41
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 20/92 (21%)
Query: 12 PRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVRHA----- 66
P++ L P + TV P + + + A A + + +P VT +T + A
Sbjct: 1544 PKEALIPPAMTVPSPKKTPAIPTPKEAPATPSS--KEASSPPAVTP---STYKGAPSPKE 1598
Query: 67 --------APSPRWSPTPWWPVCTPRSPRPGP 90
+PSP+ +PTP P TP SP GP
Sbjct: 1599 LLIPPAVTSPSPKEAPTP--PAVTPPSPEKGP 1628
Score = 28.9 bits (63), Expect = 0.91
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 66 AAPSPRWSPTPWWPVCTPRSPRPGP 90
A PSP+ +PTP P TP SP+ P
Sbjct: 1001 ATPSPKGAPTP--PAVTPPSPKGSP 1023
Score = 27.7 bits (60), Expect = 2.0
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 66 AAPSPRWSPTPWWPVCTPRSPRPGP 90
A PS + +PTP P TP SP+ GP
Sbjct: 1072 ATPSLKGAPTP--PAATPPSPKGGP 1094
Score = 25.8 bits (55), Expect = 7.7
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 2 AVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRR--TPGDVTQI- 58
A++P + P P P T +P S + +T R A S+ TP VT +
Sbjct: 1383 AMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVS 1442
Query: 59 LGNTVRHAAP-----SPRWSPTPWWPVCTPRSPRPGPRPSR 94
L +AP +P P P TP SP+ P P +
Sbjct: 1443 LKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQ 1483
>gi|166795252 hypothetical protein LOC23359 [Homo sapiens]
Length = 539
Score = 35.4 bits (80), Expect = 0.010
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
Query: 4 SPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQ------ALLRSRRTPGDVTQ 57
SPGL P LPP V G P+S +TS+ A + S P D T
Sbjct: 285 SPGLLYPAE---LPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTS 341
Query: 58 ILGNTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPSRAVMQDRG 101
+L V +P SP+P PV P P P +D G
Sbjct: 342 LL---VSEGTATPGSSPSPDGPVGAPAPSEPALPPGHVSPEDPG 382
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 34.7 bits (78), Expect = 0.017
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 2 AVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQAL---LRSRRTPGDVTQI 58
A + G P P P S + PSS ++ +TA + Q + +TP +
Sbjct: 253 AQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSV 312
Query: 59 LGNTVRHAAPSPRWSPTPWWP-----VCTPRSPRPGPRPSRAV 96
TV + P+P +P P P P P+P+ A+
Sbjct: 313 ATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAI 355
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 34.7 bits (78), Expect = 0.017
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 8/103 (7%)
Query: 2 AVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQAL---LRSRRTPGDVTQI 58
A + G P P P S + PSS ++ +TA + Q + +TP +
Sbjct: 253 AQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSV 312
Query: 59 LGNTVRHAAPSPRWSPTPWWP-----VCTPRSPRPGPRPSRAV 96
TV + P+P +P P P P P+P+ A+
Sbjct: 313 ATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAI 355
>gi|5032105 small optic lobes [Homo sapiens]
Length = 1086
Score = 34.7 bits (78), Expect = 0.017
Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 20/111 (18%)
Query: 3 VSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAA----ARGQALLRSRRTPG----- 53
V P L+ P+P P S RG SG S A + ++L T G
Sbjct: 251 VPPQLQPPVPEAAQPSPSAGCRGAPQGSGWAGASRLAELLSGKRLSVLEEEATEGGTSRV 310
Query: 54 ---------DVTQILGNTVRHAAPSPRWSPTPWWPV--CTPRSPRPGPRPS 93
D+ + G+TVR+ SP W CT R+P PR S
Sbjct: 311 EAGSSTSGSDIIDLAGDTVRYTPASPSSPDFTTWSCAKCTLRNPTVAPRCS 361
>gi|169183864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 134
Score = 34.3 bits (77), Expect = 0.022
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 19/103 (18%)
Query: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVST----AAARGQALLRSRRTPGDVT 56
+A PG R+ R P S T RGP PS+ T ST A+ + R R T GDVT
Sbjct: 25 VARQPGRRKDCAR-VYPGRSCTPRGPAPSAAGTGASTWPRGCPAQAHSQGRIRPTAGDVT 83
Query: 57 QI-----------LGNTVRHAAPSPRWSPTPWWPVCTPRSPRP 88
+ + +++ SP P + C P SP P
Sbjct: 84 ALQDAVGCSDLTAVEGSIQCETGSPECCP---FSSCAPASPSP 123
>gi|239752818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 34.3 bits (77), Expect = 0.022
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 14/86 (16%)
Query: 15 PLPPTSWTV-------RGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILG------N 61
PLPPT V RGPLP T +++ A RGQ ++P ++ G
Sbjct: 50 PLPPTDCVVLSQTYWSRGPLPPQRSTPMASPARRGQFPACYAKSPSAAPRLGGFFRKRLG 109
Query: 62 TVRHAAPSPRWSPTPWWPVCTPRSPR 87
A P P W TPRSPR
Sbjct: 110 GSEEAEDGPESRSAPPWS-HTPRSPR 134
>gi|169179784 PREDICTED: hypothetical protein [Homo sapiens]
Length = 134
Score = 34.3 bits (77), Expect = 0.022
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 19/103 (18%)
Query: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVST----AAARGQALLRSRRTPGDVT 56
+A PG R+ R P S T RGP PS+ T ST A+ + R R T GDVT
Sbjct: 25 VARQPGRRKDCAR-VYPGRSCTPRGPAPSAAGTGASTWPRGCPAQAHSQGRIRPTAGDVT 83
Query: 57 QI-----------LGNTVRHAAPSPRWSPTPWWPVCTPRSPRP 88
+ + +++ SP P + C P SP P
Sbjct: 84 ALQDAVGCSDLTAVEGSIQCETGSPECCP---FSSCAPASPSP 123
>gi|169180175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 134
Score = 34.3 bits (77), Expect = 0.022
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 19/103 (18%)
Query: 1 MAVSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVST----AAARGQALLRSRRTPGDVT 56
+A PG R+ R P S T RGP PS+ T ST A+ + R R T GDVT
Sbjct: 25 VARQPGRRKDCAR-VYPGRSCTPRGPAPSAAGTGASTWPRGCPAQAHSQGRIRPTAGDVT 83
Query: 57 QI-----------LGNTVRHAAPSPRWSPTPWWPVCTPRSPRP 88
+ + +++ SP P + C P SP P
Sbjct: 84 ALQDAVGCSDLTAVEGSIQCETGSPECCP---FSSCAPASPSP 123
>gi|4507103 small nuclear RNA activating complex, polypeptide 2,
45kDa [Homo sapiens]
Length = 334
Score = 33.9 bits (76), Expect = 0.028
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 6 GLREPLPRDPLPPTS---WT-----VRGPLPSSGLTSVST----AAARGQALLRSRRTPG 53
GL+ P R+ PP WT + GPL + + S AA LL S+ P
Sbjct: 85 GLQGPRRREAQPPAPIEVWTDLAEKITGPLEEALAVAFSQVLTIAATEPVTLLHSK--PP 142
Query: 54 DVTQILGNTVRHAAPSPRWSPTPWWPVCTPRSPRPGPR 91
TQ G + +AP + P P P P +P PR
Sbjct: 143 KPTQARGKPLLLSAPGGQEDPAPEIPSSAPAAPSSAPR 180
>gi|33186895 selenoprotein V [Homo sapiens]
Length = 346
Score = 33.5 bits (75), Expect = 0.037
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Query: 8 REPLP-RDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDV-----TQILGN 61
R P P R P P VR P LT V T + G + L P + T L
Sbjct: 26 RTPTPLRTPTP-----VRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQIPTLVPTPALAR 80
Query: 62 TVRHAAP-SPRWSPTPWWPVCTPRSPRPGPRPSRAV 96
R P +P W PTP R+P P P P+R +
Sbjct: 81 IPRLVPPPAPAWIPTPVPTPVPVRNPTPVPTPARTL 116
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 32.7 bits (73), Expect = 0.063
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 13 RDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVRHAAPSPRW 72
R P P P P S S+ + G +++ P + V+ +PS W
Sbjct: 726 RTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSP-----VQSQSPSTNW 780
Query: 73 SPTPWWPVCTPRSPRPGPRPSRAVMQDRG 101
SP PV +SP P P P R Q+ G
Sbjct: 781 SPAV--PVKKAKSPTPSPSPPRNSDQEGG 807
Score = 27.3 bits (59), Expect = 2.6
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 4 SPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVS-TAAARGQALLRSR---RTPGDVTQIL 59
SP R P R P PP R P+ +S S + ++ + RSR + P T
Sbjct: 322 SPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP 381
Query: 60 GNTVRHAAPS---PRWSPTPWWPVCTPRSPRPGPRPSRA 95
R +PS PR P P P R P P ++
Sbjct: 382 PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS 420
>gi|89941470 ankyrin repeat domain 34 [Homo sapiens]
Length = 496
Score = 32.0 bits (71), Expect = 0.11
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
Query: 4 SPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTV 63
SPG+ +P P P P G S + TA G+ +L R + + +
Sbjct: 165 SPGVEDPAPASPSP-------GFCTSPSEIQLQTAGGGGRGMLSPRAQEEEEKR---DVF 214
Query: 64 RHAAPSPRWSPTPWWPVCTPRSPRPGPRP 92
P P P+P P+ P+ PR P+P
Sbjct: 215 EFPLPKPPDDPSPSEPL--PKPPRHPPKP 241
>gi|68800350 interleukin-1 receptor-associated kinase 1 isoform 3
[Homo sapiens]
Length = 633
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 19 TSWTVRGPLPSSGLTSVSTAAARGQALLRS---RRTPGDVTQILG----NTVRHAAPSPR 71
T+W PLPS G T+ ++ A + R+ P + L + H+ P
Sbjct: 100 TAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHSGPELG 159
Query: 72 WSPTP--WW---PVCTPRSPRPGPRPSRAVMQ 98
P+P W P P S +PGP S +++Q
Sbjct: 160 LVPSPASLWPPPPSPAPSSTKPGPESSVSLLQ 191
>gi|68800343 interleukin-1 receptor-associated kinase 1 isoform 2
[Homo sapiens]
Length = 682
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 19 TSWTVRGPLPSSGLTSVSTAAARGQALLRS---RRTPGDVTQILG----NTVRHAAPSPR 71
T+W PLPS G T+ ++ A + R+ P + L + H+ P
Sbjct: 100 TAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHSGPELG 159
Query: 72 WSPTP--WW---PVCTPRSPRPGPRPSRAVMQ 98
P+P W P P S +PGP S +++Q
Sbjct: 160 LVPSPASLWPPPPSPAPSSTKPGPESSVSLLQ 191
>gi|68800243 interleukin-1 receptor-associated kinase 1 isoform 1
[Homo sapiens]
Length = 712
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 19 TSWTVRGPLPSSGLTSVSTAAARGQALLRS---RRTPGDVTQILG----NTVRHAAPSPR 71
T+W PLPS G T+ ++ A + R+ P + L + H+ P
Sbjct: 100 TAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHSGPELG 159
Query: 72 WSPTP--WW---PVCTPRSPRPGPRPSRAVMQ 98
P+P W P P S +PGP S +++Q
Sbjct: 160 LVPSPASLWPPPPSPAPSSTKPGPESSVSLLQ 191
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/91 (25%), Positives = 30/91 (32%), Gaps = 8/91 (8%)
Query: 5 PGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVR 64
P + P P PP P P+ + AA A+L P V
Sbjct: 126 PSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVA 185
Query: 65 HAAPSPRWSPTPWWPVCTPRSPRPGPRPSRA 95
AP+P +P P +P P P P A
Sbjct: 186 APAPAPAPAPAP--------APAPAPAPDAA 208
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/91 (25%), Positives = 30/91 (32%), Gaps = 8/91 (8%)
Query: 5 PGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVR 64
P + P P PP P P+ + AA A+L P V
Sbjct: 126 PSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVA 185
Query: 65 HAAPSPRWSPTPWWPVCTPRSPRPGPRPSRA 95
AP+P +P P +P P P P A
Sbjct: 186 APAPAPAPAPAP--------APAPAPAPDAA 208
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/91 (25%), Positives = 30/91 (32%), Gaps = 8/91 (8%)
Query: 5 PGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVR 64
P + P P PP P P+ + AA A+L P V
Sbjct: 137 PSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVA 196
Query: 65 HAAPSPRWSPTPWWPVCTPRSPRPGPRPSRA 95
AP+P +P P +P P P P A
Sbjct: 197 APAPAPAPAPAP--------APAPAPAPDAA 219
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 68 PSPRWS-PTPWWPVCTPRSPRPGPRPSRA-----VMQDRGTWW 104
P+P S PTP P TP P PG +P Q+ TWW
Sbjct: 4384 PTPSKSTPTPSKPSSTPSKPTPGTKPPECPDFDPPRQENETWW 4426
Score = 28.9 bits (63), Expect = 0.91
Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 10 PLPRDPLPPTSWTVRGP---LPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVRHA 66
P P PPT+ T P PS T+ T L TP
Sbjct: 1597 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPT-STTTLPPTTTPSPPPTTTTTPPPTT 1655
Query: 67 APSPRWSPTPWWPVCTPRSPRPGPRPSRAV 96
PSP + TP P+ T +P P PS +
Sbjct: 1656 TPSPPTTTTPSPPITTTTTPPPTTTPSSPI 1685
Score = 27.3 bits (59), Expect = 2.6
Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 4/87 (4%)
Query: 10 PLPRDPLPPTSWTVRGP---LPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVRHA 66
P P PPT+ T P PS T+ T L TP
Sbjct: 1518 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPT-STTTLPPTTTPSPPPTTTTTPPPTT 1576
Query: 67 APSPRWSPTPWWPVCTPRSPRPGPRPS 93
PSP + TP P T +P P PS
Sbjct: 1577 TPSPPTTTTPSPPTITTTTPPPTTTPS 1603
Score = 26.2 bits (56), Expect = 5.9
Identities = 23/91 (25%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 10 PLPRDPLPPTSWTVRGP---LPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVRHA 66
P P PP + T P PSS +T+ + + TP T
Sbjct: 1660 PTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTT------TMTTPSPTTTPSSPITTTT 1713
Query: 67 APSPRWSPTPWWPVCTPRSPRPGPRPSRAVM 97
PS +P+P T SP P P M
Sbjct: 1714 TPSSTTTPSPPPTTMTTPSPTTTPSPPTTTM 1744
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 68 PSPRWS-PTPWWPVCTPRSPRPGPRPSRA-----VMQDRGTWW 104
P+P S PTP P TP P PG +P Q+ TWW
Sbjct: 1844 PTPSKSTPTPSKPSSTPSKPTPGTKPPECPDFDPPRQENETWW 1886
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 31.6 bits (70), Expect = 0.14
Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 12/97 (12%)
Query: 9 EPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAAR----GQALLRSRRTPGDVTQILGNTVR 64
EP P P + + P P L SV A L TP VT++
Sbjct: 108 EPAPEPAPEPATESAPEPTPEPALESVPEPAPELTPEVAPELAPEPTPEPVTELAPEFCP 167
Query: 65 HAAPSPRWSPTPWWPVC--------TPRSPRPGPRPS 93
AAP R SP P C SP P P PS
Sbjct: 168 EAAPEFRPSPAPCLLQCPVDTRERGLKTSPSPSPSPS 204
>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
sapiens]
Length = 1179
Score = 31.6 bits (70), Expect = 0.14
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 21/99 (21%)
Query: 5 PGLREPLPRDPL--PPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNT 62
P R PLP +P+ P V GP T AA + R + P Q L +
Sbjct: 834 PSSRGPLPLEPICRGPDGRFVMGP----------TVAAPQERSGREQAEPRTPAQRLARS 883
Query: 63 VRHAAPSPRWSPTPWW---------PVCTPRSPRPGPRP 92
++ SP +P P P P SP PGP P
Sbjct: 884 FDCSSSSPSGAPQPLCIEDISPVAPPPAAPPSPLPGPGP 922
>gi|205277423 immunoglobulin superfamily, member 9 isoform b [Homo
sapiens]
Length = 1163
Score = 31.6 bits (70), Expect = 0.14
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 21/99 (21%)
Query: 5 PGLREPLPRDPL--PPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNT 62
P R PLP +P+ P V GP T AA + R + P Q L +
Sbjct: 818 PSSRGPLPLEPICRGPDGRFVMGP----------TVAAPQERSGREQAEPRTPAQRLARS 867
Query: 63 VRHAAPSPRWSPTPWW---------PVCTPRSPRPGPRP 92
++ SP +P P P P SP PGP P
Sbjct: 868 FDCSSSSPSGAPQPLCIEDISPVAPPPAAPPSPLPGPGP 906
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 31.6 bits (70), Expect = 0.14
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 3 VSPGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGD--VTQILG 60
++PG PLP P P T PLP +V+ A + S + T G
Sbjct: 1584 LTPGPPHPLPDTPAPAT------PLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQG 1637
Query: 61 NTVRHAAPSPRWSPTPWWPVCTPRSPRPGPRP 92
+ P P P P P P +P+PGP P
Sbjct: 1638 ASAAPGDPHPPGPPAPAAP--APAAPQPGPDP 1667
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 12 PRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVRHAAPSPR 71
P+ PLPP LP+ S + AAA G + + + G P R
Sbjct: 1945 PKPPLPP--------LPTGTGVSPTAAAAPGATSPSASSSSTSTRHLQGVEFEMRPPLLR 1996
Query: 72 WSPTPWWPVCTPRSPRPGPRPS 93
+P+P + P PRPS
Sbjct: 1997 RAPSPSLLPASEHKVSPAPRPS 2018
Score = 25.8 bits (55), Expect = 7.7
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 5 PGLREPLPRDPLPPTSWTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVTQILGNTVR 64
P + P ++ +P + ++ P SS S ++ + + T G G
Sbjct: 1142 PAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGG-----GGGGS 1196
Query: 65 HAAPSPRWSPTP--WWPVCTPRSP 86
+P+P SP P PV TP SP
Sbjct: 1197 SPSPAPAMSPVPPSPSPVPTPASP 1220
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 31.2 bits (69), Expect = 0.18
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 10 PLPRDPLPPTS-WTVRGPLPSSGLTSVSTAAARGQALLRSRRTPGDVT-------QILGN 61
PLPR P PP W GP G AA QAL + P + + G+
Sbjct: 1137 PLPRPPTPPAGCWQWDGPWGCGG-----EGAAPRQALAAAECPPCAMAGPPPAPQPLPGD 1191
Query: 62 TVRHAAPSPRWSPTPWWPVCTPRSPRPGPRPS 93
++ P P PT P+ TP +P P P PS
Sbjct: 1192 ASFYSLPPPPLPPTS-DPLETP-APSPSPSPS 1221
Score = 26.2 bits (56), Expect = 5.9
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 9/38 (23%)
Query: 1 MAVSPGLREPLPRD---------PLPPTSWTVRGPLPS 29
MA P +PLP D PLPPTS + P PS
Sbjct: 1178 MAGPPPAPQPLPGDASFYSLPPPPLPPTSDPLETPAPS 1215
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,079,455
Number of Sequences: 37866
Number of extensions: 372965
Number of successful extensions: 2553
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 2171
Number of HSP's gapped (non-prelim): 570
length of query: 104
length of database: 18,247,518
effective HSP length: 75
effective length of query: 29
effective length of database: 15,407,568
effective search space: 446819472
effective search space used: 446819472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.