Guide to the Human Genome
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Name: IRAK1 Sequence: fasta or formatted (633aa) NCBI GI: 68800350
Description:

interleukin-1 receptor-associated kinase 1 isoform 3

Referenced in:

MicroRNAs
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [712aa] interleukin-1 receptor-associated kinase 1 isoform 1
alt prot [682aa] interleukin-1 receptor-associated kinase 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         65           2
 C cysteine            2.1         13           1
 D aspartate           3.5         22           1
 E glutamate           6.0         38           2
 F phenylalanine       3.3         21           1
 G glycine             8.1         51           2
 H histidine           2.2         14           1
 I isoleucine          2.8         18           3
 K lysine              2.4         15           1
 L leucine            10.6         67           2
 M methionine          0.9          6           1
 N asparagine          1.9         12           1
 P proline            10.3         65           4
 Q glutamine           5.2         33           1
 R arginine            5.8         37           1
 S serine             10.7         68           4
 T threonine           4.6         29           2
 V valine              5.2         33           3
 W tryptophan          2.1         13           1
 Y tyrosine            2.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin-1 receptor-associated kinase 1 isoform 3... 
IRAK1                 0.941   interleukin-1 receptor-associated kinase 1 isoform 2...
IRAK1                 0.690   interleukin-1 receptor-associated kinase 1 isoform 1...
IRAK2                 0.148   interleukin-1 receptor-associated kinase 2 
IRAK3                 0.115   interleukin-1 receptor-associated kinase 3 isoform ...
IRAK4                 0.114   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK4                 0.114   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK3                 0.113   interleukin-1 receptor-associated kinase 3 isoform ...
IRAK4                 0.110   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK4                 0.110   interleukin-1 receptor-associated kinase 4 isoform ...
IRAK4                 0.110   interleukin-1 receptor-associated kinase 4 isoform ...
RIPK2                 0.058   receptor-interacting serine-threonine kinase 2 
KIAA1804              0.058   mixed lineage kinase 4 
RAF1                  0.055   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
TNNI3K                0.053   TNNI3 interacting kinase isoform b 
TNNI3K                0.053   TNNI3 interacting kinase isoform a 
MAP3K11               0.051   mitogen-activated protein kinase kinase kinase 11 [Ho...
ARAF                  0.050   v-raf murine sarcoma 3611 viral oncogene homolog [Hom...
MAP3K10               0.050   mitogen-activated protein kinase kinase kinase 10 [H...
MAP3K13               0.050   mitogen-activated protein kinase kinase kinase 13 [Ho...
TESK1                 0.049   testis-specific protein kinase 1 
RIPK3                 0.048   receptor-interacting serine-threonine kinase 3 [Homo...
BRAF                  0.048   B-Raf 
MAP3K9                0.048   mitogen-activated protein kinase kinase kinase 9 [Ho...
MAP3K12               0.046   mitogen-activated protein kinase kinase kinase 12 [H...
RIPK4                 0.045   ankyrin repeat domain 3 
ANKK1                 0.045   ankyrin repeat and kinase domain containing 1 
DDR1                  0.043   discoidin domain receptor family, member 1 isoform b...
CDK10                 0.041   cyclin-dependent kinase 10 isoform a 
MAP3K7                0.040   mitogen-activated protein kinase kinase kinase 7 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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