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Search of human proteins with 239749706
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749706 PREDICTED: hypothetical protein XP_002347125 [Homo
sapiens]
(215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749706 PREDICTED: hypothetical protein XP_002347125 [Homo ... 451 e-127
gi|46409646 hypothetical protein LOC401563 [Homo sapiens] 282 1e-76
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.003
gi|154816198 transcription elongation factor B polypeptide 3C-li... 39 0.003
gi|156938279 transcription elongation factor B polypeptide 3C [H... 39 0.003
gi|150170710 hypothetical protein LOC728118 [Homo sapiens] 38 0.006
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap... 37 0.010
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 37 0.010
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.013
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 37 0.017
gi|18677735 proline-rich coiled-coil 1 [Homo sapiens] 36 0.022
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 35 0.063
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 35 0.063
gi|18079216 CASK interacting protein 1 [Homo sapiens] 34 0.11
gi|41406097 dishevelled 3 [Homo sapiens] 34 0.11
gi|145309320 forkhead box Q1 [Homo sapiens] 33 0.14
gi|188536004 zinc finger protein 469 [Homo sapiens] 33 0.14
gi|50428940 mediator complex subunit 25 [Homo sapiens] 33 0.14
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 33 0.18
gi|239755891 PREDICTED: hypothetical protein [Homo sapiens] 33 0.18
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 33 0.18
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 33 0.18
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 33 0.18
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 33 0.18
gi|169172231 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 33 0.24
gi|169170975 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 33 0.24
gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens] 32 0.41
>gi|239749706 PREDICTED: hypothetical protein XP_002347125 [Homo
sapiens]
Length = 215
Score = 451 bits (1160), Expect = e-127
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MPGAAGLIHGTPLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRRQG 60
MPGAAGLIHGTPLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRRQG
Sbjct: 1 MPGAAGLIHGTPLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRRQG 60
Query: 61 APGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGS 120
APGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGS
Sbjct: 61 APGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGS 120
Query: 121 LATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCP 180
LATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCP
Sbjct: 121 LATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCP 180
Query: 181 EMGQNESLSEERKGHESKRKSGGRGSPSSHPTQAS 215
EMGQNESLSEERKGHESKRKSGGRGSPSSHPTQAS
Sbjct: 181 EMGQNESLSEERKGHESKRKSGGRGSPSSHPTQAS 215
>gi|46409646 hypothetical protein LOC401563 [Homo sapiens]
Length = 190
Score = 282 bits (722), Expect = 1e-76
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 81 QTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHSLLPPWVDLKE 140
QTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHSLLPPWVDLKE
Sbjct: 56 QTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHSLLPPWVDLKE 115
Query: 141 PPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQNESLSEERKGHESKRK 200
PPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQNESLSEERKGHESKRK
Sbjct: 116 PPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQNESLSEERKGHESKRK 175
Query: 201 SGGRGSPSSHPTQAS 215
SGGRGSPSSHPTQAS
Sbjct: 176 SGGRGSPSSHPTQAS 190
>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
Length = 878
Score = 40.4 bits (93), Expect = 0.001
Identities = 49/190 (25%), Positives = 65/190 (34%), Gaps = 49/190 (25%)
Query: 12 PLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEP---------PPRRPQRRQGAP 62
PL + Q + A RG DS+ + +G+G D +P PP+ R
Sbjct: 625 PLKEKQHSRAAPSRGTARLDSSSSKFAAGQGAERDVPDPQEGVGMETCPPQTTARDSQGR 684
Query: 63 GEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVC-------AA 115
G H G + + + L C+ P LR RP P P C A
Sbjct: 685 GRAHTGMARSEDSVVLL-------GCQDS---PGLRAARPTSPPQDHRPTCPGVGTKDAL 734
Query: 116 RLAG---------------------SLATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDP 154
L G SLA L H LLP W L + P P++ L E
Sbjct: 735 DLPGGSPVRESHGLAQGSSEEEELPSLAFLLGSQHKLLPWW--LPQSPVPASGLLSPEKW 792
Query: 155 GQGGCHGAQS 164
G G H + S
Sbjct: 793 GPQGTHQSPS 802
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 38.9 bits (89), Expect = 0.003
Identities = 43/141 (30%), Positives = 53/141 (37%), Gaps = 15/141 (10%)
Query: 11 TPLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRRQGAPGEPHLGFS 70
TPLS P R+ RG + H + GL PP P R+ AP LG
Sbjct: 238 TPLSS---PARSGPSARGTPRAPAHPS-QPKPKGLQALRPPQVTPPRKDAAPA---LG-- 288
Query: 71 LTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHS 130
P S TP S+ + P L+ L PA P A GS + S
Sbjct: 289 ---PLSSSPLATPSPSAPPSPSAPPSLQT---LPSPPATPPSQATTSLGSPTLQATHSFL 342
Query: 131 LLPPWVDLKEPPPPSAPSLLL 151
PP L PPP + P+L L
Sbjct: 343 PSPPLSPLATPPPQAPPALAL 363
Score = 27.7 bits (60), Expect = 7.7
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 20/101 (19%)
Query: 50 PPPRRP-QRRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPA 108
PPP P Q P P + S TPP Q P + V P + P+ P
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPP-----SQAPPSLAAPPLQVPPSPPASPPMSPSAT 457
Query: 109 ILPVCAARLAGSLATDLSRSHSLLPPWVDLKEPPPPSAPSL 149
P LA P + L +PPP + P+L
Sbjct: 458 PPPQAPPPLAA--------------PPLQLAKPPPQAPPAL 484
>gi|154816198 transcription elongation factor B polypeptide 3C-like
[Homo sapiens]
Length = 546
Score = 38.9 bits (89), Expect = 0.003
Identities = 51/190 (26%), Positives = 73/190 (38%), Gaps = 40/190 (21%)
Query: 41 RGTGLDTTEPPPRRPQRRQGAP---GEPHLGF----------SLTPPHLFSLKQTPGGSS 87
R TG D +P ++R G E GF S +P H + ++TP G
Sbjct: 81 RNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQ 140
Query: 88 C---RKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHSLLPPWVDLKEPPPP 144
R + PR RP + A +G +R+ L P E P P
Sbjct: 141 RPHPRSPSREPRAERKRPRM---------APADSGPHRDPPTRTAPLPMP-----EGPEP 186
Query: 145 SAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQNESLSEERKGHESKRKSGGR 204
+ P E PG+G H AQ G L G +G Q E++ KGH+S R + +
Sbjct: 187 AVPG---EQPGRGHAHAAQ---GGPLLGQGCQG----QPQGEAVGSHSKGHKSSRGASAQ 236
Query: 205 GSPSSHPTQA 214
SP +Q+
Sbjct: 237 KSPPVQESQS 246
>gi|156938279 transcription elongation factor B polypeptide 3C [Homo
sapiens]
Length = 546
Score = 38.9 bits (89), Expect = 0.003
Identities = 51/190 (26%), Positives = 73/190 (38%), Gaps = 40/190 (21%)
Query: 41 RGTGLDTTEPPPRRPQRRQGAP---GEPHLGF----------SLTPPHLFSLKQTPGGSS 87
R TG D +P ++R G E GF S +P H + ++TP G
Sbjct: 81 RNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPRSPSHSPEHRRTARRTPPGQQ 140
Query: 88 C---RKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHSLLPPWVDLKEPPPP 144
R + PR RP + A +G +R+ L P E P P
Sbjct: 141 RPHPRSPSREPRAERKRPRM---------APADSGPHRDPPTRTAPLPMP-----EGPEP 186
Query: 145 SAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQNESLSEERKGHESKRKSGGR 204
+ P E PG+G H AQ G L G +G Q E++ KGH+S R + +
Sbjct: 187 AVPG---EQPGRGHAHAAQ---GGPLLGQGCQG----QPQGEAVGSHSKGHKSSRGASAQ 236
Query: 205 GSPSSHPTQA 214
SP +Q+
Sbjct: 237 KSPPVQESQS 246
>gi|150170710 hypothetical protein LOC728118 [Homo sapiens]
Length = 878
Score = 38.1 bits (87), Expect = 0.006
Identities = 48/186 (25%), Positives = 62/186 (33%), Gaps = 49/186 (26%)
Query: 12 PLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEP---------PPRRPQRRQGAP 62
PL + Q + A RG DS+ + +G+G D P PP+ R
Sbjct: 625 PLKEKQHARAAPSRGTARLDSSSSKFAAGQGAERDVPVPQQGVGMETCPPQTTARDSQGR 684
Query: 63 GEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVC-------AA 115
G H G + + + L C+ P LR RP P P C A
Sbjct: 685 GRAHTGMARSKDSVVLL-------GCQDS---PGLRAARPTSPPQDHRPTCPGVGTKDAL 734
Query: 116 RLAG---------------------SLATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDP 154
L G SLA L H LLP W L + P P++ L E
Sbjct: 735 DLPGGSPVRESHGLAQGSSEEEELPSLAFLLGSQHKLLPWW--LPQSPVPASGLLSPEKW 792
Query: 155 GQGGCH 160
G G H
Sbjct: 793 GPQGTH 798
>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 878
Score = 37.4 bits (85), Expect = 0.010
Identities = 48/190 (25%), Positives = 64/190 (33%), Gaps = 49/190 (25%)
Query: 12 PLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEP---------PPRRPQRRQGAP 62
PL + Q + A RG DS+ + +G+G D +P PP+ R
Sbjct: 625 PLKEKQHARAAPSRGTARLDSSSSKFAAGQGAERDVPDPQQGVGMETCPPQMTARDSQGR 684
Query: 63 GEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVC-------AA 115
G H G + + + L C+ P LR P P P C A
Sbjct: 685 GRAHTGMARSEDSVVLL-------GCQDS---PGLRAAWPTSPPQDHRPTCPGVGTKDAL 734
Query: 116 RLAG---------------------SLATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDP 154
L G SLA L H LLP W L + P P++ L E
Sbjct: 735 DLPGGSPVRESHGLAQGSSEEEELPSLAFLLGSQHKLLPWW--LPQSPVPASGLLSPEKW 792
Query: 155 GQGGCHGAQS 164
G G H + S
Sbjct: 793 GPQGTHQSPS 802
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 37.4 bits (85), Expect = 0.010
Identities = 36/126 (28%), Positives = 45/126 (35%), Gaps = 29/126 (23%)
Query: 45 LDTTEPPPRRPQRRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVL---------- 94
L T PPP+R R G P + PP LF+ PG + L
Sbjct: 164 LPPTPPPPQRLFARPGFLPTPAAATAFCPPRLFA---RPGFLPPHRRGFLPLTAFYPPPP 220
Query: 95 PRLRVTRPLVPEP-------AILPVCAARLAGSLATDLSRSHSLLPPWV---------DL 138
PRL V P P LP AA A + + + + S PPW+ L
Sbjct: 221 PRLFVAAAFSPPPPWLSARRGFLPPAAAAAAAAFCSPTAAAFSPPPPWLFVAATFCSTRL 280
Query: 139 KEPPPP 144
PPPP
Sbjct: 281 FAPPPP 286
Score = 28.5 bits (62), Expect = 4.5
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 50 PPP---RRPQ----RRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLP-----RL 97
PPP RPQ RR+G +P + PPH + CR+ + P RL
Sbjct: 498 PPPWLFARPQLFIPRRRGFLLDP----AFCPPHRRGFFTPAAVAFCRRGFLPPPPPPPRL 553
Query: 98 RVTRPLVPEPAILPVCAARLAGSLATDLSRSHSLLPPWVDLKEPPPP 144
R + PA CA RL + +PP L PPPP
Sbjct: 554 FPRRGFL-SPAAAAFCAPRLFAPCRCGFFPTALFVPPPPRLFAPPPP 599
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 37.0 bits (84), Expect = 0.013
Identities = 48/161 (29%), Positives = 58/161 (36%), Gaps = 25/161 (15%)
Query: 11 TPLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRRQGAPGEPHLGFS 70
TPLS P R+ RG + H + GL PP P R+ AP L S
Sbjct: 247 TPLSS---PARSGPSARGTPRAPAHPS-QPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 302
Query: 71 --LTPPHLFSLKQ--------TPGGSS--CRKEAVLPRLRVTRPLVPE--------PAIL 110
TP +L+ TP SS C+ LP L P P PA
Sbjct: 303 PLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLP-LAPPSPSAPPSLQTLPSPPATP 361
Query: 111 PVCAARLAGSLATDLSRSHSLLPPWVDLKEPPPPSAPSLLL 151
P A GS + S PP L PPP + P+L L
Sbjct: 362 PSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALAL 402
Score = 27.7 bits (60), Expect = 7.7
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 20/101 (19%)
Query: 50 PPPRRP-QRRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPA 108
PPP P Q P P + S TPP Q P + V P + P+ P
Sbjct: 442 PPPSPPVQAPFSPPASPPVSPSATPP-----SQAPPSLAAPPLQVPPSPPASPPMSPSAT 496
Query: 109 ILPVCAARLAGSLATDLSRSHSLLPPWVDLKEPPPPSAPSL 149
P LA P + L +PPP + P+L
Sbjct: 497 PPPQAPPPLAA--------------PPLQLAKPPPQAPPAL 523
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 36.6 bits (83), Expect = 0.017
Identities = 42/196 (21%), Positives = 63/196 (32%), Gaps = 21/196 (10%)
Query: 19 PQRARCRGRGCRDSAEHRDVSGRGTGLDTTEPP------PRRPQRRQGAPGEPHLGFSLT 72
P A C D + GR T + ++ P P + +P P S
Sbjct: 272 PSPANCTTENSEDDKKR----GRSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGP 327
Query: 73 PPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHSLL 132
PP +L TPG + V P P A+ P + + + T + ++
Sbjct: 328 PPAASALSTTPGNNG-----------VPAPAAPPSALGPKASPAPSHNSGTPAPYAQAVA 376
Query: 133 PPWVDLKEPPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQNESLSEER 192
PP P PS+ G GG G S + A G G S+ +
Sbjct: 377 PPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGAGKQNGATSYSSVVADS 436
Query: 193 KGHESKRKSGGRGSPS 208
+ SGG + S
Sbjct: 437 PAEVALSSSGGNNASS 452
>gi|18677735 proline-rich coiled-coil 1 [Homo sapiens]
Length = 445
Score = 36.2 bits (82), Expect = 0.022
Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 16/151 (10%)
Query: 43 TGLDTTEP--PPRRPQ-----RRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLP 95
+G++TT P PP P P S + P++ S++ P + + LP
Sbjct: 5 SGIETTPPGTPPPNPAGLAATAMSSTPVPLAATSSFSSPNVSSMESFPPLAYSTPQPPLP 64
Query: 96 RLRVTRPL--VPEPAILPVCAARLAGSLATDLSRSHSLL---PPWVDLKEPPPPSAPSLL 150
+R + PL VP PA+ V L S+ +S S + PP PP SAP+ L
Sbjct: 65 PVRPSAPLPFVPPPAVPSV--PPLVTSMPPPVSPSTAAAFGNPPVSHF--PPSTSAPNTL 120
Query: 151 LEDPGQGGCHGAQSCVGTCELANGARGFCPE 181
L P G S T ++ G G P+
Sbjct: 121 LPAPPSGPPISGFSVGSTYDITRGHAGRAPQ 151
>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
Length = 374
Score = 34.7 bits (78), Expect = 0.063
Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 62 PGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAIL----PVCAARL 117
PG P LF+ P E VLP L + P P P +L A +
Sbjct: 66 PGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEEAPAPM 125
Query: 118 AGSLATDLSRSHSLLPPWVDLKEPPPPSAPS 148
SL DL + H L PP PPPP AP+
Sbjct: 126 GASLIADLEQLH-LSPP------PPPPQAPA 149
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 34.7 bits (78), Expect = 0.063
Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 62 PGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAIL----PVCAARL 117
PG P LF+ P E VLP L + P P P +L A +
Sbjct: 66 PGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSEEEAPAPM 125
Query: 118 AGSLATDLSRSHSLLPPWVDLKEPPPPSAPS 148
SL DL + H L PP PPPP AP+
Sbjct: 126 GASLIADLEQLH-LSPP------PPPPQAPA 149
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 33.9 bits (76), Expect = 0.11
Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 25/122 (20%)
Query: 49 EPPP-------------RRPQRRQGAPGE--PHLGFSLTPP----HLFSLKQTPGGS-SC 88
EPPP RRP Q P E P + PP HL L G +
Sbjct: 1162 EPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKP 1221
Query: 89 RKEAVLPRLRVTRPLVPEPAILPVCAAR---LAGSLATDLSRSHSLLPPWVDLKEPPPPS 145
K V P+ +T+P VP+ P ++ L G + ++ R+H PP V K PPPP+
Sbjct: 1222 AKPPVSPKPVLTQP-VPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPP-VSPKPPPPPT 1279
Query: 146 AP 147
AP
Sbjct: 1280 AP 1281
>gi|41406097 dishevelled 3 [Homo sapiens]
Length = 716
Score = 33.9 bits (76), Expect = 0.11
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 129 HSLLPPW---VDLKEPPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARGFCPEMGQN 185
H PW + PPPP + P G +G S + + + G+R G N
Sbjct: 526 HPGAAPWPMAFPYQYPPPPHPYNPHPGFPELGYSYGGGSA--SSQHSEGSRS----SGSN 579
Query: 186 ESLSEERKGHESKR---KSGGRGSPSSHPTQAS 215
S S+ RK + K KSGG GS S H T++S
Sbjct: 580 RSGSDRRKEKDPKAGDSKSGGSGSESDHTTRSS 612
>gi|145309320 forkhead box Q1 [Homo sapiens]
Length = 403
Score = 33.5 bits (75), Expect = 0.14
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 52 PRRPQRRQGAPGEPHLGFSLT-----PPHLFSLKQTPGGSSCRKEAV----LPRLRVTRP 102
P R + R G+ F++ P L+ T G++ + A LP P
Sbjct: 254 PARQEERASPAGKFSSSFAIDSILRKPFRSRRLRDTAPGTTLQWGAAPCPPLPAFPALLP 313
Query: 103 LVPEPAILPVCAARLAGSLATDLSRSHSLLPPWVD--LKEPPPPSAPSLLLEDPGQGGCH 160
P A+LP+CA AG A L + +PP L P P +AP+ L P GG H
Sbjct: 314 AAPCRALLPLCAYG-AGEPAR-LGAREAEVPPTAPPLLLAPLPAAAPAKPLRGPAAGGAH 371
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 33.5 bits (75), Expect = 0.14
Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 21/153 (13%)
Query: 12 PLSQLQRPQRARCRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRR-QGAPGEPHLGFS 70
PL+Q +P R + R S + R RG T+PPP + + APG PH
Sbjct: 2490 PLAQKCQPPRKKSH----RVSGKERPNHSRGDPSHVTQPPPAQGSKEVLRAPGSPH-SQQ 2544
Query: 71 LTPP----HLFSLK---QTPGGSSCRKEAVLPRLRVTR--------PLVPEPAILPVCAA 115
L PP H +K P R++ + P+ R P V P+ +
Sbjct: 2545 LHPPSPTEHEVDVKTPASKPRPDQAREDELHPKQAEKREGRRWRREPTVDSPSHSEGKSN 2604
Query: 116 RLAGSLATDLSRSHSLLPPWVDLKEPPPPSAPS 148
+ G L R S+LP D+ S PS
Sbjct: 2605 KKRGKLRGRRLREESILPVSADVISDGRGSRPS 2637
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 33.5 bits (75), Expect = 0.14
Identities = 42/157 (26%), Positives = 53/157 (33%), Gaps = 38/157 (24%)
Query: 47 TTEPPPRRPQRRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLR--VTRPLV 104
T +PPP PQ GA P PP Q PG + P+LR + P
Sbjct: 610 TAQPPPGAPQGPPGAASGP------PPPGPILRPQNPGAN--------PQLRSLLLNPPP 655
Query: 105 PEPAILPVCAARLAGSLATDLSRSHSLLPPWVDLKEPPPPS-------APSLLLEDPGQ- 156
P+ + P A+ H L PP PPP P LL P Q
Sbjct: 656 PQTGVPPPQAS------------LHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQS 703
Query: 157 --GGCHGAQSCVGTCELANGARGFCPEMGQNESLSEE 191
G L+ G RG P+ G S+ E+
Sbjct: 704 WPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMED 740
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 33.1 bits (74), Expect = 0.18
Identities = 46/186 (24%), Positives = 60/186 (32%), Gaps = 55/186 (29%)
Query: 55 PQRRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCA 114
P GAPGEP PP + PL P P P C
Sbjct: 791 PTLASGAPGEPQSKVPAAPP------------------------LGPPLQPPPTPDPTCR 826
Query: 115 ARLAGSL--ATDLSRSHSLLP--PWVDLKEP-PPPSAPSLLLEDPGQGGCHGAQSCVGTC 169
L A S S S P P + P P P+A ++ G+G TC
Sbjct: 827 EPAHSELLDAASSSSSSSCPPCSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTC 886
Query: 170 ELA--------------------NGARGFCPEMGQNESLSEERKGHESKRKSGGRG---- 205
++ G RG P + +S GH++KR +GGRG
Sbjct: 887 KVTVNSASQLQAHNTGAKHRWMMEGQRG-APRRSRGRPVSRGGAGHKAKRVTGGRGGRQG 945
Query: 206 -SPSSH 210
SP+ H
Sbjct: 946 PSPAFH 951
>gi|239755891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 246
Score = 33.1 bits (74), Expect = 0.18
Identities = 33/93 (35%), Positives = 39/93 (41%), Gaps = 17/93 (18%)
Query: 20 QRARCRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRRQGAP----GEPHLGFSLTPPH 75
+R RCRG G SA+ RG+ PRR R+Q A EP G SL P
Sbjct: 96 RRGRCRGIG--PSAQ----PSRGS------ETPRRGWRKQAATLGRGAEPRFGLSL-PRR 142
Query: 76 LFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPA 108
K P + R L L V+ PL P PA
Sbjct: 143 SELRKPRPSAAPRRTRPRLAALPVSAPLAPRPA 175
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 33.1 bits (74), Expect = 0.18
Identities = 46/186 (24%), Positives = 60/186 (32%), Gaps = 55/186 (29%)
Query: 55 PQRRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCA 114
P GAPGEP PP + PL P P P C
Sbjct: 791 PTLASGAPGEPQSKVPAAPP------------------------LGPPLQPPPTPDPTCR 826
Query: 115 ARLAGSL--ATDLSRSHSLLP--PWVDLKEP-PPPSAPSLLLEDPGQGGCHGAQSCVGTC 169
L A S S S P P + P P P+A ++ G+G TC
Sbjct: 827 EPAHSELLDAASSSSSSSCPPCSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTC 886
Query: 170 ELA--------------------NGARGFCPEMGQNESLSEERKGHESKRKSGGRG---- 205
++ G RG P + +S GH++KR +GGRG
Sbjct: 887 KVTVNSASQLQAHNTGAKHRWMMEGQRG-APRRSRGRPVSRGGAGHKAKRVTGGRGGRQG 945
Query: 206 -SPSSH 210
SP+ H
Sbjct: 946 PSPAFH 951
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 33.1 bits (74), Expect = 0.18
Identities = 46/186 (24%), Positives = 60/186 (32%), Gaps = 55/186 (29%)
Query: 55 PQRRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCA 114
P GAPGEP PP + PL P P P C
Sbjct: 791 PTLASGAPGEPQSKVPAAPP------------------------LGPPLQPPPTPDPTCR 826
Query: 115 ARLAGSL--ATDLSRSHSLLP--PWVDLKEP-PPPSAPSLLLEDPGQGGCHGAQSCVGTC 169
L A S S S P P + P P P+A ++ G+G TC
Sbjct: 827 EPAHSELLDAASSSSSSSCPPCSPEPGREAPGPEPAAAAVGSSMSGEGRSEKGHLYCPTC 886
Query: 170 ELA--------------------NGARGFCPEMGQNESLSEERKGHESKRKSGGRG---- 205
++ G RG P + +S GH++KR +GGRG
Sbjct: 887 KVTVNSASQLQAHNTGAKHRWMMEGQRG-APRRSRGRPVSRGGAGHKAKRVTGGRGGRQG 945
Query: 206 -SPSSH 210
SP+ H
Sbjct: 946 PSPAFH 951
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 33.1 bits (74), Expect = 0.18
Identities = 52/199 (26%), Positives = 65/199 (32%), Gaps = 31/199 (15%)
Query: 48 TEP-PPRRPQRR----------------QGAPGEPHLGFSLTPPHLFS---LKQTPGGSS 87
+EP PPR P RR G+ EP L P L S + GSS
Sbjct: 305 SEPEPPREPPRRPAFLPVGPDDTNSEYESGSESEPDLSEDADSPWLLSNLVSRMISEGSS 364
Query: 88 ---CRKEAVLPRLRVT-RPLVPEPAIL-----PVCAARLAGSLATDLSRSHSLLPPWVDL 138
C + + P R P+ P P AA G D+ + PP
Sbjct: 365 PIRCPGQCLSPAPRPPGEPVSPAGGAAQDSQDPEAAAGPGGVELVDMETLCAPPPPAPAA 424
Query: 139 KEPPPPS-APSLLLEDPGQGGCHGAQSCVGTCELANGA-RGFCPEMGQNESLSEERKGHE 196
P P P L L +P + + G A C E E EE +
Sbjct: 425 PRPGPAQPGPCLFLSNPTRDTITPLWAAPGRAARPGRACSAACSEEEDEEDDEEEEDAED 484
Query: 197 SKRKSGGRGSPSSHPTQAS 215
S GGRG+ S P AS
Sbjct: 485 SAGSPGGRGTGPSAPRDAS 503
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 33.1 bits (74), Expect = 0.18
Identities = 52/199 (26%), Positives = 65/199 (32%), Gaps = 31/199 (15%)
Query: 48 TEP-PPRRPQRR----------------QGAPGEPHLGFSLTPPHLFS---LKQTPGGSS 87
+EP PPR P RR G+ EP L P L S + GSS
Sbjct: 278 SEPEPPREPPRRPAFLPVGPDDTNSEYESGSESEPDLSEDADSPWLLSNLVSRMISEGSS 337
Query: 88 ---CRKEAVLPRLRVT-RPLVPEPAIL-----PVCAARLAGSLATDLSRSHSLLPPWVDL 138
C + + P R P+ P P AA G D+ + PP
Sbjct: 338 PIRCPGQCLSPAPRPPGEPVSPAGGAAQDSQDPEAAAGPGGVELVDMETLCAPPPPAPAA 397
Query: 139 KEPPPPS-APSLLLEDPGQGGCHGAQSCVGTCELANGA-RGFCPEMGQNESLSEERKGHE 196
P P P L L +P + + G A C E E EE +
Sbjct: 398 PRPGPAQPGPCLFLSNPTRDTITPLWAAPGRAARPGRACSAACSEEEDEEDDEEEEDAED 457
Query: 197 SKRKSGGRGSPSSHPTQAS 215
S GGRG+ S P AS
Sbjct: 458 SAGSPGGRGTGPSAPRDAS 476
>gi|169172231 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 32.7 bits (73), Expect = 0.24
Identities = 43/144 (29%), Positives = 58/144 (40%), Gaps = 29/144 (20%)
Query: 39 SGRGTGLDTTEPPPRRPQRRQGAP--GEPH-------LGFSLTP---PHLFSLKQTPGGS 86
SG G+G D PPP P+RR+ P H LG + TP P +L G +
Sbjct: 54 SGEGSGRDNNTPPPPPPRRRRRPPVVAATHRRRLGSGLGLTTTPGLGPR--ALCGPRGWA 111
Query: 87 SCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHSL--LPPWVDLKEPPPP 144
+ R EA LR++ V + G +S S ++ P ++ L PPPP
Sbjct: 112 AGRGEAGATGLRLS---VGAATVRGWAGGYFRGDGGRGVSESVAVGTGPDFLLLSPPPPP 168
Query: 145 ----------SAPSLLLEDPGQGG 158
SAP L E PG G
Sbjct: 169 PAEVAELPLSSAPPLHEEAPGVRG 192
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 32.7 bits (73), Expect = 0.24
Identities = 54/178 (30%), Positives = 66/178 (37%), Gaps = 34/178 (19%)
Query: 1 MPGAAGLIHGTPLSQLQRPQRAR-CRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRRQ 59
+PGAA L G Q+P+R R + G R + R L T PP RRP R
Sbjct: 85 LPGAAALGAGA-----QQPRRRRLAQPPGSRAPLQVGGAPRRRAHL-TGGPPRRRPPRLA 138
Query: 60 GAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAG 119
A G P + P L P + R L R+ R L P PA AG
Sbjct: 139 AAHGLP----ASEAPGL-----RPDSARTRLRLRLASARLPRGLPPAPA---------AG 180
Query: 120 SLATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARG 177
+R L L +PPP +P L + PG A S TC A G G
Sbjct: 181 LWRAGCTRLRPL------LLQPPPMLSPG-LAQSPGVELHARAHSRAHTC--AGGGEG 229
>gi|169170975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 32.7 bits (73), Expect = 0.24
Identities = 43/144 (29%), Positives = 58/144 (40%), Gaps = 29/144 (20%)
Query: 39 SGRGTGLDTTEPPPRRPQRRQGAP--GEPH-------LGFSLTP---PHLFSLKQTPGGS 86
SG G+G D PPP P+RR+ P H LG + TP P +L G +
Sbjct: 54 SGEGSGRDNNTPPPPPPRRRRRPPVVAATHRRRLGSGLGLTTTPGLGPR--ALCGPRGWA 111
Query: 87 SCRKEAVLPRLRVTRPLVPEPAILPVCAARLAGSLATDLSRSHSL--LPPWVDLKEPPPP 144
+ R EA LR++ V + G +S S ++ P ++ L PPPP
Sbjct: 112 AGRGEAGATGLRLS---VGAATVRGWAGGYFRGDGGRGVSESVAVGTGPDFLLLSPPPPP 168
Query: 145 ----------SAPSLLLEDPGQGG 158
SAP L E PG G
Sbjct: 169 PAEVAELPLSSAPPLHEEAPGVRG 192
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 32.7 bits (73), Expect = 0.24
Identities = 54/178 (30%), Positives = 66/178 (37%), Gaps = 34/178 (19%)
Query: 1 MPGAAGLIHGTPLSQLQRPQRAR-CRGRGCRDSAEHRDVSGRGTGLDTTEPPPRRPQRRQ 59
+PGAA L G Q+P+R R + G R + R L T PP RRP R
Sbjct: 85 LPGAAALGAGA-----QQPRRRRLAQPPGSRAPLQVGGAPRRRAHL-TGGPPRRRPPRLA 138
Query: 60 GAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRPLVPEPAILPVCAARLAG 119
A G P + P L P + R L R+ R L P PA AG
Sbjct: 139 AAHGLP----ASEAPGL-----RPDSARTRLRLRLASARLPRGLPPAPA---------AG 180
Query: 120 SLATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDPGQGGCHGAQSCVGTCELANGARG 177
+R L L +PPP +P L + PG A S TC A G G
Sbjct: 181 LWRAGCTRLRPL------LLQPPPMLSPG-LAQSPGVELHARAHSRAHTC--AGGGEG 229
>gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens]
Length = 345
Score = 32.0 bits (71), Expect = 0.41
Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 26/113 (23%)
Query: 43 TGLDTTEPPPRRPQRRQGAPGEPHLGFSLTPPHLFSLKQTPGGSSCRKEAVLPRLRVTRP 102
T DT E P P + G+ H S LFS GG +C+K A + + R
Sbjct: 92 TATDTFEAAPPAPAPAPASSGQHHDFLS----DLFS--DDYGGKNCKKPAEYGYVSLGRL 145
Query: 103 LVPEPAILPVCAARLAGSLATDLSRSHSLLPPWVDLKEPPPPSAPSLLLEDPG 155
+ A+ P C A L PP PPPP P+ L +PG
Sbjct: 146 GAAKGALHPGCFAPLH--------------PP------PPPPPPPAELKAEPG 178
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,550,453
Number of Sequences: 37866
Number of extensions: 781726
Number of successful extensions: 3131
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 2955
Number of HSP's gapped (non-prelim): 345
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.