Guide to the Human Genome
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Search of human proteins with 239749673

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749673 PREDICTED: hypothetical protein XP_002347141 [Homo
sapiens]
         (295 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749673 PREDICTED: hypothetical protein XP_002347141 [Homo ...   594   e-170
gi|239743940 PREDICTED: hypothetical protein XP_002342994 [Homo ...   594   e-170
gi|239755172 PREDICTED: hypothetical protein [Homo sapiens]           436   e-122
gi|150170670 piccolo isoform 2 [Homo sapiens]                          41   0.001
gi|150378539 piccolo isoform 1 [Homo sapiens]                          41   0.001
gi|13699803 WAS protein family, member 3 [Homo sapiens]                40   0.002
gi|157168329 formin 1 [Homo sapiens]                                   40   0.002
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]                   40   0.002
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    40   0.003
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap...    40   0.003
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         40   0.003
gi|11386183 WAS protein family, member 2 [Homo sapiens]                40   0.003
gi|11415052 retinoid X receptor, beta [Homo sapiens]                   39   0.004
gi|23592232 mediator complex subunit 19 [Homo sapiens]                 39   0.004
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]                39   0.004
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]                39   0.004
gi|13273315 homeobox B4 [Homo sapiens]                                 39   0.004
gi|41152235 ubiquitin specific protease 51 [Homo sapiens]              39   0.005
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]        38   0.009
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...    38   0.012
gi|39812378 RAN binding protein 9 [Homo sapiens]                       38   0.012
gi|4507691 transformation/transcription domain-associated protei...    37   0.016
gi|19924103 synapsin II isoform IIa [Homo sapiens]                     37   0.016
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]    37   0.016
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]     37   0.016
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]     37   0.016
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]    37   0.016
gi|19924101 synapsin II isoform IIb [Homo sapiens]                     37   0.016
gi|47132519 Ras association and pleckstrin homology domains 1 is...    37   0.016
gi|24497589 aristaless related homeobox [Homo sapiens]                 37   0.016

>gi|239749673 PREDICTED: hypothetical protein XP_002347141 [Homo
           sapiens]
          Length = 295

 Score =  594 bits (1531), Expect = e-170
 Identities = 295/295 (100%), Positives = 295/295 (100%)

Query: 1   MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC 60
           MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC
Sbjct: 1   MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC 60

Query: 61  TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV 120
           TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV
Sbjct: 61  TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV 120

Query: 121 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV 180
           RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV
Sbjct: 121 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV 180

Query: 181 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC 240
           PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC
Sbjct: 181 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC 240

Query: 241 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295
           QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF
Sbjct: 241 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295


>gi|239743940 PREDICTED: hypothetical protein XP_002342994 [Homo
           sapiens]
          Length = 295

 Score =  594 bits (1531), Expect = e-170
 Identities = 295/295 (100%), Positives = 295/295 (100%)

Query: 1   MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC 60
           MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC
Sbjct: 1   MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC 60

Query: 61  TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV 120
           TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV
Sbjct: 61  TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV 120

Query: 121 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV 180
           RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV
Sbjct: 121 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV 180

Query: 181 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC 240
           PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC
Sbjct: 181 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC 240

Query: 241 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295
           QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF
Sbjct: 241 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295


>gi|239755172 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 265

 Score =  436 bits (1121), Expect = e-122
 Identities = 218/218 (100%), Positives = 218/218 (100%)

Query: 78  VGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCVRVTVAAAAVAEGPRATG 137
           VGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCVRVTVAAAAVAEGPRATG
Sbjct: 48  VGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCVRVTVAAAAVAEGPRATG 107

Query: 138 WISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPP 197
           WISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPP
Sbjct: 108 WISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPP 167

Query: 198 STAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPCQAALLAARGTPALKWFT 257
           STAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPCQAALLAARGTPALKWFT
Sbjct: 168 STAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPCQAALLAARGTPALKWFT 227

Query: 258 SRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295
           SRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF
Sbjct: 228 SRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 265


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 164  SSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSG 223
            SS   +A PPPP PPP P PP P     P   PP++   T    ++ +V       +T+ 
Sbjct: 2397 SSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP----VTTA 2452

Query: 224  SSLRQVATALTLLRMPCQAALLAARGTPALKWFTS 258
            + L    T L         A+L + G P  +  T+
Sbjct: 2453 TPLFDAVTTLE------TTAVLRSNGLPVTRICTT 2481



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 17/73 (23%)

Query: 161  MGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPG--------------ASPPSTAARTW-- 204
            + +S+      PPPP PPP P PP P     P               ASP +TA   +  
Sbjct: 2399 LDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDA 2458

Query: 205  -ATLRRTSVLRSD 216
              TL  T+VLRS+
Sbjct: 2459 VTTLETTAVLRSN 2471


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 164  SSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSG 223
            SS   +A PPPP PPP P PP P     P   PP++   T    ++ +V       +T+ 
Sbjct: 2397 SSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP----VTTA 2452

Query: 224  SSLRQVATALTLLRMPCQAALLAARGTPALKWFTS 258
            + L    T L         A+L + G P  +  T+
Sbjct: 2453 TPLFDAVTTLE------TTAVLRSNGLPVTRICTT 2481



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 17/73 (23%)

Query: 161  MGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPG--------------ASPPSTAARTW-- 204
            + +S+      PPPP PPP P PP P     P               ASP +TA   +  
Sbjct: 2399 LDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDA 2458

Query: 205  -ATLRRTSVLRSD 216
              TL  T+VLRS+
Sbjct: 2459 VTTLETTAVLRSN 2471


>gi|13699803 WAS protein family, member 3 [Homo sapiens]
          Length = 502

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 165 STG--ATAGPPPPLPPPVPGPPAPSSSV--GPGASPPSTAAR 202
           STG   TA PPP  PPP PGPP P SS+   P   PP   A+
Sbjct: 387 STGLLVTAPPPPGPPPPPPGPPGPGSSLSSSPMHGPPVAEAK 428



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 6/41 (14%)

Query: 170 AGPPPPLPPPVPGPPAPSSSVGPGASP-----PSTAARTWA 205
           +GPPPP PPPV  P A ++ V P   P     P++A+ T A
Sbjct: 341 SGPPPPPPPPVI-PSAQTAFVSPLQMPMQPPFPASASSTHA 380


>gi|157168329 formin 1 [Homo sapiens]
          Length = 1196

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 15/26 (57%), Positives = 18/26 (69%)

Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPP 197
           PPPP PPP+P  PAP +  GP  +PP
Sbjct: 699 PPPPPPPPLPNSPAPPNPGGPPPAPP 724



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 17/29 (58%), Positives = 18/29 (62%)

Query: 169 TAGPPPPLPPPVPGPPAPSSSVGPGASPP 197
           +AGPP P PPP P P  P SS GP   PP
Sbjct: 675 SAGPPLPPPPPPPPPLPPPSSAGPPPPPP 703



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 12/48 (25%)

Query: 162 GVSSTGATAGPPPP--LPPP----------VPGPPAPSSSVGPGASPP 197
           G++S    A PPPP  +PPP           P PP P  S GP   PP
Sbjct: 636 GMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPP 683



 Score = 32.0 bits (71), Expect = 0.67
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201
           P PP+PP   GPP P     P   PP ++A
Sbjct: 667 PAPPMPPVSAGPPLPPPPPPPPPLPPPSSA 696



 Score = 28.1 bits (61), Expect = 9.6
 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 4/28 (14%)

Query: 171 GPPPPLPPPVPG---PPAPSSSVGPGAS 195
           G PPP PPP PG   PP P    G G+S
Sbjct: 717 GGPPPAPPP-PGLAPPPPPGLFFGLGSS 743


>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
          Length = 337

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 162 GVSSTGAT--AGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRT--SVLRS 215
           G ++  AT  AGPPP  PPP P PP    S  PG   P  AA + A LR    +V+RS
Sbjct: 30  GAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRS 87


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 165 STGATAGP-PPPLPPPV------PGPPAPSSSVGPGASPPSTAARTWA 205
           S GAT  P PPP PPP       P PP P+   GPG +PP    R  A
Sbjct: 13  SPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEA 60



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 15/29 (51%), Positives = 15/29 (51%)

Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTA 200
           PPPP PPP PGP  P       A PP  A
Sbjct: 38  PPPPAPPPGPGPAPPQHPPRAEALPPEAA 66



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 3/27 (11%)

Query: 173 PPPLPPPV---PGPPAPSSSVGPGASP 196
           PPP P P    PGPP P+S  G  ASP
Sbjct: 761 PPPGPAPAAASPGPPPPASPPGAPASP 787



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 147 MMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASP 196
           + + SP RL  R   G +   A+ GPPPP  P    P AP+S   P  SP
Sbjct: 750 LALGSP-RLVRRPPPGPAPAAASPGPPPPASP----PGAPASPRAPRTSP 794



 Score = 28.9 bits (63), Expect = 5.6
 Identities = 13/25 (52%), Positives = 13/25 (52%)

Query: 177 PPPVPGPPAPSSSVGPGASPPSTAA 201
           PPP P P A S    P ASPP   A
Sbjct: 761 PPPGPAPAAASPGPPPPASPPGAPA 785


>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
           sapiens]
          Length = 505

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 20/45 (44%), Positives = 20/45 (44%)

Query: 163 VSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATL 207
           V   G  A PPPP PPP PGPP P      G     T A   A L
Sbjct: 365 VLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGNKAAL 409



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 15/27 (55%), Positives = 16/27 (59%)

Query: 171 GPPPPLPPPVPGPPAPSSSVGPGASPP 197
           GPPPP PPP    P P  + G GA PP
Sbjct: 286 GPPPPPPPPHNSGPPPPPARGRGAPPP 312



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%)

Query: 166 TGATAGPPPPLPP-----PVPGPPAPSSSVGPGASPP 197
           + A +GPPPP P      PV  PP P     PG  PP
Sbjct: 352 SSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 4/30 (13%)

Query: 172 PPPPLPPPVP-GPPAPSSSV---GPGASPP 197
           PPP LP   P GPP P  SV   GP A PP
Sbjct: 346 PPPALPSSAPSGPPPPPPSVLGVGPVAPPP 375



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 14/47 (29%)

Query: 165 STGATAGPPPP--------LPPPVPG------PPAPSSSVGPGASPP 197
           S   TA PPPP        +PPP P       PPA  SS   G  PP
Sbjct: 315 SRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPP 361



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 164 SSTGATAGPPPPL---PPPVP----GPPAPSSSVGPGASPP 197
           S  G    PPPP    PPP P    G P P  S  P A+PP
Sbjct: 283 SRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPP 323



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/38 (39%), Positives = 16/38 (42%)

Query: 167 GATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTW 204
           G  A PPPP   P   PP P  S    A PP    R +
Sbjct: 306 GRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMY 343



 Score = 28.1 bits (61), Expect = 9.6
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASP--PSTA 200
           A   PPPP  P V  PP P + + P   P  PS+A
Sbjct: 320 AAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSA 354


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 7/63 (11%)

Query: 151 SPSRLQIRCCMGVSSTGATAG---PPPPLPPPVPGPPAPSSSV-GPGASPP--STAARTW 204
           SP   + R C     TG   G   PPPPLPPP P PP P   + G   SPP   T    W
Sbjct: 224 SPGGKRRRGCNS-EQTGLPPGLPLPPPPLPPPPPPPPPPPPPLPGLATSPPFQLTKPGLW 282

Query: 205 ATL 207
           +TL
Sbjct: 283 STL 285



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 8/51 (15%)

Query: 169 TAGPPPPLPPPVP------GPPAPSSSVGPGAS--PPSTAARTWATLRRTS 211
           T GPP P PPP+P      GPPA   SVG   S  PP+    T ++    S
Sbjct: 508 TEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNSNS 558



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 172 PPPPLPPPVP--GPPAPSSSVGPGASPPSTAA 201
           PPP LPPP P    P PS    P   PPS A+
Sbjct: 771 PPPALPPPPPLAKFPPPSQPQPPPPPPPSPAS 802



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWA 205
           L  +AS    Q  C  G  +  +T   P P     PGPP+     G  A PP++AA +  
Sbjct: 804 LKSLASVLEGQKYCYRGTGAAVSTRPGPLPTTQYSPGPPS-----GATALPPTSAAPSAQ 858

Query: 206 TLRRTSVLRSDHFFLTSGSSLRQ 228
              + S   S  F  + G   R+
Sbjct: 859 GSPQPSASSSSQFSTSGGPWARE 881



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 167  GATAGPPPPLPPPVPGPPAPSSS-VGPGASPPSTAAR 202
            GA+   PP  P P P  PAPS+    P AS P   AR
Sbjct: 1040 GASKAKPPTAPAP-PSAPAPSAQPTPPSASVPGKKAR 1075


>gi|11386183 WAS protein family, member 2 [Homo sapiens]
          Length = 498

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 166 TGATAGPPPPLPPPVPGPPAPSSSVGPGASPP--STAARTWATLRRTSVLRSDHF-FLTS 222
           TG    PPPP PPP P PP  + + G  A PP  S   +  ++L   S  RSD    +  
Sbjct: 387 TGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLSDTTKPKSSLPAVSDARSDLLSAIRQ 446

Query: 223 GSSLRQV 229
           G  LR+V
Sbjct: 447 GFQLRRV 453



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 170 AGPPPPLPPPVPG----PPAPSSSVGPGASPP 197
           A PPPP PPP       PP P S    GA PP
Sbjct: 362 AAPPPPPPPPAADYPTLPPPPLSQPTGGAPPP 393



 Score = 32.0 bits (71), Expect = 0.67
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 5/33 (15%)

Query: 170 AGPPPPLPPP-----VPGPPAPSSSVGPGASPP 197
           A PP P PPP     +P PP P     PG  PP
Sbjct: 317 APPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPP 349



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 7/33 (21%)

Query: 173 PPPLPPPVPGPPAPSSSVG-------PGASPPS 198
           PPP PPP+ G P P   VG       P  SPPS
Sbjct: 322 PPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPS 354



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 172 PPPPLPPPVPG-PPAPSSSVGPGASPP 197
           PPPPL  P  G PP P     PG  PP
Sbjct: 379 PPPPLSQPTGGAPPPPPPPPPPGPPPP 405



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 167 GATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTA 200
           G+   PPPP PP    PP P  +  P   PP  A
Sbjct: 342 GSPGTPPPPSPPSF--PPHPDFAAPPPPPPPPAA 373



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 164 SSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPP 197
           SS  + + PPP   PP+  PP P     P  +PP
Sbjct: 292 SSVVSPSHPPPA--PPLGSPPGPKPGFAPPPAPP 323


>gi|11415052 retinoid X receptor, beta [Homo sapiens]
          Length = 533

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 3/35 (8%)

Query: 167 GATAGPPPPLPPPVPGPPAP--SSSVG-PGASPPS 198
           G+ A PPPP+PPP  G P P  SSS+G PG  PP+
Sbjct: 115 GSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPA 149



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 171 GPPPPLPPPVPGPPAPSSSVGPGASPP 197
           G PPP PP  P PP+ + S+G   +PP
Sbjct: 94  GVPPPSPPGPPLPPSTAPSLGGSGAPP 120



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%)

Query: 163 VSSTGATAGPPPPLPPPVPGP---PAPSSSV---GPGASPP 197
           +SS+  + G PPP PP   GP   P  +S+V   G G+ PP
Sbjct: 136 ISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPP 176



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 9/45 (20%)

Query: 162 GVSSTGATAGPPPPLPPPV-----PGPPAPSSSV----GPGASPP 197
           G  S    +  P PLP  V     PGPP P S+     G GA PP
Sbjct: 77  GRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPP 121



 Score = 28.1 bits (61), Expect = 9.6
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 9/38 (23%)

Query: 163 VSSTGATAGPPPPLPPPVPG------PPAPSSSVGPGA 194
           VS  G  +GPP  + PPV G      PP P    GPGA
Sbjct: 166 VSLPGGGSGPPEDVKPPVLGVRGLHCPPPPG---GPGA 200


>gi|23592232 mediator complex subunit 19 [Homo sapiens]
          Length = 194

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 6/41 (14%)

Query: 167 GATAGPPPPL------PPPVPGPPAPSSSVGPGASPPSTAA 201
           GA A PPPP       P   P PP P +  GPG +PP TAA
Sbjct: 9   GAQADPPPPPTALGFGPGKPPPPPPPPAGGGPGTAPPPTAA 49


>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
          Length = 1240

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 5/36 (13%)

Query: 167 GATAGPPPPLPPPVPG-----PPAPSSSVGPGASPP 197
           GA A P PPLPPP+PG     PP P    G G  PP
Sbjct: 467 GAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPP 502



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 14/61 (22%)

Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLP-----PPVPGPPAPSSSVG----PGASP 196
           ++ V+ P  L+ +     +ST     PPP LP     PP P PP P  SVG    P A P
Sbjct: 405 ILKVSQPRALEQQ-----ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPP 459

Query: 197 P 197
           P
Sbjct: 460 P 460



 Score = 31.6 bits (70), Expect = 0.87
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 4/30 (13%)

Query: 172 PPPPLP----PPVPGPPAPSSSVGPGASPP 197
           PPPPLP    PP P P  P    GP   PP
Sbjct: 490 PPPPLPGLGCPPPPPPLLPGMGWGPPPPPP 519



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 5/27 (18%)

Query: 165 STGATAGPPPPLPPPVPG-----PPAP 186
           S GA A P  P PPP+PG     PPAP
Sbjct: 448 SVGAKALPTAPPPPPLPGLGAMAPPAP 474



 Score = 28.9 bits (63), Expect = 5.6
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 10/35 (28%)

Query: 172 PPPPLPPPVPG----------PPAPSSSVGPGASP 196
           PPPP PPP+P           PP P   +G  A P
Sbjct: 438 PPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPP 472


>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
          Length = 1249

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 5/36 (13%)

Query: 167 GATAGPPPPLPPPVPG-----PPAPSSSVGPGASPP 197
           GA A P PPLPPP+PG     PP P    G G  PP
Sbjct: 467 GAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPP 502



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 14/61 (22%)

Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLP-----PPVPGPPAPSSSVG----PGASP 196
           ++ V+ P  L+ +     +ST     PPP LP     PP P PP P  SVG    P A P
Sbjct: 405 ILKVSQPRALEQQ-----ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPP 459

Query: 197 P 197
           P
Sbjct: 460 P 460



 Score = 31.6 bits (70), Expect = 0.87
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 4/30 (13%)

Query: 172 PPPPLP----PPVPGPPAPSSSVGPGASPP 197
           PPPPLP    PP P P  P    GP   PP
Sbjct: 490 PPPPLPGLGCPPPPPPLLPGMGWGPPPPPP 519



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 5/27 (18%)

Query: 165 STGATAGPPPPLPPPVPG-----PPAP 186
           S GA A P  P PPP+PG     PPAP
Sbjct: 448 SVGAKALPTAPPPPPLPGLGAMAPPAP 474



 Score = 28.9 bits (63), Expect = 5.6
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 10/35 (28%)

Query: 172 PPPPLPPPVPG----------PPAPSSSVGPGASP 196
           PPPP PPP+P           PP P   +G  A P
Sbjct: 438 PPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPP 472


>gi|13273315 homeobox B4 [Homo sapiens]
          Length = 251

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 17/30 (56%), Positives = 18/30 (60%)

Query: 171 GPPPPLPPPVPGPPAPSSSVGPGASPPSTA 200
           GPPPP PPP P PP P  S    A PP+ A
Sbjct: 72  GPPPPPPPPPPPPPPPGLSPRAPAPPPAGA 101



 Score = 35.0 bits (79), Expect = 0.079
 Identities = 17/43 (39%), Positives = 18/43 (41%)

Query: 158 RCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTA 200
           R    V    A   P PP PPP P PP P   + P A  P  A
Sbjct: 57  RAACTVQRYAACRDPGPPPPPPPPPPPPPPPGLSPRAPAPPPA 99


>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
          Length = 711

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 9/48 (18%)

Query: 164 SSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTS 211
           S  G +A PPPP  PP P PP P         PP+   R W   RR S
Sbjct: 116 SQPGLSAPPPPPARPPPPPPPPP---------PPAPRPRAWRGSRRRS 154



 Score = 28.9 bits (63), Expect = 5.6
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 154 RLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAP 186
           R + R   G+S+       PPP PPP P PPAP
Sbjct: 111 RARSRSQPGLSAPPPPPARPPPPPPP-PPPPAP 142


>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
          Length = 380

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 17/36 (47%), Positives = 18/36 (50%)

Query: 163 VSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPS 198
           VS+ G    PP   PPP PGPP P     P   PPS
Sbjct: 156 VSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPS 191



 Score = 36.6 bits (83), Expect = 0.027
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 9/45 (20%)

Query: 162 GVSSTGATAGPPPPLPPPVPGPP---------APSSSVGPGASPP 197
           G  +  A   PPPP PPP PGPP          P+++ G G  PP
Sbjct: 161 GPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPP 205



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 162 GVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTS 211
           GV +    AG  PP  PP+P    P    G   +P   AA   A LR+ S
Sbjct: 192 GVPAAAHGAGGGPPPAPPLPAAQGPGG--GGAGAPGLAAAIAGAKLRKVS 239



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 171 GPPPPLPPPVPGPPAPSSSV--GPGASPPSTAAR 202
           GPPPP   P  G PA +     GP  +PP  AA+
Sbjct: 181 GPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQ 214


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 16/31 (51%), Positives = 17/31 (54%)

Query: 169 TAGPPPPLPPPVPGPPAPSSSVGPGASPPST 199
           T  PPP LP P PG P P+  V P   PP T
Sbjct: 336 TLAPPPHLPGPPPGAPPPAPHVNPAFFPPPT 366



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 5/27 (18%)

Query: 171 GPPPPLPPPVPGPPAPSSSVGPGASPP 197
           GPPP  PPP  GPP P     PG  PP
Sbjct: 304 GPPPGPPPPQQGPPPP-----PGPFPP 325



 Score = 32.0 bits (71), Expect = 0.67
 Identities = 13/24 (54%), Positives = 13/24 (54%)

Query: 174 PPLPPPVPGPPAPSSSVGPGASPP 197
           PPL P  PGPP P    GP   PP
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPP 310



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 16/48 (33%)

Query: 171 GPPPPLP-------PPV--PGPPAPSSSVGPG-------ASPPSTAAR 202
           GPPPP P       PP+  PGPP P     PG       A PP+   R
Sbjct: 225 GPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDR 272



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 167 GATAGPPPPLP-PPVPGPPAPSSSVGPGASPP 197
           G   G PP  P PP P PP P     PG  PP
Sbjct: 281 GQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 163 VSSTGATAGPPPPLP-PPVPGPPAPSSSVGPGASPPSTAA 201
           V   G   GPPPP   PP P  P P    GP   PP T A
Sbjct: 300 VPGYGPPPGPPPPQQGPPPPPGPFPPRPPGP-LGPPLTLA 338



 Score = 28.1 bits (61), Expect = 9.6
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 171 GP-PPPLPPPVPGPPAPSSSVGPGASPP 197
           GP PP  PPPVPG   P     P   PP
Sbjct: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPP 317



 Score = 28.1 bits (61), Expect = 9.6
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 12/40 (30%)

Query: 171 GPPPPL---PPPVPGPPAPSSSVG---------PGASPPS 198
           GPPPP    PP  PGP  P  ++          PGA PP+
Sbjct: 315 GPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPA 354


>gi|39812378 RAN binding protein 9 [Homo sapiens]
          Length = 729

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 4/31 (12%)

Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPS 198
           ATA PPPP PP    PP P+S+  P + PP+
Sbjct: 78  ATAAPPPPPPP----PPPPASAAAPASGPPA 104



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 9/45 (20%)

Query: 165 STGATAGPPPPLPP------PVPGPPAP---SSSVGPGASPPSTA 200
           +T A   PPPP PP      P  GPPAP   ++  GP    P+ A
Sbjct: 78  ATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPA 122


>gi|4507691 transformation/transcription domain-associated protein
           [Homo sapiens]
          Length = 3830

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%)

Query: 162 GVSSTGATAGPPP-----PLPPPVPGPPAPSSSVGPGASPP 197
           GV +  A  GP P     P PPP P PP P++ V P   PP
Sbjct: 486 GVPTAPAAPGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPP 526


>gi|19924103 synapsin II isoform IIa [Homo sapiens]
          Length = 582

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 172 PPPPLPPPVPGPPA-------PSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGS 224
           P  P PPP PGP A       P++S GP   PP  +A         SV     FF +   
Sbjct: 31  PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSV--GSSFFSSLSQ 88

Query: 225 SLRQVATALTLLRMPCQAALLAAR 248
           +++Q A +  L+  P  A   A +
Sbjct: 89  AVKQTAASAGLVDAPAPAPAAARK 112


>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 17/34 (50%), Positives = 17/34 (50%)

Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201
           AT   PPP PPP P PPAP     P    PS  A
Sbjct: 646 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 679



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 163 VSSTGATAGPPPPLPPPVPGP-----PAPSSSVGPGASPPSTAARTWATLRRTSVLR 214
           + +T     PPPP PPP P P     P P S  G   SP      + +    TSV++
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 700



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 14/79 (17%)

Query: 139 ISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSS--------- 189
           + V  G   M   P+        G ++T  TAGP P  P   P  P PS +         
Sbjct: 547 VLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 606

Query: 190 -----VGPGASPPSTAART 203
                 GPGA     A+ T
Sbjct: 607 NLLGPAGPGAGGSGVASPT 625



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%)

Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGP-----PAPSS----SVGPGASP 196
           L   A P ++ +   + ++  G    P P    P PGP      APSS    S   GA P
Sbjct: 364 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 423

Query: 197 PSTA 200
           P  A
Sbjct: 424 PGPA 427


>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 17/34 (50%), Positives = 17/34 (50%)

Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201
           AT   PPP PPP P PPAP     P    PS  A
Sbjct: 646 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 679



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 163 VSSTGATAGPPPPLPPPVPGP-----PAPSSSVGPGASPPSTAARTWATLRRTSVLR 214
           + +T     PPPP PPP P P     P P S  G   SP      + +    TSV++
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 700



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 14/79 (17%)

Query: 139 ISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSS--------- 189
           + V  G   M   P+        G ++T  TAGP P  P   P  P PS +         
Sbjct: 547 VLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 606

Query: 190 -----VGPGASPPSTAART 203
                 GPGA     A+ T
Sbjct: 607 NLLGPAGPGAGGSGVASPT 625



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%)

Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGP-----PAPSS----SVGPGASP 196
           L   A P ++ +   + ++  G    P P    P PGP      APSS    S   GA P
Sbjct: 364 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 423

Query: 197 PSTA 200
           P  A
Sbjct: 424 PGPA 427


>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 17/34 (50%), Positives = 17/34 (50%)

Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201
           AT   PPP PPP P PPAP     P    PS  A
Sbjct: 646 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 679



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 163 VSSTGATAGPPPPLPPPVPGP-----PAPSSSVGPGASPPSTAARTWATLRRTSVLR 214
           + +T     PPPP PPP P P     P P S  G   SP      + +    TSV++
Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 700



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 14/79 (17%)

Query: 139 ISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSS--------- 189
           + V  G   M   P+        G ++T  TAGP P  P   P  P PS +         
Sbjct: 547 VLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 606

Query: 190 -----VGPGASPPSTAART 203
                 GPGA     A+ T
Sbjct: 607 NLLGPAGPGAGGSGVASPT 625



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%)

Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGP-----PAPSS----SVGPGASP 196
           L   A P ++ +   + ++  G    P P    P PGP      APSS    S   GA P
Sbjct: 364 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 423

Query: 197 PSTA 200
           P  A
Sbjct: 424 PGPA 427


>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
          Length = 1132

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 17/34 (50%), Positives = 17/34 (50%)

Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201
           AT   PPP PPP P PPAP     P    PS  A
Sbjct: 652 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 685



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 163 VSSTGATAGPPPPLPPPVPGP-----PAPSSSVGPGASPPSTAARTWATLRRTSVLR 214
           + +T     PPPP PPP P P     P P S  G   SP      + +    TSV++
Sbjct: 650 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 706



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 14/79 (17%)

Query: 139 ISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSS--------- 189
           + V  G   M   P+        G ++T  TAGP P  P   P  P PS +         
Sbjct: 553 VLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 612

Query: 190 -----VGPGASPPSTAART 203
                 GPGA     A+ T
Sbjct: 613 NLLGPAGPGAGGSGVASPT 631



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%)

Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGP-----PAPSS----SVGPGASP 196
           L   A P ++ +   + ++  G    P P    P PGP      APSS    S   GA P
Sbjct: 370 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 429

Query: 197 PSTA 200
           P  A
Sbjct: 430 PGPA 433


>gi|19924101 synapsin II isoform IIb [Homo sapiens]
          Length = 478

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 172 PPPPLPPPVPGPPA-------PSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGS 224
           P  P PPP PGP A       P++S GP   PP  +A         SV     FF +   
Sbjct: 31  PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSV--GSSFFSSLSQ 88

Query: 225 SLRQVATALTLLRMPCQAALLAAR 248
           +++Q A +  L+  P  A   A +
Sbjct: 89  AVKQTAASAGLVDAPAPAPAAARK 112


>gi|47132519 Ras association and pleckstrin homology domains 1
           isoform 1 [Homo sapiens]
          Length = 1250

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 18/53 (33%), Positives = 26/53 (49%)

Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGS 224
           PPPP PPP P PP P     P  S PS  +     ++ +++ R  +    SG+
Sbjct: 630 PPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGA 682



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)

Query: 172 PPPPLPPPVPGPPAPSSSVGPGASP-PSTAA 201
           P PPLPPP P PP P     P   P PS +A
Sbjct: 624 PSPPLPPPPPPPPPPPPPPPPPPPPLPSQSA 654



 Score = 31.6 bits (70), Expect = 0.87
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 6/41 (14%)

Query: 163 VSSTGATAGPPPPLPPPVPG------PPAPSSSVGPGASPP 197
           V   G    PPPP PPP PG       PAP +   P  S P
Sbjct: 703 VPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAP 743



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 166 TGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTA 200
           T +   PP P PPP P PP P     P   P  +A
Sbjct: 620 TASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSA 654



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPS 198
           PPPP PPP P P +  + + P    PS
Sbjct: 710 PPPPPPPPPPTPGSAMAQLKPAPCAPS 736



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 9/31 (29%)

Query: 173 PPPLPPPVPGPPAPSSSVGPGASPPSTAART 203
           PPP P PVP PP P         PP TA+ T
Sbjct: 928 PPPPPSPVPAPPPP---------PPPTASPT 949



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 170 AGPPPPLPPPVPGPPAPSSSVGPGAS-PPSTAARTWA 205
           A P PP PPP+P P  P +   P  + P  T+ +T A
Sbjct: 759 APPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVA 795



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 5/25 (20%)

Query: 172 PPPPLPPPVPGPPAPSSSVGPGASP 196
           PPPP P P P PP P     P ASP
Sbjct: 929 PPPPSPVPAPPPPPP-----PTASP 948



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201
           P PP PPP    P P  S  PG     T++
Sbjct: 936 PAPPPPPPPTASPTPDKSGSPGKKTSKTSS 965



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 150 ASPSRLQIRCCMGVSSTGA-TAGPPPPLPPPVPGPPAPSSSVGPGASPPST 199
           A P  L+I     ++     T  PPPP+P P+P P AP   +    +P ST
Sbjct: 742 APPPPLKIHQVQHITQVAPPTPPPPPPIPAPLP-PQAPPKPLVTIPAPTST 791



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 148 MVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPS 198
           +V  P+    +    V +  A   P PP+PP    P  P+S + P  SPP+
Sbjct: 782 LVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPP--SPPT 830


>gi|24497589 aristaless related homeobox [Homo sapiens]
          Length = 562

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 144 GRLMMVASPSRLQIRCCMGVSSTGATAGP---PPPLPPPVPGPPAPSSSVGPGASPPSTA 200
           GRL+  A+ +          ++T ATAGP    PP PPP   P       G  A+  + A
Sbjct: 94  GRLLQGAAAAAAAAAAAAAAAAT-ATAGPRGEAPPPPPPTARPGERPDGAGAAAAAAAAA 152

Query: 201 ARTWATLR 208
           A  W TL+
Sbjct: 153 AAAWDTLK 160


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.132    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,065,727
Number of Sequences: 37866
Number of extensions: 718294
Number of successful extensions: 23061
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 506
Number of HSP's that attempted gapping in prelim test: 11419
Number of HSP's gapped (non-prelim): 8377
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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