BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239749673 PREDICTED: hypothetical protein XP_002347141 [Homo sapiens] (295 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239749673 PREDICTED: hypothetical protein XP_002347141 [Homo ... 594 e-170 gi|239743940 PREDICTED: hypothetical protein XP_002342994 [Homo ... 594 e-170 gi|239755172 PREDICTED: hypothetical protein [Homo sapiens] 436 e-122 gi|150170670 piccolo isoform 2 [Homo sapiens] 41 0.001 gi|150378539 piccolo isoform 1 [Homo sapiens] 41 0.001 gi|13699803 WAS protein family, member 3 [Homo sapiens] 40 0.002 gi|157168329 formin 1 [Homo sapiens] 40 0.002 gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 40 0.002 gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 40 0.003 gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 40 0.003 gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 40 0.003 gi|11386183 WAS protein family, member 2 [Homo sapiens] 40 0.003 gi|11415052 retinoid X receptor, beta [Homo sapiens] 39 0.004 gi|23592232 mediator complex subunit 19 [Homo sapiens] 39 0.004 gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 39 0.004 gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 39 0.004 gi|13273315 homeobox B4 [Homo sapiens] 39 0.004 gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 39 0.005 gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 38 0.009 gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 38 0.012 gi|39812378 RAN binding protein 9 [Homo sapiens] 38 0.012 gi|4507691 transformation/transcription domain-associated protei... 37 0.016 gi|19924103 synapsin II isoform IIa [Homo sapiens] 37 0.016 gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 37 0.016 gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 37 0.016 gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 37 0.016 gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 37 0.016 gi|19924101 synapsin II isoform IIb [Homo sapiens] 37 0.016 gi|47132519 Ras association and pleckstrin homology domains 1 is... 37 0.016 gi|24497589 aristaless related homeobox [Homo sapiens] 37 0.016 >gi|239749673 PREDICTED: hypothetical protein XP_002347141 [Homo sapiens] Length = 295 Score = 594 bits (1531), Expect = e-170 Identities = 295/295 (100%), Positives = 295/295 (100%) Query: 1 MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC 60 MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC Sbjct: 1 MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC 60 Query: 61 TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV 120 TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV Sbjct: 61 TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV 120 Query: 121 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV 180 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV Sbjct: 121 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV 180 Query: 181 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC 240 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC Sbjct: 181 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC 240 Query: 241 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF Sbjct: 241 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295 >gi|239743940 PREDICTED: hypothetical protein XP_002342994 [Homo sapiens] Length = 295 Score = 594 bits (1531), Expect = e-170 Identities = 295/295 (100%), Positives = 295/295 (100%) Query: 1 MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC 60 MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC Sbjct: 1 MSVLLPWAYSSSDSDDIPPEADGCPTVHITLARRLALIVQDQGWVMSQARGHDNTCPITC 60 Query: 61 TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV 120 TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV Sbjct: 61 TRDPLLTNLLDLSKAAQVGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCV 120 Query: 121 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV 180 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV Sbjct: 121 RVTVAAAAVAEGPRATGWISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPV 180 Query: 181 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC 240 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC Sbjct: 181 PGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPC 240 Query: 241 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF Sbjct: 241 QAALLAARGTPALKWFTSRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295 >gi|239755172 PREDICTED: hypothetical protein [Homo sapiens] Length = 265 Score = 436 bits (1121), Expect = e-122 Identities = 218/218 (100%), Positives = 218/218 (100%) Query: 78 VGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCVRVTVAAAAVAEGPRATG 137 VGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCVRVTVAAAAVAEGPRATG Sbjct: 48 VGDPLLLYQLGGVESNAALERLRLDRRVCMLGHHVHRGHSLCVRVTVAAAAVAEGPRATG 107 Query: 138 WISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPP 197 WISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPP Sbjct: 108 WISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPP 167 Query: 198 STAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPCQAALLAARGTPALKWFT 257 STAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPCQAALLAARGTPALKWFT Sbjct: 168 STAARTWATLRRTSVLRSDHFFLTSGSSLRQVATALTLLRMPCQAALLAARGTPALKWFT 227 Query: 258 SRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 295 SRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF Sbjct: 228 SRCFFSSSSSTMISTSRSEKFIFLFLAGTAMASPLPSF 265 >gi|150170670 piccolo isoform 2 [Homo sapiens] Length = 4935 Score = 40.8 bits (94), Expect = 0.001 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 10/95 (10%) Query: 164 SSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSG 223 SS +A PPPP PPP P PP P P PP++ T ++ +V +T+ Sbjct: 2397 SSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP----VTTA 2452 Query: 224 SSLRQVATALTLLRMPCQAALLAARGTPALKWFTS 258 + L T L A+L + G P + T+ Sbjct: 2453 TPLFDAVTTLE------TTAVLRSNGLPVTRICTT 2481 Score = 35.8 bits (81), Expect = 0.046 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 17/73 (23%) Query: 161 MGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPG--------------ASPPSTAARTW-- 204 + +S+ PPPP PPP P PP P P ASP +TA + Sbjct: 2399 LDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDA 2458 Query: 205 -ATLRRTSVLRSD 216 TL T+VLRS+ Sbjct: 2459 VTTLETTAVLRSN 2471 >gi|150378539 piccolo isoform 1 [Homo sapiens] Length = 5142 Score = 40.8 bits (94), Expect = 0.001 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 10/95 (10%) Query: 164 SSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSG 223 SS +A PPPP PPP P PP P P PP++ T ++ +V +T+ Sbjct: 2397 SSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP----VTTA 2452 Query: 224 SSLRQVATALTLLRMPCQAALLAARGTPALKWFTS 258 + L T L A+L + G P + T+ Sbjct: 2453 TPLFDAVTTLE------TTAVLRSNGLPVTRICTT 2481 Score = 35.8 bits (81), Expect = 0.046 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 17/73 (23%) Query: 161 MGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPG--------------ASPPSTAARTW-- 204 + +S+ PPPP PPP P PP P P ASP +TA + Sbjct: 2399 LDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDA 2458 Query: 205 -ATLRRTSVLRSD 216 TL T+VLRS+ Sbjct: 2459 VTTLETTAVLRSN 2471 >gi|13699803 WAS protein family, member 3 [Homo sapiens] Length = 502 Score = 40.4 bits (93), Expect = 0.002 Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Query: 165 STG--ATAGPPPPLPPPVPGPPAPSSSV--GPGASPPSTAAR 202 STG TA PPP PPP PGPP P SS+ P PP A+ Sbjct: 387 STGLLVTAPPPPGPPPPPPGPPGPGSSLSSSPMHGPPVAEAK 428 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 6/41 (14%) Query: 170 AGPPPPLPPPVPGPPAPSSSVGPGASP-----PSTAARTWA 205 +GPPPP PPPV P A ++ V P P P++A+ T A Sbjct: 341 SGPPPPPPPPVI-PSAQTAFVSPLQMPMQPPFPASASSTHA 380 >gi|157168329 formin 1 [Homo sapiens] Length = 1196 Score = 40.0 bits (92), Expect = 0.002 Identities = 15/26 (57%), Positives = 18/26 (69%) Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPP 197 PPPP PPP+P PAP + GP +PP Sbjct: 699 PPPPPPPPLPNSPAPPNPGGPPPAPP 724 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/29 (58%), Positives = 18/29 (62%) Query: 169 TAGPPPPLPPPVPGPPAPSSSVGPGASPP 197 +AGPP P PPP P P P SS GP PP Sbjct: 675 SAGPPLPPPPPPPPPLPPPSSAGPPPPPP 703 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 12/48 (25%) Query: 162 GVSSTGATAGPPPP--LPPP----------VPGPPAPSSSVGPGASPP 197 G++S A PPPP +PPP P PP P S GP PP Sbjct: 636 GMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPP 683 Score = 32.0 bits (71), Expect = 0.67 Identities = 13/30 (43%), Positives = 16/30 (53%) Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201 P PP+PP GPP P P PP ++A Sbjct: 667 PAPPMPPVSAGPPLPPPPPPPPPLPPPSSA 696 Score = 28.1 bits (61), Expect = 9.6 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 171 GPPPPLPPPVPG---PPAPSSSVGPGAS 195 G PPP PPP PG PP P G G+S Sbjct: 717 GGPPPAPPP-PGLAPPPPPGLFFGLGSS 743 >gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] Length = 337 Score = 40.0 bits (92), Expect = 0.002 Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Query: 162 GVSSTGAT--AGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRT--SVLRS 215 G ++ AT AGPPP PPP P PP S PG P AA + A LR +V+RS Sbjct: 30 GAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLPLPPGAAGSPAVLREAVEAVVRS 87 >gi|156071470 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 [Homo sapiens] Length = 889 Score = 39.7 bits (91), Expect = 0.003 Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 7/48 (14%) Query: 165 STGATAGP-PPPLPPPV------PGPPAPSSSVGPGASPPSTAARTWA 205 S GAT P PPP PPP P PP P+ GPG +PP R A Sbjct: 13 SPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEA 60 Score = 35.8 bits (81), Expect = 0.046 Identities = 15/29 (51%), Positives = 15/29 (51%) Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTA 200 PPPP PPP PGP P A PP A Sbjct: 38 PPPPAPPPGPGPAPPQHPPRAEALPPEAA 66 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Query: 173 PPPLPPPV---PGPPAPSSSVGPGASP 196 PPP P P PGPP P+S G ASP Sbjct: 761 PPPGPAPAAASPGPPPPASPPGAPASP 787 Score = 30.4 bits (67), Expect = 1.9 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Query: 147 MMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASP 196 + + SP RL R G + A+ GPPPP P P AP+S P SP Sbjct: 750 LALGSP-RLVRRPPPGPAPAAASPGPPPPASP----PGAPASPRAPRTSP 794 Score = 28.9 bits (63), Expect = 5.6 Identities = 13/25 (52%), Positives = 13/25 (52%) Query: 177 PPPVPGPPAPSSSVGPGASPPSTAA 201 PPP P P A S P ASPP A Sbjct: 761 PPPGPAPAAASPGPPPPASPPGAPA 785 >gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sapiens] Length = 505 Score = 39.7 bits (91), Expect = 0.003 Identities = 20/45 (44%), Positives = 20/45 (44%) Query: 163 VSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATL 207 V G A PPPP PPP PGPP P G T A A L Sbjct: 365 VLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGNKAAL 409 Score = 35.8 bits (81), Expect = 0.046 Identities = 15/27 (55%), Positives = 16/27 (59%) Query: 171 GPPPPLPPPVPGPPAPSSSVGPGASPP 197 GPPPP PPP P P + G GA PP Sbjct: 286 GPPPPPPPPHNSGPPPPPARGRGAPPP 312 Score = 32.3 bits (72), Expect = 0.51 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Query: 166 TGATAGPPPPLPP-----PVPGPPAPSSSVGPGASPP 197 + A +GPPPP P PV PP P PG PP Sbjct: 352 SSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 4/30 (13%) Query: 172 PPPPLPPPVP-GPPAPSSSV---GPGASPP 197 PPP LP P GPP P SV GP A PP Sbjct: 346 PPPALPSSAPSGPPPPPPSVLGVGPVAPPP 375 Score = 30.4 bits (67), Expect = 1.9 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 14/47 (29%) Query: 165 STGATAGPPPP--------LPPPVPG------PPAPSSSVGPGASPP 197 S TA PPPP +PPP P PPA SS G PP Sbjct: 315 SRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPP 361 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 7/41 (17%) Query: 164 SSTGATAGPPPPL---PPPVP----GPPAPSSSVGPGASPP 197 S G PPPP PPP P G P P S P A+PP Sbjct: 283 SRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPP 323 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/38 (39%), Positives = 16/38 (42%) Query: 167 GATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTW 204 G A PPPP P PP P S A PP R + Sbjct: 306 GRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMY 343 Score = 28.1 bits (61), Expect = 9.6 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASP--PSTA 200 A PPPP P V PP P + + P P PS+A Sbjct: 320 AAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSA 354 >gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] Length = 1682 Score = 39.7 bits (91), Expect = 0.003 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 7/63 (11%) Query: 151 SPSRLQIRCCMGVSSTGATAG---PPPPLPPPVPGPPAPSSSV-GPGASPP--STAARTW 204 SP + R C TG G PPPPLPPP P PP P + G SPP T W Sbjct: 224 SPGGKRRRGCNS-EQTGLPPGLPLPPPPLPPPPPPPPPPPPPLPGLATSPPFQLTKPGLW 282 Query: 205 ATL 207 +TL Sbjct: 283 STL 285 Score = 34.3 bits (77), Expect = 0.13 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 8/51 (15%) Query: 169 TAGPPPPLPPPVP------GPPAPSSSVGPGAS--PPSTAARTWATLRRTS 211 T GPP P PPP+P GPPA SVG S PP+ T ++ S Sbjct: 508 TEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNSNS 558 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 172 PPPPLPPPVP--GPPAPSSSVGPGASPPSTAA 201 PPP LPPP P P PS P PPS A+ Sbjct: 771 PPPALPPPPPLAKFPPPSQPQPPPPPPPSPAS 802 Score = 29.3 bits (64), Expect = 4.3 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWA 205 L +AS Q C G + +T P P PGPP+ G A PP++AA + Sbjct: 804 LKSLASVLEGQKYCYRGTGAAVSTRPGPLPTTQYSPGPPS-----GATALPPTSAAPSAQ 858 Query: 206 TLRRTSVLRSDHFFLTSGSSLRQ 228 + S S F + G R+ Sbjct: 859 GSPQPSASSSSQFSTSGGPWARE 881 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 167 GATAGPPPPLPPPVPGPPAPSSS-VGPGASPPSTAAR 202 GA+ PP P P P PAPS+ P AS P AR Sbjct: 1040 GASKAKPPTAPAP-PSAPAPSAQPTPPSASVPGKKAR 1075 >gi|11386183 WAS protein family, member 2 [Homo sapiens] Length = 498 Score = 39.7 bits (91), Expect = 0.003 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 166 TGATAGPPPPLPPPVPGPPAPSSSVGPGASPP--STAARTWATLRRTSVLRSDHF-FLTS 222 TG PPPP PPP P PP + + G A PP S + ++L S RSD + Sbjct: 387 TGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLSDTTKPKSSLPAVSDARSDLLSAIRQ 446 Query: 223 GSSLRQV 229 G LR+V Sbjct: 447 GFQLRRV 453 Score = 32.3 bits (72), Expect = 0.51 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 4/32 (12%) Query: 170 AGPPPPLPPPVPG----PPAPSSSVGPGASPP 197 A PPPP PPP PP P S GA PP Sbjct: 362 AAPPPPPPPPAADYPTLPPPPLSQPTGGAPPP 393 Score = 32.0 bits (71), Expect = 0.67 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 5/33 (15%) Query: 170 AGPPPPLPPP-----VPGPPAPSSSVGPGASPP 197 A PP P PPP +P PP P PG PP Sbjct: 317 APPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPP 349 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 7/33 (21%) Query: 173 PPPLPPPVPGPPAPSSSVG-------PGASPPS 198 PPP PPP+ G P P VG P SPPS Sbjct: 322 PPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPS 354 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Query: 172 PPPPLPPPVPG-PPAPSSSVGPGASPP 197 PPPPL P G PP P PG PP Sbjct: 379 PPPPLSQPTGGAPPPPPPPPPPGPPPP 405 Score = 29.6 bits (65), Expect = 3.3 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%) Query: 167 GATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTA 200 G+ PPPP PP PP P + P PP A Sbjct: 342 GSPGTPPPPSPPSF--PPHPDFAAPPPPPPPPAA 373 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 164 SSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPP 197 SS + + PPP PP+ PP P P +PP Sbjct: 292 SSVVSPSHPPPA--PPLGSPPGPKPGFAPPPAPP 323 >gi|11415052 retinoid X receptor, beta [Homo sapiens] Length = 533 Score = 39.3 bits (90), Expect = 0.004 Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 3/35 (8%) Query: 167 GATAGPPPPLPPPVPGPPAP--SSSVG-PGASPPS 198 G+ A PPPP+PPP G P P SSS+G PG PP+ Sbjct: 115 GSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPA 149 Score = 33.1 bits (74), Expect = 0.30 Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 171 GPPPPLPPPVPGPPAPSSSVGPGASPP 197 G PPP PP P PP+ + S+G +PP Sbjct: 94 GVPPPSPPGPPLPPSTAPSLGGSGAPP 120 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Query: 163 VSSTGATAGPPPPLPPPVPGP---PAPSSSV---GPGASPP 197 +SS+ + G PPP PP GP P +S+V G G+ PP Sbjct: 136 ISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPP 176 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 9/45 (20%) Query: 162 GVSSTGATAGPPPPLPPPV-----PGPPAPSSSV----GPGASPP 197 G S + P PLP V PGPP P S+ G GA PP Sbjct: 77 GRDSRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPP 121 Score = 28.1 bits (61), Expect = 9.6 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 9/38 (23%) Query: 163 VSSTGATAGPPPPLPPPVPG------PPAPSSSVGPGA 194 VS G +GPP + PPV G PP P GPGA Sbjct: 166 VSLPGGGSGPPEDVKPPVLGVRGLHCPPPPG---GPGA 200 >gi|23592232 mediator complex subunit 19 [Homo sapiens] Length = 194 Score = 39.3 bits (90), Expect = 0.004 Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 6/41 (14%) Query: 167 GATAGPPPPL------PPPVPGPPAPSSSVGPGASPPSTAA 201 GA A PPPP P P PP P + GPG +PP TAA Sbjct: 9 GAQADPPPPPTALGFGPGKPPPPPPPPAGGGPGTAPPPTAA 49 >gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] Length = 1240 Score = 39.3 bits (90), Expect = 0.004 Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 5/36 (13%) Query: 167 GATAGPPPPLPPPVPG-----PPAPSSSVGPGASPP 197 GA A P PPLPPP+PG PP P G G PP Sbjct: 467 GAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPP 502 Score = 32.3 bits (72), Expect = 0.51 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 14/61 (22%) Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLP-----PPVPGPPAPSSSVG----PGASP 196 ++ V+ P L+ + +ST PPP LP PP P PP P SVG P A P Sbjct: 405 ILKVSQPRALEQQ-----ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPP 459 Query: 197 P 197 P Sbjct: 460 P 460 Score = 31.6 bits (70), Expect = 0.87 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 4/30 (13%) Query: 172 PPPPLP----PPVPGPPAPSSSVGPGASPP 197 PPPPLP PP P P P GP PP Sbjct: 490 PPPPLPGLGCPPPPPPLLPGMGWGPPPPPP 519 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 5/27 (18%) Query: 165 STGATAGPPPPLPPPVPG-----PPAP 186 S GA A P P PPP+PG PPAP Sbjct: 448 SVGAKALPTAPPPPPLPGLGAMAPPAP 474 Score = 28.9 bits (63), Expect = 5.6 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 10/35 (28%) Query: 172 PPPPLPPPVPG----------PPAPSSSVGPGASP 196 PPPP PPP+P PP P +G A P Sbjct: 438 PPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPP 472 >gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] Length = 1249 Score = 39.3 bits (90), Expect = 0.004 Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 5/36 (13%) Query: 167 GATAGPPPPLPPPVPG-----PPAPSSSVGPGASPP 197 GA A P PPLPPP+PG PP P G G PP Sbjct: 467 GAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPP 502 Score = 32.3 bits (72), Expect = 0.51 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 14/61 (22%) Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLP-----PPVPGPPAPSSSVG----PGASP 196 ++ V+ P L+ + +ST PPP LP PP P PP P SVG P A P Sbjct: 405 ILKVSQPRALEQQ-----ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPP 459 Query: 197 P 197 P Sbjct: 460 P 460 Score = 31.6 bits (70), Expect = 0.87 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 4/30 (13%) Query: 172 PPPPLP----PPVPGPPAPSSSVGPGASPP 197 PPPPLP PP P P P GP PP Sbjct: 490 PPPPLPGLGCPPPPPPLLPGMGWGPPPPPP 519 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 5/27 (18%) Query: 165 STGATAGPPPPLPPPVPG-----PPAP 186 S GA A P P PPP+PG PPAP Sbjct: 448 SVGAKALPTAPPPPPLPGLGAMAPPAP 474 Score = 28.9 bits (63), Expect = 5.6 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 10/35 (28%) Query: 172 PPPPLPPPVPG----------PPAPSSSVGPGASP 196 PPPP PPP+P PP P +G A P Sbjct: 438 PPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPP 472 >gi|13273315 homeobox B4 [Homo sapiens] Length = 251 Score = 39.3 bits (90), Expect = 0.004 Identities = 17/30 (56%), Positives = 18/30 (60%) Query: 171 GPPPPLPPPVPGPPAPSSSVGPGASPPSTA 200 GPPPP PPP P PP P S A PP+ A Sbjct: 72 GPPPPPPPPPPPPPPPGLSPRAPAPPPAGA 101 Score = 35.0 bits (79), Expect = 0.079 Identities = 17/43 (39%), Positives = 18/43 (41%) Query: 158 RCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTA 200 R V A P PP PPP P PP P + P A P A Sbjct: 57 RAACTVQRYAACRDPGPPPPPPPPPPPPPPPGLSPRAPAPPPA 99 >gi|41152235 ubiquitin specific protease 51 [Homo sapiens] Length = 711 Score = 38.9 bits (89), Expect = 0.005 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 9/48 (18%) Query: 164 SSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTS 211 S G +A PPPP PP P PP P PP+ R W RR S Sbjct: 116 SQPGLSAPPPPPARPPPPPPPPP---------PPAPRPRAWRGSRRRS 154 Score = 28.9 bits (63), Expect = 5.6 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Query: 154 RLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAP 186 R + R G+S+ PPP PPP P PPAP Sbjct: 111 RARSRSQPGLSAPPPPPARPPPPPPP-PPPPAP 142 >gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] Length = 380 Score = 38.1 bits (87), Expect = 0.009 Identities = 17/36 (47%), Positives = 18/36 (50%) Query: 163 VSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPS 198 VS+ G PP PPP PGPP P P PPS Sbjct: 156 VSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPS 191 Score = 36.6 bits (83), Expect = 0.027 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 9/45 (20%) Query: 162 GVSSTGATAGPPPPLPPPVPGPP---------APSSSVGPGASPP 197 G + A PPPP PPP PGPP P+++ G G PP Sbjct: 161 GPPAPPAGGPPPPPGPPPPPGPPPPPGLPPSGVPAAAHGAGGGPP 205 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 162 GVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTS 211 GV + AG PP PP+P P G +P AA A LR+ S Sbjct: 192 GVPAAAHGAGGGPPPAPPLPAAQGPGG--GGAGAPGLAAAIAGAKLRKVS 239 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 171 GPPPPLPPPVPGPPAPSSSV--GPGASPPSTAAR 202 GPPPP P G PA + GP +PP AA+ Sbjct: 181 GPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQ 214 >gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD subunit [Homo sapiens] Length = 551 Score = 37.7 bits (86), Expect = 0.012 Identities = 16/31 (51%), Positives = 17/31 (54%) Query: 169 TAGPPPPLPPPVPGPPAPSSSVGPGASPPST 199 T PPP LP P PG P P+ V P PP T Sbjct: 336 TLAPPPHLPGPPPGAPPPAPHVNPAFFPPPT 366 Score = 33.1 bits (74), Expect = 0.30 Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 5/27 (18%) Query: 171 GPPPPLPPPVPGPPAPSSSVGPGASPP 197 GPPP PPP GPP P PG PP Sbjct: 304 GPPPGPPPPQQGPPPP-----PGPFPP 325 Score = 32.0 bits (71), Expect = 0.67 Identities = 13/24 (54%), Positives = 13/24 (54%) Query: 174 PPLPPPVPGPPAPSSSVGPGASPP 197 PPL P PGPP P GP PP Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPP 310 Score = 31.2 bits (69), Expect = 1.1 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 16/48 (33%) Query: 171 GPPPPLP-------PPV--PGPPAPSSSVGPG-------ASPPSTAAR 202 GPPPP P PP+ PGPP P PG A PP+ R Sbjct: 225 GPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDR 272 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%) Query: 167 GATAGPPPPLP-PPVPGPPAPSSSVGPGASPP 197 G G PP P PP P PP P PG PP Sbjct: 281 GQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Query: 163 VSSTGATAGPPPPLP-PPVPGPPAPSSSVGPGASPPSTAA 201 V G GPPPP PP P P P GP PP T A Sbjct: 300 VPGYGPPPGPPPPQQGPPPPPGPFPPRPPGP-LGPPLTLA 338 Score = 28.1 bits (61), Expect = 9.6 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%) Query: 171 GP-PPPLPPPVPGPPAPSSSVGPGASPP 197 GP PP PPPVPG P P PP Sbjct: 290 GPLPPGPPPPVPGYGPPPGPPPPQQGPP 317 Score = 28.1 bits (61), Expect = 9.6 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 12/40 (30%) Query: 171 GPPPPL---PPPVPGPPAPSSSVG---------PGASPPS 198 GPPPP PP PGP P ++ PGA PP+ Sbjct: 315 GPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPA 354 >gi|39812378 RAN binding protein 9 [Homo sapiens] Length = 729 Score = 37.7 bits (86), Expect = 0.012 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 4/31 (12%) Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPS 198 ATA PPPP PP PP P+S+ P + PP+ Sbjct: 78 ATAAPPPPPPP----PPPPASAAAPASGPPA 104 Score = 33.1 bits (74), Expect = 0.30 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 9/45 (20%) Query: 165 STGATAGPPPPLPP------PVPGPPAP---SSSVGPGASPPSTA 200 +T A PPPP PP P GPPAP ++ GP P+ A Sbjct: 78 ATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPA 122 >gi|4507691 transformation/transcription domain-associated protein [Homo sapiens] Length = 3830 Score = 37.4 bits (85), Expect = 0.016 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 5/41 (12%) Query: 162 GVSSTGATAGPPP-----PLPPPVPGPPAPSSSVGPGASPP 197 GV + A GP P P PPP P PP P++ V P PP Sbjct: 486 GVPTAPAAPGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPP 526 >gi|19924103 synapsin II isoform IIa [Homo sapiens] Length = 582 Score = 37.4 bits (85), Expect = 0.016 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%) Query: 172 PPPPLPPPVPGPPA-------PSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGS 224 P P PPP PGP A P++S GP PP +A SV FF + Sbjct: 31 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSV--GSSFFSSLSQ 88 Query: 225 SLRQVATALTLLRMPCQAALLAAR 248 +++Q A + L+ P A A + Sbjct: 89 AVKQTAASAGLVDAPAPAPAAARK 112 >gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] Length = 1126 Score = 37.4 bits (85), Expect = 0.016 Identities = 17/34 (50%), Positives = 17/34 (50%) Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201 AT PPP PPP P PPAP P PS A Sbjct: 646 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 679 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 163 VSSTGATAGPPPPLPPPVPGP-----PAPSSSVGPGASPPSTAARTWATLRRTSVLR 214 + +T PPPP PPP P P P P S G SP + + TSV++ Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 700 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 14/79 (17%) Query: 139 ISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSS--------- 189 + V G M P+ G ++T TAGP P P P P PS + Sbjct: 547 VLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 606 Query: 190 -----VGPGASPPSTAART 203 GPGA A+ T Sbjct: 607 NLLGPAGPGAGGSGVASPT 625 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%) Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGP-----PAPSS----SVGPGASP 196 L A P ++ + + ++ G P P P PGP APSS S GA P Sbjct: 364 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 423 Query: 197 PSTA 200 P A Sbjct: 424 PGPA 427 >gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] Length = 1126 Score = 37.4 bits (85), Expect = 0.016 Identities = 17/34 (50%), Positives = 17/34 (50%) Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201 AT PPP PPP P PPAP P PS A Sbjct: 646 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 679 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 163 VSSTGATAGPPPPLPPPVPGP-----PAPSSSVGPGASPPSTAARTWATLRRTSVLR 214 + +T PPPP PPP P P P P S G SP + + TSV++ Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 700 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 14/79 (17%) Query: 139 ISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSS--------- 189 + V G M P+ G ++T TAGP P P P P PS + Sbjct: 547 VLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 606 Query: 190 -----VGPGASPPSTAART 203 GPGA A+ T Sbjct: 607 NLLGPAGPGAGGSGVASPT 625 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%) Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGP-----PAPSS----SVGPGASP 196 L A P ++ + + ++ G P P P PGP APSS S GA P Sbjct: 364 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 423 Query: 197 PSTA 200 P A Sbjct: 424 PGPA 427 >gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] Length = 1126 Score = 37.4 bits (85), Expect = 0.016 Identities = 17/34 (50%), Positives = 17/34 (50%) Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201 AT PPP PPP P PPAP P PS A Sbjct: 646 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 679 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 163 VSSTGATAGPPPPLPPPVPGP-----PAPSSSVGPGASPPSTAARTWATLRRTSVLR 214 + +T PPPP PPP P P P P S G SP + + TSV++ Sbjct: 644 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 700 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 14/79 (17%) Query: 139 ISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSS--------- 189 + V G M P+ G ++T TAGP P P P P PS + Sbjct: 547 VLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 606 Query: 190 -----VGPGASPPSTAART 203 GPGA A+ T Sbjct: 607 NLLGPAGPGAGGSGVASPT 625 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%) Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGP-----PAPSS----SVGPGASP 196 L A P ++ + + ++ G P P P PGP APSS S GA P Sbjct: 364 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 423 Query: 197 PSTA 200 P A Sbjct: 424 PGPA 427 >gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] Length = 1132 Score = 37.4 bits (85), Expect = 0.016 Identities = 17/34 (50%), Positives = 17/34 (50%) Query: 168 ATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201 AT PPP PPP P PPAP P PS A Sbjct: 652 ATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 685 Score = 33.1 bits (74), Expect = 0.30 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 163 VSSTGATAGPPPPLPPPVPGP-----PAPSSSVGPGASPPSTAARTWATLRRTSVLR 214 + +T PPPP PPP P P P P S G SP + + TSV++ Sbjct: 650 LQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESLSPEFFTSVVQ 706 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 14/79 (17%) Query: 139 ISVVLGRLMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSS--------- 189 + V G M P+ G ++T TAGP P P P P PS + Sbjct: 553 VLVAQGTPGMAPPPAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLG 612 Query: 190 -----VGPGASPPSTAART 203 GPGA A+ T Sbjct: 613 NLLGPAGPGAGGSGVASPT 631 Score = 28.5 bits (62), Expect = 7.4 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 9/64 (14%) Query: 146 LMMVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGP-----PAPSS----SVGPGASP 196 L A P ++ + + ++ G P P P PGP APSS S GA P Sbjct: 370 LQQAAIPIQINVGTTVTMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPP 429 Query: 197 PSTA 200 P A Sbjct: 430 PGPA 433 >gi|19924101 synapsin II isoform IIb [Homo sapiens] Length = 478 Score = 37.4 bits (85), Expect = 0.016 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%) Query: 172 PPPPLPPPVPGPPA-------PSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGS 224 P P PPP PGP A P++S GP PP +A SV FF + Sbjct: 31 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSV--GSSFFSSLSQ 88 Query: 225 SLRQVATALTLLRMPCQAALLAAR 248 +++Q A + L+ P A A + Sbjct: 89 AVKQTAASAGLVDAPAPAPAAARK 112 >gi|47132519 Ras association and pleckstrin homology domains 1 isoform 1 [Homo sapiens] Length = 1250 Score = 37.4 bits (85), Expect = 0.016 Identities = 18/53 (33%), Positives = 26/53 (49%) Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTAARTWATLRRTSVLRSDHFFLTSGS 224 PPPP PPP P PP P P S PS + ++ +++ R + SG+ Sbjct: 630 PPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGA 682 Score = 33.1 bits (74), Expect = 0.30 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Query: 172 PPPPLPPPVPGPPAPSSSVGPGASP-PSTAA 201 P PPLPPP P PP P P P PS +A Sbjct: 624 PSPPLPPPPPPPPPPPPPPPPPPPPLPSQSA 654 Score = 31.6 bits (70), Expect = 0.87 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 6/41 (14%) Query: 163 VSSTGATAGPPPPLPPPVPG------PPAPSSSVGPGASPP 197 V G PPPP PPP PG PAP + P S P Sbjct: 703 VPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAP 743 Score = 31.2 bits (69), Expect = 1.1 Identities = 14/35 (40%), Positives = 16/35 (45%) Query: 166 TGATAGPPPPLPPPVPGPPAPSSSVGPGASPPSTA 200 T + PP P PPP P PP P P P +A Sbjct: 620 TASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSA 654 Score = 30.8 bits (68), Expect = 1.5 Identities = 12/27 (44%), Positives = 15/27 (55%) Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPS 198 PPPP PPP P P + + + P PS Sbjct: 710 PPPPPPPPPPTPGSAMAQLKPAPCAPS 736 Score = 30.8 bits (68), Expect = 1.5 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 9/31 (29%) Query: 173 PPPLPPPVPGPPAPSSSVGPGASPPSTAART 203 PPP P PVP PP P PP TA+ T Sbjct: 928 PPPPPSPVPAPPPP---------PPPTASPT 949 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 170 AGPPPPLPPPVPGPPAPSSSVGPGAS-PPSTAARTWA 205 A P PP PPP+P P P + P + P T+ +T A Sbjct: 759 APPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVA 795 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 5/25 (20%) Query: 172 PPPPLPPPVPGPPAPSSSVGPGASP 196 PPPP P P P PP P P ASP Sbjct: 929 PPPPSPVPAPPPPPP-----PTASP 948 Score = 30.0 bits (66), Expect = 2.5 Identities = 12/30 (40%), Positives = 14/30 (46%) Query: 172 PPPPLPPPVPGPPAPSSSVGPGASPPSTAA 201 P PP PPP P P S PG T++ Sbjct: 936 PAPPPPPPPTASPTPDKSGSPGKKTSKTSS 965 Score = 29.6 bits (65), Expect = 3.3 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 150 ASPSRLQIRCCMGVSSTGA-TAGPPPPLPPPVPGPPAPSSSVGPGASPPST 199 A P L+I ++ T PPPP+P P+P P AP + +P ST Sbjct: 742 APPPPLKIHQVQHITQVAPPTPPPPPPIPAPLP-PQAPPKPLVTIPAPTST 791 Score = 29.3 bits (64), Expect = 4.3 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 148 MVASPSRLQIRCCMGVSSTGATAGPPPPLPPPVPGPPAPSSSVGPGASPPS 198 +V P+ + V + A P PP+PP P P+S + P SPP+ Sbjct: 782 LVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPP--SPPT 830 >gi|24497589 aristaless related homeobox [Homo sapiens] Length = 562 Score = 37.4 bits (85), Expect = 0.016 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Query: 144 GRLMMVASPSRLQIRCCMGVSSTGATAGP---PPPLPPPVPGPPAPSSSVGPGASPPSTA 200 GRL+ A+ + ++T ATAGP PP PPP P G A+ + A Sbjct: 94 GRLLQGAAAAAAAAAAAAAAAAT-ATAGPRGEAPPPPPPTARPGERPDGAGAAAAAAAAA 152 Query: 201 ARTWATLR 208 A W TL+ Sbjct: 153 AAAWDTLK 160 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.132 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,065,727 Number of Sequences: 37866 Number of extensions: 718294 Number of successful extensions: 23061 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 584 Number of HSP's successfully gapped in prelim test: 506 Number of HSP's that attempted gapping in prelim test: 11419 Number of HSP's gapped (non-prelim): 8377 length of query: 295 length of database: 18,247,518 effective HSP length: 102 effective length of query: 193 effective length of database: 14,385,186 effective search space: 2776340898 effective search space used: 2776340898 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.