Guide to the Human Genome
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Name: MED19 Sequence: fasta or formatted (194aa) NCBI GI: 23592232
Description:

mediator complex subunit 19

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         13           2
 C cysteine            1.5          3           1
 D aspartate           3.1          6           1
 E glutamate           3.6          7           1
 F phenylalanine       4.1          8           1
 G glycine            10.8         21           3
 H histidine           3.1          6           1
 I isoleucine          3.1          6           1
 K lysine              7.7         15           3
 L leucine             9.3         18           1
 M methionine          2.6          5           1
 N asparagine          4.1          8           1
 P proline            18.6         36           8
 Q glutamine           3.1          6           1
 R arginine            2.6          5           1
 S serine              6.7         13           3
 T threonine           6.7         13           1
 V valine              1.0          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mediator complex subunit 19 
WASL                  0.074   Wiskott-Aldrich syndrome gene-like protein 
WAS                   0.074   Wiskott-Aldrich syndrome protein 
WASF2                 0.069   WAS protein family, member 2 
DAAM1                 0.069   dishevelled-associated activator of morphogenesis 1 ...
DIAPH1                0.066   diaphanous 1 isoform 2 
DIAPH1                0.066   diaphanous 1 isoform 1 
RANBP9                0.066   RAN binding protein 9 
FHDC1                 0.064   FH2 domain containing 1 
ZCCHC2                0.064   zinc finger, CCHC domain containing 2 
FMNL1                 0.064   formin-like 1 
FMN1                  0.064   formin 1 
HCN2                  0.061   hyperpolarization activated cyclic nucleotide-gated...
SETD1B                0.059   SET domain containing 1B 
APBB1IP               0.056   amyloid beta (A4) precursor protein-binding, family ...
DIAPH2                0.056   diaphanous 2 isoform 12C 
DIAPH2                0.056   diaphanous 2 isoform 156 
INF2                  0.056   inverted formin 2 isoform 2 
INF2                  0.056   inverted formin 2 isoform 1 
SMR3B                 0.056   submaxillary gland androgen regulated protein 3 homol...
ENAH                  0.054   enabled homolog isoform a 
ENAH                  0.054   enabled homolog isoform b 
LMTK3                 0.054   lemur tyrosine kinase 3 
VASP                  0.051   vasodilator-stimulated phosphoprotein 
DIAPH3                0.051   diaphanous homolog 3 isoform b 
DIAPH3                0.051   diaphanous homolog 3 isoform a 
SMR3A                 0.051   submaxillary gland androgen regulated protein 3 homo...
FUSSEL18              0.051   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.051   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.051   PREDICTED: functional smad suppressing element 18 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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