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Search of human proteins with 10835073
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10835073 N-myristoyltransferase 1 [Homo sapiens]
(496 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10835073 N-myristoyltransferase 1 [Homo sapiens] 1024 0.0
gi|4758816 N-myristoyltransferase 2 [Homo sapiens] 759 0.0
gi|7662322 thymus high mobility group box protein TOX [Homo sapi... 44 3e-04
gi|149408146 TOX high mobility group box family member 2 isoform... 42 0.001
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap... 40 0.005
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap... 40 0.005
gi|149408144 TOX high mobility group box family member 2 isoform... 40 0.006
gi|149408141 TOX high mobility group box family member 2 isoform... 40 0.006
gi|14249636 TOX high mobility group box family member 2 isoform ... 40 0.006
gi|226246533 TOX high mobility group box family member 3 isoform... 37 0.032
gi|226054295 TOX high mobility group box family member 3 isoform... 37 0.032
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 37 0.054
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 36 0.092
gi|9257180 adducin 2 isoform c [Homo sapiens] 35 0.16
gi|9257192 adducin 2 isoform a [Homo sapiens] 35 0.16
gi|13376245 zinc finger protein 403 [Homo sapiens] 35 0.21
gi|223555917 metadherin [Homo sapiens] 33 0.60
gi|50962882 G patch domain containing 8 [Homo sapiens] 33 0.60
gi|46399200 testis-specific bromodomain protein [Homo sapiens] 32 1.0
gi|46399198 testis-specific bromodomain protein [Homo sapiens] 32 1.0
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 32 1.3
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 32 1.3
gi|6005872 SEC63-like protein [Homo sapiens] 32 1.3
gi|153945755 zinc finger protein 608 [Homo sapiens] 32 1.3
gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ... 32 1.3
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 32 1.3
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 32 1.3
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 32 1.3
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 32 1.3
gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo s... 32 1.3
>gi|10835073 N-myristoyltransferase 1 [Homo sapiens]
Length = 496
Score = 1024 bits (2648), Expect = 0.0
Identities = 496/496 (100%), Positives = 496/496 (100%)
Query: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60
MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK
Sbjct: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60
Query: 61 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120
QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW
Sbjct: 61 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFW 120
Query: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180
DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY
Sbjct: 121 DTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENY 180
Query: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240
VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK
Sbjct: 181 VEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEK 240
Query: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300
KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS
Sbjct: 241 KMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRS 300
Query: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360
LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF
Sbjct: 301 LNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQF 360
Query: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420
HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY
Sbjct: 361 HLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAY 420
Query: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480
SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN
Sbjct: 421 SFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480
Query: 481 WKCPSMGAEKVGLVLQ 496
WKCPSMGAEKVGLVLQ
Sbjct: 481 WKCPSMGAEKVGLVLQ 496
>gi|4758816 N-myristoyltransferase 2 [Homo sapiens]
Length = 498
Score = 759 bits (1959), Expect = 0.0
Identities = 372/508 (73%), Positives = 426/508 (83%), Gaps = 22/508 (4%)
Query: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCS-DCENEEDNSYNRGGLSPANDTGAKKKKK 59
MA++SE+A + L + + C D +NEE+ + +G SP GAKKKKK
Sbjct: 1 MAEDSESAASQQSLEL--------DDQDTCGIDGDNEEETEHAKG--SPGGYLGAKKKKK 50
Query: 60 KQKKKKEK----GSETDSAQD-------QPVKMNSLPAERIQEIQKAIELFSVGQGPAKT 108
KQK+KKEK G+++DSA D QP K S+P +++Q+IQ+A+EL S QGPA+
Sbjct: 51 KQKRKKEKPNSGGTKSDSASDSQEIKIQQPSKNPSVPMQKLQDIQRAMELLSACQGPARN 110
Query: 109 MEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGV 168
++EA+K YQFWDTQPVPKL EV+ +HG +EPDKDN+RQEPY+LPQGF WD LDL D V
Sbjct: 111 IDEAAKHRYQFWDTQPVPKLDEVITSHGAIEPDKDNVRQEPYSLPQGFMWDTLDLSDAEV 170
Query: 169 LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISA 228
LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWL QWHCGVRV S++KLVGFISA
Sbjct: 171 LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISA 230
Query: 229 IPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLP 288
IPANI IYD+ KKMVEINFLCVHKKLRSKRVAPVLIREITRRV+LEGIFQAVYTAGVVLP
Sbjct: 231 IPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLP 290
Query: 289 KPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPV 348
KP+ TCRYWHRSLNPRKL+EVKFSHLSRNMT+QRTMKLYRLP+ KT+GLRPME KDI
Sbjct: 291 KPIATCRYWHRSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKS 350
Query: 349 VHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIM 408
V +L+ YLKQFHL PVM +EEV HWF P+E+IIDTFVVE+ NG++TDFLSFYTLPST+M
Sbjct: 351 VRELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVESPNGKLTDFLSFYTLPSTVM 410
Query: 409 NHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFG 468
+HP HKSLKAAYSFYN+HT+TPLLDLMSDAL+LAK KGFDVFNALDLMENKTFLEKLKFG
Sbjct: 411 HHPAHKSLKAAYSFYNIHTETPLLDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFG 470
Query: 469 IGDGNLQYYLYNWKCPSMGAEKVGLVLQ 496
IGDGNLQYYLYNW+CP +EKVGLVLQ
Sbjct: 471 IGDGNLQYYLYNWRCPGTDSEKVGLVLQ 498
>gi|7662322 thymus high mobility group box protein TOX [Homo
sapiens]
Length = 526
Score = 43.9 bits (102), Expect = 3e-04
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 12 PAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSET 71
P+PP + + + H + E ++ + N G PA+D G K K K+KKKK+
Sbjct: 205 PSPPGSKSATPSPSSSVH--EDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKD----- 257
Query: 72 DSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWD 121
++P K S A ++ Q AI+ GQ P T E SK WD
Sbjct: 258 ---PNEPQKPVSAYALFFRDTQAAIK----GQNPNATFGEVSKIVASMWD 300
>gi|149408146 TOX high mobility group box family member 2 isoform b
[Homo sapiens]
Length = 488
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/162 (27%), Positives = 64/162 (39%), Gaps = 27/162 (16%)
Query: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYN---RGGLSPANDTGAKKK 57
M S A P+PP G+ + S EE++ + G P+ D G K K
Sbjct: 189 MGIRSSIAHSSPSPP------GSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAK 242
Query: 58 KKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSY 117
K+KKKK+ ++P K S A ++ Q AI+ GQ P+ T + SK
Sbjct: 243 NPKKKKKKD--------PNEPQKPVSAYALFFRDTQAAIK----GQNPSATFGDVSKIVA 290
Query: 118 QFWDT------QPVPKLGEVVNTHGPVEPDKDNIRQEPYTLP 153
WD+ Q P GE +T +Q Y +P
Sbjct: 291 SMWDSLGEEQKQSSPDQGETKSTQANPPAKMLPPKQPMYAMP 332
>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
sapiens]
Length = 858
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 2 ADESETAVKPPA--PPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGL-SPAN-----DTG 53
++ E + PP+ PP + + +G E S ++ E GG SP++ D G
Sbjct: 703 SESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSHLLGADHG 762
Query: 54 ---AKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTME 110
AKK KKK KK++ K + +S D K E+ QE K EL + P ++
Sbjct: 763 LRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQDKDREL-QQAELPNRSPG 821
Query: 111 EASKRSYQFWDT 122
K+ WDT
Sbjct: 822 FGIKKEKTGWDT 833
>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
sapiens]
Length = 871
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 2 ADESETAVKPPA--PPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGL-SPAN-----DTG 53
++ E + PP+ PP + + +G E S ++ E GG SP++ D G
Sbjct: 716 SESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSHLLGADHG 775
Query: 54 ---AKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTME 110
AKK KKK KK++ K + +S D K E+ QE K EL + P ++
Sbjct: 776 LRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQDKDREL-QQAELPNRSPG 834
Query: 111 EASKRSYQFWDT 122
K+ WDT
Sbjct: 835 FGIKKEKTGWDT 846
>gi|149408144 TOX high mobility group box family member 2 isoform a
[Homo sapiens]
Length = 506
Score = 39.7 bits (91), Expect = 0.006
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYN---RGGLSPANDTGAKKK 57
M S A P+PP G+ + S EE++ + G P+ D G K K
Sbjct: 180 MGIRSSIAHSSPSPP------GSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAK 233
Query: 58 KKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSY 117
K+KKKK+ ++P K S A ++ Q AI+ GQ P+ T + SK
Sbjct: 234 NPKKKKKKD--------PNEPQKPVSAYALFFRDTQAAIK----GQNPSATFGDVSKIVA 281
Query: 118 QFWDT 122
WD+
Sbjct: 282 SMWDS 286
>gi|149408141 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 39.7 bits (91), Expect = 0.006
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYN---RGGLSPANDTGAKKK 57
M S A P+PP G+ + S EE++ + G P+ D G K K
Sbjct: 138 MGIRSSIAHSSPSPP------GSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAK 191
Query: 58 KKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSY 117
K+KKKK+ ++P K S A ++ Q AI+ GQ P+ T + SK
Sbjct: 192 NPKKKKKKD--------PNEPQKPVSAYALFFRDTQAAIK----GQNPSATFGDVSKIVA 239
Query: 118 QFWDT 122
WD+
Sbjct: 240 SMWDS 244
>gi|14249636 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 39.7 bits (91), Expect = 0.006
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYN---RGGLSPANDTGAKKK 57
M S A P+PP G+ + S EE++ + G P+ D G K K
Sbjct: 138 MGIRSSIAHSSPSPP------GSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAK 191
Query: 58 KKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSY 117
K+KKKK+ ++P K S A ++ Q AI+ GQ P+ T + SK
Sbjct: 192 NPKKKKKKD--------PNEPQKPVSAYALFFRDTQAAIK----GQNPSATFGDVSKIVA 239
Query: 118 QFWDT 122
WD+
Sbjct: 240 SMWDS 244
>gi|226246533 TOX high mobility group box family member 3 isoform 2
[Homo sapiens]
Length = 571
Score = 37.4 bits (85), Expect = 0.032
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 35 NEED-NSYNR--GGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQE 91
NEED + NR G A D+G K K K+KKKK+ ++P K S A ++
Sbjct: 212 NEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKD--------PNEPQKPVSAYALFFRD 263
Query: 92 IQKAIELFSVGQGPAKTMEEASKRSYQFWDT 122
Q AI+ GQ P T E SK WD+
Sbjct: 264 TQAAIK----GQNPNATFGEVSKIVASMWDS 290
>gi|226054295 TOX high mobility group box family member 3 isoform 1
[Homo sapiens]
Length = 576
Score = 37.4 bits (85), Expect = 0.032
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 35 NEED-NSYNR--GGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQE 91
NEED + NR G A D+G K K K+KKKK+ ++P K S A ++
Sbjct: 217 NEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKD--------PNEPQKPVSAYALFFRD 268
Query: 92 IQKAIELFSVGQGPAKTMEEASKRSYQFWDT 122
Q AI+ GQ P T E SK WD+
Sbjct: 269 TQAAIK----GQNPNATFGEVSKIVASMWDS 295
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 36.6 bits (83), Expect = 0.054
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 44 GGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQ 103
G LSP D G K +K +KKK+ A P + +LP+E A L + +
Sbjct: 2030 GPLSPRKDAGRAKDRKDPRKKKKGKEAGPGAGLPPPRAPALPSE--ARAPHASSLTAAKR 2087
Query: 104 GPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQG 155
AK + K+ + V KL E + EP++D+ E LP+G
Sbjct: 2088 SKAKAKGKEVKKENR-GKGGAVSKLMESMAAEEDFEPNQDSSFSEDEHLPRG 2138
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 35.8 bits (81), Expect = 0.092
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 34 ENEEDNSYNRGGLSPANDTGA--------KKKKKKQKKKKEKGSETDSAQDQPVKMNSLP 85
+ E+D RG + ++ G KKK ++K+KK KG S ++ +
Sbjct: 970 KKEDDVGIERGNIETTSEDGQVFSPKKGQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKR 1029
Query: 86 AERIQEIQKAIELFSVGQGPAKTMEEASKR---SYQFWDTQPVPKLGEV 131
R I EL + G +E++ K+ ++ W + VP EV
Sbjct: 1030 GPRTPPITTKEELVEMCNGKNGILEDSQKKEDTAFSDWSDEDVPDRTEV 1078
>gi|9257180 adducin 2 isoform c [Homo sapiens]
Length = 420
Score = 35.0 bits (79), Expect = 0.16
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 57 KKKKQKKKKEKGSETDSAQDQPVK-MNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKR 115
KK+ ++KK E E ++A ++P S PA +Q K E S P+K++EE +K+
Sbjct: 263 KKEVERKKLELDGEKETAPEEPGSPAKSAPASPVQSPAKEAETKSPLVSPSKSLEEGTKK 322
Query: 116 S 116
+
Sbjct: 323 T 323
>gi|9257192 adducin 2 isoform a [Homo sapiens]
Length = 726
Score = 35.0 bits (79), Expect = 0.16
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 57 KKKKQKKKKEKGSETDSAQDQPVK-MNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKR 115
KK+ ++KK E E ++A ++P S PA +Q K E S P+K++EE +K+
Sbjct: 569 KKEVERKKLELDGEKETAPEEPGSPAKSAPASPVQSPAKEAETKSPLVSPSKSLEEGTKK 628
Query: 116 S 116
+
Sbjct: 629 T 629
>gi|13376245 zinc finger protein 403 [Homo sapiens]
Length = 697
Score = 34.7 bits (78), Expect = 0.21
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 22 GNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSE 70
G+ + HC D E++ D+ S NDT K KKKK+K K K E
Sbjct: 498 GDDSCVHHCEDKEDDGDSCVECWANSEENDTKGKNKKKKKKSKILKCDE 546
>gi|223555917 metadherin [Homo sapiens]
Length = 582
Score = 33.1 bits (74), Expect = 0.60
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Query: 35 NEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSETDSAQD----QPVKMNSLPAERIQ 90
+++D G L TG K KKK+KKKK++G + +AQD + LP +
Sbjct: 426 SDDDKEKGEGALP----TG--KSKKKKKKKKKQGEDNSTAQDTEELEKEIREDLPVNTSK 479
Query: 91 EIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPY 150
K + FS+ KT+ + ++QP+ L +T V K + +
Sbjct: 480 TRPKQEKAFSL-----KTISTSDPAEVLVKNSQPIKTLPPATSTEPSVILSKSDSDKSSS 534
Query: 151 TLP 153
+P
Sbjct: 535 QVP 537
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 33.1 bits (74), Expect = 0.60
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 16 LPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAK-------KKKKKQKKKKEKG 68
LP E +G H H ++++ + + R + + +K KK+KK+K+KK K
Sbjct: 662 LPSKKERSGKSHRHKKKKKHKKSSKHKRKHKADTEEKSSKAESGEKSKKRKKRKRKKNKS 721
Query: 69 SETDSAQDQP 78
S ++ P
Sbjct: 722 SAPADSERGP 731
>gi|46399200 testis-specific bromodomain protein [Homo sapiens]
Length = 947
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 48 PANDTGAKKKKKKQKKKKEKGSETDS-----AQDQPVKMNSLPAERIQEIQKAIELFSVG 102
P KK+K K++KKKEK + ++ + +K S + + Q+ I L S
Sbjct: 444 PFRKLNKKKEKSKKEKKKEKVNNSNENPRKMCEQMRLKEKSKRNQPKKRKQQFIGLKSED 503
Query: 103 QGPAKTMEEASKRSYQF-WDTQPVPKLGEVVNTHGPVEPDKDN 144
+ AK M KR + P KLG VV+ EP N
Sbjct: 504 EDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSN 546
>gi|46399198 testis-specific bromodomain protein [Homo sapiens]
Length = 947
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 48 PANDTGAKKKKKKQKKKKEKGSETDS-----AQDQPVKMNSLPAERIQEIQKAIELFSVG 102
P KK+K K++KKKEK + ++ + +K S + + Q+ I L S
Sbjct: 444 PFRKLNKKKEKSKKEKKKEKVNNSNENPRKMCEQMRLKEKSKRNQPKKRKQQFIGLKSED 503
Query: 103 QGPAKTMEEASKRSYQF-WDTQPVPKLGEVVNTHGPVEPDKDN 144
+ AK M KR + P KLG VV+ EP N
Sbjct: 504 EDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSN 546
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 32.0 bits (71), Expect = 1.3
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 2 ADESETAVK--PPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKK- 58
A+E E A K P P++ E G E E EE++ G S + G +K+
Sbjct: 501 AEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDE---GAKSDQAEEGGSEKEG 557
Query: 59 --KKQKKKKEKGSETDS---AQDQPVKMNSLPAERIQEIQKAIELFSVG--QGPAKTMEE 111
+K++ ++E+G ET++ ++ K E+ +E+ EL + + P K
Sbjct: 558 SSEKEEGEQEEG-ETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSP 616
Query: 112 ASKRSYQFWDTQPVPK 127
K + PVPK
Sbjct: 617 VPKSPVEEKGKSPVPK 632
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 32.0 bits (71), Expect = 1.3
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 2 ADESETAVK--PPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKK- 58
A+E E A K P P++ E G E E EE++ G S + G +K+
Sbjct: 125 AEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDE---GAKSDQAEEGGSEKEG 181
Query: 59 --KKQKKKKEKGSETDS---AQDQPVKMNSLPAERIQEIQKAIELFSVG--QGPAKTMEE 111
+K++ ++E+G ET++ ++ K E+ +E+ EL + + P K
Sbjct: 182 SSEKEEGEQEEG-ETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSP 240
Query: 112 ASKRSYQFWDTQPVPK 127
K + PVPK
Sbjct: 241 VPKSPVEEKGKSPVPK 256
>gi|6005872 SEC63-like protein [Homo sapiens]
Length = 760
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 10 KPPAPPLPQ-----MMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKK 64
KP LPQ + NG + E+EE+ S +D+ ++ + + +
Sbjct: 535 KPTPVLLPQSKQQKQKQANGVVGNEAAVKEDEEEVS------DKGSDSEEEETNRDSQSE 588
Query: 65 KEKGSETDSAQDQPVKMNSLPAERIQEIQKAIE 97
K+ GS+ DS ++Q K N QE+Q++I+
Sbjct: 589 KDDGSDRDSDREQDEKQNKDDEAEWQELQQSIQ 621
>gi|153945755 zinc finger protein 608 [Homo sapiens]
Length = 1512
Score = 32.0 bits (71), Expect = 1.3
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 22/108 (20%)
Query: 55 KKKKKKQKKKKEKGSETDS---------AQDQPVKMNSLPAERIQEIQKAIELFSVGQGP 105
KKKK+K+K K ++G ET S +D LP +++ E + G
Sbjct: 811 KKKKEKRKLKDKEGKETGSPKMDAKLGKLEDSKGASKDLPGHFLKDHLNKNEGLANGLSE 870
Query: 106 AKTMEEASKRS-----YQFWDTQPVPKLGE--------VVNTHGPVEP 140
++ AS ++ Y F D P P +G +VN P+ P
Sbjct: 871 SQESRMASIKAEADKVYTFTDNAPSPSIGSASRLECSTLVNGQAPMAP 918
>gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a
[Homo sapiens]
Length = 326
Score = 32.0 bits (71), Expect = 1.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 9 VKPPAPPLPQMMEGNGNGHEHC-SDCENEEDNSYNRGGLSPANDT-----GAKKKKKKQK 62
++PP PP P + + HC S+ E E+D G P G K+KK+KQ+
Sbjct: 257 LRPPKPPRPASLLRHA---PHCLSEEEGEQDRPRAPGPWDPLASAAGLKEGGKRKKQKQR 313
Query: 63 KKKEKGSET 71
++ +K T
Sbjct: 314 EESKKKKST 322
>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
Length = 338
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Query: 55 KKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQ---GPAKTMEE 111
+KKKKK+KK K+KG E AQ ++ +LP + + + S G+ GP T E+
Sbjct: 216 RKKKKKRKKLKKKGKEKAEAQ----QVEALPGPSLDQWHR-----SAGEEEDGPVLTDEQ 266
Query: 112 ASK 114
S+
Sbjct: 267 KSR 269
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Query: 55 KKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQ---GPAKTMEE 111
+KKKKK+KK K+KG E AQ ++ +LP + + + S G+ GP T E+
Sbjct: 227 RKKKKKRKKLKKKGKEKAEAQ----QVEALPGPSLDQWHR-----SAGEEEDGPVLTDEQ 277
Query: 112 ASK 114
S+
Sbjct: 278 KSR 280
>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
Length = 341
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Query: 55 KKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQ---GPAKTMEE 111
+KKKKK+KK K+KG E AQ ++ +LP + + + S G+ GP T E+
Sbjct: 216 RKKKKKRKKLKKKGKEKAEAQ----QVEALPGPSLDQWHR-----SAGEEEDGPVLTDEQ 266
Query: 112 ASK 114
S+
Sbjct: 267 KSR 269
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 32.0 bits (71), Expect = 1.3
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Query: 55 KKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQ---GPAKTMEE 111
+KKKKK+KK K+KG E AQ ++ +LP + + + S G+ GP T E+
Sbjct: 235 RKKKKKRKKLKKKGKEKAEAQ----QVEALPGPSLDQWHR-----SAGEEEDGPVLTDEQ 285
Query: 112 ASK 114
S+
Sbjct: 286 KSR 288
>gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo
sapiens]
Length = 576
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 37 EDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQ 90
++N + D +K KKQKKKK+K AQD P K + LPA Q
Sbjct: 362 DENPLDDNSEEEMEDAPKQKLSKKQKKKKQK-----PAQDVPGKDSYLPAAHFQ 410
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,708,437
Number of Sequences: 37866
Number of extensions: 1010420
Number of successful extensions: 6394
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 5831
Number of HSP's gapped (non-prelim): 439
length of query: 496
length of database: 18,247,518
effective HSP length: 106
effective length of query: 390
effective length of database: 14,233,722
effective search space: 5551151580
effective search space used: 5551151580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.