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Search of human proteins with 239749442
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo
sapiens]
(269 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo ... 563 e-161
gi|239754902 PREDICTED: hypothetical protein [Homo sapiens] 551 e-157
gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo ... 179 2e-45
gi|239753480 PREDICTED: hypothetical protein [Homo sapiens] 160 1e-39
gi|239753760 PREDICTED: hypothetical protein, partial [Homo sapi... 111 8e-25
gi|239742226 PREDICTED: hypothetical protein [Homo sapiens] 102 5e-22
gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens] 77 2e-14
gi|31543535 R3H domain containing 1 [Homo sapiens] 38 0.011
gi|25121980 dispatched B [Homo sapiens] 35 0.069
gi|239756035 PREDICTED: hypothetical protein XP_002344789 [Homo ... 33 0.20
gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo ... 33 0.20
gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo ... 33 0.20
gi|40805858 isthmin 2 homolog isoform 1 [Homo sapiens] 33 0.20
gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens] 33 0.26
gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens] 33 0.26
gi|110347568 centrosomal protein 152kDa [Homo sapiens] 33 0.34
gi|9506545 delta-like 4 protein precursor [Homo sapiens] 32 0.44
gi|114431248 hypothetical protein LOC205717 [Homo sapiens] 31 0.99
gi|239754714 PREDICTED: hypothetical protein [Homo sapiens] 31 0.99
gi|239749263 PREDICTED: hypothetical protein [Homo sapiens] 31 0.99
gi|239743359 PREDICTED: hypothetical protein XP_002342827 [Homo ... 31 0.99
gi|239509052 PREDICTED: hypothetical protein [Homo sapiens] 31 0.99
gi|40805854 isthmin 2 homolog isoform 3 [Homo sapiens] 31 0.99
gi|150378498 fragile site-associated protein [Homo sapiens] 31 1.3
gi|32698714 hypothetical protein LOC284058 [Homo sapiens] 30 1.7
gi|218931217 leucine rich repeat containing 61 [Homo sapiens] 30 2.9
gi|13027616 leucine rich repeat containing 61 [Homo sapiens] 30 2.9
gi|67782311 superkiller viralicidic activity 2-like homolog [Hom... 30 2.9
gi|4501867 aconitase 2, mitochondrial precursor [Homo sapiens] 29 3.8
gi|5902142 DNA polymerase sigma [Homo sapiens] 29 3.8
>gi|239749442 PREDICTED: hypothetical protein XP_002347044 [Homo
sapiens]
Length = 269
Score = 563 bits (1451), Expect = e-161
Identities = 269/269 (100%), Positives = 269/269 (100%)
Query: 1 MAIIFFVSDSIMGICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWACPCGKVRT 60
MAIIFFVSDSIMGICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWACPCGKVRT
Sbjct: 1 MAIIFFVSDSIMGICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWACPCGKVRT 60
Query: 61 VMLTGCPAWSPLKTQSEIRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQ 120
VMLTGCPAWSPLKTQSEIRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQ
Sbjct: 61 VMLTGCPAWSPLKTQSEIRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQ 120
Query: 121 HQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAFEGLQLHDPQ 180
HQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAFEGLQLHDPQ
Sbjct: 121 HQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAFEGLQLHDPQ 180
Query: 181 TRTSAPPCIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPKTP 240
TRTSAPPCIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPKTP
Sbjct: 181 TRTSAPPCIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPKTP 240
Query: 241 VPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
VPPQVFSCKTLKLEKHQLLPGSTAARPSN
Sbjct: 241 VPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
>gi|239754902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 551 bits (1421), Expect = e-157
Identities = 267/274 (97%), Positives = 267/274 (97%), Gaps = 5/274 (1%)
Query: 1 MAIIFFVSDSIMGICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWACPCGKVRT 60
MAIIFFVSDSIMGICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWACPCGKVRT
Sbjct: 1 MAIIFFVSDSIMGICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWACPCGKVRT 60
Query: 61 VMLTGCPAWSPLKTQSEIRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQ 120
VMLTGCPAWSPLKTQSEIRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQ
Sbjct: 61 VMLTGCPAWSPLKTQSEIRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQ 120
Query: 121 HQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPA-----FEGLQ 175
HQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPA GLQ
Sbjct: 121 HQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPANNISSSPGLQ 180
Query: 176 LHDPQTRTSAPPCIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSE 235
LHDPQTRTSAPPCIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSE
Sbjct: 181 LHDPQTRTSAPPCIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSE 240
Query: 236 SPKTPVPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
SPKTPVPPQVFSCKTLKLEKHQLLPGSTAARPSN
Sbjct: 241 SPKTPVPPQVFSCKTLKLEKHQLLPGSTAARPSN 274
>gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo
sapiens]
Length = 389
Score = 179 bits (454), Expect = 2e-45
Identities = 112/213 (52%), Positives = 124/213 (58%), Gaps = 41/213 (19%)
Query: 83 HHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNP 142
H SSGAGPAGTGSFCDTC IT LCE QLPELT+ Q + ++ PGLQLH+P
Sbjct: 32 HPSSGAGPAGTGSFCDTCCITSLCEWIQLPELTDSSPGLQLHDPQSGTSAPPPGLQLHDP 91
Query: 143 QTRTSAPPRVSSCKTLKLEHQLLPGSPAF----------EGLQLHDPQTRTSAPPCIFSS 192
QT TSAPPRVSSC T KLEHQ GSPA GLQLHDPQTRTSAPP + S
Sbjct: 92 QTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTRTSAPPRVSSC 151
Query: 193 TTLNLEHH----------------SSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSES 236
L LEH S GLQL P+T+T +S C LK +HQL
Sbjct: 152 KALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSS-----CKALKRQHQL---- 202
Query: 237 PKTPVPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
PP+V SC TLK E HQL PGS AA PS+
Sbjct: 203 -----PPRVSSCTTLKPE-HQLPPGSPAAWPSS 229
Score = 103 bits (257), Expect = 2e-22
Identities = 87/221 (39%), Positives = 97/221 (43%), Gaps = 73/221 (33%)
Query: 116 EYQYQHQKLTGKMNN--TSSSPGLQLHNPQTRTSA-----------PPRVSSCKTLKLEH 162
E+Q G+ +N SS GLQLH+P+T T + PPRVSSC TLK EH
Sbjct: 157 EHQLPAGSPAGRPSNWIISSPQGLQLHSPKTETVSSCKALKRQHQLPPRVSSCTTLKPEH 216
Query: 163 QLLPGSPAF---------------------------EGLQLHDPQTRTSAPP-------- 187
QL PGSPA +GLQLHDPQT TSAPP
Sbjct: 217 QLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDPQTGTSAPPGSPALLPG 276
Query: 188 --------CIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPKT 239
I S L LEH QL PQT TSA PRV C TLKLEHQL SP
Sbjct: 277 SPASRPSNWIISFPALKLEH------QLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPAA 330
Query: 240 -------PVPPQVFSCKTL----KLEKHQLLPGSTAARPSN 269
P Q+ C L +HQLL G A R S+
Sbjct: 331 RSTTLTEEQPHQLLHCLQLHNLRHQWQHQLLRGRPAQRLSD 371
Score = 28.9 bits (63), Expect = 4.9
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 83 HHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGK--------MNNTSSS 134
H S PA + + +L QL L +Q+QHQ L G+ + S
Sbjct: 321 HQLSPGSPAARSTTLTEEQPHQLLHCLQLHNL-RHQWQHQLLRGRPAQRLSDLKGSIGPS 379
Query: 135 PGLQLHNPQ 143
P LQLH+PQ
Sbjct: 380 PRLQLHHPQ 388
>gi|239753480 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1344
Score = 160 bits (405), Expect = 1e-39
Identities = 125/298 (41%), Positives = 151/298 (50%), Gaps = 61/298 (20%)
Query: 11 IMGICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWACPCGKVRTVMLTGCPAWS 70
I+GICSS P+ FPSSWS PV +S G V + C V+ +WS
Sbjct: 877 IVGICSSQCPVLFPSSWSAPPV-IPFSISHGIVGI---------CSSQGPVLFPS--SWS 924
Query: 71 PLKTQSEIRGCT-----HHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQ--- 122
L TQSEIRG T G GP+ T + C+ +Q ++ Q +
Sbjct: 925 ALPTQSEIRGHTILAVEQDQLGQGPSVTPAASPAYVNGFSCQNSQSISISTETSQEKCSS 984
Query: 123 ---KLTGKMNNTSSSP-GLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAF------- 171
+L + TS+ P GLQLH+PQT TSAPPRVSSC T KLEHQ GSPA
Sbjct: 985 PGLQLHDPQSGTSAPPPGLQLHDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNI 1044
Query: 172 ---EGLQLHDPQTRTSAPPCIFSSTTLNLEHH----------------SSLGLQLQGPQT 212
GLQLHDPQTRTSAPP + S L LEH S GLQL P+T
Sbjct: 1045 SSPPGLQLHDPQTRTSAPPRVSSCKALKLEHQLPAGSPAGRPSNWIISSPQGLQLHSPKT 1104
Query: 213 KTS-ASPRVFRCTTLKLEHQLLSESPKTPVPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
+T+ +S +V C LK +HQL PP+V SC TLK E HQL PGS AA PS+
Sbjct: 1105 ETNISSLQVSSCKALKRQHQL---------PPRVSSCTTLKPE-HQLPPGSPAAWPSS 1152
Score = 56.2 bits (134), Expect = 3e-08
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 138 QLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPA 170
QL +PQT TSA PRVSSC+TLKLEHQL PGSPA
Sbjct: 1231 QLPSPQTGTSALPRVSSCRTLKLEHQLSPGSPA 1263
>gi|239753760 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 267
Score = 111 bits (277), Expect = 8e-25
Identities = 83/196 (42%), Positives = 90/196 (45%), Gaps = 57/196 (29%)
Query: 130 NTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAF----------EGLQLHDP 179
N SS P QLH+PQT SAPPR S C L L+HQL GSPA +GLQLH
Sbjct: 59 NISSPPDRQLHDPQTGISAPPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGS 118
Query: 180 QTRTSAPPCIFSSTTLNLEH-------------------------------HSSLGLQLQ 208
QT TSAP + S T LNL+H S GLQL
Sbjct: 119 QTGTSAPHRVSSCTVLNLQHWLPTRSPDARPSNCNISSPRVSSYTASTWNISSPPGLQLH 178
Query: 209 GPQTKTSASPRVFRCTTLKLEHQLLSESPKTPVPPQ---------------VFSCKTLKL 253
GPQT T A RV RCT LKLEHQL + +P V SC LKL
Sbjct: 179 GPQTATLAPHRVSRCTALKLEHQLPTGYTAAWLPAGSPGARPSNCNISSCWVSSCTALKL 238
Query: 254 EKHQLLPGSTAARPSN 269
E HQL S ARPSN
Sbjct: 239 E-HQLPARSPGARPSN 253
Score = 101 bits (251), Expect = 8e-22
Identities = 86/220 (39%), Positives = 93/220 (42%), Gaps = 74/220 (33%)
Query: 123 KLTGKMNNTSSSP-GLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAF---------- 171
+L G TS+ P LQLH PQT TSAP RVS C KLEH+L GSPA
Sbjct: 4 QLQGPQTGTSAPPPDLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNISSP 63
Query: 172 EGLQLHDPQTRTSAPPCIFSSTTLNLEHH----------------SSLGLQLQGPQTKTS 215
QLHDPQT SAPP T LNL+H S GLQL G QT TS
Sbjct: 64 PDRQLHDPQTGISAPPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGSQTGTS 123
Query: 216 ASPRVFRCTTLKLEHQLLSESP-------------------------------------K 238
A RV CT L L+H L + SP
Sbjct: 124 APHRVSSCTVLNLQHWLPTRSPDARPSNCNISSPRVSSYTASTWNISSPPGLQLHGPQTA 183
Query: 239 TPVPPQVFSCKTLKLEKHQL--------LP-GSTAARPSN 269
T P +V C LKLE HQL LP GS ARPSN
Sbjct: 184 TLAPHRVSRCTALKLE-HQLPTGYTAAWLPAGSPGARPSN 222
Score = 51.2 bits (121), Expect = 9e-07
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 39/105 (37%)
Query: 203 LGLQLQGPQTKTSASP----------------RVFRCTTLKLEHQLLSESPKT------- 239
+GLQLQGPQT TSA P RV RCT KLEH+L + SP
Sbjct: 1 MGLQLQGPQTGTSAPPPDLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNI 60
Query: 240 ---------------PVPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
PP+ C L L+ HQL GS AAR SN
Sbjct: 61 SSPPDRQLHDPQTGISAPPRGSRCTALNLQ-HQLPTGSPAARLSN 104
>gi|239742226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 102 bits (253), Expect = 5e-22
Identities = 82/209 (39%), Positives = 89/209 (42%), Gaps = 65/209 (31%)
Query: 123 KLTGKMNNTSSSP-GLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAF---------- 171
+L G TS+ P LQLH PQT TSAP RVS C KLEH+L GSPA
Sbjct: 4 QLQGPQTGTSAPPPDLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNISSP 63
Query: 172 EGLQLHDPQTRTSAPPCIFSSTTLNLEHH----------------SSLGLQLQGPQTKTS 215
QLHDPQT SAPP T LNL+H S GLQL G QT TS
Sbjct: 64 PDRQLHDPQTGISAPPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGSQTGTS 123
Query: 216 ASPRVFRCTTLKLEHQLLSESP-------------------------------------K 238
A RV CT L L+H L + SP
Sbjct: 124 APHRVSSCTVLNLQHWLPTRSPDARPSNCNISSPRVSSYTASTWNISSPPGLQLHGPQTA 183
Query: 239 TPVPPQVFSCKTLKLEKHQLLPGSTAARP 267
T P +V C LKLE HQL G TAA P
Sbjct: 184 TLAPHRVSRCTALKLE-HQLPTGYTAAWP 211
Score = 101 bits (251), Expect = 8e-22
Identities = 81/200 (40%), Positives = 87/200 (43%), Gaps = 65/200 (32%)
Query: 130 NTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAF----------EGLQLHDP 179
N SS P QLH+PQT SAPPR S C L L+HQL GSPA +GLQLH
Sbjct: 59 NISSPPDRQLHDPQTGISAPPRGSRCTALNLQHQLPTGSPAARLSNRNICSPQGLQLHGS 118
Query: 180 QTRTSAPPCIFSSTTLNLEH-------------------------------HSSLGLQLQ 208
QT TSAP + S T LNL+H S GLQL
Sbjct: 119 QTGTSAPHRVSSCTVLNLQHWLPTRSPDARPSNCNISSPRVSSYTASTWNISSPPGLQLH 178
Query: 209 GPQTKTSASPRVFRCTTLKLEHQL---------LSESPKTPVPPQVFS----------CK 249
GPQT T A RV RCT LKLEHQL S P Q S C
Sbjct: 179 GPQTATLAPHRVSRCTALKLEHQLPTGYTAAWPCSWRPGWEPMFQFGSHAAGGTAGSRCS 238
Query: 250 TLKLEKHQLLPGSTAARPSN 269
+L LPGS ARPSN
Sbjct: 239 SL-----MFLPGSPGARPSN 253
Score = 86.7 bits (213), Expect = 2e-17
Identities = 78/220 (35%), Positives = 87/220 (39%), Gaps = 70/220 (31%)
Query: 115 TEYQYQHQKLTGKM------NNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGS 168
T QHQ TG N S GLQLH QT TSAP RVSSC L L+H L S
Sbjct: 85 TALNLQHQLPTGSPAARLSNRNICSPQGLQLHGSQTGTSAPHRVSSCTVLNLQHWLPTRS 144
Query: 169 PAFE-------------------------GLQLHDPQTRTSAPPCIFSSTTLNLEHHSSL 203
P GLQLH PQT T AP + T L LEH
Sbjct: 145 PDARPSNCNISSPRVSSYTASTWNISSPPGLQLHGPQTATLAPHRVSRCTALKLEHQLPT 204
Query: 204 GLQLQGPQTKTSASPRVF-------------RCTTL---------------------KLE 229
G P + +F RC++L K E
Sbjct: 205 GYTAAWPCSWRPGWEPMFQFGSHAAGGTAGSRCSSLMFLPGSPGARPSNWNISSPALKPE 264
Query: 230 HQLLSESP----KTPVPPQVFSCKTLKLEKHQLLPGSTAA 265
HQL + SP T PP+V SC TLKLE HQLLP S+AA
Sbjct: 265 HQLPAGSPPAQPSTSAPPRVLSCTTLKLE-HQLLPKSSAA 303
Score = 51.2 bits (121), Expect = 9e-07
Identities = 40/105 (38%), Positives = 45/105 (42%), Gaps = 39/105 (37%)
Query: 203 LGLQLQGPQTKTSASP----------------RVFRCTTLKLEHQLLSESPKT------- 239
+GLQLQGPQT TSA P RV RCT KLEH+L + SP
Sbjct: 1 MGLQLQGPQTGTSAPPPDLQLHGPQTGTSAPRRVSRCTACKLEHELPAGSPAAWPSNWNI 60
Query: 240 ---------------PVPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
PP+ C L L+ HQL GS AAR SN
Sbjct: 61 SSPPDRQLHDPQTGISAPPRGSRCTALNLQ-HQLPTGSPAARLSN 104
>gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]
Length = 127
Score = 77.0 bits (188), Expect = 2e-14
Identities = 45/80 (56%), Positives = 51/80 (63%), Gaps = 9/80 (11%)
Query: 78 IRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQYQHQKLTGK--------MN 129
IRG TH S AGP G GSFCDT IT LCE TQLPELT+Y + K GK +
Sbjct: 41 IRGRTHRSREAGPTGRGSFCDTYCITGLCEVTQLPELTQY-HSTPKPHGKNPPRPSDLNS 99
Query: 130 NTSSSPGLQLHNPQTRTSAP 149
+T SSP LQL +PQT T+AP
Sbjct: 100 STGSSPDLQLPDPQTPTAAP 119
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 37.7 bits (86), Expect = 0.011
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 28/127 (22%)
Query: 126 GKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLE-HQLLPGSPAFEG-----LQL--- 176
G+ NN SSS G H + P S C + +L+ HQ G P G +QL
Sbjct: 779 GQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVP 838
Query: 177 HDPQTRTSAPP----------------CIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRV 220
++PQ+ +PP C+ S+ N+ HS QL P + SP
Sbjct: 839 NNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSP---QLSSPIISPAQSPAP 895
Query: 221 FRCTTLK 227
+ +TLK
Sbjct: 896 AQLSTLK 902
>gi|25121980 dispatched B [Homo sapiens]
Length = 1401
Score = 35.0 bits (79), Expect = 0.069
Identities = 37/127 (29%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 142 PQTRTSAPPRVSSCKTLKLEHQLLPGSPAFEGLQLHDPQTRTSAPPCIFSSTTLNLEHHS 201
P R +P +S T KL H+ S E LQLHD + PP S L L+H +
Sbjct: 1167 PLARRRSPSFDTSTATSKLSHR---PSVLSEDLQLHDGPCCSRPPPAPASPRELLLDHQA 1223
Query: 202 SL----GLQLQGPQTKTSASPRV-FRCTTLKLEHQLLSESPKTPV---------PPQVFS 247
LQ P + SP+ R + E + L SP+ P PP F
Sbjct: 1224 VFSQCPALQTSSPYKQAGPSPKTRARQDSQGEEAEPLPASPEAPAHSPKAKAADPPDGFC 1283
Query: 248 CKTLKLE 254
LE
Sbjct: 1284 SSASTLE 1290
>gi|239756035 PREDICTED: hypothetical protein XP_002344789 [Homo
sapiens]
Length = 205
Score = 33.5 bits (75), Expect = 0.20
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 16/103 (15%)
Query: 13 GICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWAC-PCGKVRTVMLTGCPAWSP 71
G +P P+ P SW +P GA L +PWA P +V GC + S
Sbjct: 3 GPLMAPRPVDLPGSWGDVP-------DLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSC 55
Query: 72 LKTQSEIRGCTHHSSGAGPAGTGSFC--DTCRITRLCEQTQLP 112
+ S + +SG A +FC T T C+ LP
Sbjct: 56 CRRASPV------ASGMASANCRTFCRNRTSSSTTPCKVASLP 92
>gi|239750577 PREDICTED: hypothetical protein XP_002347459 [Homo
sapiens]
Length = 205
Score = 33.5 bits (75), Expect = 0.20
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 16/103 (15%)
Query: 13 GICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWAC-PCGKVRTVMLTGCPAWSP 71
G +P P+ P SW +P GA L +PWA P +V GC + S
Sbjct: 3 GPLMAPRPVDLPGSWGDVP-------DLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSC 55
Query: 72 LKTQSEIRGCTHHSSGAGPAGTGSFC--DTCRITRLCEQTQLP 112
+ S + +SG A +FC T T C+ LP
Sbjct: 56 CRRASPV------ASGMASANCRTFCRNRTSSSTTPCKVASLP 92
>gi|239744876 PREDICTED: hypothetical protein XP_002344118 [Homo
sapiens]
Length = 205
Score = 33.5 bits (75), Expect = 0.20
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 16/103 (15%)
Query: 13 GICSSPHPMQFPSSWSGLPVSFRGCLSAGAVLVHRGVPWAC-PCGKVRTVMLTGCPAWSP 71
G +P P+ P SW +P GA L +PWA P +V GC + S
Sbjct: 3 GPLMAPRPVDLPGSWGDVP-------DLGAALTLMLMPWAVRPRRRVSHASSRGCLSRSC 55
Query: 72 LKTQSEIRGCTHHSSGAGPAGTGSFC--DTCRITRLCEQTQLP 112
+ S + +SG A +FC T T C+ LP
Sbjct: 56 CRRASPV------ASGMASANCRTFCRNRTSSSTTPCKVASLP 92
>gi|40805858 isthmin 2 homolog isoform 1 [Homo sapiens]
Length = 571
Score = 33.5 bits (75), Expect = 0.20
Identities = 42/148 (28%), Positives = 57/148 (38%), Gaps = 19/148 (12%)
Query: 112 PELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAF 171
PE+T + + QKL G N T S+P NP T+ SA P + + E +LLP +
Sbjct: 100 PEVTPLRLELQKLPGLANTTLSTP-----NPDTQASASPDPRPLRE-EEEARLLPRTHLQ 153
Query: 172 EGLQLHDPQTRT---------SAPPCIFSSTTLNLEHHSSLGL---QLQGPQTKTSASPR 219
L H T T + PP T L LE L L P + +
Sbjct: 154 AELHQHGCWTVTEPAALTPGNATPPRTQEVTPLLLELQKLPELVHATLSTPNPDNQVTIK 213
Query: 220 VFRCTTLKLEHQLLSESPKTPVPPQVFS 247
V ++ LL+E P P P S
Sbjct: 214 VVEDPQAEVSIDLLAE-PSNPPPQDTLS 240
Score = 31.2 bits (69), Expect = 0.99
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 10/122 (8%)
Query: 147 SAPPRVSSCKTLKLEHQLLPGSPAFEGLQLHDPQTRTSAPPCIFSSTTLNLEHHSSLGLQ 206
+ PPR L+LE Q LPG A L +P T+ SA P L E + L
Sbjct: 94 ATPPRTPEVTPLRLELQKLPGL-ANTTLSTPNPDTQASASP---DPRPLREEEEARL--- 146
Query: 207 LQGPQTKTSASPRVFRCTTLKLEHQLLSESPKTPVPPQVFSCKTLKLEKHQLLPGSTAAR 266
P+T A C T+ E L+ TP Q + L+L+K L +T +
Sbjct: 147 --LPRTHLQAELHQHGCWTV-TEPAALTPGNATPPRTQEVTPLLLELQKLPELVHATLST 203
Query: 267 PS 268
P+
Sbjct: 204 PN 205
>gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens]
Length = 4363
Score = 33.1 bits (74), Expect = 0.26
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 19/209 (9%)
Query: 64 TGCPAWSPLKTQSEIRGCTHHSSGAG--PAGTGSFCDTCRITRLCEQTQLPELTEYQYQH 121
TGC W T + R HS G P G G+F D + E ++++
Sbjct: 2871 TGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTFLDDTHNVSEWREVLTGEEIPFEFEA 2930
Query: 122 QKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSP--AFEGLQLHDP 179
+ GK+ + + L++H Q R + +VS K+ +P + P
Sbjct: 2931 R---GKLRHRHTH-DLRIHQLQVRVNGWEQVSPVSVDKVGTFFRYAAPDKNSSSSTIGSP 2986
Query: 180 QTRTS-APPCIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPK 238
+RT+ P ++ S+ + ++ ++ + T S + R L+ +L +SP
Sbjct: 2987 SSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITVRSALIVR-NRLETPMELRLDSPS 3045
Query: 239 TPVPPQVFSCKTLKLEKHQLLPGSTAARP 267
P P V ++PG + A P
Sbjct: 3046 APDKPVVLPA---------IMPGDSFAVP 3065
>gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens]
Length = 4388
Score = 33.1 bits (74), Expect = 0.26
Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 19/209 (9%)
Query: 64 TGCPAWSPLKTQSEIRGCTHHSSGAG--PAGTGSFCDTCRITRLCEQTQLPELTEYQYQH 121
TGC W T + R HS G P G G+F D + E ++++
Sbjct: 2896 TGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTFLDDTHNVSEWREVLTGEEIPFEFEA 2955
Query: 122 QKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSP--AFEGLQLHDP 179
+ GK+ + + L++H Q R + +VS K+ +P + P
Sbjct: 2956 R---GKLRHRHTH-DLRIHQLQVRVNGWEQVSPVSVDKVGTFFRYAAPDKNSSSSTIGSP 3011
Query: 180 QTRTS-APPCIFSSTTLNLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPK 238
+RT+ P ++ S+ + ++ ++ + T S + R L+ +L +SP
Sbjct: 3012 SSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITVRSALIVR-NRLETPMELRLDSPS 3070
Query: 239 TPVPPQVFSCKTLKLEKHQLLPGSTAARP 267
P P V ++PG + A P
Sbjct: 3071 APDKPVVLPA---------IMPGDSFAVP 3090
>gi|110347568 centrosomal protein 152kDa [Homo sapiens]
Length = 1654
Score = 32.7 bits (73), Expect = 0.34
Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 19/122 (15%)
Query: 69 WSPLKTQSEIRGCTHHSSGAGPAGTGSFCDTCRITRLCEQTQLPELTE----------YQ 118
W ++++E R +H G G + + CEQT L L E +
Sbjct: 105 WEENRSKTEDRHPVYHPEEGGDEGGSGYSPPSK----CEQTDLYHLPENFRPYTNGQKQE 160
Query: 119 YQHQ-----KLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLEHQLLPGSPAFEG 173
+ +Q K + N P Q P + + P SS + Q + GS FEG
Sbjct: 161 FNNQATNVIKFSDPQWNHFQGPSCQGLEPYNKVTYKPYQSSAQNNGSPAQEITGSDTFEG 220
Query: 174 LQ 175
LQ
Sbjct: 221 LQ 222
>gi|9506545 delta-like 4 protein precursor [Homo sapiens]
Length = 685
Score = 32.3 bits (72), Expect = 0.44
Identities = 26/98 (26%), Positives = 34/98 (34%), Gaps = 24/98 (24%)
Query: 13 GICSSPHPMQFPSSWSGLP----VSFRGCLSAGAVLVHRGVPWACPCGKVRTVMLTGCPA 68
G CS P W G + GC PW C C +
Sbjct: 231 GYCSKPAECLCRPGWQGRLCNECIPHNGCRHGTC-----STPWQCTCDE----------G 275
Query: 69 WSPLKTQSEIRGCTHHS---SGAGPAGTG--SFCDTCR 101
W L ++ CTHHS +GA + +G S+ TCR
Sbjct: 276 WGGLFCDQDLNYCTHHSPCKNGATCSNSGQRSYTCTCR 313
>gi|114431248 hypothetical protein LOC205717 [Homo sapiens]
Length = 2245
Score = 31.2 bits (69), Expect = 0.99
Identities = 38/144 (26%), Positives = 51/144 (35%), Gaps = 22/144 (15%)
Query: 128 MNNTSSSPGLQLHNP--QTRTSAPPRVSSCKTLKLEHQLLPGSPAFEGLQLHDPQTRTSA 185
+ S S G++ N Q TS PP ++S L HQ P L +T+
Sbjct: 1210 LEKPSCSLGIKTSNASLQDSTSQPPSITSLSVNNLIHQSSISHPLASCAGLSPTSEQTTV 1269
Query: 186 PPCIFSSTTLNLE-HHSSLGLQLQGPQTKTSASPRVFRCTT------------LKLEHQL 232
P T+NL SS G Q GP T S T LK H+
Sbjct: 1270 P------ATVNLTVSSSSYGSQPPGPSLMTEYSQEQLNTMTSTIPNSQIQEPLLKPSHES 1323
Query: 233 LSESPKTPVPPQVFSCKTLKLEKH 256
+S K V + + K +KH
Sbjct: 1324 RKDSAKRAVQDDLL-LSSAKRQKH 1346
>gi|239754714 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 31.2 bits (69), Expect = 0.99
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 98 DTCRITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKT 157
+T R T + + Q + T Y +H ++ + SSP NP SA SS +
Sbjct: 5 ETARSTAMNARAQYRDFT-YMGEHSPVSVTARGSFSSPS----NPARGNSAASSFSSPSS 59
Query: 158 LKLEHQLLPGSPAFEGLQLHDP 179
L+ +H PG PA L P
Sbjct: 60 LQRQHVGEPGEPALPSAGLARP 81
>gi|239749263 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 31.2 bits (69), Expect = 0.99
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 98 DTCRITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKT 157
+T R T + + Q + T Y +H ++ + SSP NP SA SS +
Sbjct: 5 ETARSTAMNARAQYRDFT-YMGEHSPVSVTARGSFSSPS----NPARGNSAASSFSSPSS 59
Query: 158 LKLEHQLLPGSPAFEGLQLHDP 179
L+ +H PG PA L P
Sbjct: 60 LQRQHVGEPGEPALPSAGLARP 81
>gi|239743359 PREDICTED: hypothetical protein XP_002342827 [Homo
sapiens]
Length = 194
Score = 31.2 bits (69), Expect = 0.99
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 98 DTCRITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKT 157
+T R T + + Q + T Y +H ++ + SSP NP SA SS +
Sbjct: 5 ETARSTAMNARAQYRDFT-YMGEHSPVSVTARGSFSSPS----NPARGNSAASSFSSPSS 59
Query: 158 LKLEHQLLPGSPAFEGLQLHDP 179
L+ +H PG PA L P
Sbjct: 60 LQRQHVGEPGEPALPSAGLARP 81
>gi|239509052 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 31.2 bits (69), Expect = 0.99
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 98 DTCRITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKT 157
+T R T + + Q + T Y +H ++ + SSP NP SA SS +
Sbjct: 5 ETARSTAMNARAQYRDFT-YMGEHSPVSVTARGSFSSPS----NPARGNSAASSFSSPSS 59
Query: 158 LKLEHQLLPGSPAFEGLQLHDP 179
L+ +H PG PA L P
Sbjct: 60 LQRQHVGEPGEPALPSAGLARP 81
>gi|40805854 isthmin 2 homolog isoform 3 [Homo sapiens]
Length = 292
Score = 31.2 bits (69), Expect = 0.99
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 10/122 (8%)
Query: 147 SAPPRVSSCKTLKLEHQLLPGSPAFEGLQLHDPQTRTSAPPCIFSSTTLNLEHHSSLGLQ 206
+ PPR L+LE Q LPG A L +P T+ SA P L E + L
Sbjct: 94 ATPPRTPEVTPLRLELQKLPGL-ANTTLSTPNPDTQASASP---DPRPLREEEEARL--- 146
Query: 207 LQGPQTKTSASPRVFRCTTLKLEHQLLSESPKTPVPPQVFSCKTLKLEKHQLLPGSTAAR 266
P+T A C T+ E L+ TP Q + L+L+K L +T +
Sbjct: 147 --LPRTHLQAELHQHGCWTV-TEPAALTPGNATPPRTQEVTPLLLELQKLPELVHATLST 203
Query: 267 PS 268
P+
Sbjct: 204 PN 205
Score = 31.2 bits (69), Expect = 0.99
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 112 PELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPP 150
PE+T + + QKL G N T S+P NP T+ SA P
Sbjct: 100 PEVTPLRLELQKLPGLANTTLSTP-----NPDTQASASP 133
>gi|150378498 fragile site-associated protein [Homo sapiens]
Length = 5005
Score = 30.8 bits (68), Expect = 1.3
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 168 SPAFEGLQLHDPQTRTSAPPCIFSSTTLNLEHHSSLGLQLQGP-QTKTSASPRVFRCTTL 226
+PAF+G+ LH P A P + ++ EH LGL G Q+ TSA F
Sbjct: 2154 TPAFKGVSLHRP-----AQP-LKPQIAMDHEHEDGLGLDNGGGLQSDTSADGAEFEFDAA 2207
Query: 227 KL-EHQLLSESPKTPVPP 243
+ EH +L E PP
Sbjct: 2208 TVSEHTMLLEGTANRPPP 2225
>gi|32698714 hypothetical protein LOC284058 [Homo sapiens]
Length = 1105
Score = 30.4 bits (67), Expect = 1.7
Identities = 51/229 (22%), Positives = 78/229 (34%), Gaps = 38/229 (16%)
Query: 67 PAWSPLKTQSEIRGCTHHS-------SGAGPAGTGSFCDTCRITRLCEQTQLPELTEYQY 119
P+W + QS ++G S A A + C+ R T +P
Sbjct: 888 PSWREVDLQS-LKGSPDEENEEIEDLSDAAFAALHAKCEEMERARWLWTTSVPPQRRGSR 946
Query: 120 QHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTL-KLEHQLLPGSPAFEGL---- 174
++ G+ ++P L NP T A P VSS +L + H P SP L
Sbjct: 947 SYRSSDGR-----TTPQLGSANPSTPQPASPDVSSSHSLSEYSHGQSPRSPISPELHSAP 1001
Query: 175 ----------QLHDPQTRTSAPPCIFSSTTLNLEHHSSLGLQLQGPQT----KTSASPRV 220
L TR S P ++ + L PQ + A R
Sbjct: 1002 LTPVARDTPRHLASEDTRCSTPELGLDEQSVQPWERRTFPL-AHSPQAECEDQLDAQERA 1060
Query: 221 FRCTTLKLEHQLLSESPKTPVPPQVFSCKTLKLEKHQLLPGSTAARPSN 269
RCT + E+ P P + + L+ L+ +TA RP++
Sbjct: 1061 ARCTRRTSGSKTGRETEAAPTSPPI-----VPLKSRHLVAAATAQRPTH 1104
>gi|218931217 leucine rich repeat containing 61 [Homo sapiens]
Length = 259
Score = 29.6 bits (65), Expect = 2.9
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 102 ITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLE 161
+T L L +L + +LTG + ++ LQ N A P C
Sbjct: 65 LTHLGPLASLRQLAVLNVSNNRLTG-LEPLATCENLQSLNAAGNLLATPGQLQC------ 117
Query: 162 HQLLPGSPAFEGLQLHDPQTRTSAPPC 188
L G P E L+L DP R S P C
Sbjct: 118 ---LAGLPCLEYLRLRDPLARLSNPLC 141
>gi|13027616 leucine rich repeat containing 61 [Homo sapiens]
Length = 259
Score = 29.6 bits (65), Expect = 2.9
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 102 ITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCKTLKLE 161
+T L L +L + +LTG + ++ LQ N A P C
Sbjct: 65 LTHLGPLASLRQLAVLNVSNNRLTG-LEPLATCENLQSLNAAGNLLATPGQLQC------ 117
Query: 162 HQLLPGSPAFEGLQLHDPQTRTSAPPC 188
L G P E L+L DP R S P C
Sbjct: 118 ---LAGLPCLEYLRLRDPLARLSNPLC 141
>gi|67782311 superkiller viralicidic activity 2-like homolog [Homo
sapiens]
Length = 1246
Score = 29.6 bits (65), Expect = 2.9
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 196 NLEHHSSLGLQLQGPQTKTSASPRVFRCTTLKLEHQLLSESPKTPVP 242
N EHH++LG+ LQ TS RVF TTL L + LS+ P+ P
Sbjct: 849 NQEHHNALGVILQVSSNSTS---RVF--TTLVLCDKPLSQDPQDRGP 890
>gi|4501867 aconitase 2, mitochondrial precursor [Homo sapiens]
Length = 780
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 36 GCLSAGAVLVHRGVPWACPCGKVRTVMLTG-CPAWSPLK 73
G A AV V G+PW C KV V LTG WS K
Sbjct: 207 GVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWSSPK 245
>gi|5902142 DNA polymerase sigma [Homo sapiens]
Length = 542
Score = 29.3 bits (64), Expect = 3.8
Identities = 25/118 (21%), Positives = 43/118 (36%)
Query: 97 CDTCRITRLCEQTQLPELTEYQYQHQKLTGKMNNTSSSPGLQLHNPQTRTSAPPRVSSCK 156
C T + + Q P + +GK T+S + N QTR + PP
Sbjct: 377 CTTPSVYQFSLQAPAPLMAGLPTALPMPSGKPQPTTSRTLIMTTNNQTRFTIPPPTLGVA 436
Query: 157 TLKLEHQLLPGSPAFEGLQLHDPQTRTSAPPCIFSSTTLNLEHHSSLGLQLQGPQTKT 214
+ + G+ + + + SA P SS L + H+ + L ++G T
Sbjct: 437 PVPCRQAGVEGTASLKAVHHMSSPAIPSASPNPLSSPHLYHKQHNGMKLSMKGSHGHT 494
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,916,215
Number of Sequences: 37866
Number of extensions: 643495
Number of successful extensions: 1880
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1717
Number of HSP's gapped (non-prelim): 89
length of query: 269
length of database: 18,247,518
effective HSP length: 101
effective length of query: 168
effective length of database: 14,423,052
effective search space: 2423072736
effective search space used: 2423072736
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.