Guide to the Human Genome
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Search of human proteins with 239749109

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo
sapiens]
         (201 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754544 PREDICTED: hypothetical protein [Homo sapiens]           423   e-119
gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo ...   423   e-119
gi|239743138 PREDICTED: hypothetical protein XP_002342745 [Homo ...   423   e-119
gi|239508796 PREDICTED: hypothetical protein [Homo sapiens]           423   e-119
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]            39   0.003
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    37   0.009
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    37   0.009
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    37   0.009
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            34   0.073
gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo ...    34   0.073
gi|239754220 PREDICTED: hypothetical protein XP_002345913 [Homo ...    33   0.16 
gi|239748730 PREDICTED: hypothetical protein XP_002346792 [Homo ...    33   0.16 
gi|239756839 PREDICTED: hypothetical protein [Homo sapiens]            33   0.21 
gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo ...    33   0.21 
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]       32   0.28 
gi|40805852 thrombospondin type I domain-containing 1 isoform 2 ...    32   0.28 
gi|8923894 thrombospondin type I domain-containing 1 isoform 1 [...    32   0.28 
gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo sa...    32   0.36 
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     32   0.47 
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     32   0.47 
gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ...    32   0.47 
gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ...    32   0.47 
gi|239049540 FCH domain only 1 isoform c [Homo sapiens]                31   0.62 
gi|239049457 FCH domain only 1 isoform b [Homo sapiens]                31   0.62 
gi|29789054 FCH domain only 1 isoform b [Homo sapiens]                 31   0.62 
gi|239049440 FCH domain only 1 isoform a [Homo sapiens]                31   0.62 
gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo ...    31   0.81 
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       31   0.81 
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       31   0.81 
gi|239755027 PREDICTED: hypothetical protein [Homo sapiens]            30   1.1  

>gi|239754544 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 201

 Score =  423 bits (1088), Expect = e-119
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
           MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN
Sbjct: 1   MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60

Query: 61  MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
           MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ
Sbjct: 61  MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120

Query: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
           MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL
Sbjct: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180

Query: 181 PHRGRGARARPPEAFGLAWEP 201
           PHRGRGARARPPEAFGLAWEP
Sbjct: 181 PHRGRGARARPPEAFGLAWEP 201


>gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo
           sapiens]
          Length = 201

 Score =  423 bits (1088), Expect = e-119
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
           MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN
Sbjct: 1   MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60

Query: 61  MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
           MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ
Sbjct: 61  MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120

Query: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
           MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL
Sbjct: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180

Query: 181 PHRGRGARARPPEAFGLAWEP 201
           PHRGRGARARPPEAFGLAWEP
Sbjct: 181 PHRGRGARARPPEAFGLAWEP 201


>gi|239743138 PREDICTED: hypothetical protein XP_002342745 [Homo
           sapiens]
          Length = 201

 Score =  423 bits (1088), Expect = e-119
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
           MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN
Sbjct: 1   MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60

Query: 61  MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
           MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ
Sbjct: 61  MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120

Query: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
           MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL
Sbjct: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180

Query: 181 PHRGRGARARPPEAFGLAWEP 201
           PHRGRGARARPPEAFGLAWEP
Sbjct: 181 PHRGRGARARPPEAFGLAWEP 201


>gi|239508796 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 201

 Score =  423 bits (1088), Expect = e-119
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
           MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN
Sbjct: 1   MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60

Query: 61  MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
           MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ
Sbjct: 61  MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120

Query: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
           MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL
Sbjct: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180

Query: 181 PHRGRGARARPPEAFGLAWEP 201
           PHRGRGARARPPEAFGLAWEP
Sbjct: 181 PHRGRGARARPPEAFGLAWEP 201


>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 113

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 27/60 (45%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 102 SWVPMPGGPQLSP-GGGVGQ--MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCR 158
           SW    G    +P GGG GQ   P P R  +  PP RQ   R GPA P    R AAAW R
Sbjct: 7   SWGDQAGERARAPSGGGSGQAQRPGPGRGSWRRPPRRQ---RPGPAAPSPPARGAAAWGR 63



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 102 SWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRG 159
           +W    GGP    GG  G +P   RR   EP GR     +G  +P G  RRAAAW  G
Sbjct: 60  AWGRSGGGPAAQSGGDGGGLP---RRAGAEPGGRGG--GSGGTMPGG--RRAAAWLTG 110


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 20/130 (15%)

Query: 78  TVSYFSQESGSTSADYTKTNNTEGSWVP--------MPGGPQLSP-GGGVGQMPS----- 123
           T+S     SGSTS+   ++N  +  + P        +PGGP  SP G  VG   S     
Sbjct: 637 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPI 696

Query: 124 -----PLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKL 178
                P  +  P+PPG Q    + PA+ +  M +   +  G +    + Q     T P +
Sbjct: 697 SPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSM 756

Query: 179 GLPHRGRGAR 188
             PH   G +
Sbjct: 757 S-PHPSPGGQ 765


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 20/130 (15%)

Query: 78  TVSYFSQESGSTSADYTKTNNTEGSWVP--------MPGGPQLSP-GGGVGQMPS----- 123
           T+S     SGSTS+   ++N  +  + P        +PGGP  SP G  VG   S     
Sbjct: 624 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPI 683

Query: 124 -----PLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKL 178
                P  +  P+PPG Q    + PA+ +  M +   +  G +    + Q     T P +
Sbjct: 684 SPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSM 743

Query: 179 GLPHRGRGAR 188
             PH   G +
Sbjct: 744 S-PHPSPGGQ 752


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
           [Homo sapiens]
          Length = 2178

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 20/130 (15%)

Query: 78  TVSYFSQESGSTSADYTKTNNTEGSWVP--------MPGGPQLSP-GGGVGQMPS----- 123
           T+S     SGSTS+   ++N  +  + P        +PGGP  SP G  VG   S     
Sbjct: 624 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPI 683

Query: 124 -----PLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKL 178
                P  +  P+PPG Q    + PA+ +  M +   +  G +    + Q     T P +
Sbjct: 684 SPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSM 743

Query: 179 GLPHRGRGAR 188
             PH   G +
Sbjct: 744 S-PHPSPGGQ 752


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 15/86 (17%)

Query: 100 EGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRG 159
           E S  P PG P+    G  G+ P P RR+ P   G++    A  A PR   +R+ A C  
Sbjct: 94  EASPGPAPGAPRAR--GSCGREPGPRRRRAPSSAGKRPAAAARAAPPR---QRSLARCLP 148

Query: 160 ARLGVLVGQLRRWFTRPKLG--LPHR 183
             +G  V        RP +G  LP R
Sbjct: 149 RSVGSCV--------RPSVGPSLPRR 166


>gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo
           sapiens]
          Length = 230

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 32/92 (34%), Positives = 38/92 (41%), Gaps = 13/92 (14%)

Query: 107 PGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVV------LRAGPAVPRGSMRRAAAW---C 157
           PG P L P  G    P  LR  +    G +V       L  GP  P G  R A  W    
Sbjct: 67  PGSPPLPPSAGPAPPPG-LREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPRWEPAA 125

Query: 158 RGARLGVLVGQLRRWFTRPKLGLPHRGRGARA 189
            GA LG +V   +R  +R + G    GRGA A
Sbjct: 126 AGALLGPMVALSQRDCSRDRDG---AGRGAPA 154


>gi|239754220 PREDICTED: hypothetical protein XP_002345913 [Homo
           sapiens]
          Length = 117

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/63 (42%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 100 EGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRG 159
           EG+     GGP  SPG        P  R    P G QV L  G AVP     R AAWCR 
Sbjct: 26  EGTQAQGEGGP--SPGRTARSQAGPASRI--SPAGLQV-LSEGAAVPHSG--RDAAWCRD 78

Query: 160 ARL 162
           A L
Sbjct: 79  AHL 81


>gi|239748730 PREDICTED: hypothetical protein XP_002346792 [Homo
           sapiens]
          Length = 117

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/63 (42%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 100 EGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRG 159
           EG+     GGP  SPG        P  R    P G QV L  G AVP     R AAWCR 
Sbjct: 26  EGTQAQGEGGP--SPGRTARSQAGPASRI--SPAGLQV-LSEGAAVPHSG--RDAAWCRD 78

Query: 160 ARL 162
           A L
Sbjct: 79  AHL 81


>gi|239756839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 743

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 12/101 (11%)

Query: 99  TEGSWVPMPGGPQLSPGGGVGQMPSPLR----RQFPEPPGRQVVLRAGPAVPRGSMRRAA 154
           T   W    GG +    GG GQ+   LR    R+ P+        R   A+ RG+  R A
Sbjct: 534 THPGWHSEAGGRR---DGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRA 590

Query: 155 AWCRGARLGVLVGQL-----RRWFTRPKLGLPHRGRGARAR 190
           A   G+  G+L G +     RR      +G   RGRGAR R
Sbjct: 591 AQGAGSASGLLGGAVGARGRRRAHKPVVVGERLRGRGARVR 631


>gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo
           sapiens]
          Length = 697

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 12/101 (11%)

Query: 99  TEGSWVPMPGGPQLSPGGGVGQMPSPLR----RQFPEPPGRQVVLRAGPAVPRGSMRRAA 154
           T   W    GG +    GG GQ+   LR    R+ P+        R   A+ RG+  R A
Sbjct: 488 THPGWHSEAGGRR---DGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRA 544

Query: 155 AWCRGARLGVLVGQL-----RRWFTRPKLGLPHRGRGARAR 190
           A   G+  G+L G +     RR      +G   RGRGAR R
Sbjct: 545 AQGAGSASGLLGGAVGARGRRRAHKPVVVGERLRGRGARVR 585


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 26/95 (27%), Positives = 34/95 (35%), Gaps = 8/95 (8%)

Query: 57   PSPNMSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSW-VPMPGG------ 109
            P   + P F LQ D  +  F    + SQ+    SA Y    N   +     P G      
Sbjct: 1664 PCGALQPGFPLQHDGERDPFTCPGFASQDKALGSAQYEDPRNLHSAGRSSSPAGETEGDR 1723

Query: 110  -PQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGP 143
             PQ  PG G   +P P ++     P  Q     GP
Sbjct: 1724 EPQARPGEGTAPLPPPGQKVGGSQPPFQGQREPGP 1758


>gi|40805852 thrombospondin type I domain-containing 1 isoform 2
           [Homo sapiens]
          Length = 799

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 19/125 (15%)

Query: 16  AFIPVNPKP-------SSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPNMSPFFDLQ 68
           AF P +P P        S  ++ +  +S C    +A+ + +LW  FG P+   +P     
Sbjct: 341 AFQPSSPSPLQPQGPVKSNNIVTVTGISLCLFIIIATVLITLWRRFGRPAKCSTPARHNS 400

Query: 69  IDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQ 128
           I             S    S   +  + +   GS+     GP  SPG     +P   RR 
Sbjct: 401 IHSP----------SFRKNSDEENICELSEQRGSFSDGGDGPTGSPGD--TGIPLTYRRS 448

Query: 129 FPEPP 133
            P PP
Sbjct: 449 GPVPP 453


>gi|8923894 thrombospondin type I domain-containing 1 isoform 1
           [Homo sapiens]
          Length = 852

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 19/125 (15%)

Query: 16  AFIPVNPKP-------SSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPNMSPFFDLQ 68
           AF P +P P        S  ++ +  +S C    +A+ + +LW  FG P+   +P     
Sbjct: 394 AFQPSSPSPLQPQGPVKSNNIVTVTGISLCLFIIIATVLITLWRRFGRPAKCSTPARHNS 453

Query: 69  IDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQ 128
           I             S    S   +  + +   GS+     GP  SPG     +P   RR 
Sbjct: 454 IHSP----------SFRKNSDEENICELSEQRGSFSDGGDGPTGSPGD--TGIPLTYRRS 501

Query: 129 FPEPP 133
            P PP
Sbjct: 502 GPVPP 506


>gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo
           sapiens]
          Length = 669

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 41/142 (28%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 16  AFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGP-----SPNMSPFFDLQID 70
           AF PV PKP   G  ++ S        ++    SL   FGGP     S + S   D  + 
Sbjct: 147 AFKPVLPKPR--GAPSLPSFMGPRATGLSGSQGSLTQLFGGPASSSSSSSSSSAADKPLA 204

Query: 71  KSKRSFVTVSYFSQESGSTSADYTKTNNTEGS--WVPMPGGPQLSPGGGVGQMPSPLRRQ 128
            S  +    S    +SG  S     T +T G+      PGG   S G G G +P P  R 
Sbjct: 205 FSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTTSSPGGHLPSHGSGRGALPGP-ARG 263

Query: 129 FPEPPGRQVVLRAGPAVPRGSM 150
            P  P      R+  +   GS+
Sbjct: 264 VPTGPSHSDSGRSSSSKSTGSL 285


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 105 PMPGGPQLSPG----GGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRG 148
           P+PGGP + P     GG G  P P     P PP     + A P +P G
Sbjct: 710 PLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFG 757


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)

Query: 105 PMPGGPQLSPG----GGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRG 148
           P+PGGP + P     GG G  P P     P PP     + A P +P G
Sbjct: 719 PLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFG 766


>gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo
           sapiens]
          Length = 321

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 112 LSPGGGVGQMPSPLRRQF-PEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLR 170
           LS G   G+   P  R+  P+P  R+      P  P GS R+A    R AR   L G  R
Sbjct: 249 LSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARGAALGGAFR 308


>gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo
           sapiens]
          Length = 321

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 112 LSPGGGVGQMPSPLRRQF-PEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLR 170
           LS G   G+   P  R+  P+P  R+      P  P GS R+A    R AR   L G  R
Sbjct: 249 LSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARGAALGGAFR 308


>gi|239049540 FCH domain only 1 isoform c [Homo sapiens]
          Length = 839

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 84  QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPP 133
           ++SG  S  +     +  SWVP PG PQ  P     + P P  R    PP
Sbjct: 423 EDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPS---CRAPPPEARGIRAPP 469


>gi|239049457 FCH domain only 1 isoform b [Homo sapiens]
          Length = 889

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 84  QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPP 133
           ++SG  S  +     +  SWVP PG PQ  P     + P P  R    PP
Sbjct: 473 EDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPS---CRAPPPEARGIRAPP 519


>gi|29789054 FCH domain only 1 isoform b [Homo sapiens]
          Length = 889

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 84  QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPP 133
           ++SG  S  +     +  SWVP PG PQ  P     + P P  R    PP
Sbjct: 473 EDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPS---CRAPPPEARGIRAPP 519


>gi|239049440 FCH domain only 1 isoform a [Homo sapiens]
          Length = 891

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 84  QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPP 133
           ++SG  S  +     +  SWVP PG PQ  P     + P P  R    PP
Sbjct: 473 EDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPS---CRAPPPEARGIRAPP 519


>gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo
           sapiens]
          Length = 697

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 12/99 (12%)

Query: 99  TEGSWVPMPGGPQLSPGGGVGQMPSPLR----RQFPEPPGRQVVLRAGPAVPRGSMRRAA 154
           T   W    GG +    GG GQ+   LR    R+ P+        R   A+ RG+  R A
Sbjct: 488 THPGWHSEAGGRR---DGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRA 544

Query: 155 AWCRGARLGVLVGQL-----RRWFTRPKLGLPHRGRGAR 188
           A   G+  G+L G +     RR      +G   RGRGAR
Sbjct: 545 AQGAGSASGLLGGAVGARGRRRAHKPVVVGERLRGRGAR 583


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 84  QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGP 143
           Q+  S +A  T+    +    P+ GGP   P       PSP R+  P    RQ  + +GP
Sbjct: 516 QQPASQAAPPTQGQGRQSR--PVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV-SGP 572

Query: 144 AVPRGS 149
           A P+ S
Sbjct: 573 APPKAS 578


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 84  QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGP 143
           Q+  S +A  T+    +    P+ GGP   P       PSP R+  P    RQ  + +GP
Sbjct: 516 QQPASQAAPPTQGQGRQSR--PVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV-SGP 572

Query: 144 AVPRGS 149
           A P+ S
Sbjct: 573 APPKAS 578


>gi|239755027 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 239

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 8/43 (18%)

Query: 157 CRGARLGVLVGQLRRW--------FTRPKLGLPHRGRGARARP 191
           C GA+ G ++G+  RW        + RP LG P  G GA  RP
Sbjct: 85  CVGAQGGDVLGKGTRWTLGRADGSWERPGLGTPRTGPGAERRP 127


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,034,880
Number of Sequences: 37866
Number of extensions: 568173
Number of successful extensions: 2296
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 2235
Number of HSP's gapped (non-prelim): 138
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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