Guide to the Human Genome
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Search of human proteins with 239749048

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo
sapiens]
         (401 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo ...   804   0.0  
gi|239743075 PREDICTED: hypothetical protein XP_002342752 [Homo ...   804   0.0  
gi|239508721 PREDICTED: hypothetical protein [Homo sapiens]           804   0.0  
gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]            40   0.003
gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]            40   0.005
gi|150170670 piccolo isoform 2 [Homo sapiens]                          40   0.005
gi|150378539 piccolo isoform 1 [Homo sapiens]                          40   0.005
gi|237757326 synaptojanin 1 isoform d [Homo sapiens]                   39   0.006
gi|154146231 DMRT-like family A2 [Homo sapiens]                        39   0.006
gi|148613882 homeobox A4 [Homo sapiens]                                39   0.008
gi|223633935 hypothetical protein LOC254427 [Homo sapiens]             37   0.032
gi|239754209 PREDICTED: hypothetical protein [Homo sapiens]            37   0.032
gi|239748740 PREDICTED: hypothetical protein [Homo sapiens]            37   0.032
gi|33286436 gametogenetin [Homo sapiens]                               37   0.032
gi|154689780 son of sevenless homolog 2 [Homo sapiens]                 37   0.041
gi|122937321 UNC homeobox [Homo sapiens]                               37   0.041
gi|148727370 immediate early response 5-like [Homo sapiens]            37   0.041
gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]            36   0.054
gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]            36   0.054
gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]            36   0.054
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             36   0.071
gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ...    36   0.071
gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ...    36   0.071
gi|48375167 microtubule-associated protein 6 isoform 2 [Homo sap...    36   0.071
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap...    36   0.071
gi|62945417 dystrophia myotonica-containing WD repeat motif prot...    36   0.071
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            35   0.092
gi|154146199 sal-like 3 [Homo sapiens]                                 35   0.12 
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]            35   0.16 
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]            35   0.16 

>gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo
           sapiens]
          Length = 401

 Score =  804 bits (2077), Expect = 0.0
 Identities = 401/401 (100%), Positives = 401/401 (100%)

Query: 1   MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
           MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ
Sbjct: 1   MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60

Query: 61  SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
           SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ
Sbjct: 61  SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120

Query: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
           EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD
Sbjct: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180

Query: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
           VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA
Sbjct: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240

Query: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
           VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE
Sbjct: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300

Query: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
           RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV
Sbjct: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360

Query: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
           PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA
Sbjct: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401


>gi|239743075 PREDICTED: hypothetical protein XP_002342752 [Homo
           sapiens]
          Length = 401

 Score =  804 bits (2077), Expect = 0.0
 Identities = 401/401 (100%), Positives = 401/401 (100%)

Query: 1   MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
           MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ
Sbjct: 1   MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60

Query: 61  SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
           SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ
Sbjct: 61  SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120

Query: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
           EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD
Sbjct: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180

Query: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
           VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA
Sbjct: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240

Query: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
           VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE
Sbjct: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300

Query: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
           RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV
Sbjct: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360

Query: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
           PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA
Sbjct: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401


>gi|239508721 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 401

 Score =  804 bits (2077), Expect = 0.0
 Identities = 401/401 (100%), Positives = 401/401 (100%)

Query: 1   MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
           MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ
Sbjct: 1   MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60

Query: 61  SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
           SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ
Sbjct: 61  SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120

Query: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
           EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD
Sbjct: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180

Query: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
           VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA
Sbjct: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240

Query: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
           VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE
Sbjct: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300

Query: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
           RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV
Sbjct: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360

Query: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
           PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA
Sbjct: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401


>gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]
          Length = 478

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 33/96 (34%), Positives = 38/96 (39%), Gaps = 15/96 (15%)

Query: 311 AGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRP------------RP 358
           A   GGAP P  G  GP  P+A    A+ A P+   RRGD    +             RP
Sbjct: 3   AAAAGGAPGPAPGPAGPPPPAAPTSAAR-APPQALRRRGDSRRRQAALFFLNNISLDGRP 61

Query: 359 PVPPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLA 394
             P L P G  P P     R P  P     PTG+ A
Sbjct: 62  --PSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPA 95


>gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 645

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 36/98 (36%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 304 RGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFY--RRGDVSATRPRPPVP 361
           RG   W A     A A L G      PSA        APR      RG  SA    PP P
Sbjct: 533 RGHSPWAALTDSAAGAELPGL----VPSAPRRPGSATAPRPLRVPGRGAQSAEPGTPPSP 588

Query: 362 PLAPRGRGPG---PRDPALRPPLLPRRCSHPTGVLAAP 396
           P A  G GPG    R PA  PP L  R + P      P
Sbjct: 589 PGAEHGGGPGLILLRFPAAPPPRLQARPAAPQTCAGCP 626


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 340  AAPRTFYRRG--DVSATRPRPPVPPLAPRGRGPGPRDPALRPPLLPR 384
            A PR F+R    D+SA  P PP PP  P    P P  P L PP  P+
Sbjct: 2388 AKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPK 2434


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 340  AAPRTFYRRG--DVSATRPRPPVPPLAPRGRGPGPRDPALRPPLLPR 384
            A PR F+R    D+SA  P PP PP  P    P P  P L PP  P+
Sbjct: 2388 AKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPK 2434


>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
          Length = 1526

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 42/148 (28%), Positives = 57/148 (38%), Gaps = 18/148 (12%)

Query: 264  LNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDERPLRGPGRWVAGPCGGAPAPLFG 323
            L P++S+     P        C +  +    + ++  RP R P R   GP     +P+  
Sbjct: 1025 LQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSR-TPGPPSAQSSPIDA 1083

Query: 324  CRGPHAPSAALHKAQLAAP-RTFYRRGDVSATRPRPPVPPLAPRGR----------GPGP 372
               P  P      AQ   P R    R     TRP PP  P  P GR          GPGP
Sbjct: 1084 --QPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGRSQPSPQAGLAGPGP 1141

Query: 373  RDPALRPPLLPRRCSHPTGVLAAPRSAA 400
               +   P +P R     GV++AP+S A
Sbjct: 1142 AGYSTARPTIPPR----AGVISAPQSHA 1165


>gi|154146231 DMRT-like family A2 [Homo sapiens]
          Length = 542

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 29/71 (40%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 312 GPCGGAPAPLFG-CRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPVPPLAPRG--R 368
           GP  GAPA   G   G     A L K  L  P+T  + G   +  P PPV PL+P G   
Sbjct: 167 GPGAGAPAGTGGGAAGAGGSEAKLQKFDLF-PKTLLQAGRPGSPLP-PPVKPLSPDGADS 224

Query: 369 GPGPRDPALRP 379
           GPG   P +RP
Sbjct: 225 GPGTSSPEVRP 235


>gi|148613882 homeobox A4 [Homo sapiens]
          Length = 320

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 16/93 (17%)

Query: 325 RGPHAPSAALHKAQLAAPRTF---YRRGDVSATRPRPPVPPLAPRGRG------------ 369
           R P  P+AAL+ A  AA   +   YR G      P+P  PP   +G              
Sbjct: 80  REPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQAKGPAHGLHASHVLQPQ 139

Query: 370 -PGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
            P P  P   PP  PRRC         P   +A
Sbjct: 140 LPPPLQPRAVPPAAPRRCEAAPATPGVPAGGSA 172


>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
          Length = 435

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 307 GRWVAGPCGGAPAPLFGCRGPHAPSAA-----LHKAQLAAPRTFYRRGDVSATRPRPPVP 361
           GR + GP     A   G + P  P+ A      H+A  +AP +F   G     RP P +P
Sbjct: 319 GRGLPGPAESLRA---GGQAPRGPALANGFPSAHEALKSAPSSFAPAGKSLCFRPGPALP 375

Query: 362 PLAPRGRGPGPRDP 375
               R   PGPR P
Sbjct: 376 STRARQSFPGPRQP 389


>gi|239754209 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 52/170 (30%), Positives = 70/170 (41%), Gaps = 30/170 (17%)

Query: 39  LARGHVPLVGRLQHDLGAALLQSKELVLAHLGGLARLERAAGPR---RRQVTALAVAEG- 94
           +A G + +VG   H++ A L+   E +L HL     L   A P     RQV A+A   G 
Sbjct: 100 VAHGRLHVVGDPLHEVAAVLVLHVEHLLVHL-----LHGHAAPEDGSHRQVAAVARVAGG 154

Query: 95  -HLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAVALVLEGEGDERVDAPGHVAVHGD 153
            H+ G E      G LG R +  ++A  A  G            G E V A       G 
Sbjct: 155 HHVLGVE---HLLGELGHRERPVLLAAPAGQG---------REAGHEEVQAR-----EGH 197

Query: 154 LVGRPRAQVRVALTGDAVDVDLRVHGDVHAPL---LGGGHRLREAGQAVL 200
            V R  AQV V L  +A       HG  H  +   +GGG +L+ A   V+
Sbjct: 198 HVHRQLAQVCVQLAREAQAGGDPAHGGRHQVVEVPVGGGGQLQGAEADVI 247


>gi|239748740 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 52/170 (30%), Positives = 70/170 (41%), Gaps = 30/170 (17%)

Query: 39  LARGHVPLVGRLQHDLGAALLQSKELVLAHLGGLARLERAAGPR---RRQVTALAVAEG- 94
           +A G + +VG   H++ A L+   E +L HL     L   A P     RQV A+A   G 
Sbjct: 100 VAHGRLHVVGDPLHEVAAVLVLHVEHLLVHL-----LHGHAAPEDGSHRQVAAVARVAGG 154

Query: 95  -HLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAVALVLEGEGDERVDAPGHVAVHGD 153
            H+ G E      G LG R +  ++A  A  G            G E V A       G 
Sbjct: 155 HHVLGVE---HLLGELGHRERPVLLAAPAGQG---------REAGHEEVQAR-----EGH 197

Query: 154 LVGRPRAQVRVALTGDAVDVDLRVHGDVHAPL---LGGGHRLREAGQAVL 200
            V R  AQV V L  +A       HG  H  +   +GGG +L+ A   V+
Sbjct: 198 HVHRQLAQVCVQLAREAQAGGDPAHGGRHQVVEVPVGGGGQLQGAEADVI 247


>gi|33286436 gametogenetin [Homo sapiens]
          Length = 652

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 14/83 (16%)

Query: 310 VAGPCGGAPAP---LFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSAT--RPRPP----V 360
           ++GP G  P P   +    GP  P+ AL      AP TF      +    RP PP    +
Sbjct: 383 LSGPWGSPPPPPEQIHSAPGPRRPAPAL-----LAPPTFIFPAPTNGEPMRPGPPGLQEL 437

Query: 361 PPLAPRGRGPGPRDPALRPPLLP 383
           PPL P    P  + PAL+P  LP
Sbjct: 438 PPLPPPTPPPTLQPPALQPTPLP 460


>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
          Length = 1332

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 12/99 (12%)

Query: 302  PLRGPGRWVAGPCGGAPAPLFGCRG-----------PHAPSAALHKAQLAAPRTFYRRGD 350
            PLR P  ++  P    P PL                P++PS          PR  Y    
Sbjct: 1220 PLRPPEHFINCPFNLQPPPLGHLHRDSDWLRDISTCPNSPSTPPSTPSPRVPRRCYVLSS 1279

Query: 351  VSATRPRPPVPPLAPRGRGPGPRDPALRPPLLPRRCSHP 389
                   PP PP+ PR +   P  P L P    R  SHP
Sbjct: 1280 SQNNLAHPPAPPVPPR-QNSSPHLPKLPPKTYKRELSHP 1317


>gi|122937321 UNC homeobox [Homo sapiens]
          Length = 531

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 47/158 (29%), Positives = 53/158 (33%), Gaps = 38/158 (24%)

Query: 262 FTLNPNASAVRYLLPQLM---------RPNWICTASAVPLAVMVAVDERPLRGPGRWVAG 312
           F L P    + +L+PQ            P     A AVP A           GPG     
Sbjct: 378 FLLYPITQPLGFLVPQAALKGGAGLEPAPKDAPPAPAVPPAPPAQASFGAFSGPG----- 432

Query: 313 PCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATR-------------PRPP 359
              GAP   F  R P A   A   A   AP  F      +AT              P PP
Sbjct: 433 ---GAPDSAFARRSPDA--VASPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAGPAPP 487

Query: 360 VPPLAPRGRGPGPRDPALRPPLLPRRCSHP-TGVLAAP 396
            P  +PR   PGPR P+  P   P  C  P  G  A P
Sbjct: 488 PPAPSPR---PGPRPPS--PAEEPATCGVPEPGAAAGP 520


>gi|148727370 immediate early response 5-like [Homo sapiens]
          Length = 404

 Score = 36.6 bits (83), Expect = 0.041
 Identities = 34/92 (36%), Positives = 37/92 (40%), Gaps = 19/92 (20%)

Query: 313 PCGGAPA--PLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRP-PVPPLAPRGRG 369
           P GGA A   L GC     P  A H+ Q   P             P P P+PP AP    
Sbjct: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQ-------PGPAPLPLPLPPPAPAALC 198

Query: 370 PGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
           P       R P  P  CS P G  AAP +AAA
Sbjct: 199 P-------RDPRAPAACSAPPG--AAPPAAAA 221


>gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 66/186 (35%), Positives = 79/186 (42%), Gaps = 26/186 (13%)

Query: 34  ASPLTLARGHVPLVGRLQH---DLGAALLQSKELVLAHLGGLARLE----RAAGPRRRQV 86
           A     AR  V LV R+     D   AL ++   + A +G LAR+     R  G     +
Sbjct: 152 AEAFAAARTLVRLVARVDAAVADQVGALDKALAALDARVGLLARVRALVLRERGEVAEAL 211

Query: 87  TALAVAEGHLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAV-ALVLEGEGDERVDAP 145
            ALA AEG LAG   Q V   R+      P +A  A VG L  V ALV E   + R DA 
Sbjct: 212 LALATAEGLLAGVHAQVVHQVRV-TPEALPALA--AHVGPLTRVRALVRE---EVRADAE 265

Query: 146 GHVAV--HGDLVGRPRA----QVRV---ALTGDAVDVDLRVHGDVHAPLLGGGHRLREAG 196
           G  A+  H  L+ R  A    QVR    AL   A  V L    D    L+ G  R    G
Sbjct: 266 GLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDA---LVVGQMRAEAEG 322

Query: 197 QAVLGA 202
            A LGA
Sbjct: 323 LAALGA 328


>gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 66/186 (35%), Positives = 79/186 (42%), Gaps = 26/186 (13%)

Query: 34  ASPLTLARGHVPLVGRLQH---DLGAALLQSKELVLAHLGGLARLE----RAAGPRRRQV 86
           A     AR  V LV R+     D   AL ++   + A +G LAR+     R  G     +
Sbjct: 152 AEAFAAARTLVRLVARVDAAVADQVGALDKALAALDARVGLLARVRALVLRERGEVAEAL 211

Query: 87  TALAVAEGHLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAV-ALVLEGEGDERVDAP 145
            ALA AEG LAG   Q V   R+      P +A  A VG L  V ALV E   + R DA 
Sbjct: 212 LALATAEGLLAGVHAQVVHQVRV-TPEALPALA--AHVGPLTRVRALVRE---EVRADAE 265

Query: 146 GHVAV--HGDLVGRPRA----QVRV---ALTGDAVDVDLRVHGDVHAPLLGGGHRLREAG 196
           G  A+  H  L+ R  A    QVR    AL   A  V L    D    L+ G  R    G
Sbjct: 266 GLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDA---LVVGQMRAEAEG 322

Query: 197 QAVLGA 202
            A LGA
Sbjct: 323 LAALGA 328


>gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 36.2 bits (82), Expect = 0.054
 Identities = 66/186 (35%), Positives = 79/186 (42%), Gaps = 26/186 (13%)

Query: 34  ASPLTLARGHVPLVGRLQH---DLGAALLQSKELVLAHLGGLARLE----RAAGPRRRQV 86
           A     AR  V LV R+     D   AL ++   + A +G LAR+     R  G     +
Sbjct: 152 AEAFAAARTLVRLVARVDAAVADQVGALDKALAALDARVGLLARVRALVLRERGEVAEAL 211

Query: 87  TALAVAEGHLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAV-ALVLEGEGDERVDAP 145
            ALA AEG LAG   Q V   R+      P +A  A VG L  V ALV E   + R DA 
Sbjct: 212 LALATAEGLLAGVHAQVVHQVRV-TPEALPALA--AHVGPLTRVRALVRE---EVRADAE 265

Query: 146 GHVAV--HGDLVGRPRA----QVRV---ALTGDAVDVDLRVHGDVHAPLLGGGHRLREAG 196
           G  A+  H  L+ R  A    QVR    AL   A  V L    D    L+ G  R    G
Sbjct: 266 GLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDA---LVVGQMRAEAEG 322

Query: 197 QAVLGA 202
            A LGA
Sbjct: 323 LAALGA 328


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 4/76 (5%)

Query: 316 GAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPVPPLAPRGRGPGPRDP 375
           G P P  G   P  P A      L  P      G      P PP PP  P   G GP  P
Sbjct: 358 GPPPPGRGGPPPPPPPATGRSGPLPPPPP----GAGGPPMPPPPPPPPPPPSSGNGPAPP 413

Query: 376 ALRPPLLPRRCSHPTG 391
            L P L+P     P G
Sbjct: 414 PLPPALVPAGGLAPGG 429


>gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo
           sapiens]
          Length = 321

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 305 GPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKA----QLAAPRTFYRRGDVSATRPR--- 357
           G GRWV+ P        F C  P A  AAL       + + PR    R D  + R     
Sbjct: 220 GRGRWVSAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAER 279

Query: 358 -PPVPPLAPRGRGPGPRD 374
            P  PP +PR  GPG RD
Sbjct: 280 SPRCPPGSPRKAGPGRRD 297


>gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo
           sapiens]
          Length = 321

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 305 GPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKA----QLAAPRTFYRRGDVSATRPR--- 357
           G GRWV+ P        F C  P A  AAL       + + PR    R D  + R     
Sbjct: 220 GRGRWVSAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAER 279

Query: 358 -PPVPPLAPRGRGPGPRD 374
            P  PP +PR  GPG RD
Sbjct: 280 SPRCPPGSPRKAGPGRRD 297


>gi|48375167 microtubule-associated protein 6 isoform 2 [Homo
           sapiens]
          Length = 439

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 16/118 (13%)

Query: 287 ASAVPLAVMVAVDERPLRGPGRWVAGPCGGAPAPLFGCRGPHA------PSAALHKAQLA 340
           A A P A  VA++ +P +G    VA   G AP P  G R P A      P   L     +
Sbjct: 56  ALAPPSARAVAIETQPAQGELDAVARATGPAPGPT-GEREPAAGPGRSGPGPGLGSGSTS 114

Query: 341 APRTFYRRGDVSATRPRPPVPPLAPRGR-----GPGPRDPALRPPL----LPRRCSHP 389
            P     R D  A + + P P   PR        P  R+   +       LPRR  HP
Sbjct: 115 GPADSVMRQDYRAWKVQRPEPSCRPRSEYQPSDAPFERETQYQKDFRAWPLPRRGDHP 172


>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
           sapiens]
          Length = 813

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 16/118 (13%)

Query: 287 ASAVPLAVMVAVDERPLRGPGRWVAGPCGGAPAPLFGCRGPHA------PSAALHKAQLA 340
           A A P A  VA++ +P +G    VA   G AP P  G R P A      P   L     +
Sbjct: 56  ALAPPSARAVAIETQPAQGELDAVARATGPAPGPT-GEREPAAGPGRSGPGPGLGSGSTS 114

Query: 341 APRTFYRRGDVSATRPRPPVPPLAPRGR-----GPGPRDPALRPPL----LPRRCSHP 389
            P     R D  A + + P P   PR        P  R+   +       LPRR  HP
Sbjct: 115 GPADSVMRQDYRAWKVQRPEPSCRPRSEYQPSDAPFERETQYQKDFRAWPLPRRGDHP 172


>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
           [Homo sapiens]
          Length = 674

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 19/77 (24%)

Query: 323 GCRGPHAPSAALH-----KAQLAAPRTFY----------RRGDVSATRPRPPVPPLAPRG 367
           G  G   P AA+      K+Q      FY          R G  SA  P PP PP  P G
Sbjct: 5   GAEGGSGPGAAMGDCAEIKSQFRTREGFYKLLPGDGAARRSGPASAQTPVPPQPPQPPPG 64

Query: 368 ----RGPGPRDPALRPP 380
                GPG   PA  PP
Sbjct: 65  PASASGPGAAGPASSPP 81


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 35/101 (34%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 304 RGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPVP-P 362
           R  G W  GP GGA       R    P  +  K Q   P +   RG      PR  +P P
Sbjct: 47  RRDGGW--GPPGGAGDHQTLQRASLLPGGSADKDQEREP-SLAARGTAPPAPPRQCLPTP 103

Query: 363 LAPRGRGPGPR-DPALRPPLLPRRCS-HPTGVLAAPRSAAA 401
             P G G  PR  P   PP  PR  +  P G+  AP  A A
Sbjct: 104 CPPLGHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPA 144



 Score = 35.4 bits (80), Expect = 0.092
 Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 355 RPRPPV---PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPR 397
           RPRPP    PP  PR   PGPR     PP  P R + P G  AA R
Sbjct: 112 RPRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPAR-TGPAGKAAADR 156


>gi|154146199 sal-like 3 [Homo sapiens]
          Length = 1300

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 5/112 (4%)

Query: 288 SAVPLAVMVAVDERPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYR 347
           S  P A   A    P + PG        GAPA      GP AP+A      L+ P +   
Sbjct: 241 SLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPES--- 297

Query: 348 RGDVSATRPRPPVPPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSA 399
            G  +   P  P  P AP    P P  PA  P       S P      P  A
Sbjct: 298 -GASTPGGPAEPSAPAAP-SAAPAPAAPAPAPAPQSAASSQPQSASTPPALA 347


>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 35/108 (32%), Positives = 39/108 (36%), Gaps = 18/108 (16%)

Query: 303 LRGPG------RWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRP 356
           L GPG      R   G  G +P  L G RGP A  A           T   +   S T P
Sbjct: 122 LLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVP 181

Query: 357 RPP--------VPPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAP 396
             P        +P LAP    PGP DP  R P     C  P+  L  P
Sbjct: 182 GLPPASLQPLRLPYLAP----PGPHDPTSRGPGRLLTCEPPSRKLPPP 225


>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 23/120 (19%)

Query: 303 LRGPGRWVAGPCGGAPAPLFGCRGPHAPS---AALHKAQLAAPRTFYRR--------GDV 351
           L GP   VAG  G  PAP      P AP    AA   + LAA +   R         GD+
Sbjct: 35  LPGPALVVAGLDGIRPAP--AAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDI 92

Query: 352 SATRP---RPPVPPLAPRGRGPGP-----RDPALRP--PLLPRRCSHPTGVLAAPRSAAA 401
           ++  P   +P   P  P    PGP       P  RP  P  P R   P   LAAPR   A
Sbjct: 93  ASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLA 152


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,977,474
Number of Sequences: 37866
Number of extensions: 1012303
Number of successful extensions: 6396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 5654
Number of HSP's gapped (non-prelim): 846
length of query: 401
length of database: 18,247,518
effective HSP length: 104
effective length of query: 297
effective length of database: 14,309,454
effective search space: 4249907838
effective search space used: 4249907838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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