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Search of human proteins with 239749048
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo
sapiens]
(401 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo ... 804 0.0
gi|239743075 PREDICTED: hypothetical protein XP_002342752 [Homo ... 804 0.0
gi|239508721 PREDICTED: hypothetical protein [Homo sapiens] 804 0.0
gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens] 40 0.003
gi|169179422 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|150170670 piccolo isoform 2 [Homo sapiens] 40 0.005
gi|150378539 piccolo isoform 1 [Homo sapiens] 40 0.005
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 39 0.006
gi|154146231 DMRT-like family A2 [Homo sapiens] 39 0.006
gi|148613882 homeobox A4 [Homo sapiens] 39 0.008
gi|223633935 hypothetical protein LOC254427 [Homo sapiens] 37 0.032
gi|239754209 PREDICTED: hypothetical protein [Homo sapiens] 37 0.032
gi|239748740 PREDICTED: hypothetical protein [Homo sapiens] 37 0.032
gi|33286436 gametogenetin [Homo sapiens] 37 0.032
gi|154689780 son of sevenless homolog 2 [Homo sapiens] 37 0.041
gi|122937321 UNC homeobox [Homo sapiens] 37 0.041
gi|148727370 immediate early response 5-like [Homo sapiens] 37 0.041
gi|169160919 PREDICTED: hypothetical protein [Homo sapiens] 36 0.054
gi|169162159 PREDICTED: hypothetical protein [Homo sapiens] 36 0.054
gi|169161152 PREDICTED: hypothetical protein [Homo sapiens] 36 0.054
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 36 0.071
gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ... 36 0.071
gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ... 36 0.071
gi|48375167 microtubule-associated protein 6 isoform 2 [Homo sap... 36 0.071
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap... 36 0.071
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 36 0.071
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 35 0.092
gi|154146199 sal-like 3 [Homo sapiens] 35 0.12
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 35 0.16
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 35 0.16
>gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo
sapiens]
Length = 401
Score = 804 bits (2077), Expect = 0.0
Identities = 401/401 (100%), Positives = 401/401 (100%)
Query: 1 MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ
Sbjct: 1 MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
Query: 61 SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ
Sbjct: 61 SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
Query: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD
Sbjct: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
Query: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA
Sbjct: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
Query: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE
Sbjct: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
Query: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV
Sbjct: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
Query: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA
Sbjct: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
>gi|239743075 PREDICTED: hypothetical protein XP_002342752 [Homo
sapiens]
Length = 401
Score = 804 bits (2077), Expect = 0.0
Identities = 401/401 (100%), Positives = 401/401 (100%)
Query: 1 MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ
Sbjct: 1 MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
Query: 61 SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ
Sbjct: 61 SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
Query: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD
Sbjct: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
Query: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA
Sbjct: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
Query: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE
Sbjct: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
Query: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV
Sbjct: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
Query: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA
Sbjct: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
>gi|239508721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 401
Score = 804 bits (2077), Expect = 0.0
Identities = 401/401 (100%), Positives = 401/401 (100%)
Query: 1 MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ
Sbjct: 1 MPADQRRRERERAGGWRGAGGVRFVHGPGEAGAASPLTLARGHVPLVGRLQHDLGAALLQ 60
Query: 61 SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ
Sbjct: 61 SKELVLAHLGGLARLERAAGPRRRQVTALAVAEGHLAGAELQRVASGRLGARHQAPVVAQ 120
Query: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD
Sbjct: 121 EAVVGGLHAVALVLEGEGDERVDAPGHVAVHGDLVGRPRAQVRVALTGDAVDVDLRVHGD 180
Query: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA
Sbjct: 181 VHAPLLGGGHRLREAGQAVLGAAEVAPVRLGLQRPATVVVRHDEETAVGTGHLALAGHVA 240
Query: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE
Sbjct: 241 VLVRRQVAAQICFFFRLLADAFTLNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDE 300
Query: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV
Sbjct: 301 RPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPV 360
Query: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA
Sbjct: 361 PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
>gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]
Length = 478
Score = 40.4 bits (93), Expect = 0.003
Identities = 33/96 (34%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 311 AGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRP------------RP 358
A GGAP P G GP P+A A+ A P+ RRGD + RP
Sbjct: 3 AAAAGGAPGPAPGPAGPPPPAAPTSAAR-APPQALRRRGDSRRRQAALFFLNNISLDGRP 61
Query: 359 PVPPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLA 394
P L P G P P R P P PTG+ A
Sbjct: 62 --PSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPA 95
>gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]
Length = 645
Score = 39.7 bits (91), Expect = 0.005
Identities = 36/98 (36%), Positives = 37/98 (37%), Gaps = 9/98 (9%)
Query: 304 RGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFY--RRGDVSATRPRPPVP 361
RG W A A A L G PSA APR RG SA PP P
Sbjct: 533 RGHSPWAALTDSAAGAELPGL----VPSAPRRPGSATAPRPLRVPGRGAQSAEPGTPPSP 588
Query: 362 PLAPRGRGPG---PRDPALRPPLLPRRCSHPTGVLAAP 396
P A G GPG R PA PP L R + P P
Sbjct: 589 PGAEHGGGPGLILLRFPAAPPPRLQARPAAPQTCAGCP 626
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 39.7 bits (91), Expect = 0.005
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 340 AAPRTFYRRG--DVSATRPRPPVPPLAPRGRGPGPRDPALRPPLLPR 384
A PR F+R D+SA P PP PP P P P P L PP P+
Sbjct: 2388 AKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPK 2434
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 39.7 bits (91), Expect = 0.005
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 340 AAPRTFYRRG--DVSATRPRPPVPPLAPRGRGPGPRDPALRPPLLPR 384
A PR F+R D+SA P PP PP P P P P L PP P+
Sbjct: 2388 AKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPK 2434
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 39.3 bits (90), Expect = 0.006
Identities = 42/148 (28%), Positives = 57/148 (38%), Gaps = 18/148 (12%)
Query: 264 LNPNASAVRYLLPQLMRPNWICTASAVPLAVMVAVDERPLRGPGRWVAGPCGGAPAPLFG 323
L P++S+ P C + + + ++ RP R P R GP +P+
Sbjct: 1025 LQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSR-TPGPPSAQSSPIDA 1083
Query: 324 CRGPHAPSAALHKAQLAAP-RTFYRRGDVSATRPRPPVPPLAPRGR----------GPGP 372
P P AQ P R R TRP PP P P GR GPGP
Sbjct: 1084 --QPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGRSQPSPQAGLAGPGP 1141
Query: 373 RDPALRPPLLPRRCSHPTGVLAAPRSAA 400
+ P +P R GV++AP+S A
Sbjct: 1142 AGYSTARPTIPPR----AGVISAPQSHA 1165
>gi|154146231 DMRT-like family A2 [Homo sapiens]
Length = 542
Score = 39.3 bits (90), Expect = 0.006
Identities = 29/71 (40%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 312 GPCGGAPAPLFG-CRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPVPPLAPRG--R 368
GP GAPA G G A L K L P+T + G + P PPV PL+P G
Sbjct: 167 GPGAGAPAGTGGGAAGAGGSEAKLQKFDLF-PKTLLQAGRPGSPLP-PPVKPLSPDGADS 224
Query: 369 GPGPRDPALRP 379
GPG P +RP
Sbjct: 225 GPGTSSPEVRP 235
>gi|148613882 homeobox A4 [Homo sapiens]
Length = 320
Score = 38.9 bits (89), Expect = 0.008
Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 16/93 (17%)
Query: 325 RGPHAPSAALHKAQLAAPRTF---YRRGDVSATRPRPPVPPLAPRGRG------------ 369
R P P+AAL+ A AA + YR G P+P PP +G
Sbjct: 80 REPAYPAAALYPAHGAADTAYPYGYRGGASPGRPPQPEQPPAQAKGPAHGLHASHVLQPQ 139
Query: 370 -PGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
P P P PP PRRC P +A
Sbjct: 140 LPPPLQPRAVPPAAPRRCEAAPATPGVPAGGSA 172
>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
Length = 435
Score = 37.0 bits (84), Expect = 0.032
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 307 GRWVAGPCGGAPAPLFGCRGPHAPSAA-----LHKAQLAAPRTFYRRGDVSATRPRPPVP 361
GR + GP A G + P P+ A H+A +AP +F G RP P +P
Sbjct: 319 GRGLPGPAESLRA---GGQAPRGPALANGFPSAHEALKSAPSSFAPAGKSLCFRPGPALP 375
Query: 362 PLAPRGRGPGPRDP 375
R PGPR P
Sbjct: 376 STRARQSFPGPRQP 389
>gi|239754209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 37.0 bits (84), Expect = 0.032
Identities = 52/170 (30%), Positives = 70/170 (41%), Gaps = 30/170 (17%)
Query: 39 LARGHVPLVGRLQHDLGAALLQSKELVLAHLGGLARLERAAGPR---RRQVTALAVAEG- 94
+A G + +VG H++ A L+ E +L HL L A P RQV A+A G
Sbjct: 100 VAHGRLHVVGDPLHEVAAVLVLHVEHLLVHL-----LHGHAAPEDGSHRQVAAVARVAGG 154
Query: 95 -HLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAVALVLEGEGDERVDAPGHVAVHGD 153
H+ G E G LG R + ++A A G G E V A G
Sbjct: 155 HHVLGVE---HLLGELGHRERPVLLAAPAGQG---------REAGHEEVQAR-----EGH 197
Query: 154 LVGRPRAQVRVALTGDAVDVDLRVHGDVHAPL---LGGGHRLREAGQAVL 200
V R AQV V L +A HG H + +GGG +L+ A V+
Sbjct: 198 HVHRQLAQVCVQLAREAQAGGDPAHGGRHQVVEVPVGGGGQLQGAEADVI 247
>gi|239748740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 37.0 bits (84), Expect = 0.032
Identities = 52/170 (30%), Positives = 70/170 (41%), Gaps = 30/170 (17%)
Query: 39 LARGHVPLVGRLQHDLGAALLQSKELVLAHLGGLARLERAAGPR---RRQVTALAVAEG- 94
+A G + +VG H++ A L+ E +L HL L A P RQV A+A G
Sbjct: 100 VAHGRLHVVGDPLHEVAAVLVLHVEHLLVHL-----LHGHAAPEDGSHRQVAAVARVAGG 154
Query: 95 -HLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAVALVLEGEGDERVDAPGHVAVHGD 153
H+ G E G LG R + ++A A G G E V A G
Sbjct: 155 HHVLGVE---HLLGELGHRERPVLLAAPAGQG---------REAGHEEVQAR-----EGH 197
Query: 154 LVGRPRAQVRVALTGDAVDVDLRVHGDVHAPL---LGGGHRLREAGQAVL 200
V R AQV V L +A HG H + +GGG +L+ A V+
Sbjct: 198 HVHRQLAQVCVQLAREAQAGGDPAHGGRHQVVEVPVGGGGQLQGAEADVI 247
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 37.0 bits (84), Expect = 0.032
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 310 VAGPCGGAPAP---LFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSAT--RPRPP----V 360
++GP G P P + GP P+ AL AP TF + RP PP +
Sbjct: 383 LSGPWGSPPPPPEQIHSAPGPRRPAPAL-----LAPPTFIFPAPTNGEPMRPGPPGLQEL 437
Query: 361 PPLAPRGRGPGPRDPALRPPLLP 383
PPL P P + PAL+P LP
Sbjct: 438 PPLPPPTPPPTLQPPALQPTPLP 460
>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
Length = 1332
Score = 36.6 bits (83), Expect = 0.041
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 12/99 (12%)
Query: 302 PLRGPGRWVAGPCGGAPAPLFGCRG-----------PHAPSAALHKAQLAAPRTFYRRGD 350
PLR P ++ P P PL P++PS PR Y
Sbjct: 1220 PLRPPEHFINCPFNLQPPPLGHLHRDSDWLRDISTCPNSPSTPPSTPSPRVPRRCYVLSS 1279
Query: 351 VSATRPRPPVPPLAPRGRGPGPRDPALRPPLLPRRCSHP 389
PP PP+ PR + P P L P R SHP
Sbjct: 1280 SQNNLAHPPAPPVPPR-QNSSPHLPKLPPKTYKRELSHP 1317
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 36.6 bits (83), Expect = 0.041
Identities = 47/158 (29%), Positives = 53/158 (33%), Gaps = 38/158 (24%)
Query: 262 FTLNPNASAVRYLLPQLM---------RPNWICTASAVPLAVMVAVDERPLRGPGRWVAG 312
F L P + +L+PQ P A AVP A GPG
Sbjct: 378 FLLYPITQPLGFLVPQAALKGGAGLEPAPKDAPPAPAVPPAPPAQASFGAFSGPG----- 432
Query: 313 PCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATR-------------PRPP 359
GAP F R P A A A AP F +AT P PP
Sbjct: 433 ---GAPDSAFARRSPDA--VASPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAGPAPP 487
Query: 360 VPPLAPRGRGPGPRDPALRPPLLPRRCSHP-TGVLAAP 396
P +PR PGPR P+ P P C P G A P
Sbjct: 488 PPAPSPR---PGPRPPS--PAEEPATCGVPEPGAAAGP 520
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 36.6 bits (83), Expect = 0.041
Identities = 34/92 (36%), Positives = 37/92 (40%), Gaps = 19/92 (20%)
Query: 313 PCGGAPA--PLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRP-PVPPLAPRGRG 369
P GGA A L GC P A H+ Q P P P P+PP AP
Sbjct: 146 PAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQ-------PGPAPLPLPLPPPAPAALC 198
Query: 370 PGPRDPALRPPLLPRRCSHPTGVLAAPRSAAA 401
P R P P CS P G AAP +AAA
Sbjct: 199 P-------RDPRAPAACSAPPG--AAPPAAAA 221
>gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 36.2 bits (82), Expect = 0.054
Identities = 66/186 (35%), Positives = 79/186 (42%), Gaps = 26/186 (13%)
Query: 34 ASPLTLARGHVPLVGRLQH---DLGAALLQSKELVLAHLGGLARLE----RAAGPRRRQV 86
A AR V LV R+ D AL ++ + A +G LAR+ R G +
Sbjct: 152 AEAFAAARTLVRLVARVDAAVADQVGALDKALAALDARVGLLARVRALVLRERGEVAEAL 211
Query: 87 TALAVAEGHLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAV-ALVLEGEGDERVDAP 145
ALA AEG LAG Q V R+ P +A A VG L V ALV E + R DA
Sbjct: 212 LALATAEGLLAGVHAQVVHQVRV-TPEALPALA--AHVGPLTRVRALVRE---EVRADAE 265
Query: 146 GHVAV--HGDLVGRPRA----QVRV---ALTGDAVDVDLRVHGDVHAPLLGGGHRLREAG 196
G A+ H L+ R A QVR AL A V L D L+ G R G
Sbjct: 266 GLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDA---LVVGQMRAEAEG 322
Query: 197 QAVLGA 202
A LGA
Sbjct: 323 LAALGA 328
>gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 36.2 bits (82), Expect = 0.054
Identities = 66/186 (35%), Positives = 79/186 (42%), Gaps = 26/186 (13%)
Query: 34 ASPLTLARGHVPLVGRLQH---DLGAALLQSKELVLAHLGGLARLE----RAAGPRRRQV 86
A AR V LV R+ D AL ++ + A +G LAR+ R G +
Sbjct: 152 AEAFAAARTLVRLVARVDAAVADQVGALDKALAALDARVGLLARVRALVLRERGEVAEAL 211
Query: 87 TALAVAEGHLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAV-ALVLEGEGDERVDAP 145
ALA AEG LAG Q V R+ P +A A VG L V ALV E + R DA
Sbjct: 212 LALATAEGLLAGVHAQVVHQVRV-TPEALPALA--AHVGPLTRVRALVRE---EVRADAE 265
Query: 146 GHVAV--HGDLVGRPRA----QVRV---ALTGDAVDVDLRVHGDVHAPLLGGGHRLREAG 196
G A+ H L+ R A QVR AL A V L D L+ G R G
Sbjct: 266 GLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDA---LVVGQMRAEAEG 322
Query: 197 QAVLGA 202
A LGA
Sbjct: 323 LAALGA 328
>gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 36.2 bits (82), Expect = 0.054
Identities = 66/186 (35%), Positives = 79/186 (42%), Gaps = 26/186 (13%)
Query: 34 ASPLTLARGHVPLVGRLQH---DLGAALLQSKELVLAHLGGLARLE----RAAGPRRRQV 86
A AR V LV R+ D AL ++ + A +G LAR+ R G +
Sbjct: 152 AEAFAAARTLVRLVARVDAAVADQVGALDKALAALDARVGLLARVRALVLRERGEVAEAL 211
Query: 87 TALAVAEGHLAGAELQRVASGRLGARHQAPVVAQEAVVGGLHAV-ALVLEGEGDERVDAP 145
ALA AEG LAG Q V R+ P +A A VG L V ALV E + R DA
Sbjct: 212 LALATAEGLLAGVHAQVVHQVRV-TPEALPALA--AHVGPLTRVRALVRE---EVRADAE 265
Query: 146 GHVAV--HGDLVGRPRA----QVRV---ALTGDAVDVDLRVHGDVHAPLLGGGHRLREAG 196
G A+ H L+ R A QVR AL A V L D L+ G R G
Sbjct: 266 GLAALGAHVGLLARVHALVLHQVRAPAEALAALATAVRLLARVDA---LVVGQMRAEAEG 322
Query: 197 QAVLGA 202
A LGA
Sbjct: 323 LAALGA 328
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 35.8 bits (81), Expect = 0.071
Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 316 GAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPVPPLAPRGRGPGPRDP 375
G P P G P P A L P G P PP PP P G GP P
Sbjct: 358 GPPPPGRGGPPPPPPPATGRSGPLPPPPP----GAGGPPMPPPPPPPPPPPSSGNGPAPP 413
Query: 376 ALRPPLLPRRCSHPTG 391
L P L+P P G
Sbjct: 414 PLPPALVPAGGLAPGG 429
>gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo
sapiens]
Length = 321
Score = 35.8 bits (81), Expect = 0.071
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 305 GPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKA----QLAAPRTFYRRGDVSATRPR--- 357
G GRWV+ P F C P A AAL + + PR R D + R
Sbjct: 220 GRGRWVSAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAER 279
Query: 358 -PPVPPLAPRGRGPGPRD 374
P PP +PR GPG RD
Sbjct: 280 SPRCPPGSPRKAGPGRRD 297
>gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo
sapiens]
Length = 321
Score = 35.8 bits (81), Expect = 0.071
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 305 GPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKA----QLAAPRTFYRRGDVSATRPR--- 357
G GRWV+ P F C P A AAL + + PR R D + R
Sbjct: 220 GRGRWVSAPLPPKGTETFFCVLPSALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAER 279
Query: 358 -PPVPPLAPRGRGPGPRD 374
P PP +PR GPG RD
Sbjct: 280 SPRCPPGSPRKAGPGRRD 297
>gi|48375167 microtubule-associated protein 6 isoform 2 [Homo
sapiens]
Length = 439
Score = 35.8 bits (81), Expect = 0.071
Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 16/118 (13%)
Query: 287 ASAVPLAVMVAVDERPLRGPGRWVAGPCGGAPAPLFGCRGPHA------PSAALHKAQLA 340
A A P A VA++ +P +G VA G AP P G R P A P L +
Sbjct: 56 ALAPPSARAVAIETQPAQGELDAVARATGPAPGPT-GEREPAAGPGRSGPGPGLGSGSTS 114
Query: 341 APRTFYRRGDVSATRPRPPVPPLAPRGR-----GPGPRDPALRPPL----LPRRCSHP 389
P R D A + + P P PR P R+ + LPRR HP
Sbjct: 115 GPADSVMRQDYRAWKVQRPEPSCRPRSEYQPSDAPFERETQYQKDFRAWPLPRRGDHP 172
>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
sapiens]
Length = 813
Score = 35.8 bits (81), Expect = 0.071
Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 16/118 (13%)
Query: 287 ASAVPLAVMVAVDERPLRGPGRWVAGPCGGAPAPLFGCRGPHA------PSAALHKAQLA 340
A A P A VA++ +P +G VA G AP P G R P A P L +
Sbjct: 56 ALAPPSARAVAIETQPAQGELDAVARATGPAPGPT-GEREPAAGPGRSGPGPGLGSGSTS 114
Query: 341 APRTFYRRGDVSATRPRPPVPPLAPRGR-----GPGPRDPALRPPL----LPRRCSHP 389
P R D A + + P P PR P R+ + LPRR HP
Sbjct: 115 GPADSVMRQDYRAWKVQRPEPSCRPRSEYQPSDAPFERETQYQKDFRAWPLPRRGDHP 172
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 35.8 bits (81), Expect = 0.071
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 19/77 (24%)
Query: 323 GCRGPHAPSAALH-----KAQLAAPRTFY----------RRGDVSATRPRPPVPPLAPRG 367
G G P AA+ K+Q FY R G SA P PP PP P G
Sbjct: 5 GAEGGSGPGAAMGDCAEIKSQFRTREGFYKLLPGDGAARRSGPASAQTPVPPQPPQPPPG 64
Query: 368 ----RGPGPRDPALRPP 380
GPG PA PP
Sbjct: 65 PASASGPGAAGPASSPP 81
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 35.4 bits (80), Expect = 0.092
Identities = 35/101 (34%), Positives = 40/101 (39%), Gaps = 6/101 (5%)
Query: 304 RGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRPRPPVP-P 362
R G W GP GGA R P + K Q P + RG PR +P P
Sbjct: 47 RRDGGW--GPPGGAGDHQTLQRASLLPGGSADKDQEREP-SLAARGTAPPAPPRQCLPTP 103
Query: 363 LAPRGRGPGPR-DPALRPPLLPRRCS-HPTGVLAAPRSAAA 401
P G G PR P PP PR + P G+ AP A A
Sbjct: 104 CPPLGHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPA 144
Score = 35.4 bits (80), Expect = 0.092
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 355 RPRPPV---PPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPR 397
RPRPP PP PR PGPR PP P R + P G AA R
Sbjct: 112 RPRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPAR-TGPAGKAAADR 156
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 35.0 bits (79), Expect = 0.12
Identities = 33/112 (29%), Positives = 38/112 (33%), Gaps = 5/112 (4%)
Query: 288 SAVPLAVMVAVDERPLRGPGRWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYR 347
S P A A P + PG GAPA GP AP+A L+ P +
Sbjct: 241 SLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPES--- 297
Query: 348 RGDVSATRPRPPVPPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAPRSA 399
G + P P P AP P P PA P S P P A
Sbjct: 298 -GASTPGGPAEPSAPAAP-SAAPAPAAPAPAPAPQSAASSQPQSASTPPALA 347
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 34.7 bits (78), Expect = 0.16
Identities = 35/108 (32%), Positives = 39/108 (36%), Gaps = 18/108 (16%)
Query: 303 LRGPG------RWVAGPCGGAPAPLFGCRGPHAPSAALHKAQLAAPRTFYRRGDVSATRP 356
L GPG R G G +P L G RGP A A T + S T P
Sbjct: 122 LLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVP 181
Query: 357 RPP--------VPPLAPRGRGPGPRDPALRPPLLPRRCSHPTGVLAAP 396
P +P LAP PGP DP R P C P+ L P
Sbjct: 182 GLPPASLQPLRLPYLAP----PGPHDPTSRGPGRLLTCEPPSRKLPPP 225
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 34.7 bits (78), Expect = 0.16
Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 23/120 (19%)
Query: 303 LRGPGRWVAGPCGGAPAPLFGCRGPHAPS---AALHKAQLAAPRTFYRR--------GDV 351
L GP VAG G PAP P AP AA + LAA + R GD+
Sbjct: 35 LPGPALVVAGLDGIRPAP--AAAHPPAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDI 92
Query: 352 SATRP---RPPVPPLAPRGRGPGP-----RDPALRP--PLLPRRCSHPTGVLAAPRSAAA 401
++ P +P P P PGP P RP P P R P LAAPR A
Sbjct: 93 ASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLA 152
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,977,474
Number of Sequences: 37866
Number of extensions: 1012303
Number of successful extensions: 6396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 5654
Number of HSP's gapped (non-prelim): 846
length of query: 401
length of database: 18,247,518
effective HSP length: 104
effective length of query: 297
effective length of database: 14,309,454
effective search space: 4249907838
effective search space used: 4249907838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.