Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239748899
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748899 PREDICTED: hypothetical protein [Homo sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754351 PREDICTED: hypothetical protein [Homo sapiens] 374 e-104
gi|239748899 PREDICTED: hypothetical protein [Homo sapiens] 374 e-104
gi|239742923 PREDICTED: hypothetical protein XP_002342686 [Homo ... 374 e-104
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 39 0.002
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 34 0.073
gi|239755298 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo ... 33 0.12
gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo ... 33 0.12
gi|169171345 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|169172205 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|169170949 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|239508745 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Hom... 32 0.36
gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo ... 32 0.36
gi|239755949 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36
gi|239753144 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36
gi|239750452 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36
gi|239747710 PREDICTED: hypothetical protein XP_002348232 [Homo ... 32 0.36
gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo ... 32 0.36
gi|239741576 PREDICTED: hypothetical protein XP_002342255 [Homo ... 32 0.36
gi|18959276 forkhead box D4-like 1 [Homo sapiens] 31 0.47
gi|16418383 transcriptional repressor NAC1 [Homo sapiens] 31 0.62
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 31 0.62
gi|239755873 PREDICTED: hypothetical protein [Homo sapiens] 31 0.62
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 31 0.62
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 31 0.62
gi|33286436 gametogenetin [Homo sapiens] 31 0.62
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 30 0.81
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ... 30 0.81
>gi|239754351 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 374 bits (961), Expect = e-104
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA 60
MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA
Sbjct: 1 MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA 60
Query: 61 VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG 120
VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG
Sbjct: 61 VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG 120
Query: 121 CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE 174
CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE
Sbjct: 121 CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE 174
>gi|239748899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 374 bits (961), Expect = e-104
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA 60
MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA
Sbjct: 1 MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA 60
Query: 61 VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG 120
VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG
Sbjct: 61 VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG 120
Query: 121 CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE 174
CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE
Sbjct: 121 CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE 174
>gi|239742923 PREDICTED: hypothetical protein XP_002342686 [Homo
sapiens]
Length = 174
Score = 374 bits (961), Expect = e-104
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA 60
MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA
Sbjct: 1 MRQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARA 60
Query: 61 VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG 120
VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG
Sbjct: 61 VERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDTSWETGHGKNG 120
Query: 121 CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE 174
CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE
Sbjct: 121 CSVGKDEVGVVLWSLPDTHLDFTCVPVSLTSTSTCLLPCLVVQREGNPHVCHLE 174
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 38.9 bits (89), Expect = 0.002
Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 19 PRAGAGGRPPLLP------PSLPSIGTRWRRDAALKGATPTGLAQARAVERERDTWAPPW 72
P G G PP+ P P +P G D+ PTG + A V D+ APP
Sbjct: 619 PPTGDSGAPPVPPTGDSGAPPVPPTG-----DSGAPPVPPTGDSGAPPVPPTGDSGAPPV 673
Query: 73 PLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPDT 110
P A P PVP G G PTGD + P T
Sbjct: 674 PPTGD----AGPPPVPPTGDSGAPPVPPTGDSGAPPVT 707
Score = 36.6 bits (83), Expect = 0.011
Identities = 33/103 (32%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 19 PRAGAGGRPPLLP------PSLPSIGTRWRRDAALKGATPTGLAQARAVERERDTWAPPW 72
P G G PP+ P P +P G D+ PTG A V D+ APP
Sbjct: 641 PPTGDSGAPPVPPTGDSGAPPVPPTG-----DSGAPPVPPTGDAGPPPVPPTGDSGAPPV 695
Query: 73 PL-------PAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAP 108
P P + APVP G G PTGD +AP
Sbjct: 696 PPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEAAP 738
Score = 33.1 bits (74), Expect = 0.12
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 16/102 (15%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAVERERD 66
P+G A V P G G PP+ P D+ PTG + A V D
Sbjct: 576 PTGDSETAPV--PPTGDSGAPPVPPTG----------DSGAPPVPPTGDSGAPPVPPTGD 623
Query: 67 TWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAP 108
+ APP P + PVP G G PTGD + P
Sbjct: 624 SGAPPVPPTGDSGA----PPVPPTGDSGAPPVPPTGDSGAPP 661
Score = 27.7 bits (60), Expect = 5.2
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 44 DAALKGATPTGLAQARAVERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGD 103
D+ PTG ++ V D+ APP P + PVP G G PTGD
Sbjct: 568 DSEATPVPPTGDSETAPVPPTGDSGAPPVPPTGDSGA----PPVPPTGDSGAPPVPPTGD 623
Query: 104 FLSAP 108
+ P
Sbjct: 624 SGAPP 628
>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 753
Score = 33.9 bits (76), Expect = 0.073
Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 29/92 (31%)
Query: 6 GPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDA--------------ALKGAT 51
GPSG R+ T P A P PS+G+ W+R A AL+GA
Sbjct: 218 GPSGGTRRRSTTQPHPWAAEGP---ARGTPSVGSLWKRRARGRQLNRPWGRARLALQGAP 274
Query: 52 P-----------TGLAQ-ARAVERERDTWAPP 71
P TG A+ ARAV R WA P
Sbjct: 275 PSRGTSAATAACTGRARAARAVSLPRACWAGP 306
>gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 33.1 bits (74), Expect = 0.12
Identities = 36/91 (39%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGL---AQARAVER 63
P G +A V G GG PPL P G+ RR AA +GA TGL AQ RA
Sbjct: 112 PKGTNARACVL----GKGG-PPLRSP-----GSSGRRQAARRGAG-TGLYPAAQRRAPAP 160
Query: 64 ERDTWAPPWPLPAQVASLAFPAPVPGIGPCG 94
R P PA A L A PG P G
Sbjct: 161 LRPCAIPAPRRPAAAARLGSAARSPGAPPAG 191
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 33.1 bits (74), Expect = 0.12
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
Query: 7 PSGRRRQAGVTW-----PRAGAGGRPPLLPPSLPSIGTRWRRDA----ALKGATPTGLAQ 57
P+G+RR +G W P G GRP L P S R R +A + P G Q
Sbjct: 152 PNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQ 211
Query: 58 ARAVERERDTWAPP---WPL--PAQVASLAFPAPVPG 89
AR E P W + A SL P PG
Sbjct: 212 ARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPG 248
>gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo
sapiens]
Length = 250
Score = 33.1 bits (74), Expect = 0.12
Identities = 36/91 (39%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGL---AQARAVER 63
P G +A V G GG PPL P G+ RR AA +GA TGL AQ RA
Sbjct: 65 PKGTNARACVL----GKGG-PPLRSP-----GSSGRRQAARRGAG-TGLYPAAQRRAPAP 113
Query: 64 ERDTWAPPWPLPAQVASLAFPAPVPGIGPCG 94
R P PA A L A PG P G
Sbjct: 114 LRPCAIPAPRRPAAAARLGSAARSPGAPPAG 144
>gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo
sapiens]
Length = 250
Score = 33.1 bits (74), Expect = 0.12
Identities = 36/91 (39%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGL---AQARAVER 63
P G +A V G GG PPL P G+ RR AA +GA TGL AQ RA
Sbjct: 65 PKGTNARACVL----GKGG-PPLRSP-----GSSGRRQAARRGAG-TGLYPAAQRRAPAP 113
Query: 64 ERDTWAPPWPLPAQVASLAFPAPVPGIGPCG 94
R P PA A L A PG P G
Sbjct: 114 LRPCAIPAPRRPAAAARLGSAARSPGAPPAG 144
>gi|169171345 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 32.0 bits (71), Expect = 0.28
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPPL-LPPSLPSIGTR-WRRDAALKGATPTGLAQARAVERE 64
P+GR R W A A RPPL PP ++ TR + AL+ T G R + +
Sbjct: 12 PAGRERLQNKAWSPAPAPARPPLNQPPGGKALSTRALQPGGALEAGTRGGREGHRRLRQP 71
Query: 65 RDTWAPP 71
APP
Sbjct: 72 PTPSAPP 78
>gi|169172205 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 32.0 bits (71), Expect = 0.28
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPPL-LPPSLPSIGTR-WRRDAALKGATPTGLAQARAVERE 64
P+GR R W A A RPPL PP ++ TR + AL+ T G R + +
Sbjct: 12 PAGRERLQNKAWSPAPAPARPPLNQPPGGKALSTRALQPGGALEAGTRGGREGHRRLRQP 71
Query: 65 RDTWAPP 71
APP
Sbjct: 72 PTPSAPP 78
>gi|169170949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 32.0 bits (71), Expect = 0.28
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPPL-LPPSLPSIGTR-WRRDAALKGATPTGLAQARAVERE 64
P+GR R W A A RPPL PP ++ TR + AL+ T G R + +
Sbjct: 12 PAGRERLQNKAWSPAPAPARPPLNQPPGGKALSTRALQPGGALEAGTRGGREGHRRLRQP 71
Query: 65 RDTWAPP 71
APP
Sbjct: 72 PTPSAPP 78
>gi|239508745 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 32.0 bits (71), Expect = 0.28
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPPL-LPPSLPSIGTR-WRRDAALKGATPTGLAQARAVERE 64
P+GR R W A A RPPL PP ++ TR + AL+ T G R + +
Sbjct: 12 PAGRERLQNKAWSPAPAPARPPLNQPPGGKALSTRALQPGGALEAGTRGGREGHRRLRQP 71
Query: 65 RDTWAPP 71
APP
Sbjct: 72 PTPSAPP 78
>gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Homo
sapiens]
Length = 1134
Score = 31.6 bits (70), Expect = 0.36
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPP------LLPPSLPSIGTRWRRDAALKGATPTGLA-QAR 59
P G +Q P G +P LL PS+PS+G K +P A +
Sbjct: 532 PDGSSQQLSTVVPSMGTKPKPAGQQPRVLLSPSIPSVGQDQTLSPGSKQESPPAAAVRPF 591
Query: 60 AVERERDTWAPPWPLPAQVAS 80
+ +DT PP+ P VA+
Sbjct: 592 TPQPSKDTLLPPFRKPQTVAA 612
>gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo
sapiens]
Length = 1005
Score = 31.6 bits (70), Expect = 0.36
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 7 PSGRRRQAGVTWPRAGAGGRPP------LLPPSLPSIGTRWRRDAALKGATPTGLA-QAR 59
P G +Q P G +P LL PS+PS+G K +P A +
Sbjct: 403 PDGSSQQLSTVVPSMGTKPKPAGQQPRVLLSPSIPSVGQDQTLSPGSKQESPPAAAVRPF 462
Query: 60 AVERERDTWAPPWPLPAQVAS 80
+ +DT PP+ P VA+
Sbjct: 463 TPQPSKDTLLPPFRKPQTVAA 483
>gi|239755949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 524
Score = 31.6 bits (70), Expect = 0.36
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 27/91 (29%)
Query: 30 LPPSLPSI--------------GTRWRRDAALKGATPTGLAQARAVE---------RERD 66
LPPS PS+ GTR +A A P +++RA E R R
Sbjct: 405 LPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRT 464
Query: 67 TWAPPWPLPAQVASLAFPAPVP----GIGPC 93
PPWP P A+ P P G+G C
Sbjct: 465 RTTPPWPGPRCPATARTPVMGPSLHTGVGIC 495
>gi|239753144 PREDICTED: hypothetical protein [Homo sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 0.36
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 11 RRQAGVTWPRAGAGGRPPLLPPSLP 35
RR+ WPR A GR P LPP LP
Sbjct: 368 RRRVSDQWPRKRARGRGPELPPPLP 392
>gi|239750452 PREDICTED: hypothetical protein [Homo sapiens]
Length = 524
Score = 31.6 bits (70), Expect = 0.36
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 27/91 (29%)
Query: 30 LPPSLPSI--------------GTRWRRDAALKGATPTGLAQARAVE---------RERD 66
LPPS PS+ GTR +A A P +++RA E R R
Sbjct: 405 LPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRT 464
Query: 67 TWAPPWPLPAQVASLAFPAPVP----GIGPC 93
PPWP P A+ P P G+G C
Sbjct: 465 RTTPPWPGPRCPATARTPVMGPSLHTGVGIC 495
>gi|239747710 PREDICTED: hypothetical protein XP_002348232 [Homo
sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 0.36
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 11 RRQAGVTWPRAGAGGRPPLLPPSLP 35
RR+ WPR A GR P LPP LP
Sbjct: 368 RRRVSDQWPRKRARGRGPELPPPLP 392
>gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo
sapiens]
Length = 519
Score = 31.6 bits (70), Expect = 0.36
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 27/91 (29%)
Query: 30 LPPSLPSI--------------GTRWRRDAALKGATPTGLAQARAVE---------RERD 66
LPPS PS+ GTR +A A P +++RA E R R
Sbjct: 400 LPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRT 459
Query: 67 TWAPPWPLPAQVASLAFPAPVP----GIGPC 93
PPWP P A+ P P G+G C
Sbjct: 460 RTTPPWPGPRCPATARTPVMGPSLHTGVGIC 490
>gi|239741576 PREDICTED: hypothetical protein XP_002342255 [Homo
sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 0.36
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 11 RRQAGVTWPRAGAGGRPPLLPPSLP 35
RR+ WPR A GR P LPP LP
Sbjct: 368 RRRVSDQWPRKRARGRGPELPPPLP 392
>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
Length = 408
Score = 31.2 bits (69), Expect = 0.47
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 32 PSLPSIGTRWRRDAALKGATPTGLAQARAVERERDTWAP------PWPLPAQVASLAFPA 85
P P GT W D A + G R +R P P+PLPA A+L P
Sbjct: 172 PGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPR 231
Query: 86 PVPGIG 91
P P +G
Sbjct: 232 PGPLLG 237
>gi|16418383 transcriptional repressor NAC1 [Homo sapiens]
Length = 527
Score = 30.8 bits (68), Expect = 0.62
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 70 PPWPLPAQVASLAFPAPVPGIG-PCGGVHRLPTGDFLSAPDTSWETGHG 117
PP P A V + A PA G G P GGV G +S P TS T G
Sbjct: 219 PPPPQQAPVVAAAQPAVAAGAGQPAGGV--AAAGGVVSGPSTSERTSPG 265
>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
Length = 239
Score = 30.8 bits (68), Expect = 0.62
Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 16/113 (14%)
Query: 6 GPSGRRRQAGVTWPRAGAGGRPPL------LPPSLPSIGTRWR---RDAALKGATPTGLA 56
GP+GR +G + R GA GR P PP + + W+ R+ L G PT
Sbjct: 119 GPAGR--PSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPT--- 173
Query: 57 QARAVERERDTWAPPWPLPAQVASLAFPAPVPGIGPCGGVHRLPTGDFLSAPD 109
+A R PP PAQ+ LA PV + G R G LS D
Sbjct: 174 EAPPFPAPRVRAPPPPQRPAQLRLLAGLRPV--VTSLGVTRRRGRGAGLSLTD 224
>gi|239755873 PREDICTED: hypothetical protein [Homo sapiens]
Length = 577
Score = 30.8 bits (68), Expect = 0.62
Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 25/127 (19%)
Query: 8 SGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAVERERDT 67
+G ++ P A RP +L L + G R A K +P Q
Sbjct: 320 AGEQKDQSAQGPAAQPHPRPGIL--MLKTFGCRGFDAAVRKRKSPALSGQ---------- 367
Query: 68 WAPPWPLPAQVASLAFPAPVPGIGP-CGGVHRLPTGDFLSAPDTSWETGHGKNGCSVGKD 126
W P P PA + P GP C G+ P G HG GC +G+
Sbjct: 368 WQSPSPPPALAGAPPTPQQRQNFGPGCAGLSPRPEGP------------HGAGGCPMGEL 415
Query: 127 EVGVVLW 133
+ + +W
Sbjct: 416 GMSLRVW 422
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 30.8 bits (68), Expect = 0.62
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 2 RQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAV 61
R+ G GRRR+A T + G P + ++GT AL+G + A
Sbjct: 146 REGQGRGGRRRRAADTLFQLGPAWPALPAPAAGRALGTD--EPLALRGQCGPAARRGCAQ 203
Query: 62 ERERDT-WAPPWPLPAQVASLAFPAPVPGIGPCG 94
E+ R+ WAP PA +L AP G G G
Sbjct: 204 EQLRNAPWAPRAHSPAGRLALGLIAPRRGAGRAG 237
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 30.8 bits (68), Expect = 0.62
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 2 RQKAGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAV 61
R+ G GRRR+A T + G P + ++GT AL+G + A
Sbjct: 146 REGQGRGGRRRRAADTLFQLGPAWPALPAPAAGRALGTD--EPLALRGQCGPAARRGCAQ 203
Query: 62 ERERDT-WAPPWPLPAQVASLAFPAPVPGIGPCG 94
E+ R+ WAP PA +L AP G G G
Sbjct: 204 EQLRNAPWAPRAHSPAGRLALGLIAPRRGAGRAG 237
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 30.8 bits (68), Expect = 0.62
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 30/103 (29%)
Query: 6 GPSGRRRQAGVTWPRA---------GAGGRP---PLLPPSLPSIGTRWRRDAALKGATPT 53
GPS ++ AG PR G G P PL PP P R ++K P
Sbjct: 107 GPSKWQKPAGTPVPRIRRLLEASHRGQGDPPSLRPLKPPPPP-------RQLSVKDTVPR 159
Query: 54 GLAQARAVERERDTWAPPWPLPAQ--------VASLAFPAPVP 88
+Q +TW PP PLP++ +LA PA P
Sbjct: 160 APSQ---FPPPLETWKPPPPLPSERQPADRRITPALATPASPP 199
Score = 26.9 bits (58), Expect = 8.9
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 13/94 (13%)
Query: 5 AGPSGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAAL---KGATPTGLAQARAV 61
AG R+ Q RA R L+ P + S R R + ATP GL R
Sbjct: 10 AGGGSRKVQPS---DRAPDSRRTSLVEPEMTSQAMRLTRGLGVWFPGSATPPGLMVPREP 66
Query: 62 ERERDTW-------APPWPLPAQVASLAFPAPVP 88
+ T +P P P + A+++ P P P
Sbjct: 67 QASPSTLPLTLERPSPVMPPPEEAAAVSAPPPAP 100
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 30.4 bits (67), Expect = 0.81
Identities = 40/123 (32%), Positives = 47/123 (38%), Gaps = 21/123 (17%)
Query: 5 AGP-SGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAVER 63
AGP +GRRR+ G T+ A G P PP+ P+ A K L R
Sbjct: 728 AGPIAGRRRRRGWTFAAALRKGAPREQPPASPAASPCQAPRAPEKETEAPRL-------R 780
Query: 64 ERDTWAPPWPLPAQ------VASLAFPAPVPGIGPCGGVHRLPTG-----DFLSAPDTSW 112
R T P PLPA FPA G+G + PTG D SAP
Sbjct: 781 GRATAVAPRPLPAAPGFSGLCVLQPFPARSRGLGVPS--QQGPTGSPGCRDRASAPRAGA 838
Query: 113 ETG 115
E G
Sbjct: 839 EAG 841
>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
sapiens]
Length = 538
Score = 30.4 bits (67), Expect = 0.81
Identities = 40/123 (32%), Positives = 47/123 (38%), Gaps = 21/123 (17%)
Query: 5 AGP-SGRRRQAGVTWPRAGAGGRPPLLPPSLPSIGTRWRRDAALKGATPTGLAQARAVER 63
AGP +GRRR+ G T+ A G P PP+ P+ A K L R
Sbjct: 396 AGPIAGRRRRRGWTFAAALRKGAPREQPPASPAASPCQAPRAPEKETEAPRL-------R 448
Query: 64 ERDTWAPPWPLPAQ------VASLAFPAPVPGIGPCGGVHRLPTG-----DFLSAPDTSW 112
R T P PLPA FPA G+G + PTG D SAP
Sbjct: 449 GRATAVAPRPLPAAPGFSGLCVLQPFPARSRGLGVPS--QQGPTGSPGCRDRASAPRAGA 506
Query: 113 ETG 115
E G
Sbjct: 507 EAG 509
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,301,186
Number of Sequences: 37866
Number of extensions: 528383
Number of successful extensions: 2401
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 2265
Number of HSP's gapped (non-prelim): 290
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.