BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239748699 PREDICTED: hypothetical protein [Homo sapiens] (91 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754166 PREDICTED: hypothetical protein [Homo sapiens] 191 1e-49 gi|239748699 PREDICTED: hypothetical protein [Homo sapiens] 191 1e-49 gi|239742726 PREDICTED: hypothetical protein XP_002342623 [Homo ... 191 1e-49 gi|239757727 PREDICTED: similar to hCG2013141 [Homo sapiens] 43 5e-05 gi|239752218 PREDICTED: hypothetical protein XP_002348134 [Homo ... 43 5e-05 gi|188536004 zinc finger protein 469 [Homo sapiens] 38 0.002 gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 37 0.003 gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 37 0.003 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 36 0.006 gi|116256363 transmembrane protease, serine 13 [Homo sapiens] 36 0.008 gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013 gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013 gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent R... 35 0.017 gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 34 0.022 gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 34 0.022 gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 33 0.038 gi|7705353 three prime repair exonuclease 1 isoform a [Homo sapi... 33 0.050 gi|226371735 iroquois homeobox 3 [Homo sapiens] 33 0.050 gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 32 0.085 gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 32 0.085 gi|31711992 dihydrolipoamide S-acetyltransferase [Homo sapiens] 32 0.11 gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens] 32 0.11 gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 32 0.14 gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 32 0.14 gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 32 0.14 gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 32 0.14 gi|9257222 forkhead box O1 [Homo sapiens] 32 0.14 gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens] 32 0.14 gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens] 32 0.14 gi|30410035 late cornified envelope 5A [Homo sapiens] 32 0.14 >gi|239754166 PREDICTED: hypothetical protein [Homo sapiens] Length = 91 Score = 191 bits (485), Expect = 1e-49 Identities = 91/91 (100%), Positives = 91/91 (100%) Query: 1 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG Sbjct: 1 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 Query: 61 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE 91 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE Sbjct: 61 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE 91 >gi|239748699 PREDICTED: hypothetical protein [Homo sapiens] Length = 91 Score = 191 bits (485), Expect = 1e-49 Identities = 91/91 (100%), Positives = 91/91 (100%) Query: 1 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG Sbjct: 1 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 Query: 61 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE 91 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE Sbjct: 61 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE 91 >gi|239742726 PREDICTED: hypothetical protein XP_002342623 [Homo sapiens] Length = 91 Score = 191 bits (485), Expect = 1e-49 Identities = 91/91 (100%), Positives = 91/91 (100%) Query: 1 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG Sbjct: 1 MCRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 Query: 61 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE 91 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE Sbjct: 61 PIDCPRAEECRRKHHGTGRQLRLRPGSRTTE 91 >gi|239757727 PREDICTED: similar to hCG2013141 [Homo sapiens] Length = 133 Score = 43.1 bits (100), Expect = 5e-05 Identities = 19/29 (65%), Positives = 21/29 (72%) Query: 43 CAAPASPTSAAPCSTAPGPIDCPRAEECR 71 C A AS A+ CSTAPGP+ CPRAEE R Sbjct: 100 CEARASRMGASHCSTAPGPVHCPRAEEYR 128 >gi|239752218 PREDICTED: hypothetical protein XP_002348134 [Homo sapiens] Length = 133 Score = 43.1 bits (100), Expect = 5e-05 Identities = 19/29 (65%), Positives = 21/29 (72%) Query: 43 CAAPASPTSAAPCSTAPGPIDCPRAEECR 71 C A AS A+ CSTAPGP+ CPRAEE R Sbjct: 100 CEARASRMGASHCSTAPGPVHCPRAEEYR 128 >gi|188536004 zinc finger protein 469 [Homo sapiens] Length = 3925 Score = 38.1 bits (87), Expect = 0.002 Identities = 31/84 (36%), Positives = 34/84 (40%), Gaps = 3/84 (3%) Query: 7 SAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAA--PCSTAPGPIDC 64 S GS R AS G + L PAP A SPTSAA PCS P P + Sbjct: 2047 SRSGSEGRTPERASSPGLNKPLLATGDSPAPSVGDLAACAPSPTSAAHMPCSLGPLPRED 2106 Query: 65 PRAEECRRKHHGTGRQLRLRPGSR 88 P R + G G QL P R Sbjct: 2107 PLTSPSRAQ-GGLGGQLPASPSCR 2129 >gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] Length = 1013 Score = 37.0 bits (84), Expect = 0.003 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Query: 6 SSAGGSISRRALA--ASPRG-RARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPGPI 62 +S GGS + + A PR + R+ P PEPA A P SP +A +TA GP Sbjct: 497 ASTGGSQAASVITYTAPPRPPKKREYPPPPPEPA-------ATPTSPATAVSPATAAGPA 549 Query: 63 DCPRAEECRRKHHGTGRQL 81 EE + ++ GR L Sbjct: 550 MATTTEEAKGRNPRAGRTL 568 Score = 26.2 bits (56), Expect = 6.1 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 5/34 (14%) Query: 28 LQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPGP 61 L P + PAP A+ PASP P + PGP Sbjct: 439 LSPTLNTPAPVAM-----PASPPPGPPPAPEPGP 467 >gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] Length = 1013 Score = 37.0 bits (84), Expect = 0.003 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Query: 6 SSAGGSISRRALA--ASPRG-RARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPGPI 62 +S GGS + + A PR + R+ P PEPA A P SP +A +TA GP Sbjct: 497 ASTGGSQAASVITYTAPPRPPKKREYPPPPPEPA-------ATPTSPATAVSPATAAGPA 549 Query: 63 DCPRAEECRRKHHGTGRQL 81 EE + ++ GR L Sbjct: 550 MATTTEEAKGRNPRAGRTL 568 Score = 26.2 bits (56), Expect = 6.1 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 5/34 (14%) Query: 28 LQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPGP 61 L P + PAP A+ PASP P + PGP Sbjct: 439 LSPTLNTPAPVAM-----PASPPPGPPPAPEPGP 467 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 36.2 bits (82), Expect = 0.006 Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 10/91 (10%) Query: 5 PSSAGGSISRRALAASPRGRARDLQPAMPE--PAPDAVGSCAA-------PASPTSAAPC 55 PSS GS R +A +PA P+ PAP A SC A PA TS AP Sbjct: 2366 PSSTPGSKKSPPEPVDKRAKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPA 2425 Query: 56 STAPGPIDCPRAEECRRKHHGTGRQLRLRPG 86 P P+ ++ R + R RPG Sbjct: 2426 PLITMPATRPKPKKARAAEESGAKGPR-RPG 2455 Score = 27.7 bits (60), Expect = 2.1 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Query: 10 GSISRRALAASPRGRARD-----LQPAMPEPAPDAVGSCAAPAS-PTSAAPCS 56 GS +R A+A P G + L PEPAP + G+ A A P S P + Sbjct: 593 GSFARDAVAVRPGGCGKKSPFGGLGTMKPEPAPTSAGASRAQARLPHSGGPAA 645 >gi|116256363 transmembrane protease, serine 13 [Homo sapiens] Length = 567 Score = 35.8 bits (81), Expect = 0.008 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 3 RSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPGPI 62 R+PS AG S ++ + A +P GRA Q + + +P G+ ASP A+P T PG Sbjct: 13 RTPS-AGASPAQASPAGTPPGRASPAQASPAQASP--AGTPPGRASPAQASPAGTPPGRA 69 Query: 63 DCPRA 67 RA Sbjct: 70 SPGRA 74 >gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] Length = 737 Score = 35.0 bits (79), Expect = 0.013 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 15 RALAASPRGRARDLQPAMPEPAPDAVGSCAAPA-SPTSAAPCSTAPGPIDCPRAEECRRK 73 +AL A R + PAP A G C PA SP +A + G P A R Sbjct: 456 QALQAQLHARLPSRRARSSAPAPSAQGRCMTPARSPVAAREAARLRGARPGPAASAATRM 515 Query: 74 HHGTGRQLRLRPG 86 G+GR+ RPG Sbjct: 516 WQGSGRR---RPG 525 >gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] Length = 737 Score = 35.0 bits (79), Expect = 0.013 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Query: 15 RALAASPRGRARDLQPAMPEPAPDAVGSCAAPA-SPTSAAPCSTAPGPIDCPRAEECRRK 73 +AL A R + PAP A G C PA SP +A + G P A R Sbjct: 456 QALQAQLHARLPSRRARSSAPAPSAQGRCMTPARSPVAAREAARLRGARPGPAASAATRM 515 Query: 74 HHGTGRQLRLRPG 86 G+GR+ RPG Sbjct: 516 WQGSGRR---RPG 525 >gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Homo sapiens] Length = 1659 Score = 34.7 bits (78), Expect = 0.017 Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 12/57 (21%) Query: 30 PAMPEPAPDAVGSCA--APASPTSAAPCSTAPGPIDCPRAEECRRKHHGTGRQLRLR 84 P+ EP D G CA P +P +AAP S+ PGP R E RQLRLR Sbjct: 4 PSGSEPGGDGAGDCAHPDPRAPGAAAP-SSGPGPCAAARESE---------RQLRLR 50 >gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo sapiens] Length = 870 Score = 34.3 bits (77), Expect = 0.022 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 24/89 (26%) Query: 3 RSPSSAGGSISRRALAASPRGRARDL--------------QPAMPEPAPDAVGSCAAPAS 48 RSP+ + S LAA RG+ R L +PA P+ A +V PAS Sbjct: 762 RSPAKRAEAASM--LAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSV----PPAS 815 Query: 49 PTSAAPCSTAPGP----IDCPRAEECRRK 73 P A P + PGP D P E R+K Sbjct: 816 PARAPPATETPGPEKAATDLPAPETPRKK 844 >gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo sapiens] Length = 865 Score = 34.3 bits (77), Expect = 0.022 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 24/89 (26%) Query: 3 RSPSSAGGSISRRALAASPRGRARDL--------------QPAMPEPAPDAVGSCAAPAS 48 RSP+ + S LAA RG+ R L +PA P+ A +V PAS Sbjct: 757 RSPAKRAEAASM--LAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSV----PPAS 810 Query: 49 PTSAAPCSTAPGP----IDCPRAEECRRK 73 P A P + PGP D P E R+K Sbjct: 811 PARAPPATETPGPEKAATDLPAPETPRKK 839 >gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] Length = 887 Score = 33.5 bits (75), Expect = 0.038 Identities = 21/63 (33%), Positives = 28/63 (44%) Query: 3 RSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPGPI 62 + P SA +I+ A AA+ A P A A + AA A+P AA + AP P Sbjct: 490 KRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPA 549 Query: 63 DCP 65 P Sbjct: 550 AAP 552 Score = 28.1 bits (61), Expect = 1.6 Identities = 17/53 (32%), Positives = 25/53 (47%) Query: 6 SSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTA 58 ++A + + A AA A PA+ A A+ + AAPA +AAP A Sbjct: 504 AAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAA 556 >gi|7705353 three prime repair exonuclease 1 isoform a [Homo sapiens] Length = 369 Score = 33.1 bits (74), Expect = 0.050 Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 2 CRSPSSAGGSISRRALAASPRGRARDL-------------QPAMPEPAPDAVGSCAAPAS 48 C SP SA G+ A P G + L QP + E AV CA + Sbjct: 43 CSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESP 102 Query: 49 PTSAAPCSTAPGP 61 PTS P T P P Sbjct: 103 PTSQGPPPTVPPP 115 >gi|226371735 iroquois homeobox 3 [Homo sapiens] Length = 501 Score = 33.1 bits (74), Expect = 0.050 Identities = 14/29 (48%), Positives = 17/29 (58%) Query: 33 PEPAPDAVGSCAAPASPTSAAPCSTAPGP 61 P P P AV S + P+ P S PC+ AP P Sbjct: 312 PAPPPVAVASPSLPSPPVSLDPCAPAPAP 340 >gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] Length = 295 Score = 32.3 bits (72), Expect = 0.085 Identities = 17/38 (44%), Positives = 19/38 (50%) Query: 2 CRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDA 39 CR +GG+ SRRA A PR R P P AP A Sbjct: 213 CRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAA 250 >gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo sapiens] Length = 224 Score = 32.3 bits (72), Expect = 0.085 Identities = 17/38 (44%), Positives = 19/38 (50%) Query: 2 CRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDA 39 CR +GG+ SRRA A PR R P P AP A Sbjct: 142 CRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAA 179 >gi|31711992 dihydrolipoamide S-acetyltransferase [Homo sapiens] Length = 647 Score = 32.0 bits (71), Expect = 0.11 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%) Query: 27 DLQPAMPEPAPD---AVGSCAAPASPTSAAPCSTAP-GP 61 DL+P +P P P AV P +PT +APC P GP Sbjct: 313 DLKPQVPPPTPPPVAAVPPTPQPLAPTPSAPCPATPAGP 351 >gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens] Length = 257 Score = 32.0 bits (71), Expect = 0.11 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 6 SSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAP 59 S G SR LAA R +A +P P+ + SC +P+ T+ +P TAP Sbjct: 135 SGEGHPTSRAGLAAISRAQAVASTSTVPSPS-QTMPSCTSPSRATTRSPSWTAP 187 >gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] Length = 559 Score = 31.6 bits (70), Expect = 0.14 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 5 PSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 PS+ S R ++ ++P P +P P P + APA P AP APG Sbjct: 332 PSALSTSSLRASMTSTP-------PPPVPPPPPPPATALQAPAVPPPPAPLQIAPG 380 >gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] Length = 559 Score = 31.6 bits (70), Expect = 0.14 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 5 PSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 PS+ S R ++ ++P P +P P P + APA P AP APG Sbjct: 332 PSALSTSSLRASMTSTP-------PPPVPPPPPPPATALQAPAVPPPPAPLQIAPG 380 >gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] Length = 559 Score = 31.6 bits (70), Expect = 0.14 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 5 PSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 PS+ S R ++ ++P P +P P P + APA P AP APG Sbjct: 332 PSALSTSSLRASMTSTP-------PPPVPPPPPPPATALQAPAVPPPPAPLQIAPG 380 >gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] Length = 559 Score = 31.6 bits (70), Expect = 0.14 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 5 PSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAPG 60 PS+ S R ++ ++P P +P P P + APA P AP APG Sbjct: 332 PSALSTSSLRASMTSTP-------PPPVPPPPPPPATALQAPAVPPPPAPLQIAPG 380 >gi|9257222 forkhead box O1 [Homo sapiens] Length = 655 Score = 31.6 bits (70), Expect = 0.14 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 8/65 (12%) Query: 3 RSPSSAGGSISRRALAASPRGRARDLQ--------PAMPEPAPDAVGSCAAPASPTSAAP 54 ++P S +++ A AA+ G D Q PA P+P P S P P +A P Sbjct: 85 QAPGSVAAAVAAAAAAAATGGLCGDFQGPEAGCLHPAPPQPPPPGPLSQHPPVPPAAAGP 144 Query: 55 CSTAP 59 + P Sbjct: 145 LAGQP 149 >gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens] Length = 531 Score = 31.6 bits (70), Expect = 0.14 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 2 CRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGS---CAAPASPTSAAPCSTA 58 CRSP+ GG SR + A RG P + +P P+ + + T PC Sbjct: 115 CRSPAR-GGDCSRNSCLAWHRGAPAGETPPVCDPCPERIQNHPRTQLCEVHTDCWPCQPG 173 Query: 59 PGPIDCPR 66 G CPR Sbjct: 174 TGAPTCPR 181 >gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens] Length = 531 Score = 31.6 bits (70), Expect = 0.14 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 2 CRSPSSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGS---CAAPASPTSAAPCSTA 58 CRSP+ GG SR + A RG P + +P P+ + + T PC Sbjct: 115 CRSPAR-GGDCSRNSCLAWHRGAPAGETPPVCDPCPERIQNHPRTQLCEVHTDCWPCQPG 173 Query: 59 PGPIDCPR 66 G CPR Sbjct: 174 TGAPTCPR 181 >gi|30410035 late cornified envelope 5A [Homo sapiens] Length = 118 Score = 31.6 bits (70), Expect = 0.14 Identities = 16/55 (29%), Positives = 23/55 (41%) Query: 33 PEPAPDAVGSCAAPASPTSAAPCSTAPGPIDCPRAEECRRKHHGTGRQLRLRPGS 87 P+ P C+AP P ++ C ++ G C HH + LR RP S Sbjct: 30 PKCPPKCPPQCSAPCPPPVSSCCGSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQS 84 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.128 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,107,699 Number of Sequences: 37866 Number of extensions: 298079 Number of successful extensions: 3624 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 361 Number of HSP's that attempted gapping in prelim test: 2882 Number of HSP's gapped (non-prelim): 1038 length of query: 91 length of database: 18,247,518 effective HSP length: 62 effective length of query: 29 effective length of database: 15,899,826 effective search space: 461094954 effective search space used: 461094954 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.