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Search of human proteins with 239748510
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748510 PREDICTED: hypothetical protein XP_002346712 [Homo
sapiens]
(336 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748510 PREDICTED: hypothetical protein XP_002346712 [Homo ... 687 0.0
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 672 0.0
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 660 0.0
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 2e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 46 5e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 7e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 45 9e-05
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 45 1e-04
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 45 1e-04
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 43 3e-04
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 43 3e-04
gi|156104862 ankyrin repeat domain 38 [Homo sapiens] 43 3e-04
gi|239747614 PREDICTED: similar to Putative uncharacterized prot... 43 5e-04
gi|33356148 formin-like 1 [Homo sapiens] 43 5e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 43 5e-04
gi|148613878 acrosin precursor [Homo sapiens] 42 6e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 42 8e-04
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 42 8e-04
gi|24497460 Shaw-related voltage-gated potassium channel protein... 42 0.001
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 42 0.001
gi|150170670 piccolo isoform 2 [Homo sapiens] 41 0.001
gi|150378539 piccolo isoform 1 [Homo sapiens] 41 0.001
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 41 0.001
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 41 0.001
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 41 0.001
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 41 0.002
gi|118402590 myosin XV [Homo sapiens] 41 0.002
gi|19924099 synapsin I isoform Ia [Homo sapiens] 41 0.002
gi|19924097 synapsin I isoform Ib [Homo sapiens] 41 0.002
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi... 40 0.003
>gi|239748510 PREDICTED: hypothetical protein XP_002346712 [Homo
sapiens]
Length = 336
Score = 687 bits (1773), Expect = 0.0
Identities = 336/336 (100%), Positives = 336/336 (100%)
Query: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP
Sbjct: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
Query: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR
Sbjct: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
Query: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRD 180
PPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRD
Sbjct: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRD 180
Query: 181 GRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQRQRLARVCV 240
GRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQRQRLARVCV
Sbjct: 181 GRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQRQRLARVCV 240
Query: 241 RSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQ 300
RSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQ
Sbjct: 241 RSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQ 300
Query: 301 PAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD 336
PAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD
Sbjct: 301 PAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD 336
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 672 bits (1733), Expect = 0.0
Identities = 335/359 (93%), Positives = 335/359 (93%), Gaps = 23/359 (6%)
Query: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP
Sbjct: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
Query: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR
Sbjct: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
Query: 121 PPPQAVQPRPSEPTPGSEALPPGSLPE-----------------------VRGPHPRRAV 157
PPPQAVQPRPSEPTPGSEALPPGSLPE VRGPHPRRAV
Sbjct: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAV 180
Query: 158 VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQ 217
VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSR
Sbjct: 181 VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRP 240
Query: 218 PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL 277
PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL
Sbjct: 241 PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL 300
Query: 278 GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD 336
GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD
Sbjct: 301 GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD 359
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 660 bits (1703), Expect = 0.0
Identities = 335/389 (86%), Positives = 335/389 (86%), Gaps = 53/389 (13%)
Query: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP
Sbjct: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
Query: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR
Sbjct: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
Query: 121 PPPQAVQPRPSEPTPGSEALPPGSLPE--------------------------------- 147
PPPQAVQPRPSEPTPGSEALPPGSLPE
Sbjct: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPPRESPAPRPFRWGDPFSPAPPRPQ 180
Query: 148 --------------------VRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLA 187
VRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLA
Sbjct: 181 PPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLA 240
Query: 188 PQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQRQRLARVCVRSLPGNR 247
PQRGRGGLLLVVLHAATVQRPRLGRGPSR PRGPVGVCRPQVAQRQRLARVCVRSLPGNR
Sbjct: 241 PQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNR 300
Query: 248 RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHA 307
RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHA
Sbjct: 301 RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHA 360
Query: 308 AAPASLTDHSFARPLVTEHLAHGVSGAGD 336
AAPASLTDHSFARPLVTEHLAHGVSGAGD
Sbjct: 361 AAPASLTDHSFARPLVTEHLAHGVSGAGD 389
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 47.0 bits (110), Expect = 2e-05
Identities = 81/315 (25%), Positives = 109/315 (34%), Gaps = 61/315 (19%)
Query: 27 DPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLA 86
D AL L PLA PSG + P P NA + T PP LA
Sbjct: 291 DAAPALGPLSSSPLATPS----PSGTKARPVPPPDNAATPLPAT--------LPPSPPLA 338
Query: 87 SYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPP-GSL 145
+ LP++P P+APPS P+ P Q PS TP +A P ++
Sbjct: 339 T------------PLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTI 386
Query: 146 PEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATV 205
P ++ PH + +QAP +A L+ G L H+
Sbjct: 387 PPIQVPHSLTSP------SLQAPPSPLALSSLQ---------ATTSLGSPTLQATHSFLT 431
Query: 206 QRPRLGRGPSRQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGAT 265
PR + P P + L SLP + L T PA PL T
Sbjct: 432 MSPRQTQASLTSPSRPASTPPDSPPLQAPL------SLPASPPLQTSLSPAVSPLSSPLT 485
Query: 266 LP-----SSLP--APRLHLGSLL------PSSSGGARLGDAAGTTHFQPAHLSHAAAPAS 312
+ SSL +P+ L SL+ SS L + P + AP
Sbjct: 486 IHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPP 545
Query: 313 LTDHSFARPLVTEHL 327
L + + PL T HL
Sbjct: 546 L--QTASAPLTTPHL 558
Score = 45.4 bits (106), Expect = 7e-05
Identities = 55/198 (27%), Positives = 77/198 (38%), Gaps = 22/198 (11%)
Query: 104 SPADPAA-PPSSPHAPTRPPPQAVQPRP-SEPTPGSEALPPGSLPEVRGPHPRRAVVVAV 161
S +PA+ PP+S PP + P P S P S PG L + +G VA
Sbjct: 86 SSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ-KGLRISAEETVAR 144
Query: 162 LFGVQAPRRDVAEGGLRRD--GRRPG-----LAPQRGRGGLLLVVLHAATVQRPRLGRGP 214
+AP+R G RRD G PG +A + G + + A RP R P
Sbjct: 145 GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP---RPP 201
Query: 215 SRQPRGPV------GVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPS 268
+ PR V P A R+R + P +R L++ + P + P + G PS
Sbjct: 202 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG---PS 258
Query: 269 SLPAPRLHLGSLLPSSSG 286
+ PR P G
Sbjct: 259 ARGTPRAPAHPSQPKPKG 276
Score = 40.0 bits (92), Expect = 0.003
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 101 LPVSPADPAAPPSSPHA---PTRPPPQAVQPRPSEPT-PGSEALPPGSLPEVRGP 151
L V P+ PA+PP SP A P PPP A P P+ P S + P + P R P
Sbjct: 704 LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVP 758
Score = 37.4 bits (85), Expect = 0.019
Identities = 29/89 (32%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 78 SSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRP--------PPQAVQPR 129
+SPP A+ + P L V P+ PA+PP SP A P PP V P
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 130 PSEPTPGSE-ALPPGSLPEVRGPHPRRAV 157
P P S A PP P P +A+
Sbjct: 772 PPASLPMSPLAKPPPQAPPALATPPLQAL 800
Score = 36.2 bits (82), Expect = 0.043
Identities = 73/298 (24%), Positives = 95/298 (31%), Gaps = 63/298 (21%)
Query: 99 LTLPVSPADPAAPPSSPHAP-TRPPPQA--------VQPRPSEPT--PGSEAL-PPGSLP 146
L P P+ P S P +P +PPPQA +Q PS P PG P SLP
Sbjct: 761 LAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 820
Query: 147 --EVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHA-- 202
+ P P+ V+A +Q P A L+ R P P G L + A
Sbjct: 821 MSPLATPPPQAPPVLAAPL-LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 879
Query: 203 ----------ATVQRPRL-----------------------GRGPSRQPRGPVGVCRPQV 229
+T+ P L G S P + C P
Sbjct: 880 PPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAA 939
Query: 230 AQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATL------PSSLPAPRLHLGSLLPS 283
R + R PG L G T+ S+ PAP P
Sbjct: 940 WSRGPAPPLAFRGAPG-APLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPG 998
Query: 284 SSGG-ARLGDAAGTTHFQP-----AHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAG 335
+SGG A G AG + P L A AS+ H +R L+ G+G
Sbjct: 999 TSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSG 1056
Score = 33.5 bits (75), Expect = 0.28
Identities = 79/301 (26%), Positives = 104/301 (34%), Gaps = 41/301 (13%)
Query: 39 PLAAGGRCRVPS-GLRRLADPIPGNARAGV-ARTEQRDHSQSSPPCRRLASYSFWSSAPW 96
P A GG R S L A P+ AR+G AR R + S P + + P
Sbjct: 228 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPK----GLQALRP- 282
Query: 97 RELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRA 156
++T P A PA P S P P + RP P P + A P LP P P A
Sbjct: 283 PQVTPPRKDAAPALGPLSSSPLATPSPSGTKARP-VPPPDNAATP---LPATLPPSPPLA 338
Query: 157 VVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHA-------ATVQRPR 209
+ + AP A L+ P P + + + A +Q P
Sbjct: 339 TPLPL-----APPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPH 393
Query: 210 LGRGPSRQ-PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATL-- 266
PS Q P P+ + Q SL AT S P Q A+L
Sbjct: 394 SLTSPSLQAPPSPLALSSLQ----------ATTSLGSPTLQATHSFLTMSPRQTQASLTS 443
Query: 267 ---PSSLP--APRLHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARP 321
P+S P +P L LP+S A + P + A +SL HS P
Sbjct: 444 PSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAP 503
Query: 322 L 322
L
Sbjct: 504 L 504
Score = 33.5 bits (75), Expect = 0.28
Identities = 49/175 (28%), Positives = 62/175 (35%), Gaps = 14/175 (8%)
Query: 99 LTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVV 158
L P SP PP +P + PPPQA P+ +P + LP L + P P+
Sbjct: 569 LQAPPSPLT-TPPPETPSSIATPPPQA---PPALASPPLQGLPSPPLSPLATPPPQAPPX 624
Query: 159 VAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQP 218
+A L +QAP A L P P L V L A P P + P
Sbjct: 625 LA-LPPLQAPPSPPASPPL-----SPLATPSPQAPNALAVHLLQAPFSPP--PSPPVQAP 676
Query: 219 RGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAP 273
P P V+ SL S PA+ P+ AT P P P
Sbjct: 677 FSP--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 729
Score = 32.3 bits (72), Expect = 0.61
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 78 SSPPCRRLASYSFWSSAP----WRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEP 133
+SPP LA+ S AP L P SP P+ P +P +P PP + P
Sbjct: 638 ASPPLSPLATPS--PQAPNALAVHLLQAPFSPP-PSPPVQAPFSPPASPPVSPSATPPSQ 694
Query: 134 TPGSEALPPGSLP 146
P S A PP +P
Sbjct: 695 APPSLAAPPLQVP 707
Score = 31.2 bits (69), Expect = 1.4
Identities = 54/216 (25%), Positives = 75/216 (34%), Gaps = 38/216 (17%)
Query: 76 SQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTP 135
S ++PP L S + P + + P++ PP P + PP + P E TP
Sbjct: 529 SLTTPPLENLPSLA---PPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPE-TP 584
Query: 136 GSEALPPGSLP-EVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGG 194
S A PP P + P P + + L + P P +
Sbjct: 585 SSIATPPPQAPPALASP-PLQGLPSPPLSPLATP-------------------PPQAPPX 624
Query: 195 LLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQV--AQRQRLARVCVRSLPGNRRLATR 252
L L L A P+ P P+ PQ A L + P A
Sbjct: 625 LALPPLQAPP-------SPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 677
Query: 253 SCPAAFPLQGGATLPS----SLPAPRLHLGSLLPSS 284
S PA+ P+ AT PS SL AP L + P+S
Sbjct: 678 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS 713
Score = 31.2 bits (69), Expect = 1.4
Identities = 52/196 (26%), Positives = 67/196 (34%), Gaps = 38/196 (19%)
Query: 101 LPVSPADPAA--PPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVV 158
LP P P A PP +P PP QA P P P S L P + P + P+ +
Sbjct: 606 LPSPPLSPLATPPPQAPPXLALPPLQAP-PSP----PASPPLSPLATPSPQAPNALAVHL 660
Query: 159 VAVLFG------VQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGR 212
+ F VQAP A + P AP L A +Q P
Sbjct: 661 LQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS---------LAAPPLQVP--PS 709
Query: 213 GPSRQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLP- 271
P+ P P PQ + V P PA+ P+ AT P +P
Sbjct: 710 PPASPPMSPSATPPPQAPPPLAAPPLQVPPSP----------PASPPMSPSATPPPRVPP 759
Query: 272 ---APRLHLGSLLPSS 284
AP L + P+S
Sbjct: 760 LLAAPPLQVPPSPPAS 775
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 45.8 bits (107), Expect = 5e-05
Identities = 53/196 (27%), Positives = 74/196 (37%), Gaps = 21/196 (10%)
Query: 105 PADPAAPPSSPHAPTRPPPQAVQPRP-SEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLF 163
P + PP+S PP + P P S P S PG L + +G VA
Sbjct: 79 PTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ-KGLRISAEETVARGK 137
Query: 164 GVQAPRRDVAEGGLRRD--GRRPG-----LAPQRGRGGLLLVVLHAATVQRPRLGRGPSR 216
+AP+R G RRD G PG +A + G + + A RP R P+
Sbjct: 138 ATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP---RPPTE 194
Query: 217 QPRGPV------GVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSL 270
PR V P A R+R + P +R L++ + P + P + G PS+
Sbjct: 195 GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG---PSAR 251
Query: 271 PAPRLHLGSLLPSSSG 286
PR P G
Sbjct: 252 GTPRAPAHPSQPKPKG 267
Score = 35.0 bits (79), Expect = 0.095
Identities = 98/399 (24%), Positives = 123/399 (30%), Gaps = 95/399 (23%)
Query: 28 PQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQS-SPPCRRLA 86
P A L PL A L LA P P A Q S SPP + A
Sbjct: 354 PPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ--A 411
Query: 87 SYSFWSSAPWRELTLPVSPADP--AAPP---------SSPHAPT-RPPPQAVQPRPSEP- 133
+S +S P P S A P AAPP S P +P+ PPPQA P + P
Sbjct: 412 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 471
Query: 134 --------------TPGSEALP------PGSLP----------EVRGPHPRRAVVVAVLF 163
TP +ALP PG P + P P+ V+A
Sbjct: 472 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 531
Query: 164 GVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHA------------ATVQRPRL- 210
+Q P A L+ R P P G L + A +T+ P L
Sbjct: 532 -LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLA 590
Query: 211 ----------------------GRGPSRQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRR 248
G S P + C P R + R PG
Sbjct: 591 GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG-AP 649
Query: 249 LATRSCPAAFPLQGGATL------PSSLPAPRLHLGSLLPSSSGG-ARLGDAAGTTHFQP 301
L G T+ S+ PAP P +SGG A G AG + P
Sbjct: 650 LPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP 709
Query: 302 -----AHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAG 335
L A AS+ H +R L+ G+G
Sbjct: 710 KQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSG 748
Score = 33.5 bits (75), Expect = 0.28
Identities = 66/257 (25%), Positives = 86/257 (33%), Gaps = 32/257 (12%)
Query: 39 PLAAGGRCRVPS-GLRRLADPIPGNARAGVAR--TEQRDHSQSSPPCRRLASYSFWSSAP 95
P A GG R S L A P+ AR+G + T + S P + L + P
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP 278
Query: 96 WRELTLPV------------SPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEA---- 139
R+ P SP+ P +P + P T P P A P + + GS
Sbjct: 279 PRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQAT 338
Query: 140 ---LPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLL 196
LP L + P P+ +A L +QAP A L P P L
Sbjct: 339 HSFLPSPPLSPLATPPPQAPPALA-LPPLQAPPSPPASPPL-----SPLATPSPQAPNAL 392
Query: 197 LVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPA 256
V L A P P + P P P V+ SL S PA
Sbjct: 393 AVHLLQAPFSPP--PSPPVQAPFSP--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA 448
Query: 257 AFPLQGGATLPSSLPAP 273
+ P+ AT P P P
Sbjct: 449 SPPMSPSATPPPQAPPP 465
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.4 bits (106), Expect = 7e-05
Identities = 55/198 (27%), Positives = 77/198 (38%), Gaps = 22/198 (11%)
Query: 104 SPADPAA-PPSSPHAPTRPPPQAVQPRP-SEPTPGSEALPPGSLPEVRGPHPRRAVVVAV 161
S +PA+ PP+S PP + P P S P S PG L + +G VA
Sbjct: 86 SSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ-KGLRISAEETVAR 144
Query: 162 LFGVQAPRRDVAEGGLRRD--GRRPG-----LAPQRGRGGLLLVVLHAATVQRPRLGRGP 214
+AP+R G RRD G PG +A + G + + A RP R P
Sbjct: 145 GKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARP---RPP 201
Query: 215 SRQPRGPV------GVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPS 268
+ PR V P A R+R + P +R L++ + P + P + G PS
Sbjct: 202 TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG---PS 258
Query: 269 SLPAPRLHLGSLLPSSSG 286
+ PR P G
Sbjct: 259 ARGTPRAPAHPSQPKPKG 276
Score = 35.8 bits (81), Expect = 0.056
Identities = 50/177 (28%), Positives = 63/177 (35%), Gaps = 14/177 (7%)
Query: 101 LPVSPADPAAPPS---SPHAPTRPPPQAVQPRPSEPTPGSEA-LPPGSLPEVRGPHPRRA 156
LP++P P+APPS P P PP QA S + + LP L + P P+
Sbjct: 338 LPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAP 397
Query: 157 VVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSR 216
+A L +QAP A L P P L V L A P P +
Sbjct: 398 PALA-LPPLQAPPSPPASPPL-----SPLATPSPQAPNALAVHLLQAPFSPP--PSPPVQ 449
Query: 217 QPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAP 273
P P P V+ SL S PA+ P+ AT P P P
Sbjct: 450 APFSP--PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 504
Score = 35.4 bits (80), Expect = 0.073
Identities = 68/253 (26%), Positives = 89/253 (35%), Gaps = 42/253 (16%)
Query: 30 LALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYS 89
L L LPLA PS L+ L P Q S SP + A++S
Sbjct: 330 LTCQLATPLPLAPPSPSAPPS-LQTLPSP-------PATPPSQATTSLGSPTLQ--ATHS 379
Query: 90 FWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVR 149
F S P L P PP +P A PP QA P P P S L P + P +
Sbjct: 380 FLPSPPLSPLATP--------PPQAPPALALPPLQA----PPSP-PASPPLSPLATPSPQ 426
Query: 150 GPHPRRAVVVAVLFG------VQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLH-- 201
P+ ++ F VQAP A + P AP L V
Sbjct: 427 APNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 486
Query: 202 AATVQRPRLGRGPSRQP---RGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAF 258
A+ P P P P+ + +P LA +++LP S PA+F
Sbjct: 487 ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP--------SPPASF 538
Query: 259 PLQGGATLPSSLP 271
P Q + +SLP
Sbjct: 539 PGQAPFSPSASLP 551
Score = 35.0 bits (79), Expect = 0.095
Identities = 98/399 (24%), Positives = 123/399 (30%), Gaps = 95/399 (23%)
Query: 28 PQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQS-SPPCRRLA 86
P A L PL A L LA P P A Q S SPP + A
Sbjct: 393 PPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ--A 450
Query: 87 SYSFWSSAPWRELTLPVSPADP--AAPP---------SSPHAPT-RPPPQAVQPRPSEP- 133
+S +S P P S A P AAPP S P +P+ PPPQA P + P
Sbjct: 451 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 510
Query: 134 --------------TPGSEALP------PGSLP----------EVRGPHPRRAVVVAVLF 163
TP +ALP PG P + P P+ V+A
Sbjct: 511 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL 570
Query: 164 GVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHA------------ATVQRPRL- 210
+Q P A L+ R P P G L + A +T+ P L
Sbjct: 571 -LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLA 629
Query: 211 ----------------------GRGPSRQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRR 248
G S P + C P R + R PG
Sbjct: 630 GHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPG-AP 688
Query: 249 LATRSCPAAFPLQGGATL------PSSLPAPRLHLGSLLPSSSGG-ARLGDAAGTTHFQP 301
L G T+ S+ PAP P +SGG A G AG + P
Sbjct: 689 LPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSP 748
Query: 302 -----AHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAG 335
L A AS+ H +R L+ G+G
Sbjct: 749 KQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSG 787
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 45.1 bits (105), Expect = 9e-05
Identities = 37/101 (36%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 92 SSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRP---SEPTPGSEALPPGSLPEV 148
SSAP P +P APP S PT PP AV P PTP S +P + P+
Sbjct: 129 SSAP------PATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPT-TPPQA 181
Query: 149 RGPHPRRAVVVAVLFG-VQAPRRDVAEGGLRRDGRRPGLAP 188
GP P A V G Q P +GG G +PG P
Sbjct: 182 GGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGP 222
Score = 36.2 bits (82), Expect = 0.043
Identities = 58/226 (25%), Positives = 71/226 (31%), Gaps = 29/226 (12%)
Query: 88 YSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPP---QAVQPRPSEPTPGSEALPPGS 144
+ F S P L P P S P P PPP Q QP P +P P + PP
Sbjct: 29 HDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPP--QQPPPHQ 86
Query: 145 LPEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAAT 204
P PH + Q P + + PG AP G G A
Sbjct: 87 PPPHPQPHQQ-----------QQPPPPPQDSSKPVVAQGPGPAP--GVGSAPPASSSAPP 133
Query: 205 VQRPRLGRGPSRQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGA 264
P G P P GP P V A P + + T A P A
Sbjct: 134 ATPPTSGAPPGSGP-GPTPTPPPAVTSAPPGA---PPPTPPSSGVPTTPPQAGGPPPPPA 189
Query: 265 TLPSSLPAPRLHLGSLLPSSS---GGARLGDAAGTT----HFQPAH 303
+P P P+ G P GG + G G + H +P H
Sbjct: 190 AVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPH 235
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
3 [Homo sapiens]
Length = 998
Score = 44.7 bits (104), Expect = 1e-04
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 21 EKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPG----NARAGVARTEQRDHS 76
EK+G++ P NLL S +A+ P NAR R
Sbjct: 416 EKQGLEQPGFEENLL------------EESQYGEVAEETPASNNQNARMLEGRQTPASTL 463
Query: 77 QSSPPCRRLASYSFWSSAPWRELTLPVSPADPAA--PPSSPHAPTRPPPQAVQ---PRPS 131
+ RL S + P L P S + A P + H P + P + Q P PS
Sbjct: 464 EQDATDYRLRSLRKLLAQPREGLLAPFSKRNSTASFPGRTSHIPVQQPEKRKQKPSPEPS 523
Query: 132 EPTPGSEALPPG----SLPEVRGPHPRRA 156
+ +P S+ PPG +LP++RGP PR A
Sbjct: 524 QDSPHSDKWPPGHPVKNLPQMRGPRPRPA 552
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 44.7 bits (104), Expect = 1e-04
Identities = 54/208 (25%), Positives = 74/208 (35%), Gaps = 12/208 (5%)
Query: 79 SPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSE 138
+PP R ++ SF S+ P L A+PP P + PP + P+ P
Sbjct: 142 APPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPPAGLSTEPAGPGTAPR 201
Query: 139 ALPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLV 198
PG EV G P A A A G LR++ + R L
Sbjct: 202 PFLPGQPAEVDGNPPPAAPEAPAASPSTASPAPAAPGDLRQEH-----FDRLIRRSKLWC 256
Query: 199 VLHAATVQRPRLGRGPSRQP-RGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAA 257
+ P L RGP R P +GP A+++RL R+ R T +
Sbjct: 257 YAKGFALDTPSLRRGPERPPAKGPA----RGAAKKRRLPAPPPRTAQPRRPAPTLPTTST 312
Query: 258 FPLQGGATLPSSLPAPRLHLGSLLPSSS 285
F L P +L G L P+SS
Sbjct: 313 FSLLNCFPCPPALVVG--EDGDLKPASS 338
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 43.1 bits (100), Expect = 3e-04
Identities = 89/354 (25%), Positives = 122/354 (34%), Gaps = 42/354 (11%)
Query: 2 TPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPG 61
+PLP L+ ++P TF + LA NL AG P P
Sbjct: 272 SPLPTPLDPEEP-TFPALSSSSSTGN--LAANLTHLGIGGAGQGMSTPGSS-------PQ 321
Query: 62 NARAGVA----RTEQRDHSQSSPPCRRLA--SYSFWSSAPWRELTLPVS---PADPAAPP 112
+ AGV+ TE R Q+SP L+ + + A E LP + A PP
Sbjct: 322 HRPAGVSPLSLSTEAR-RQQASPTLSPLSPITQAVAMDALSLEQQLPYAFFTQAGSQQPP 380
Query: 113 SSPHAPTRPPPQAVQPRPSEPTPGSEALPPGS--LPE---VRGPHPRRAVVVAVLFGVQA 167
P P PPP + QP P P LPPG LP RGP P V Q+
Sbjct: 381 PQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVTVPSSLPQS 440
Query: 168 PRRDVAEGGLRRD-GRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCR 226
P + + + D P L R G + V G S Q +G
Sbjct: 441 PPENPGQPSMGIDIASAPALQQYRTSAGSPANQSPTSPVSNQGFSPGSSPQHTSTLGSVF 500
Query: 227 PQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSG 286
Q++A +L F + A SSL +P GS L S
Sbjct: 501 GDAYYEQQMAARQANALSHQLE--------QFNMMENAISSSSLYSP----GSTLNYSQA 548
Query: 287 ---GARLGDAAGTTHFQPAHLSHAAAP-ASLTDHSFARPLVTEHLAHGVSGAGD 336
G + Q + SH+ P LT + P +++ L ++G GD
Sbjct: 549 AMMGLTGSHGSLPDSQQLGYASHSGIPNIILTVTGESPPSLSKELTSSLAGVGD 602
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 43.1 bits (100), Expect = 3e-04
Identities = 89/354 (25%), Positives = 122/354 (34%), Gaps = 42/354 (11%)
Query: 2 TPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPG 61
+PLP L+ ++P TF + LA NL AG P P
Sbjct: 256 SPLPTPLDPEEP-TFPALSSSSSTGN--LAANLTHLGIGGAGQGMSTPGSS-------PQ 305
Query: 62 NARAGVA----RTEQRDHSQSSPPCRRLA--SYSFWSSAPWRELTLPVS---PADPAAPP 112
+ AGV+ TE R Q+SP L+ + + A E LP + A PP
Sbjct: 306 HRPAGVSPLSLSTEAR-RQQASPTLSPLSPITQAVAMDALSLEQQLPYAFFTQAGSQQPP 364
Query: 113 SSPHAPTRPPPQAVQPRPSEPTPGSEALPPGS--LPE---VRGPHPRRAVVVAVLFGVQA 167
P P PPP + QP P P LPPG LP RGP P V Q+
Sbjct: 365 PQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVTVPSSLPQS 424
Query: 168 PRRDVAEGGLRRD-GRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCR 226
P + + + D P L R G + V G S Q +G
Sbjct: 425 PPENPGQPSMGIDIASAPALQQYRTSAGSPANQSPTSPVSNQGFSPGSSPQHTSTLGSVF 484
Query: 227 PQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSG 286
Q++A +L F + A SSL +P GS L S
Sbjct: 485 GDAYYEQQMAARQANALSHQLE--------QFNMMENAISSSSLYSP----GSTLNYSQA 532
Query: 287 ---GARLGDAAGTTHFQPAHLSHAAAP-ASLTDHSFARPLVTEHLAHGVSGAGD 336
G + Q + SH+ P LT + P +++ L ++G GD
Sbjct: 533 AMMGLTGSHGSLPDSQQLGYASHSGIPNIILTVTGESPPSLSKELTSSLAGVGD 586
>gi|156104862 ankyrin repeat domain 38 [Homo sapiens]
Length = 995
Score = 43.1 bits (100), Expect = 3e-04
Identities = 50/199 (25%), Positives = 77/199 (38%), Gaps = 12/199 (6%)
Query: 81 PCRRLASYSFWSSAPWRELTLPVSPA-DPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEA 139
P R A + +S+ P R +LP S A PAAPP +P P ++ + +P
Sbjct: 56 PIHRRAKQAKFSTLP-RNFSLPDSGARPPAAPPLQNWSPVVPREASLGTQEQNQSPPLGN 114
Query: 140 LPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVV 199
P S + R+A++ ++A + AE L RP L + +
Sbjct: 115 APQASTSRSEVSYHRKALLAEATRQLEAAEPEDAE--LTFGSGRPQLL---RASSMPATL 169
Query: 200 LHAATVQRPRLGRGPSRQP-----RGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSC 254
LH+ + P L GP P +G VC + LA S + R+
Sbjct: 170 LHSRASEEPGLSLGPPAPPALPPLQGEGSVCDGTFEPAEGLAGFHSSSPRASTRIPELVQ 229
Query: 255 PAAFPLQGGATLPSSLPAP 273
A P +G +P+ LP P
Sbjct: 230 EGAEPPEGVVKVPNHLPLP 248
>gi|239747614 PREDICTED: similar to Putative uncharacterized protein
FLJ44672 [Homo sapiens]
Length = 259
Score = 42.7 bits (99), Expect = 5e-04
Identities = 72/233 (30%), Positives = 86/233 (36%), Gaps = 41/233 (17%)
Query: 100 TLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVV 159
+LP S PA PP P P S P AL LPE + P PR + V
Sbjct: 32 SLPASSPGPALPPGCVSRPDSGLPTT--SLDSAPAQLPVALVGPQLPEAKFPRPRSGLTV 89
Query: 160 AVLFGVQAPRRDV-AEGGLRRDG-RRPGLAPQRGRGGLLLVVLHAATVQRPRLG--RGPS 215
A A R + A GLR G RP L GLL +A RP +G R
Sbjct: 90 ASPGSAPALRWHLQAPNGLRSVGSSRPSL-------GLLAA---SAGPNRPEVGLSRPSL 139
Query: 216 RQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPS-SLPAPR 274
P G PQ+ L V LPG + + + P GA LP SL P
Sbjct: 140 GLPAASAGPSHPQIGLELGLEEQQV-GLPGPNSVLSAASP-------GAKLPRVSLSRPS 191
Query: 275 LHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHL 327
S LP +S A QP+ AA P D F RPL ++L
Sbjct: 192 ---SSCLPVASFXA-----------QPSSWLSAAFPGPAFD--FWRPLQAQNL 228
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 42.7 bits (99), Expect = 5e-04
Identities = 36/111 (32%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 48 VPSG-----LRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLP 102
VP+G L A+P PG A Q +PP SAP + LP
Sbjct: 521 VPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPP-----------SAPPQAPPLP 569
Query: 103 VSPADPAAPP---SSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRG 150
SP P APP P P PPP P P P PPG P+ G
Sbjct: 570 GSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDALG 620
Score = 30.4 bits (67), Expect = 2.3
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 18/68 (26%)
Query: 104 SPADPAAPPSSP---HAPTRPPPQAVQPRPSE----------PTPGSEALP-----PGSL 145
SP+ AP + P AP PPP P P E P PGS P PG L
Sbjct: 525 SPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDL 584
Query: 146 PEVRGPHP 153
P P P
Sbjct: 585 PPPPPPPP 592
Score = 29.6 bits (65), Expect = 4.0
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 104 SPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPG---SEALPPGSLPE 147
+P P PS AP P P P P PG + PP + P+
Sbjct: 518 TPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQ 564
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 42.7 bits (99), Expect = 5e-04
Identities = 63/221 (28%), Positives = 75/221 (33%), Gaps = 55/221 (24%)
Query: 39 PLAAGGRCRVP--SGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPW 96
P+AA R P + A P PG A+ G P +R A
Sbjct: 139 PVAAAAPARAPRAAAAAATAPPSPGPAQPG-------------PRAQRAA---------- 175
Query: 97 RELTLPVSPADPAAPP--SSPHAPTRPPPQAV-------QPRPSEPTPGSEALPPGSLPE 147
L P PAAPP + P P R PP AV P P P P + PP P+
Sbjct: 176 ---PLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQ 232
Query: 148 VRGPHPRRAVVVAVLFGVQAPRRDVAE--------GGLRRDGRRPGLAPQR--GRGGLLL 197
P P V A R+V GG GR GL + RG L
Sbjct: 233 ---PPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLER 289
Query: 198 VVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQRQRLARV 238
L A + R G P R P P RP ++R RV
Sbjct: 290 TRLGALALPR---GDRPGRAP--PAASARPSRSKRGGEERV 325
Score = 38.9 bits (89), Expect = 0.007
Identities = 41/142 (28%), Positives = 51/142 (35%), Gaps = 14/142 (9%)
Query: 47 RVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPA 106
R+ +RR P P RA + + Q+ R + S+ S +R P
Sbjct: 53 RICRMVRRRHGPEPERTRAELEKLIQQ---------RAVLRVSYKGSISYRNAARVQPPR 103
Query: 107 DPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLFGVQ 166
A PP+ P AP P A P PTP A PP P V P RA A
Sbjct: 104 RGATPPAPPRAPRGAPAAAAAAAP-PPTP---APPPPPAP-VAAAAPARAPRAAAAAATA 158
Query: 167 APRRDVAEGGLRRDGRRPGLAP 188
P A+ G R P AP
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAP 180
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 42.4 bits (98), Expect = 6e-04
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Query: 52 LRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPW--RELTLPVSPADPA 109
L +A I NA + + PP R S+ + PW + P+ P PA
Sbjct: 282 LNWIASKIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPA 341
Query: 110 APPSSPHAPTRPPPQAVQPRPSEPTP 135
A P P +P PPP P P P P
Sbjct: 342 AQPRPPPSPPPPPPPPASPLPPPPPP 367
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 42.0 bits (97), Expect = 8e-04
Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 16/112 (14%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSL---PEVRGPHPRRAVV 158
P SP + PS PH P PP PRP P + LP GS+ + + P RR
Sbjct: 121 PSSPPPRPSLPSGPHRPVLPPSALAAPRP----PLARPLPQGSVTAREQEQRPRSRRRAG 176
Query: 159 VAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRL 210
G R EG +D G GLLL++L AA V+ P L
Sbjct: 177 APEALGPALTRIHNVEGS--KDSWNCG-------QGLLLLMLSAAPVRTPGL 219
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 42.0 bits (97), Expect = 8e-04
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 52 LRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPW--RELTLPVSPADPA 109
L +A I NA + + PP R S+ + PW + P+ P PA
Sbjct: 216 LNWIASKIGSNALRMIQSATPPPPTTRPPPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPA 275
Query: 110 A---PPSSPHAPTRPPPQAVQPRPSEPTP---GSEALPPG 143
A PP SP P PPP + P P P P + LP G
Sbjct: 276 AQPRPPPSPPPPPPPPPSPLPPPPPPPPPTPSSTTKLPQG 315
>gi|24497460 Shaw-related voltage-gated potassium channel protein 3
[Homo sapiens]
Length = 757
Score = 41.6 bits (96), Expect = 0.001
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 104 SPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRA 156
S PA PP P +P PP Q +P++P P A P P RGP RRA
Sbjct: 17 SKQQPAPPPQPPESPPPPPLPPQQQQPAQPGP---AASPAGPPAPRGPGDRRA 66
Score = 28.5 bits (62), Expect = 8.9
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 19/58 (32%)
Query: 105 PADPAAPPSSPHAPTRPPPQA--VQPRPS-----------------EPTPGSEALPPG 143
PA P PP SP P PP Q QP P+ EP PG A G
Sbjct: 21 PAPPPQPPESPPPPPLPPQQQQPAQPGPAASPAGPPAPRGPGDRRAEPCPGLPAAAMG 78
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 41.6 bits (96), Expect = 0.001
Identities = 40/123 (32%), Positives = 44/123 (35%), Gaps = 30/123 (24%)
Query: 105 PADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLFG 164
P P PS P P +PPP P GS PP S P V GPH F
Sbjct: 1281 PYLPPQQPSLPPPPQQPPPL--------PQLGSIPPPPASAPPV-GPHRH--------FH 1323
Query: 165 VQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGV 224
P G RPG AP+RG GG H GR P QP P+ +
Sbjct: 1324 AHGP----VPGPQHYTLGRPGRAPRRGAGGHPQFAPH---------GRHPLHQPTSPLPL 1370
Query: 225 CRP 227
P
Sbjct: 1371 YSP 1373
Score = 33.5 bits (75), Expect = 0.28
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 101 LPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPT-PGSEALPPGSLPEVR 149
+P P+ P PP SPH P P P P + P A PP + P+ +
Sbjct: 1431 IPPHPSYPPLPPPSPHTPHSPLPPTSPHGPLHASGPPGTANPPSANPKAK 1480
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/185 (26%), Positives = 71/185 (38%), Gaps = 22/185 (11%)
Query: 12 KPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNA---RAGVA 68
+PG + ++ G P LA L P A G + P + P PG +AG
Sbjct: 404 QPGPAKPPTQQVGTPKP-LAQQPGLQSPAKAPGPTKTP-----VQQPGPGKIPAQQAGPG 457
Query: 69 RTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQP 128
+T + + PP + P P P A PPS T+PPPQ P
Sbjct: 458 KTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS-AKPPSQQPGSTKPPPQQPGP 516
Query: 129 -RPSEPTPGSEALP---PGSL-PEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRR 183
+PS PGS P PGS P + P P + Q + V++ G + +
Sbjct: 517 AKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKP-------SAQQSTKPVSQTGSGKPLQP 569
Query: 184 PGLAP 188
P ++P
Sbjct: 570 PTVSP 574
Score = 38.5 bits (88), Expect = 0.009
Identities = 57/233 (24%), Positives = 82/233 (35%), Gaps = 23/233 (9%)
Query: 58 PIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPW-RELTLPVSPADPAAPPSSPH 116
P G G +T Q DH++ P +R AS A R ++ S P+ PP
Sbjct: 252 PGTGKPIQGPTQTPQTDHAKL--PLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQP 309
Query: 117 APTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRD---VA 173
P +PP Q S+P P P L + P G P A
Sbjct: 310 TPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPA 369
Query: 174 EGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQRQ 233
+ ++ G + Q G A Q P +G+ P++QP GP QV +
Sbjct: 370 KPPAQQTGSEKPSSEQPG---------PKALAQPPGVGKTPAQQP-GPAKPPTQQVGTPK 419
Query: 234 RLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSG 286
LA+ PG + A P P+Q P +PA + G +G
Sbjct: 420 PLAQ-----QPGLQSPAKAPGPTKTPVQQPG--PGKIPAQQAGPGKTSAQQTG 465
Score = 34.7 bits (78), Expect = 0.12
Identities = 44/175 (25%), Positives = 58/175 (33%), Gaps = 26/175 (14%)
Query: 96 WRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRR 155
+R +L +S P PP P P PPP P P +P LP L V P
Sbjct: 2394 FRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKL-TVASP---- 2448
Query: 156 AVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPS 215
LF A LR +G L V T P + PS
Sbjct: 2449 VTTATPLFDAVTTLETTAV--LRSNG---------------LPVTRICTTAPPPVPPKPS 2491
Query: 216 RQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSL 270
P G V RP+ ++ + + LP T+ P G +L SS+
Sbjct: 2492 SIPSGLVFTHRPEPSKPPIAPKPVIPQLP----TTTQKPTDIHPKPTGLSLTSSM 2542
Score = 28.5 bits (62), Expect = 8.9
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 93 SAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPH 152
S+P + T P A P S P +PPP QP +P ++A P + P
Sbjct: 675 SSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQP-TLHGSPSAKAKQPPEADSLSKPA 733
Query: 153 P 153
P
Sbjct: 734 P 734
Score = 28.5 bits (62), Expect = 8.9
Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 12/68 (17%)
Query: 75 HSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPT 134
HSQS P AP ++ P P PP S P +++ +
Sbjct: 955 HSQSGP------------GAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKA 1002
Query: 135 PGSEALPP 142
P +E L P
Sbjct: 1003 PAAEKLEP 1010
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 41.2 bits (95), Expect = 0.001
Identities = 49/185 (26%), Positives = 71/185 (38%), Gaps = 22/185 (11%)
Query: 12 KPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNA---RAGVA 68
+PG + ++ G P LA L P A G + P + P PG +AG
Sbjct: 404 QPGPAKPPTQQVGTPKP-LAQQPGLQSPAKAPGPTKTP-----VQQPGPGKIPAQQAGPG 457
Query: 69 RTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQP 128
+T + + PP + P P P A PPS T+PPPQ P
Sbjct: 458 KTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS-AKPPSQQPGSTKPPPQQPGP 516
Query: 129 -RPSEPTPGSEALP---PGSL-PEVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRR 183
+PS PGS P PGS P + P P + Q + V++ G + +
Sbjct: 517 AKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKP-------SAQQSTKPVSQTGSGKPLQP 569
Query: 184 PGLAP 188
P ++P
Sbjct: 570 PTVSP 574
Score = 38.5 bits (88), Expect = 0.009
Identities = 57/233 (24%), Positives = 82/233 (35%), Gaps = 23/233 (9%)
Query: 58 PIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPW-RELTLPVSPADPAAPPSSPH 116
P G G +T Q DH++ P +R AS A R ++ S P+ PP
Sbjct: 252 PGTGKPIQGPTQTPQTDHAKL--PLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQP 309
Query: 117 APTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRD---VA 173
P +PP Q S+P P P L + P G P A
Sbjct: 310 TPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPA 369
Query: 174 EGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQRQ 233
+ ++ G + Q G A Q P +G+ P++QP GP QV +
Sbjct: 370 KPPAQQTGSEKPSSEQPG---------PKALAQPPGVGKTPAQQP-GPAKPPTQQVGTPK 419
Query: 234 RLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSG 286
LA+ PG + A P P+Q P +PA + G +G
Sbjct: 420 PLAQ-----QPGLQSPAKAPGPTKTPVQQPG--PGKIPAQQAGPGKTSAQQTG 465
Score = 34.7 bits (78), Expect = 0.12
Identities = 44/175 (25%), Positives = 58/175 (33%), Gaps = 26/175 (14%)
Query: 96 WRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRR 155
+R +L +S P PP P P PPP P P +P LP L V P
Sbjct: 2394 FRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKL-TVASP---- 2448
Query: 156 AVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPS 215
LF A LR +G L V T P + PS
Sbjct: 2449 VTTATPLFDAVTTLETTAV--LRSNG---------------LPVTRICTTAPPPVPPKPS 2491
Query: 216 RQPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSL 270
P G V RP+ ++ + + LP T+ P G +L SS+
Sbjct: 2492 SIPSGLVFTHRPEPSKPPIAPKPVIPQLP----TTTQKPTDIHPKPTGLSLTSSM 2542
Score = 28.5 bits (62), Expect = 8.9
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 93 SAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPH 152
S+P + T P A P S P +PPP QP +P ++A P + P
Sbjct: 675 SSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQP-TLHGSPSAKAKQPPEADSLSKPA 733
Query: 153 P 153
P
Sbjct: 734 P 734
Score = 28.5 bits (62), Expect = 8.9
Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 12/68 (17%)
Query: 75 HSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPT 134
HSQS P AP ++ P P PP S P +++ +
Sbjct: 955 HSQSGP------------GAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKA 1002
Query: 135 PGSEALPP 142
P +E L P
Sbjct: 1003 PAAEKLEP 1010
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 41.2 bits (95), Expect = 0.001
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 33/240 (13%)
Query: 103 VSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVL 162
++P P AP +P P+ P + PRP+ TPG LP +L R P P +V +L
Sbjct: 1321 LTPVPPLAP--APRPPSSGLPAVLNPRPTL-TPGR--LPTPTLGTARAPMPTPTLVRPLL 1375
Query: 163 FGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPV 222
V +P +V+ PG AP + ++ + P GP+ P P+
Sbjct: 1376 KLVHSPSPEVSASA-------PGAAP----------LTISSPLHVPSSLPGPASSPM-PI 1417
Query: 223 GVCRPQVAQRQRLARVCVRS---------LPGNRRLATRSCPAAFPLQGGATLPSSLPAP 273
P + V + S LP A + P + PL A+ P+ L +
Sbjct: 1418 PNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPAS-APLTIPISAPLTVSASGPALLTSV 1476
Query: 274 RLHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSG 333
L ++P++ G L + + L A AP+ + + PL+ + V G
Sbjct: 1477 TPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPG 1536
Score = 32.7 bits (73), Expect = 0.47
Identities = 55/213 (25%), Positives = 71/213 (33%), Gaps = 28/213 (13%)
Query: 92 SSAPWRELTL--PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVR 149
SS P L PV P PSS T P P PS + + AL P P +
Sbjct: 1635 SSTPGTSLASASPVPAPTPVLAPSSTQ--TMLPAPVPSPLPSPASTQTLALAPALAPTLG 1692
Query: 150 GPHPRRAVVVAV-----LFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAAT 204
G P + + + F Q A + + LAP G
Sbjct: 1693 GSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLG----------P 1742
Query: 205 VQRPRLGRGPSRQPRGPVG-------VCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAA 257
Q L P P PVG P + LA V++L + PAA
Sbjct: 1743 TQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAA 1802
Query: 258 FPLQGGATLPSSLPAPRLHLGSLLPSSSGGARL 290
Q A P+S +P SL+ S+SG A L
Sbjct: 1803 --AQTLALAPASTQSPASQASSLVVSASGAAPL 1833
Score = 32.0 bits (71), Expect = 0.80
Identities = 67/276 (24%), Positives = 87/276 (31%), Gaps = 47/276 (17%)
Query: 47 RVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPA 106
R P G A P PG + + S + PP S P L P+ P
Sbjct: 1025 RPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPA------SRPPGPVLLPPLQPN 1078
Query: 107 DPAAPPSSPH------APTRPPPQAVQPRPSEPTPG--SEALPPGSLPEVRGPHPRRAVV 158
+ P P +RPP + +P+ P P S A PPGS ++
Sbjct: 1079 SGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLK--------P 1130
Query: 159 VAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQP 218
+ V G P P A T RL P Q
Sbjct: 1131 LTVPPGYTFPPAAATTTSTTTATATTTAVP-------------APTPAPQRLILSPDMQA 1177
Query: 219 RGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLG 278
R P G +V +LA + R + A S P F +QG + +L +G
Sbjct: 1178 RLPSG----EVVSIGQLASLAQRPVAN----AGGSKPLTFQIQGNKLTLTGAQVRQLAVG 1229
Query: 279 SLLPSSSGGARLGDAAGTTHF--QPAH--LSHAAAP 310
P L A G H QPAH L A AP
Sbjct: 1230 QPRPLQRNVVHLVSAGGQHHLISQPAHVALIQAVAP 1265
Score = 30.8 bits (68), Expect = 1.8
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 101 LPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEVRGP 151
LP P PP S A T PPP P P P L S P + GP
Sbjct: 2482 LPSPPPPSQIPPCSSPACT-PPPACTPPPAHTPPPAQTCLVTPSSPLLLGP 2531
Score = 28.5 bits (62), Expect = 8.9
Identities = 65/299 (21%), Positives = 94/299 (31%), Gaps = 44/299 (14%)
Query: 5 PLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNAR 64
PLH+ PG + ++ + +PL++ VP+ L P P +A
Sbjct: 1400 PLHVPSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTL-----PAPASAP 1454
Query: 65 AGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQ 124
+ + S S P A +T P++P PAAP AP+ P
Sbjct: 1455 LTIPISAPLTVSASGP-------------ALLTSVTPPLAPVVPAAPGPPSLAPSGASPS 1501
Query: 125 A---------VQPRPSEPTPGSEALPPGSLPEVRGPHPRRAVVVAVLFGVQAPRRDVAEG 175
A S TPG L + V G + V V P +A
Sbjct: 1502 ASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPG---LNSTVAPACSPVLVPASALASP 1558
Query: 176 GLRRDGRRPG----LAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQVAQ 231
P LAP L L + + P P+ V P
Sbjct: 1559 FPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGA 1618
Query: 232 RQRLAR-------VCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPS 283
LA + S PG + PA P+ ++ + LPAP + S LPS
Sbjct: 1619 APVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAP---VPSPLPS 1674
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 41.2 bits (95), Expect = 0.001
Identities = 42/163 (25%), Positives = 60/163 (36%), Gaps = 18/163 (11%)
Query: 42 AGGRCRVPSGLRRLADPIPGNARA--GVARTEQRDHSQSSPPCRRLASYSFWSSAPWREL 99
+G R+ GL + + R G R+ RD S ++ S+ F S ++L
Sbjct: 720 SGNLQRIKEGLNKHVSSLWNCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQDL 779
Query: 100 TLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEP---------TPGSEALPPGSLPEVRG 150
P+A SP P P + +QP P+ P PG + P PE R
Sbjct: 780 V----KFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERP 835
Query: 151 PHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRG 193
P P + V G P A G+ G G+ Q G G
Sbjct: 836 PQPPGSTGVIAETGQAGP---PAGAGVSGRGLPRGVDGQTGSG 875
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 41.2 bits (95), Expect = 0.001
Identities = 46/139 (33%), Positives = 53/139 (38%), Gaps = 11/139 (7%)
Query: 58 PIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHA 117
P P A A A T++R S+ P R AS S P E PV +P
Sbjct: 519 PAPAPALASAA-TKERTESEVPP---RPASPKVTRSPP--ETAAPVEDMARRTKRPAPAR 572
Query: 118 PTRPPPQAVQPRPSEPTPGSEALPPGS-LPEVRGPHPRRAVVVAVLF-GVQAPRRDVAEG 175
PT PPPQ R S P P LPPGS P PRR V ++ V P
Sbjct: 573 PTMPPPQVSGSRSSPPAP---PLPPGSGSPGTPQALPRRLVGSSLRAPTVPPPLPPTPPQ 629
Query: 176 GLRRDGRRPGLAPQRGRGG 194
RR RR +P G
Sbjct: 630 PARRQSRRSPASPSPASPG 648
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQ----AVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAV 157
PV PA + SS +P PQ A P P P SEALPP + P P PRR+
Sbjct: 300 PVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPS--APAPRRS- 356
Query: 158 VVAVLFG 164
+++ LFG
Sbjct: 357 IISRLFG 363
Score = 31.2 bits (69), Expect = 1.4
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 13/104 (12%)
Query: 61 GNARAGVARTEQRDHSQSSP--PCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAP 118
G+A A + SP P +++ S P LP++ A P++ P P +
Sbjct: 281 GHASPLAANGQSPSPGSQSPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSE 340
Query: 119 TRPP---PQAVQPRPS------EPTPGSEAL--PPGSLPEVRGP 151
PP P A PR S +P +EA PP +P GP
Sbjct: 341 ALPPPACPSAPAPRRSIISRLFGTSPATEAAPPPPEPVPAAEGP 384
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 40.8 bits (94), Expect = 0.002
Identities = 66/240 (27%), Positives = 88/240 (36%), Gaps = 30/240 (12%)
Query: 57 DPIPGNARAGVARTEQRDHSQSS---PPCRRLA--SYSFWSSAPWRELTLPVSPADPAAP 111
DP + R + R S + PP + A + S WS+ +SP P P
Sbjct: 618 DPEKPGTPIVLRRAQPRARSSNDARRPPAPQPAPRTLSHWSAL--------LSPPVPPRP 669
Query: 112 PSS--PHAPTRPPPQAVQPRPSEPTPG-SEALPPGSLPEVRGPHPRRAVVVAVLFGVQAP 168
PSS P AP P + PRP+ P PP + P P P+ + V +P
Sbjct: 670 PSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSP 729
Query: 169 RRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPRGPVGVCRPQ 228
+V L G RP R RG PR R R+ P+ +P
Sbjct: 730 --EVPPDLLAFPGPRPSFRGSRRRGAAF-----GFPGASPRASR---RRAWSPLASPQPS 779
Query: 229 VAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSL---PAPRLHLGSLLPSSS 285
+ L C P + +L+ R+ P P A P SL PAPR G L P S
Sbjct: 780 LRSSPGLG-YCSPLAPPSPQLSLRTGPFQPPFLPPARRPRSLQESPAPRRAAGRLGPPGS 838
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 40.8 bits (94), Expect = 0.002
Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 101 LPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGS--EALPPGSLPEVRGPHPRRAVV 158
LP + P P S PT+ Q Q RP PG+ A PP S R P +A
Sbjct: 508 LPSPTSAPQQPASQAAPPTQ--GQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATR 565
Query: 159 VAVLFGVQAPRRDVA-EGGLRRDGRRPGLAPQR--GRGGLLLVVLHAATVQRPRLGRGPS 215
+ G P+ A GG +R G PQ+ G G A V PR G +
Sbjct: 566 QTSVSGPAPPKASGAPPGGQQRQG-----PPQKPPGPAGPTRQASQAGPV--PRTGPPTT 618
Query: 216 RQPR----GPVGVCRPQVAQR 232
+QPR GP G +PQ+AQ+
Sbjct: 619 QQPRPSGPGPAGRPKPQLAQK 639
Score = 32.7 bits (73), Expect = 0.47
Identities = 38/135 (28%), Positives = 45/135 (33%), Gaps = 29/135 (21%)
Query: 39 PLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAP--- 95
P+A G P R A P P T Q S +PP S AP
Sbjct: 535 PVAGGPGA--PPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKA--------SGAPPGG 584
Query: 96 WRELTLPVSPADPAAPPSSPH----APTRPPPQAVQPRPSEPTPG-----------SEAL 140
+ P P PA P P PP QPRPS P P S+ +
Sbjct: 585 QQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDV 644
Query: 141 PPGSLPEVRG-PHPR 154
PP + G PHP+
Sbjct: 645 PPPATAAAGGPPHPQ 659
Score = 30.0 bits (66), Expect = 3.0
Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 24/122 (19%)
Query: 112 PSSPHAPTRPPPQAVQPRPS------------EPTPGSEALPPGSLPEVRGPHPRRAVVV 159
P+ P A RPPPQ P+P P P + G P P P+R
Sbjct: 452 PAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQR---- 507
Query: 160 AVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPR 219
+ AP++ ++ G+ P G G A RP P RQ
Sbjct: 508 -LPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPG-------APPAARPPASPSPQRQAG 559
Query: 220 GP 221
P
Sbjct: 560 PP 561
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 40.8 bits (94), Expect = 0.002
Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 101 LPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGS--EALPPGSLPEVRGPHPRRAVV 158
LP + P P S PT+ Q Q RP PG+ A PP S R P +A
Sbjct: 508 LPSPTSAPQQPASQAAPPTQ--GQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATR 565
Query: 159 VAVLFGVQAPRRDVA-EGGLRRDGRRPGLAPQR--GRGGLLLVVLHAATVQRPRLGRGPS 215
+ G P+ A GG +R G PQ+ G G A V PR G +
Sbjct: 566 QTSVSGPAPPKASGAPPGGQQRQG-----PPQKPPGPAGPTRQASQAGPV--PRTGPPTT 618
Query: 216 RQPR----GPVGVCRPQVAQR 232
+QPR GP G +PQ+AQ+
Sbjct: 619 QQPRPSGPGPAGRPKPQLAQK 639
Score = 32.7 bits (73), Expect = 0.47
Identities = 38/135 (28%), Positives = 45/135 (33%), Gaps = 29/135 (21%)
Query: 39 PLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAP--- 95
P+A G P R A P P T Q S +PP S AP
Sbjct: 535 PVAGGPGA--PPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKA--------SGAPPGG 584
Query: 96 WRELTLPVSPADPAAPPSSPH----APTRPPPQAVQPRPSEPTPG-----------SEAL 140
+ P P PA P P PP QPRPS P P S+ +
Sbjct: 585 QQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDV 644
Query: 141 PPGSLPEVRG-PHPR 154
PP + G PHP+
Sbjct: 645 PPPATAAAGGPPHPQ 659
Score = 30.0 bits (66), Expect = 3.0
Identities = 30/122 (24%), Positives = 40/122 (32%), Gaps = 24/122 (19%)
Query: 112 PSSPHAPTRPPPQAVQPRPS------------EPTPGSEALPPGSLPEVRGPHPRRAVVV 159
P+ P A RPPPQ P+P P P + G P P P+R
Sbjct: 452 PAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQR---- 507
Query: 160 AVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQPR 219
+ AP++ ++ G+ P G G A RP P RQ
Sbjct: 508 -LPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPG-------APPAARPPASPSPQRQAG 559
Query: 220 GP 221
P
Sbjct: 560 PP 561
>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
Length = 520
Score = 40.0 bits (92), Expect = 0.003
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQ----AVQPRPSEPTPGSEALPPGSLPEVRGPHPRRAV 157
PV PA + SS +P PQ A P P P SEALPP + P P PRR++
Sbjct: 300 PVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPS--APAPRRSI 357
Query: 158 V 158
+
Sbjct: 358 I 358
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,157,504
Number of Sequences: 37866
Number of extensions: 1203872
Number of successful extensions: 18913
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 994
Number of HSP's that attempted gapping in prelim test: 10282
Number of HSP's gapped (non-prelim): 6668
length of query: 336
length of database: 18,247,518
effective HSP length: 103
effective length of query: 233
effective length of database: 14,347,320
effective search space: 3342925560
effective search space used: 3342925560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.