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Search of human proteins with 239748506
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748506 PREDICTED: hypothetical protein XP_002346707 [Homo
sapiens]
(146 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753967 PREDICTED: hypothetical protein [Homo sapiens] 308 8e-85
gi|239748506 PREDICTED: hypothetical protein XP_002346707 [Homo ... 308 8e-85
gi|239742472 PREDICTED: hypothetical protein XP_002342538 [Homo ... 306 5e-84
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 37 0.005
gi|239743797 PREDICTED: similar to cell recognition molecule CAS... 35 0.023
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 35 0.029
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens] 35 0.029
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens] 35 0.029
gi|116256350 tuberous sclerosis 2 isoform 4 [Homo sapiens] 33 0.066
gi|116256352 tuberous sclerosis 2 isoform 1 [Homo sapiens] 33 0.066
gi|167412124 tuberous sclerosis 2 isoform 5 [Homo sapiens] 33 0.066
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens] 33 0.066
gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo ... 33 0.11
gi|61966919 hypothetical protein LOC442444 [Homo sapiens] 33 0.11
gi|239748362 PREDICTED: hypothetical protein XP_002346639 [Homo ... 32 0.15
gi|134031945 SCO-spondin [Homo sapiens] 32 0.19
gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s... 32 0.25
gi|13994190 frizzled 8 [Homo sapiens] 32 0.25
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 31 0.43
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens] 31 0.43
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens] 31 0.43
gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens] 31 0.43
gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens] 31 0.43
gi|239754544 PREDICTED: hypothetical protein [Homo sapiens] 30 0.73
gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo ... 30 0.73
gi|239743138 PREDICTED: hypothetical protein XP_002342745 [Homo ... 30 0.73
gi|239508796 PREDICTED: hypothetical protein [Homo sapiens] 30 0.73
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 30 0.73
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 30 0.73
gi|148276998 zinc finger protein 628 [Homo sapiens] 30 0.73
>gi|239753967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 146
Score = 308 bits (790), Expect = 8e-85
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MPPQVWRPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR 60
MPPQVWRPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR
Sbjct: 1 MPPQVWRPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR 60
Query: 61 GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT 120
GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT
Sbjct: 61 GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT 120
Query: 121 APGPRALCQEVPCHLAWPQSRVAHLG 146
APGPRALCQEVPCHLAWPQSRVAHLG
Sbjct: 121 APGPRALCQEVPCHLAWPQSRVAHLG 146
>gi|239748506 PREDICTED: hypothetical protein XP_002346707 [Homo
sapiens]
Length = 146
Score = 308 bits (790), Expect = 8e-85
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MPPQVWRPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR 60
MPPQVWRPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR
Sbjct: 1 MPPQVWRPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR 60
Query: 61 GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT 120
GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT
Sbjct: 61 GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT 120
Query: 121 APGPRALCQEVPCHLAWPQSRVAHLG 146
APGPRALCQEVPCHLAWPQSRVAHLG
Sbjct: 121 APGPRALCQEVPCHLAWPQSRVAHLG 146
>gi|239742472 PREDICTED: hypothetical protein XP_002342538 [Homo
sapiens]
Length = 146
Score = 306 bits (783), Expect = 5e-84
Identities = 145/146 (99%), Positives = 145/146 (99%)
Query: 1 MPPQVWRPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR 60
MPPQVW PPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR
Sbjct: 1 MPPQVWGPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVR 60
Query: 61 GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT 120
GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT
Sbjct: 61 GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLT 120
Query: 121 APGPRALCQEVPCHLAWPQSRVAHLG 146
APGPRALCQEVPCHLAWPQSRVAHLG
Sbjct: 121 APGPRALCQEVPCHLAWPQSRVAHLG 146
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 37.4 bits (85), Expect = 0.005
Identities = 35/122 (28%), Positives = 45/122 (36%), Gaps = 24/122 (19%)
Query: 13 GREEPTGSPHAAEPRVVVVGRGSRMVAGVVGG-----EAQGPPANLVTYVGVR------- 60
G +EP SP +P + +G G GG + G P T G +
Sbjct: 1196 GGDEPPTSPRQLQPAPPLAPQGRPWTPGQPGGLVGCPGSGGSPMRRETSAGFQNGLNYIA 1255
Query: 61 -------GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGV----CVEPGPGAL 109
G +P+PP P QPG + R L A G+G C PGPGAL
Sbjct: 1256 IDVREEPGLPPQPQPPPP-PLPQPGDKSSWGRTRSLGGLISAVGVGSTGGGCGGPGPGAL 1314
Query: 110 LP 111
P
Sbjct: 1315 PP 1316
Score = 28.1 bits (61), Expect = 2.8
Identities = 36/125 (28%), Positives = 43/125 (34%), Gaps = 19/125 (15%)
Query: 8 PPLLSG--REEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVRGARQR 65
PP +G R T S A P R + GG A G A V V G+
Sbjct: 332 PPSQTGLVRRSRTDSLAATPPAAKCSSCRVRTASEGDGGAAAGAAAAGARPVSVAGSPLS 391
Query: 66 PEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGAL-------LPDLHWLAL 118
P P R P +R LS C G V + P GAL +P H
Sbjct: 392 PGPV----------RAPLSRSHTLSGGCGGRGSKVALLPAGGALQHSRSMSMPVAHSPPA 441
Query: 119 LTAPG 123
T+PG
Sbjct: 442 ATSPG 446
>gi|239743797 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 944
Score = 35.0 bits (79), Expect = 0.023
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 18/117 (15%)
Query: 5 VWRPPLLSGREEPTGSPHAAEPRVVVVG----RGSRMVAGVVGGEAQG----PPANLVTY 56
V +P +L + E G+ A P RG+ AG+ GGE Q P +L+
Sbjct: 60 VIKPGVLHLQAEADGAVFGASPCTTAAPPRWERGTEEAAGITGGERQAELGRPSRSLLDS 119
Query: 57 VGVR-----GARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGA 108
R R PEP S+P P P R+R L C + G + GPGA
Sbjct: 120 RCCRPPPAPSVRDAPEPAASVPGAAPRG-PERSR----KLRCESAGPTSETQLGPGA 171
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 34.7 bits (78), Expect = 0.029
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 28/126 (22%)
Query: 8 PPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVT------YVGVRG 61
PP +G ++P PH GS+ ++G A+ PPA++ V
Sbjct: 104 PPPPTGEKQPR--PHGFR-----CSHGSKRAPALLGAPARRPPAHIPAQPRWPRLQPVAK 156
Query: 62 ARQRPEPPLSLP------TLQPGSRP-------PRA-RVSELSLACRACGLGVCVEPGPG 107
R RP PP LP L PG RP P+A R +++ + C G+ E GP
Sbjct: 157 RRARPVPP-GLPGAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIEETGPA 215
Query: 108 ALLPDL 113
+ DL
Sbjct: 216 RQISDL 221
>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 34.7 bits (78), Expect = 0.029
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 28/126 (22%)
Query: 8 PPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVT------YVGVRG 61
PP +G ++P PH GS+ ++G A+ PPA++ V
Sbjct: 104 PPPPTGEKQPR--PHGFR-----CSHGSKRAPALLGAPARRPPAHIPAQPRWPRLQPVAK 156
Query: 62 ARQRPEPPLSLP------TLQPGSRP-------PRA-RVSELSLACRACGLGVCVEPGPG 107
R RP PP LP L PG RP P+A R +++ + C G+ E GP
Sbjct: 157 RRARPVPP-GLPGAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIEETGPA 215
Query: 108 ALLPDL 113
+ DL
Sbjct: 216 RQISDL 221
>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 34.7 bits (78), Expect = 0.029
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 28/126 (22%)
Query: 8 PPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVT------YVGVRG 61
PP +G ++P PH GS+ ++G A+ PPA++ V
Sbjct: 104 PPPPTGEKQPR--PHGFR-----CSHGSKRAPALLGAPARRPPAHIPAQPRWPRLQPVAK 156
Query: 62 ARQRPEPPLSLP------TLQPGSRP-------PRA-RVSELSLACRACGLGVCVEPGPG 107
R RP PP LP L PG RP P+A R +++ + C G+ E GP
Sbjct: 157 RRARPVPP-GLPGAPKQAALTPGRRPLTPAAFAPKASRDQQVTDSTTICQRGLIEETGPA 215
Query: 108 ALLPDL 113
+ DL
Sbjct: 216 RQISDL 221
>gi|116256350 tuberous sclerosis 2 isoform 4 [Homo sapiens]
Length = 1740
Score = 33.5 bits (75), Expect = 0.066
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 31 VGRGSRMVAGVVGGEAQ-GPPANLVTYVGVRGARQRPEPPLSLPTLQPGSRPPRARVSEL 89
VG G+R + G+ GE Q GP ++ V VR ++ P L Q SR R RV +
Sbjct: 1029 VGTGTRSLLGLDSGELQSGPESSSSPGVHVRQTKEAP-AKLESQAGQQVSRGARDRVRSM 1087
Query: 90 SLACRACGLGVCVEPGPGAL-LPDLHWLALLTAPGPR 125
S G G+ V GAL +P +L T+PGPR
Sbjct: 1088 S-----GGHGLRV----GALDVPASQFLGSATSPGPR 1115
>gi|116256352 tuberous sclerosis 2 isoform 1 [Homo sapiens]
Length = 1807
Score = 33.5 bits (75), Expect = 0.066
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 31 VGRGSRMVAGVVGGEAQ-GPPANLVTYVGVRGARQRPEPPLSLPTLQPGSRPPRARVSEL 89
VG G+R + G+ GE Q GP ++ V VR ++ P L Q SR R RV +
Sbjct: 1073 VGTGTRSLLGLDSGELQSGPESSSSPGVHVRQTKEAP-AKLESQAGQQVSRGARDRVRSM 1131
Query: 90 SLACRACGLGVCVEPGPGAL-LPDLHWLALLTAPGPR 125
S G G+ V GAL +P +L T+PGPR
Sbjct: 1132 S-----GGHGLRV----GALDVPASQFLGSATSPGPR 1159
>gi|167412124 tuberous sclerosis 2 isoform 5 [Homo sapiens]
Length = 1784
Score = 33.5 bits (75), Expect = 0.066
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 31 VGRGSRMVAGVVGGEAQ-GPPANLVTYVGVRGARQRPEPPLSLPTLQPGSRPPRARVSEL 89
VG G+R + G+ GE Q GP ++ V VR ++ P L Q SR R RV +
Sbjct: 1073 VGTGTRSLLGLDSGELQSGPESSSSPGVHVRQTKEAP-AKLESQAGQQVSRGARDRVRSM 1131
Query: 90 SLACRACGLGVCVEPGPGAL-LPDLHWLALLTAPGPR 125
S G G+ V GAL +P +L T+PGPR
Sbjct: 1132 S-----GGHGLRV----GALDVPASQFLGSATSPGPR 1159
>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
Length = 1321
Score = 33.5 bits (75), Expect = 0.066
Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 17/126 (13%)
Query: 9 PLLSGREEPTGSPHAAEPRVVVVGRGSRM-VAGVVG-GEAQGPPANLVTYV-----GVRG 61
P L G E + P +E V + M V ++G G+++ P A+L V G G
Sbjct: 498 PGLQGGMEASAQPPTSEAAVNQMEPPLAMAVTEMLGSGQSRSPWADLTNEVDMPGAGSAG 557
Query: 62 ARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWL---AL 118
+ PEP L PT+ P S +R L L +A G P PDL W A
Sbjct: 558 GKSSPEPWLWPPTMVPPSISGHSRAPVLELE-KAEG------PSARPATPDLFWSPLEAT 610
Query: 119 LTAPGP 124
++AP P
Sbjct: 611 VSAPSP 616
>gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo
sapiens]
Length = 1032
Score = 32.7 bits (73), Expect = 0.11
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 27 RVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVRGARQRPEPPLSLPTLQPGSRPPRARV 86
+ +V G G +V+G+ GP +V+ G + +S P S P +A V
Sbjct: 403 KAIVSGPGKAIVSGLGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIV 462
Query: 87 SELSLACRACGLGVCVEPGPGALLPDLHWLALLTAPG 123
S L A C LG + GPG + A+++ PG
Sbjct: 463 SSLGKAI-VCSLGKAIVSGPGKAIVSGPGKAIVSGPG 498
Score = 30.4 bits (67), Expect = 0.56
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 27 RVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVRGARQRPEPPLSLP----TLQPG---- 78
+ +V G G +V+G+ GP +V+ +G + +S P PG
Sbjct: 171 KAIVSGPGKAIVSGLGKAIVSGPGKAIVSGLGKAIVSSLGKAIVSGPGKAIVSGPGKAIV 230
Query: 79 SRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLTAPG 123
S P +A VS L A C LG + GPG + A+++ PG
Sbjct: 231 SGPGKAIVSSLGKAI-VCSLGKAIVSGPGKAIVSGLGKAIVSGPG 274
Score = 30.4 bits (67), Expect = 0.56
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 27 RVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVRGARQRPEPPLSLP----TLQPG---- 78
+ +V G G +V+G+ GP +V+ +G + +S P PG
Sbjct: 323 KAIVSGPGKAIVSGLGKAIVSGPGKAIVSGLGKAIVSSLGKAIVSGPGKAIVSGPGKAIV 382
Query: 79 SRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLALLTAPG 123
S P +A VS L A C LG + GPG + A+++ PG
Sbjct: 383 SGPGKAIVSSLGKAI-VCSLGKAIVSGPGKAIVSGLGKAIVSGPG 426
Score = 27.3 bits (59), Expect = 4.7
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 27 RVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVRGARQRPEPPLSLPTLQPGSRPPRARV 86
+ +V G G +V+G GP +V+ G + +S P S P +A V
Sbjct: 892 KAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIV 951
Query: 87 SELSLACRACGLGVCVEPGPGALLPDLHWLALLTAPG 123
S A GLG + GPG + A+++ PG
Sbjct: 952 SSPGKAI-VSGLGKAIVSGPGKAIVSGPGKAIVSGPG 987
Score = 26.6 bits (57), Expect = 8.0
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Query: 26 PRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVRGARQRPEPPLSLPTLQPGSRPPRAR 85
P+ +V G G +V+G GP +V+ G + +S P S P +A
Sbjct: 26 PKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAIVSGPGKAI 85
Query: 86 VSELSLACRACGLGVCVEPGPGALLPDLHWLALLTAPG 123
VS A G G + GPG + A+++ PG
Sbjct: 86 VSGPGKAI-VSGPGKAIVSGPGKAIVSGPGKAIVSGPG 122
>gi|61966919 hypothetical protein LOC442444 [Homo sapiens]
Length = 1035
Score = 32.7 bits (73), Expect = 0.11
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 19/91 (20%)
Query: 60 RGARQRPEPP-LSLPTLQPGSRPPRARVSELSLACRACGLG-VCVEPGPGALLPDLHWLA 117
RG+ RPEPP + L+P PP+ RVS L L G+ +C EP P+
Sbjct: 434 RGSHLRPEPPETGVSHLRP--EPPKTRVSSLHLEPPETGVSHLCPEP------PEKDVSH 485
Query: 118 LLTAP---GPRALCQEVPCHLAWPQSRVAHL 145
L P G LC E P++RV+HL
Sbjct: 486 LRPEPPDTGVSHLCPEP------PKTRVSHL 510
>gi|239748362 PREDICTED: hypothetical protein XP_002346639 [Homo
sapiens]
Length = 165
Score = 32.3 bits (72), Expect = 0.15
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 47 QGPPANLVTYVGVRGAR-QRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPG 105
+GPPA+L+T++ V + P+ + LP LQPG R + + G+ C G
Sbjct: 23 RGPPASLITHLDVEVHQLALPQDVIDLPCLQPGMRLLLFLLEVNENPQTSFGVVQCGFVG 82
Query: 106 PGAL 109
PGA+
Sbjct: 83 PGAI 86
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 32.0 bits (71), Expect = 0.19
Identities = 33/104 (31%), Positives = 38/104 (36%), Gaps = 12/104 (11%)
Query: 34 GSRMVAGVVGGEAQGPPANLVTYVGVR-----GARQRPEPPLSLPTLQPGSRPPRARVSE 88
G+ A G E QGP + +R G P P S+P G R R S
Sbjct: 3012 GTAPPAAFGGAECQGPTME-AEFCSLRPCPGPGGEWGPWSPCSVPC--GGGYRNRTRGSS 3068
Query: 89 LSLA-CRACGLGVCVEPGPGALLPDLHWLALLTAPGPRALCQEV 131
SL CGL C P PG D WL P A C E+
Sbjct: 3069 RSLMEFSTCGLQPCAGPVPGMCPRDKQWLDCAQGP---ASCAEL 3109
>gi|114326455 chromodomain helicase DNA binding protein 8 [Homo
sapiens]
Length = 2302
Score = 31.6 bits (70), Expect = 0.25
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 30 VVGRGSRMVAGVVGGEAQGPPANLVT-YVGVRGARQR----PEPPLSLPTLQPGSRPPRA 84
+V +G+++ A AQG PA +VT + V+ +Q+ P+PP S P QP +PP
Sbjct: 35 IVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSSQP--QP-QQPPST 91
Query: 85 RVSELSLACRACGLGVCVEPGPGALLP 111
+ LS +A +G PG +P
Sbjct: 92 QPVTLSSVQQAQIMGPGQSPGQRLSVP 118
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 31.6 bits (70), Expect = 0.25
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 8 PPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVRGARQRPE 67
PP G + P+GS H P RG G GG+A PPA G G + RP
Sbjct: 168 PPPPPGEQPPSGSGHGRPPGARPPHRGGGRGGG--GGDAAAPPAR----GGGGGGKARP- 220
Query: 68 PPLSLPTLQPG--SRPPRARVS 87
P +PG R P VS
Sbjct: 221 PGGGAAPCEPGCQCRAPMVSVS 242
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 30.8 bits (68), Expect = 0.43
Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 39 AGVVGGEAQGPPANLVTYVG---VRGARQRPEPPLSLPTLQPGSRPPRARVSELSLACRA 95
AG GGEA GPP + V G P PP PT +P PP L RA
Sbjct: 4 AGGEGGEA-GPPMSAQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGPRLL--RA 60
Query: 96 CGLGVCVEPGP 106
C L + EP P
Sbjct: 61 CSLLLPTEPAP 71
>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 30.8 bits (68), Expect = 0.43
Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 39 AGVVGGEAQGPPANLVTYVG---VRGARQRPEPPLSLPTLQPGSRPPRARVSELSLACRA 95
AG GGEA GPP + V G P PP PT +P PP L RA
Sbjct: 4 AGGEGGEA-GPPMSAQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGPRLL--RA 60
Query: 96 CGLGVCVEPGP 106
C L + EP P
Sbjct: 61 CSLLLPTEPAP 71
>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 30.8 bits (68), Expect = 0.43
Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 39 AGVVGGEAQGPPANLVTYVG---VRGARQRPEPPLSLPTLQPGSRPPRARVSELSLACRA 95
AG GGEA GPP + V G P PP PT +P PP L RA
Sbjct: 4 AGGEGGEA-GPPMSAQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGPRLL--RA 60
Query: 96 CGLGVCVEPGP 106
C L + EP P
Sbjct: 61 CSLLLPTEPAP 71
>gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens]
Length = 531
Score = 30.8 bits (68), Expect = 0.43
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Query: 58 GVRGARQ-RPEPPLSLPTLQPGSRPPR---------ARVSELSLACRACGLGVCVEPGPG 107
G GAR+ RPE P L + GSRP + R + R C LG V PGPG
Sbjct: 20 GASGAREKRPEEPRPLEEDRAGSRPTQKGDLRGAAGGRTTPPGGGSRGCSLG--VSPGPG 77
>gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens]
Length = 531
Score = 30.8 bits (68), Expect = 0.43
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Query: 58 GVRGARQ-RPEPPLSLPTLQPGSRPPR---------ARVSELSLACRACGLGVCVEPGPG 107
G GAR+ RPE P L + GSRP + R + R C LG V PGPG
Sbjct: 20 GASGAREKRPEEPRPLEEDRAGSRPTQKGDLRGAAGGRTTPPGGGSRGCSLG--VSPGPG 77
>gi|239754544 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 30.0 bits (66), Expect = 0.73
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 63 RQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCV 102
RQ PEPP L+ G PR + + CR LGV V
Sbjct: 127 RQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLV 166
>gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo
sapiens]
Length = 201
Score = 30.0 bits (66), Expect = 0.73
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 63 RQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCV 102
RQ PEPP L+ G PR + + CR LGV V
Sbjct: 127 RQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLV 166
>gi|239743138 PREDICTED: hypothetical protein XP_002342745 [Homo
sapiens]
Length = 201
Score = 30.0 bits (66), Expect = 0.73
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 63 RQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCV 102
RQ PEPP L+ G PR + + CR LGV V
Sbjct: 127 RQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLV 166
>gi|239508796 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 30.0 bits (66), Expect = 0.73
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 63 RQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCV 102
RQ PEPP L+ G PR + + CR LGV V
Sbjct: 127 RQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLV 166
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 30.0 bits (66), Expect = 0.73
Identities = 34/134 (25%), Positives = 49/134 (36%), Gaps = 10/134 (7%)
Query: 2 PPQVWRPPLLSGREEPTGSPHAAEPRVVVVGRGSRMVAGVVGGEAQGPPANLVTYVGVRG 61
PP PP SG P +P A P GS+ G + GP ++ V +R
Sbjct: 503 PPATMVPPT-SGTSTPRTAP--AVPTPGSAPTGSKKPIGSEASKKAGPKSSPRKPVPLRP 559
Query: 62 ARQRPEPPLSLPTLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALLPDLHWLA---- 117
+ + PLS T +P R P+ A + P P + + LA
Sbjct: 560 GKAARDVPLSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSSGYSIFHLAGSTP 619
Query: 118 ---LLTAPGPRALC 128
L+ PGP+ C
Sbjct: 620 FPLLMGPPGPKGDC 633
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 30.0 bits (66), Expect = 0.73
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 21/87 (24%)
Query: 61 GARQRPEPPLSLP--------TLQPGSRPPRARVSELSLACRACGLGVCVEPGPGALL-- 110
GARQ PE P ++P TL+PG P A V CGL V ALL
Sbjct: 161 GARQAPESPSTIPVPSQPQNSTLRPGPAAPIALVPVF------CGLLVAKSLVLSALLVW 214
Query: 111 -PDLHWLALLTAPGPRAL-CQEVPCHL 135
D+ W ++ R+L Q+ CHL
Sbjct: 215 WGDIWWKTMMEL---RSLDTQKATCHL 238
>gi|148276998 zinc finger protein 628 [Homo sapiens]
Length = 1055
Score = 30.0 bits (66), Expect = 0.73
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 22/91 (24%)
Query: 41 VVGGEAQGP---PA--NLVTYVGVRGAR---------QRPEPP--------LSLPTLQPG 78
V GG AQ P PA N T++ V+ A+ Q P PP + LP+ G
Sbjct: 688 VAGGTAQAPSLGPAAPNSQTFLLVQTAQGLQLIPSSVQPPTPPPPPAPPKLILLPSSSAG 747
Query: 79 SRPPRARVSELSLACRACGLGVCVEPGPGAL 109
+ RAR ++ G GV PGPG L
Sbjct: 748 AGGGRARQGPRAVGKAGQGAGVVWLPGPGGL 778
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,725,979
Number of Sequences: 37866
Number of extensions: 519669
Number of successful extensions: 2224
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 2086
Number of HSP's gapped (non-prelim): 261
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.