Search of human proteins with 239748206

Search of human proteins with 239748206

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748206 PREDICTED: hypothetical protein XP_002346613 [Homo
sapiens]
         (121 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753615 PREDICTED: hypothetical protein XP_002345718 [Homo ...   256   4e-69
gi|239748206 PREDICTED: hypothetical protein XP_002346613 [Homo ...   256   4e-69
gi|239742104 PREDICTED: hypothetical protein XP_002342406 [Homo ...   256   4e-69
gi|48375167 microtubule-associated protein 6 isoform 2 [Homo sap...    35   0.010
gi|48375173 microtubule-associated protein 6 isoform 1 [Homo sap...    35   0.010
gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo ...    32   0.11 
gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo ...    32   0.11 
gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo ...    32   0.11 
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]       32   0.15 
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]       32   0.15 
gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [H...    30   0.33 
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H...    30   0.33 
gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [H...    30   0.33 
gi|169213954 PREDICTED: similar to hCG2040171 [Homo sapiens]           30   0.43 
gi|239751793 PREDICTED: similar to hCG2040171 [Homo sapiens]           30   0.43 
gi|239746284 PREDICTED: similar to hCG2040171 [Homo sapiens]           30   0.43 
gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens]       30   0.57 
gi|222418611 integrin alpha 7 isoform 2 precursor [Homo sapiens]       30   0.57 
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ...    30   0.57 
gi|61966741 TMF regulated nuclear protein [Homo sapiens]               30   0.57 
gi|40805108 putative small membrane protein NID67 [Homo sapiens]       30   0.57 
gi|6631102 protocadherin 8 isoform 1 precursor [Homo sapiens]          29   0.74 
gi|61835232 growth differentiation factor 7 preproprotein [Homo ...    29   0.74 
gi|153792074 proline rich 12 [Homo sapiens]                            29   0.74 
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]            29   0.97 
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]            29   0.97 
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]            29   0.97 
gi|4759160 small nuclear ribonucleoprotein polypeptide D3 [Homo ...    29   0.97 
gi|239755501 PREDICTED: hypothetical protein [Homo sapiens]            28   1.3  
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]            28   1.3  

>gi|239753615 PREDICTED: hypothetical protein XP_002345718 [Homo
           sapiens]
          Length = 121

 Score =  256 bits (653), Expect = 4e-69
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED 60
           MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED
Sbjct: 1   MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED 60

Query: 61  LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA 120
           LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA
Sbjct: 61  LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA 120

Query: 121 E 121
           E
Sbjct: 121 E 121


>gi|239748206 PREDICTED: hypothetical protein XP_002346613 [Homo
           sapiens]
          Length = 121

 Score =  256 bits (653), Expect = 4e-69
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED 60
           MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED
Sbjct: 1   MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED 60

Query: 61  LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA 120
           LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA
Sbjct: 61  LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA 120

Query: 121 E 121
           E
Sbjct: 121 E 121


>gi|239742104 PREDICTED: hypothetical protein XP_002342406 [Homo
           sapiens]
          Length = 121

 Score =  256 bits (653), Expect = 4e-69
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED 60
           MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED
Sbjct: 1   MLTWISVSSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGED 60

Query: 61  LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA 120
           LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA
Sbjct: 61  LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRA 120

Query: 121 E 121
           E
Sbjct: 121 E 121


>gi|48375167 microtubule-associated protein 6 isoform 2 [Homo
           sapiens]
          Length = 439

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 30/84 (35%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 20  HMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGEDLDWNARATGVARAPGAGEE 79
           H      P PP    +  L P   P    +A+ T+   GE LD  ARATG A  P    E
Sbjct: 39  HPGAPPQPPPPQQQAQPALAP---PSARAVAIETQPAQGE-LDAVARATGPAPGPTGERE 94

Query: 80  ALAAAG--GRGRGLGRSRVTGFRD 101
             A  G  G G GLG    +G  D
Sbjct: 95  PAAGPGRSGPGPGLGSGSTSGPAD 118


>gi|48375173 microtubule-associated protein 6 isoform 1 [Homo
           sapiens]
          Length = 813

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 30/84 (35%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 20  HMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGEDLDWNARATGVARAPGAGEE 79
           H      P PP    +  L P   P    +A+ T+   GE LD  ARATG A  P    E
Sbjct: 39  HPGAPPQPPPPQQQAQPALAP---PSARAVAIETQPAQGE-LDAVARATGPAPGPTGERE 94

Query: 80  ALAAAG--GRGRGLGRSRVTGFRD 101
             A  G  G G GLG    +G  D
Sbjct: 95  PAAGPGRSGPGPGLGSGSTSGPAD 118


>gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo
           sapiens]
          Length = 330

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)

Query: 18  PMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGEDLDWNARATGVARAPGAG 77
           P   AR +   PP W L+  + P   P     ++C ++P G ++D   R+       G  
Sbjct: 81  PAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGCAGPS 140

Query: 78  EEALAAAGGRGR-GLGRSRVTGFRDC 102
             +     G GR     +R +  RDC
Sbjct: 141 CFSTGICEGHGRVSAAPARGSQPRDC 166


>gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo
           sapiens]
          Length = 330

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)

Query: 18  PMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGEDLDWNARATGVARAPGAG 77
           P   AR +   PP W L+  + P   P     ++C ++P G ++D   R+       G  
Sbjct: 81  PAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGCAGPS 140

Query: 78  EEALAAAGGRGR-GLGRSRVTGFRDC 102
             +     G GR     +R +  RDC
Sbjct: 141 CFSTGICEGHGRVSAAPARGSQPRDC 166


>gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo
           sapiens]
          Length = 179

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)

Query: 18  PMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGEDLDWNARATGVARAPGAG 77
           P   AR +   PP W L+  + P   P     ++C ++P G ++D   R+       G  
Sbjct: 81  PAGGARGSGGGPPPWRLRNEVSPKASPPRPTCSVCRKSPSGAEMDRAPRSGRFLGCAGPS 140

Query: 78  EEALAAAGGRGR-GLGRSRVTGFRDC 102
             +     G GR     +R +  RDC
Sbjct: 141 CFSTGICEGHGRVSAAPARGSQPRDC 166


>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
          Length = 1415

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 55  APPGEDLDWNARATGVARAPGAG------EEALAAAGGRGRGLGRSRVTGFRDCPQISR- 107
           A PG++    +    + RAP +G      EE + + G  G   GR  + GFRD P+  R 
Sbjct: 16  AAPGQEPTPQSHPRWLRRAPVSGPDLSSEEERVGSQGQAGPQAGRDALLGFRDVPREPRR 75

Query: 108 ---VAARAP 113
               A RAP
Sbjct: 76  TRKPATRAP 84


>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
          Length = 1415

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 55  APPGEDLDWNARATGVARAPGAG------EEALAAAGGRGRGLGRSRVTGFRDCPQISR- 107
           A PG++    +    + RAP +G      EE + + G  G   GR  + GFRD P+  R 
Sbjct: 16  AAPGQEPTPQSHPRWLRRAPVSGPDLSSEEERVGSQGQAGPQAGRDALLGFRDVPREPRR 75

Query: 108 ---VAARAP 113
               A RAP
Sbjct: 76  TRKPATRAP 84


>gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
           sapiens]
          Length = 601

 Score = 30.4 bits (67), Expect = 0.33
 Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 53  TEAPPG-EDLDWNARATGVAR--APGAGEEALAAAGGRGRGLGRS 94
           +EA PG ED D  A  T  A   AP  GE+  A AG  G G GRS
Sbjct: 509 SEADPGAEDADEAASTTKEAARVAPATGEDENAPAGLEGLGQGRS 553


>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
           sapiens]
          Length = 541

 Score = 30.4 bits (67), Expect = 0.33
 Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 53  TEAPPG-EDLDWNARATGVAR--APGAGEEALAAAGGRGRGLGRS 94
           +EA PG ED D  A  T  A   AP  GE+  A AG  G G GRS
Sbjct: 449 SEADPGAEDADEAASTTKEAARVAPATGEDENAPAGLEGLGQGRS 493


>gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
           sapiens]
          Length = 601

 Score = 30.4 bits (67), Expect = 0.33
 Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 53  TEAPPG-EDLDWNARATGVAR--APGAGEEALAAAGGRGRGLGRS 94
           +EA PG ED D  A  T  A   AP  GE+  A AG  G G GRS
Sbjct: 509 SEADPGAEDADEAASTTKEAARVAPATGEDENAPAGLEGLGQGRS 553


>gi|169213954 PREDICTED: similar to hCG2040171 [Homo sapiens]
          Length = 354

 Score = 30.0 bits (66), Expect = 0.43
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 75  GAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRAE 121
           G G  A       G GLG  R +G    P+++   A  P  ALG  E
Sbjct: 269 GGGPTATPLLASTGEGLGPERPSGLAAAPRLALPGAGGPEAALGGKE 315


>gi|239751793 PREDICTED: similar to hCG2040171 [Homo sapiens]
          Length = 354

 Score = 30.0 bits (66), Expect = 0.43
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 75  GAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRAE 121
           G G  A       G GLG  R +G    P+++   A  P  ALG  E
Sbjct: 269 GGGPTATPLLASTGEGLGPERPSGLAAAPRLALPGAGGPEAALGGKE 315


>gi|239746284 PREDICTED: similar to hCG2040171 [Homo sapiens]
          Length = 354

 Score = 30.0 bits (66), Expect = 0.43
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 75  GAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRAE 121
           G G  A       G GLG  R +G    P+++   A  P  ALG  E
Sbjct: 269 GGGPTATPLLASTGEGLGPERPSGLAAAPRLALPGAGGPEAALGGKE 315


>gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens]
          Length = 1141

 Score = 29.6 bits (65), Expect = 0.57
 Identities = 13/23 (56%), Positives = 14/23 (60%)

Query: 23 RMAAPQPPSWLLKGILQPLGLPG 45
          R   P+P SWLL G  Q L LPG
Sbjct: 60 RQLQPRPQSWLLVGAPQALALPG 82


>gi|222418611 integrin alpha 7 isoform 2 precursor [Homo sapiens]
          Length = 1137

 Score = 29.6 bits (65), Expect = 0.57
 Identities = 13/23 (56%), Positives = 14/23 (60%)

Query: 23 RMAAPQPPSWLLKGILQPLGLPG 45
          R   P+P SWLL G  Q L LPG
Sbjct: 60 RQLQPRPQSWLLVGAPQALALPG 82


>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
           sapiens]
          Length = 756

 Score = 29.6 bits (65), Expect = 0.57
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 18/77 (23%)

Query: 37  ILQPLG--LPGFSCMALCTEAPPGEDLDWNARATGVARAPGAGEEALAAAGGRGRGLGRS 94
           +LQ LG  LPG +         PG++L   AR       PG G  +L+   G G G+GR 
Sbjct: 568 LLQRLGWRLPGQA---------PGQELLGQAR-------PGGGLSSLSGGPGGGSGVGRW 611

Query: 95  RVTGFRDCPQISRVAAR 111
           ++ G      ++  AA+
Sbjct: 612 QLPGRAAAEDVAEAAAK 628


>gi|61966741 TMF regulated nuclear protein [Homo sapiens]
          Length = 227

 Score = 29.6 bits (65), Expect = 0.57
 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 12/77 (15%)

Query: 27  PQPPSWLLKGILQPLGLPGFSCM---ALCTEAPPGEDLD---WNARATGVA--RAPGAGE 78
           P PP+      L P   PG S     A    A   ED +   W   A+G+A    PG G 
Sbjct: 35  PPPPT----PTLTPTPTPGQSPPLPDAAGASAGAAEDQELQRWRQGASGIAGLAGPGGGS 90

Query: 79  EALAAAGGRGRGLGRSR 95
            A A AGGR   L  +R
Sbjct: 91  GAAAGAGGRALELAEAR 107


>gi|40805108 putative small membrane protein NID67 [Homo sapiens]
          Length = 135

 Score = 29.6 bits (65), Expect = 0.57
 Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 20/93 (21%)

Query: 40  PLGLPGFSCMALCTEAPPG---EDLDWNARATGVARAPGAGEEAL----AAAGGRG---- 88
           P  LP  +   L   +P G   E+L W+ R  G  R+ G  ++      AA  GR     
Sbjct: 19  PWSLPSLAGSFLPERSPQGTLEEELSWSCRGPGTGRSGGGPQQPRIPEPAARPGRSCALP 78

Query: 89  -RGLGRSRVTGFRDCPQISRVAARAPAPALGRA 120
             G  RSR T F++ P       RA  P LG A
Sbjct: 79  PPGARRSRGT-FQELP-------RAEVPGLGVA 103


>gi|6631102 protocadherin 8 isoform 1 precursor [Homo sapiens]
          Length = 1070

 Score = 29.3 bits (64), Expect = 0.74
 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 67  ATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAPALGRAE 121
           A G A APG+ EEA   AG R          G    P     AA AP PA+  AE
Sbjct: 795 AGGGASAPGSPEEAARGAGPRPNMFDVLTFPGTGKAP-FGSPAADAPPPAVAAAE 848


>gi|61835232 growth differentiation factor 7 preproprotein [Homo
           sapiens]
          Length = 450

 Score = 29.3 bits (64), Expect = 0.74
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 48  CMALCTEAPPGEDLDWNARATGVARAPGAGEEALAAAGGRGRGLGR--SRVTGFRDCPQI 105
           C+ L +   P + L+    A  V RA GAG       GG G G GR  ++  G    P  
Sbjct: 10  CLWLLSACRPRDGLE----AAAVLRAAGAGPVRSPGGGGGGGGGGRTLAQAAGAAAVPAA 65

Query: 106 SRVAARAPAPALG 118
           +   ARA   A G
Sbjct: 66  AVPRARAARRAAG 78


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 29.3 bits (64), Expect = 0.74
 Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 14/85 (16%)

Query: 14  GNLRPMHMARMAAPQPPSWLLKGILQPLGLPGFSCMALCTEAPPGEDLDWNARATGVARA 73
           G   P H+ R     P +    G+  P G PG    ++   AP                 
Sbjct: 557 GEASPSHIIRPLQSPPATGRPPGVGSP-GAPGKYLSSVLASAP-------------FLAP 602

Query: 74  PGAGEEALAAAGGRGRGLGRSRVTG 98
           PGAG  A  A G +G+G G   + G
Sbjct: 603 PGAGSYAAGAGGYKGKGDGSELLAG 627


>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 28.9 bits (63), Expect = 0.97
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 9/51 (17%)

Query: 71  ARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAP---APALG 118
           A  PG GE   AAAGG G GLG    +G R   + +   AR P   AP++G
Sbjct: 25  APGPGGGEG--AAAGGGGGGLG----SGGRSAQRRAGAGARRPIGAAPSVG 69


>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 28.9 bits (63), Expect = 0.97
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 9/51 (17%)

Query: 71  ARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAP---APALG 118
           A  PG GE   AAAGG G GLG    +G R   + +   AR P   AP++G
Sbjct: 25  APGPGGGEG--AAAGGGGGGLG----SGGRSAQRRAGAGARRPIGAAPSVG 69


>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 28.9 bits (63), Expect = 0.97
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 9/51 (17%)

Query: 71  ARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAP---APALG 118
           A  PG GE   AAAGG G GLG    +G R   + +   AR P   AP++G
Sbjct: 25  APGPGGGEG--AAAGGGGGGLG----SGGRSAQRRAGAGARRPIGAAPSVG 69


>gi|4759160 small nuclear ribonucleoprotein polypeptide D3 [Homo
           sapiens]
          Length = 126

 Score = 28.9 bits (63), Expect = 0.97
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 55  APPGEDLDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRV 96
           AP  + +    + +G  R   A  +A  AA GRGRG+GR  +
Sbjct: 80  APMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGMGRGNI 121


>gi|239755501 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 139

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 8   SSWLWCGNLRPMHMARMAAPQPPSWLLKGILQPL---GLPGFSCMALCTEAPP---GEDL 61
           S++L   N+ P       +P PP+    G  + L   GLPG +   L     P   G  L
Sbjct: 43  STFLSADNVEP-------SPPPPTPTSMGKERGLSWAGLPGLTMCLLQESLAPVLAGASL 95

Query: 62  DWNARATGVARAPGAGEEALAAAGGR 87
            W  R      AP      LAA GG+
Sbjct: 96  SWTGRPLWPGAAPCPAGCCLAAGGGK 121


>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 113

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%)

Query: 61  LDWNARATGVARAPGAGEEALAAAGGRGRGLGRSRVTGFRDCPQISRVAARAPAP 115
           L W  +A   ARAP  G    A   G GRG        +R  P+  R    AP+P
Sbjct: 6   LSWGDQAGERARAPSGGGSGQAQRPGPGRG-------SWRRPPRRQRPGPAAPSP 53


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,159,625
Number of Sequences: 37866
Number of extensions: 318259
Number of successful extensions: 1381
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 1288
Number of HSP's gapped (non-prelim): 159
length of query: 121
length of database: 18,247,518
effective HSP length: 89
effective length of query: 32
effective length of database: 14,877,444
effective search space: 476078208
effective search space used: 476078208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.