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Search of human proteins with 239747673
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
(714 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 1489 0.0
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 976 0.0
gi|239753110 PREDICTED: doublecortin domain-containing protein E... 798 0.0
gi|117938307 doublecortin domain containing 2 [Homo sapiens] 182 7e-46
gi|150456471 doublecortin domain containing 2B [Homo sapiens] 151 2e-36
gi|156713430 doublecortin-like kinase 2 isoform b [Homo sapiens] 78 2e-14
gi|156713428 doublecortin-like kinase 2 isoform a [Homo sapiens] 78 2e-14
gi|30181244 doublecortin isoform c [Homo sapiens] 71 3e-12
gi|30181242 doublecortin isoform b [Homo sapiens] 71 3e-12
gi|30181240 doublecortin isoform c [Homo sapiens] 71 3e-12
gi|30181246 doublecortin isoform a [Homo sapiens] 71 3e-12
gi|4758128 doublecortin-like kinase 1 [Homo sapiens] 71 3e-12
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 65 3e-10
gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens] 62 2e-09
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 54 4e-07
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 50 7e-06
gi|9945318 MAX binding protein [Homo sapiens] 50 9e-06
gi|117938768 GNAS complex locus alex [Homo sapiens] 49 1e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 3e-05
gi|154146199 sal-like 3 [Homo sapiens] 48 3e-05
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 47 5e-05
gi|41281612 zinc finger protein 828 [Homo sapiens] 47 5e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 8e-05
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 47 8e-05
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 47 8e-05
gi|33186895 selenoprotein V [Homo sapiens] 47 8e-05
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 46 1e-04
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 46 1e-04
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 46 1e-04
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 46 1e-04
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 1489 bits (3856), Expect = 0.0
Identities = 714/714 (100%), Positives = 714/714 (100%)
Query: 1 MAVTGGLYGTTFFEHYKILILIISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT 60
MAVTGGLYGTTFFEHYKILILIISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT
Sbjct: 1 MAVTGGLYGTTFFEHYKILILIISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT 60
Query: 61 CLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPV 120
CLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPV
Sbjct: 61 CLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPV 120
Query: 121 PSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTR 180
PSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTR
Sbjct: 121 PSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTR 180
Query: 181 GPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLF 240
GPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLF
Sbjct: 181 GPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLF 240
Query: 241 TPTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINV 300
TPTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINV
Sbjct: 241 TPTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINV 300
Query: 301 PSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLF 360
PSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLF
Sbjct: 301 PSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLF 360
Query: 361 TMNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPRVDSKGKEPCKYDGIPPKTQDSVY 420
TMNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPRVDSKGKEPCKYDGIPPKTQDSVY
Sbjct: 361 TMNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPRVDSKGKEPCKYDGIPPKTQDSVY 420
Query: 421 YAKEEKKKTLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQSWTGWVA 480
YAKEEKKKTLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQSWTGWVA
Sbjct: 421 YAKEEKKKTLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQSWTGWVA 480
Query: 481 ASEWAKPGELARAWLAAWPHSAPGPCCLLGRLLALRQGDWHTHGHREASPMPESFWLAYE 540
ASEWAKPGELARAWLAAWPHSAPGPCCLLGRLLALRQGDWHTHGHREASPMPESFWLAYE
Sbjct: 481 ASEWAKPGELARAWLAAWPHSAPGPCCLLGRLLALRQGDWHTHGHREASPMPESFWLAYE 540
Query: 541 HTEITLVMIRKQEAPGPPSVGYLSGCVDGTPPGQLDACAAPTPHLLFLCSQETGGAGASI 600
HTEITLVMIRKQEAPGPPSVGYLSGCVDGTPPGQLDACAAPTPHLLFLCSQETGGAGASI
Sbjct: 541 HTEITLVMIRKQEAPGPPSVGYLSGCVDGTPPGQLDACAAPTPHLLFLCSQETGGAGASI 600
Query: 601 SGFPEWLCGRDSSRPAAMHVQHAYLRQAEIVKEDEEIHENTPDFEGNKSSRLVVKGSEIT 660
SGFPEWLCGRDSSRPAAMHVQHAYLRQAEIVKEDEEIHENTPDFEGNKSSRLVVKGSEIT
Sbjct: 601 SGFPEWLCGRDSSRPAAMHVQHAYLRQAEIVKEDEEIHENTPDFEGNKSSRLVVKGSEIT 660
Query: 661 SRFQNTSQHGIGSECISQAAVDTIGFPVPVNYMSHFNHIYTCPNYFPLYFQSQT 714
SRFQNTSQHGIGSECISQAAVDTIGFPVPVNYMSHFNHIYTCPNYFPLYFQSQT
Sbjct: 661 SRFQNTSQHGIGSECISQAAVDTIGFPVPVNYMSHFNHIYTCPNYFPLYFQSQT 714
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 976 bits (2522), Expect = 0.0
Identities = 473/474 (99%), Positives = 474/474 (100%)
Query: 1 MAVTGGLYGTTFFEHYKILILIISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT 60
MAVTGGLYGTTFFEHYKILILIISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT
Sbjct: 1 MAVTGGLYGTTFFEHYKILILIISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT 60
Query: 61 CLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPV 120
CLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPV
Sbjct: 61 CLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPV 120
Query: 121 PSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTR 180
PSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTR
Sbjct: 121 PSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTR 180
Query: 181 GPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLF 240
GPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLF
Sbjct: 181 GPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLF 240
Query: 241 TPTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINV 300
TPTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINV
Sbjct: 241 TPTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINV 300
Query: 301 PSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLF 360
PSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLF
Sbjct: 301 PSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLF 360
Query: 361 TMNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPRVDSKGKEPCKYDGIPPKTQDSVY 420
TMNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPRVDSKGKEPCKYDGIPPKTQDSVY
Sbjct: 361 TMNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPRVDSKGKEPCKYDGIPPKTQDSVY 420
Query: 421 YAKEEKKKTLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQS 474
YAKEEKKKTLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQ+
Sbjct: 421 YAKEEKKKTLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQA 474
>gi|239753110 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 530
Score = 798 bits (2061), Expect = 0.0
Identities = 395/461 (85%), Positives = 397/461 (86%), Gaps = 53/461 (11%)
Query: 122 SPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRG 181
+P P PSP A GWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRG
Sbjct: 16 APHLPGLPVAPSPVSALGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRG 75
Query: 182 PSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLFT 241
PSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLFT
Sbjct: 76 PSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLFT 135
Query: 242 PTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINVP 301
PTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINVP
Sbjct: 136 PTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVHCDINVP 195
Query: 302 SKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLFT 361
SKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLFT
Sbjct: 196 SKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKVFPLGGVRKLFT 255
Query: 362 MNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPR------------------------ 397
MNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPR
Sbjct: 256 MNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPRVPSEVQHVSGVKSYLFHSLTEHSP 315
Query: 398 -----------------------------VDSKGKEPCKYDGIPPKTQDSVYYAKEEKKK 428
VDSKGKEPCKYDGIPPKTQDSVYYAKEEKKK
Sbjct: 316 RRQAPSPFYRTSERPETTQLTWRARDPVLVDSKGKEPCKYDGIPPKTQDSVYYAKEEKKK 375
Query: 429 TLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQSWTGWVAASEWAKPG 488
TLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQSWTGWVAASEWAKPG
Sbjct: 376 TLAEPLVQRGAEGDVYKAPTPSKETQGALDVKEEHNVQLEVPVDQSWTGWVAASEWAKPG 435
Query: 489 ELARAWLAAWPHSAPGPCCLLGRLLALRQGDWHTHGHREAS 529
ELARAWLAAWPHSAPGPCCLLGRLLALRQGDWHTHGHRE +
Sbjct: 436 ELARAWLAAWPHSAPGPCCLLGRLLALRQGDWHTHGHREGA 476
>gi|117938307 doublecortin domain containing 2 [Homo sapiens]
Length = 476
Score = 182 bits (463), Expect = 7e-46
Identities = 128/410 (31%), Positives = 204/410 (49%), Gaps = 60/410 (14%)
Query: 178 GTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFG-V 236
G+ S+ + K+++VYRNGDPFY G++ V+ ++ ++FE L+++T V PFG V
Sbjct: 3 GSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVTGGVQAPFGAV 62
Query: 237 RRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDYIHI--VPRKPAKIRKLKEIKPVV 294
R ++TP GHR+ LD +Q+GG YVA G+E FK+L+Y+ I + ++P ++ E+KPV+
Sbjct: 63 RNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVN-TEVKPVI 121
Query: 295 HCDINVPSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKV-FPL 353
H INV ++++ + I + NG L P ++++IP+ +L+ WD VL + EK+
Sbjct: 122 HSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLRS 181
Query: 354 GGVRKLFTMNGHLLGDSKDLQDNHFYVAVGLETFKYFPYWKSPRVDSKGKEPC--KYDGI 411
G V +L+T+ G L+ +L++ FYVAVG + FK PY + S + P K +
Sbjct: 182 GAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYSELLFDKSTMRRPFGQKASSL 241
Query: 412 PP-------KTQDSVYYAKE---EKKKTLAEPLVQRGAEGDV------------------ 443
PP K + ++K + +PL ++G + DV
Sbjct: 242 PPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKEDVNSEKLTKLKQNVKLKNSQ 301
Query: 444 ----------YKAPTPSKETQGALDVKEEHNVQLEVPVDQSWTGWVAASEWAKPGELARA 493
+KA ET+GA +V+E+ + Q+EVPVDQ V E GE A
Sbjct: 302 ETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEE---DGEKANK 358
Query: 494 WLAAWPHSAPGPCCLLGRLLALRQGDWHTHGHREASPMPESFWLAYEHTE 543
A G GD G REA+ PE +H+E
Sbjct: 359 -DAEQKEDFSG-----------MNGDLEEEGGREATDAPEQVEEILDHSE 396
>gi|150456471 doublecortin domain containing 2B [Homo sapiens]
Length = 349
Score = 151 bits (381), Expect = 2e-36
Identities = 113/319 (35%), Positives = 156/319 (48%), Gaps = 44/319 (13%)
Query: 191 AKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLFTPTRGHRVLG 250
AK +VVYRNGDPF+ G + V+++RR T EA L ++T V P VR L+TP GH V
Sbjct: 8 AKRVVVYRNGDPFFPGSQLVVTQRRFPTMEAFLCEVTSAVQAPLAVRALYTPCHGHPVTN 67
Query: 251 LDALQAGGKYVAAGRERFKELDYIHIVPRKPAKIRKLKEIKPVVH--CDINVPSKWQTYH 308
L L+ G+YVAAG ERF +L Y+ + P + PV CD + Q
Sbjct: 68 LADLKNRGQYVAAGFERFHKLHYLPHRGKDPGGKSCRLQGPPVTRHLCDGAIGR--QLPA 125
Query: 309 RISRHINVFTNGRLFIPPAKIIIPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLL 367
+I+VF NG L PP + + + + DW+ VL + EKV G V KL T+ G L
Sbjct: 126 GAPSYIHVFRNGDLVSPPFSLKLSQAASQDWETVLKLLTEKVKLQSGAVCKLCTLEGLPL 185
Query: 368 GDSKDLQDNHFYVAVGLETFKYFPY--------------WKSPRVDSKG----------- 402
K+L H+YVAVG + FK PY W+ P S+
Sbjct: 186 SAGKELVTGHYYVAVGEDEFKDLPYLELLVPSPSLPRGCWQPPGSKSRPHRQGAQGHRAQ 245
Query: 403 -KEPCKYDGIPPKTQDSVYYAKEE-------KKKTLAEPLVQRGAEGDVYKAPTPSKETQ 454
+P + P + + S +YA+ + K TL+ P G G VY AP KET
Sbjct: 246 VTQPSPKE--PDRIKPSAFYARPQQTIQPRSKLPTLSFP---SGVIG-VYGAPHRRKETA 299
Query: 455 GALDVKEEHNVQLEVPVDQ 473
GAL+V ++ + Q E P+DQ
Sbjct: 300 GALEVADDEDTQTEEPLDQ 318
>gi|156713430 doublecortin-like kinase 2 isoform b [Homo sapiens]
Length = 765
Score = 78.2 bits (191), Expect = 2e-14
Identities = 81/294 (27%), Positives = 124/294 (42%), Gaps = 29/294 (9%)
Query: 107 VASTRSLR----PPGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRC 162
+ASTRS+ P P S R P S S S SGP G
Sbjct: 1 MASTRSIELEHFEERDKRPRPGSRRGAP--SSSGGSSSSGPKGNGL-------------- 44
Query: 163 RSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEAL 222
+ +PA + TR A AK YRNGD ++ G F +S R +F+AL
Sbjct: 45 --IPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDAL 102
Query: 223 LEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDYI-HIV 277
L +LT + V++P GVR ++T +V LD L G YV A E F+++DY +I
Sbjct: 103 LIELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNIN 162
Query: 278 PRKPAKIRKLKEIKPVVHCDINVPSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLS 337
P I+ + K + + V +G +I++ K +
Sbjct: 163 PNWSVNIKGGTSRALAAASSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAH 222
Query: 338 DWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFKY 389
++ VL I E + G V++L T++G + +D D+ ++A G E F+Y
Sbjct: 223 SFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRY 276
Score = 31.2 bits (69), Expect = 3.5
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 90 PGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPR-PVPVPSPSCASG 139
PG EP+ SP S + PG VP+P+ P P P P P+ G
Sbjct: 712 PGMEPI--------SPVPPSVEEIPVPGEAVPAPTPPESPTPHPPPAAPGG 754
>gi|156713428 doublecortin-like kinase 2 isoform a [Homo sapiens]
Length = 766
Score = 78.2 bits (191), Expect = 2e-14
Identities = 81/294 (27%), Positives = 124/294 (42%), Gaps = 29/294 (9%)
Query: 107 VASTRSLR----PPGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRC 162
+ASTRS+ P P S R P S S S SGP G
Sbjct: 1 MASTRSIELEHFEERDKRPRPGSRRGAP--SSSGGSSSSGPKGNGL-------------- 44
Query: 163 RSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEAL 222
+ +PA + TR A AK YRNGD ++ G F +S R +F+AL
Sbjct: 45 --IPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDAL 102
Query: 223 LEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDYI-HIV 277
L +LT + V++P GVR ++T +V LD L G YV A E F+++DY +I
Sbjct: 103 LIELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNIN 162
Query: 278 PRKPAKIRKLKEIKPVVHCDINVPSKWQTYHRISRHINVFTNGRLFIPPAKIIIPKFSLS 337
P I+ + K + + V +G +I++ K +
Sbjct: 163 PNWSVNIKGGTSRALAAASSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAH 222
Query: 338 DWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFKY 389
++ VL I E + G V++L T++G + +D D+ ++A G E F+Y
Sbjct: 223 SFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRY 276
Score = 31.2 bits (69), Expect = 3.5
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 90 PGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPR-PVPVPSPSCASG 139
PG EP+ SP S + PG VP+P+ P P P P P+ G
Sbjct: 713 PGMEPI--------SPVPPSVEEIPVPGEAVPAPTPPESPTPHPPPAAPGG 755
>gi|30181244 doublecortin isoform c [Homo sapiens]
Length = 360
Score = 71.2 bits (173), Expect = 3e-12
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 158 RCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAA 217
R R L +P + TR A + AK + YRNGD ++ G + +S R
Sbjct: 19 RGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFR 78
Query: 218 TFEALLEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDY 273
+F+ALL LT + +++P GVR ++T ++ +D L+ G YV + FK+++Y
Sbjct: 79 SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138
Query: 274 I-HIVPRKPAKIRKLKEIK-PVVHCDINVPSKWQTYHRI-SRHINVFTNGRLFIPPAKII 330
++ P ++ +K P N + + + + + +G +++
Sbjct: 139 TKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRSGVKPRKAVRVL 198
Query: 331 IPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFK 388
+ K + ++ VL I E + G V+KL+T++G + D D+ ++A G E F+
Sbjct: 199 LNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 258
Query: 389 Y 389
Y
Sbjct: 259 Y 259
>gi|30181242 doublecortin isoform b [Homo sapiens]
Length = 365
Score = 71.2 bits (173), Expect = 3e-12
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 158 RCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAA 217
R R L +P + TR A + AK + YRNGD ++ G + +S R
Sbjct: 19 RGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFR 78
Query: 218 TFEALLEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDY 273
+F+ALL LT + +++P GVR ++T ++ +D L+ G YV + FK+++Y
Sbjct: 79 SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138
Query: 274 I-HIVPRKPAKIRKLKEIK-PVVHCDINVPSKWQTYHRI-SRHINVFTNGRLFIPPAKII 330
++ P ++ +K P N + + + + + +G +++
Sbjct: 139 TKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRSGVKPRKAVRVL 198
Query: 331 IPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFK 388
+ K + ++ VL I E + G V+KL+T++G + D D+ ++A G E F+
Sbjct: 199 LNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 258
Query: 389 Y 389
Y
Sbjct: 259 Y 259
>gi|30181240 doublecortin isoform c [Homo sapiens]
Length = 360
Score = 71.2 bits (173), Expect = 3e-12
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 158 RCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAA 217
R R L +P + TR A + AK + YRNGD ++ G + +S R
Sbjct: 19 RGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFR 78
Query: 218 TFEALLEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDY 273
+F+ALL LT + +++P GVR ++T ++ +D L+ G YV + FK+++Y
Sbjct: 79 SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138
Query: 274 I-HIVPRKPAKIRKLKEIK-PVVHCDINVPSKWQTYHRI-SRHINVFTNGRLFIPPAKII 330
++ P ++ +K P N + + + + + +G +++
Sbjct: 139 TKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRSGVKPRKAVRVL 198
Query: 331 IPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFK 388
+ K + ++ VL I E + G V+KL+T++G + D D+ ++A G E F+
Sbjct: 199 LNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 258
Query: 389 Y 389
Y
Sbjct: 259 Y 259
>gi|30181246 doublecortin isoform a [Homo sapiens]
Length = 441
Score = 71.2 bits (173), Expect = 3e-12
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 158 RCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAA 217
R R L +P + TR A + AK + YRNGD ++ G + +S R
Sbjct: 100 RGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFR 159
Query: 218 TFEALLEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDY 273
+F+ALL LT + +++P GVR ++T ++ +D L+ G YV + FK+++Y
Sbjct: 160 SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 219
Query: 274 I-HIVPRKPAKIRKLKEIK-PVVHCDINVPSKWQTYHRI-SRHINVFTNGRLFIPPAKII 330
++ P ++ +K P N + + + + + +G +++
Sbjct: 220 TKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRSGVKPRKAVRVL 279
Query: 331 IPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFK 388
+ K + ++ VL I E + G V+KL+T++G + D D+ ++A G E F+
Sbjct: 280 LNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 339
Query: 389 Y 389
Y
Sbjct: 340 Y 340
>gi|4758128 doublecortin-like kinase 1 [Homo sapiens]
Length = 729
Score = 71.2 bits (173), Expect = 3e-12
Identities = 76/319 (23%), Positives = 136/319 (42%), Gaps = 19/319 (5%)
Query: 158 RCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAA 217
R R L +P + TR AK + YRNGD ++ G + +S R
Sbjct: 23 RGSRVNGLPSPTHSAHCSFYRTRTLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFR 82
Query: 218 TFEALLEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDY 273
+FEALL LT + V++P GVR ++T ++ LD L G YV E FK+L+Y
Sbjct: 83 SFEALLADLTRTLSDNVNLPQGVRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEY 142
Query: 274 I-HIVPRKPAKIRKLKEIKPV--VHCDINVPSKWQTYHRISRH--INVFTNGRLFIPPAK 328
++ P ++ + V + PS+ + R + + +G +
Sbjct: 143 TKNVNPNWSVNVKTTSASRAVSSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVR 202
Query: 329 IIIPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLET 386
I++ K + ++ VL I + + G V++L+T++G + +D D+ ++A G E
Sbjct: 203 ILLNKKTAHSFEQVLTDITDAIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEK 262
Query: 387 FKYFPYWKSPRVDSKGKEPCKYDGIPPKTQDSVYYA--KEEKKKTLAEPLVQRGAEGDVY 444
F+Y + + + + Y I ++ S + + K+ A G G
Sbjct: 263 FRYQDDFLLDESECRVVKSTSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQL 322
Query: 445 ------KAPTPSKETQGAL 457
K+P+PS + G+L
Sbjct: 323 STPRSGKSPSPSPTSPGSL 341
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 64.7 bits (156), Expect = 3e-10
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 163 RSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEAL 222
R+ AP+ E R PS TPAK I + GDP + G + + +R TF AL
Sbjct: 6 RNAQAPSHRECFLPSVARTPSV-TKVTPAKKITFLKRGDPRFAGVRLAVHQRAFKTFSAL 64
Query: 223 LEQLTEQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRE 266
+++L+++V + FGVR + TP H + L+ L+ GG Y+ + ++
Sbjct: 65 MDELSQRVPLSFGVRSVTTPRGLHSLSALEQLEDGGCYLCSDKK 108
Score = 37.0 bits (84), Expect = 0.064
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 40 PSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRA-ACSPARVPRRPVSCPGPEPLALA 98
P+P R CP R + GS +H S R SP R+P P P P + A
Sbjct: 854 PTPPRGRPCPQR------RSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGA 907
Query: 99 ARRSQSPRVASTRSLR----------PPGSPVPSPSSPRPVPVPSP 134
+RRS + + A +R L P G S SP +P SP
Sbjct: 908 SRRSSASQGAGSRGLSEEKTLRSGGGPQGQEEASGVSPSSLPRSSP 953
>gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens]
Length = 2156
Score = 61.6 bits (148), Expect = 2e-09
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 191 AKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLFTPTRGHRVLG 250
AK I Y++GDP + G + V++ R +F+ALL+ L+ +V +PFGVR + TP H +
Sbjct: 35 AKRISFYKSGDPQFGGVRVVVNPRSFKSFDALLDNLSRKVPLPFGVRNISTPRGRHSITR 94
Query: 251 LDALQAGGKYVAAGRERFK--ELDYIHIVPRKPAKIRKLKEIKPVVHCDINVPSKWQTYH 308
L+ L+ G Y+ + + + +LD PR R + P + P
Sbjct: 95 LEELEDGESYLCSHGRKVQPVDLDKARRRPRPWLSSRAISAHSPPHPVAVAAPG----MP 150
Query: 309 RISRHINVFTNG 320
R R + VF NG
Sbjct: 151 RPPRSLVVFRNG 162
Score = 56.6 bits (135), Expect = 8e-08
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 183 SAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAATFEALLEQLTEQVDVPFGVRRLFTP 242
+AP P +++VV+RNGDP + +LSRR +FEA L+ LTE + P V +L+
Sbjct: 145 AAPGMPRPPRSLVVFRNGDP-KTRRAVLLSRRVTQSFEAFLQHLTEVMQRP--VVKLYA- 200
Query: 243 TRGHRVLGLDA-LQAGGKYVAAGRERFKELDY 273
T G RV L A + + G VAAGRE FK +Y
Sbjct: 201 TDGRRVPSLQAVILSSGAVVAAGREPFKPGNY 232
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 54.3 bits (129), Expect = 4e-07
Identities = 49/168 (29%), Positives = 66/168 (39%), Gaps = 22/168 (13%)
Query: 35 PLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEP 94
P PP PS P + +P+P L + + +H S P +A + P P
Sbjct: 433 PRPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASARTSTHKP----------P 482
Query: 95 LALAARRSQSPRVASTRSLRPPGSPVP---SPSSPRPVP-VPSPSCASGWSGPPVGGARA 150
A S +P STRS RPP + VP S+PR P VP+P A S P+ G+ A
Sbjct: 483 PFTALSSSPAPTPGSTRSTRPPATMVPPTSGTSTPRTAPAVPTPGSAPTGSKKPI-GSEA 541
Query: 151 WARLCRRRCPRCRSLSAPASEERGAAM-------GTRGPSAPVDTTPA 191
+ + PR P R + R P TTPA
Sbjct: 542 SKKAGPKSSPRKPVPLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPA 589
Score = 35.8 bits (81), Expect = 0.14
Identities = 45/176 (25%), Positives = 67/176 (38%), Gaps = 33/176 (18%)
Query: 28 PSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRA---ACSPARVPR 84
PS ++ P+ P + P P T + P+ SP P + P + + P +
Sbjct: 355 PSQKITATKIPKSLPTK-PSAPSTSIVPIK------SPHPTQKTAPSSFTKSALPTQKQV 407
Query: 85 RPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P S P P A +R ++ P R PG P P P S RP+P P+ +S P
Sbjct: 408 PPTSRPVP---ARVSRPAEKP------IQRNPGMPRPPPPSTRPLP---PTTSSSKKPIP 455
Query: 145 V-----------GGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTT 189
A AR + P +LS+ + G+ TR P+ V T
Sbjct: 456 TLARTEAKITSHASKPASARTSTHKPPPFTALSSSPAPTPGSTRSTRPPATMVPPT 511
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 50.1 bits (118), Expect = 7e-06
Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 24/171 (14%)
Query: 29 SVWTSSPLPPRPSPARAPRCPLTCL-RPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPV 87
S+ ++SP+P P+P AP T L PVP SPLP+ S A +PA P
Sbjct: 1641 SLASASPVPA-PTPVLAPSSTQTMLPAPVP------SPLPSPASTQTLALAPALAPTLGG 1693
Query: 88 SCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPS-----SPRPVPVPSPSCASGWSG 142
S P + L+L Q P T SL P S VP+P+ +P P P+ + + +
Sbjct: 1694 SSPS-QTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAP 1752
Query: 143 P-----PVGGARAWARLCRRRCPRCRSLSAPASEE----RGAAMGTRGPSA 184
P PVG A A L SL APAS + A + T GP+A
Sbjct: 1753 PLAPASPVGPAPAHT-LTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAA 1802
Score = 43.9 bits (102), Expect = 5e-04
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 7/175 (4%)
Query: 23 ISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARV 82
+S S P + P P+ P P + P+P + L SP+ + +S+P ++ P V
Sbjct: 1385 VSASAPGAAPLTISSPLHVPSSLPG-PASSPMPIPNSSPLASPVSSTVSVPLSSSLPISV 1443
Query: 83 PR---RPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASG 139
P P S P P++ S S T S+ PP +PV P++P P P +PS AS
Sbjct: 1444 PTTLPAPASAPLTIPISAPLTVSASGPALLT-SVTPPLAPV-VPAAPGP-PSLAPSGASP 1500
Query: 140 WSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTI 194
+ G L + P L AP S T P+ PA +
Sbjct: 1501 SASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASAL 1555
Score = 39.3 bits (90), Expect = 0.013
Identities = 43/117 (36%), Positives = 49/117 (41%), Gaps = 28/117 (23%)
Query: 33 SSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCP-- 90
S+ PPR SPAR R P RP PR P P S P A PA VP PVS P
Sbjct: 2422 STTTPPRCSPARE-RVP----RPAPR------PRPTPASAPAAI--PALVPV-PVSAPVP 2467
Query: 91 --GPEPLA-LAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P P+ L SP PP S +P SSP P P+ + + PP
Sbjct: 2468 ISAPNPITILPVHILPSP---------PPPSQIPPCSSPACTPPPACTPPPAHTPPP 2515
Score = 38.5 bits (88), Expect = 0.022
Identities = 47/194 (24%), Positives = 75/194 (38%), Gaps = 39/194 (20%)
Query: 25 ISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT-CLGSPLPNHLSLPRAACSPARVP 83
+ VP+ +SP P P+PA A + L P + L +PL +P P
Sbjct: 1548 VLVPASALASPFPSAPNPAPAQA---SLLAPASSASQALATPL-----------APMAAP 1593
Query: 84 RRPVSCPGPEPL-----ALAARRSQSPRVASTRS----LRPPGSPVPSPSSPRPVPVPSP 134
+ + P P P LA +P +AS+++ + P +P S +S PVP P+P
Sbjct: 1594 QTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTP 1653
Query: 135 SCASGWS--------GPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPV 186
A + P+ + L P +S + ++GT P P
Sbjct: 1654 VLAPSSTQTMLPAPVPSPLPSPASTQTLA--LAPALAPTLGGSSPSQTLSLGTGNPQGPF 1711
Query: 187 DT-----TPAKTIV 195
T TPA ++V
Sbjct: 1712 PTQTLSLTPASSLV 1725
Score = 35.8 bits (81), Expect = 0.14
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 16 YKILILIISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRA 75
+ +L+ S VP + +S + P SP P L P P +P P SL
Sbjct: 1523 HPLLLAPTSSHVPGL--NSTVAPACSPVLVPASALAS--PFPSAP---NPAPAQASLLAP 1575
Query: 76 ACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRP-PGSPVPSPSSPRPVPVPSP 134
A S ++ P++ P P S +P +A L P PG+ SS PVPV +P
Sbjct: 1576 ASSASQALATPLA-PMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAP 1634
Query: 135 SCASGWS 141
S G S
Sbjct: 1635 SSTPGTS 1641
Score = 35.4 bits (80), Expect = 0.19
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 43 ARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLAL--AAR 100
A AP T + +P T +P P LSLP AA +VP V+ G + + A R
Sbjct: 1262 AVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAA---NQVPPTMVNNTGVVKIVVRQAPR 1318
Query: 101 RSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCP 160
+P + RPP S +P+ +PRP P P +G ARA P
Sbjct: 1319 DGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTP-----GRLPTPTLGTARAPMPTPTLVRP 1373
Query: 161 RCRSLSAPASEERGAAMG 178
+ + +P+ E +A G
Sbjct: 1374 LLKLVHSPSPEVSASAPG 1391
Score = 33.9 bits (76), Expect = 0.54
Identities = 43/171 (25%), Positives = 63/171 (36%), Gaps = 25/171 (14%)
Query: 29 SVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVS 88
S+ T +P P P+ + P + L P P T +P P + +PA P P S
Sbjct: 1701 SLGTGNPQGPFPTQTLS-LTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAP-PLAPAS 1758
Query: 89 CPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGA 148
GP P A +S+ SL P S SP PVP P+ A + P
Sbjct: 1759 PVGPAP----AHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPA--- 1811
Query: 149 RAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRN 199
S +PAS+ + G +AP+ T + V ++
Sbjct: 1812 ---------------STQSPASQASSLVVSASG-AAPLPVTMVSRLPVSKD 1846
Score = 30.0 bits (66), Expect = 7.8
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 27/111 (24%)
Query: 90 PGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGAR 149
PGPE L +A L P P P P P+PV P+P + PV R
Sbjct: 2896 PGPETLIVA-----------DPVLEPQLIPGPQPLGPQPVHRPNPLLS------PVEKRR 2938
Query: 150 AWARLCRRRCPRCRSLSAP----ASEERGAAMGTRGPSAPVDTTPAKTIVV 196
R R P+ R L P ++ + + T+ P P TP ++V
Sbjct: 2939 ------RGRPPKARDLPIPGTISSAGDGNSESRTQPPPHPSPLTPLPPLLV 2983
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 49.7 bits (117), Expect = 9e-06
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 37 PPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRP--VSCPG--- 91
PP P P A PLT + P+P +T PLP LP AA PR+P V PG
Sbjct: 73 PPAPPPPLATPAPLTVI-PIPVVTNSPQPLPPPPPLPAAAQPLPLAPRQPALVGAPGLSI 131
Query: 92 PEPLALAARRSQSPRVASTRSLRPPG-SPVPSPSSPRPV-PVPSP 134
EP L +R P+V + L P + +P SP+P+ P+P+P
Sbjct: 132 KEPAPLPSR----PQVPTPAPLLPDSKATIPPNGSPKPLQPLPTP 172
Score = 30.8 bits (68), Expect = 4.6
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Query: 57 PRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLALAARRSQSP-RVASTRSLRP 115
P+L+ P +LP + +PA +P P P P ++A + P + + P
Sbjct: 353 PKLSHRPQPELLKSTLPPPSTTPAPLPPHP----HPHPHSVALPPAHLPVQQQQPQQKTP 408
Query: 116 PGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGA 175
+P P P++P VP+P+ +G GG+ A ++++ G
Sbjct: 409 LPAPPPPPAAPAQTLVPAPAHLVATAG---GGSTVIAHTATTHASVIQTVNHVLQGPGGK 465
Query: 176 AMGTRGPSAP 185
+ PSAP
Sbjct: 466 HIAHIAPSAP 475
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 49.3 bits (116), Expect = 1e-05
Identities = 58/182 (31%), Positives = 78/182 (42%), Gaps = 29/182 (15%)
Query: 20 ILIISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSP 79
IL S P PLPP+P P P PLT P P P P P+ P
Sbjct: 357 ILTPGHSQPIPTPGQPLPPQPIP--TPGRPLT---PQP------IPTPGRPLTPQ----P 401
Query: 80 ARVPRRPVSCPGPEPLALAARRSQSPRVASTRS------LRPPGSPVPSPSSPRPV-PVP 132
++P RP+ P P L L + SP++ T+ L PPG P S+ RP+ P+P
Sbjct: 402 IQMPGRPLRLPPPLRL-LRPGQPMSPQLRQTQGLPLPQPLLPPGQP---KSAGRPLQPLP 457
Query: 133 SPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRG-PSAPVDTTPA 191
A S PP +R RL R R ++P + A +G P+A + TPA
Sbjct: 458 PGPDARSISDPPAPRSRLPIRLLRGLLARLPGGASPRAAAAAACTTMKGWPAATM--TPA 515
Query: 192 KT 193
+T
Sbjct: 516 ET 517
Score = 33.9 bits (76), Expect = 0.54
Identities = 37/143 (25%), Positives = 50/143 (34%), Gaps = 37/143 (25%)
Query: 24 SISVPSVWTS--SPLPPRPS-----------------------------PARAPRCPLTC 52
S ++PS WT+ S L RPS P R + PL
Sbjct: 256 STTLPSTWTAPQSRLTARPSRSPEPQIRESEQRDPQLRRKQQRWKEPLMPRREEKYPLRG 315
Query: 53 LRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRS 112
P+P PLP P+ +P + + P PG L SQ T
Sbjct: 316 TDPLPPGQPQRIPLPGQPLQPQPILTPGQPQKIPT--PGQHQPILTPGHSQP---IPTPG 370
Query: 113 LRPPGSPVPSPSSP-RPVPVPSP 134
P P+P+P P P P+P+P
Sbjct: 371 QPLPPQPIPTPGRPLTPQPIPTP 393
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 48.1 bits (113), Expect = 3e-05
Identities = 40/122 (32%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 28 PSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPV 87
P +S PP +P PL L P P L+ L +P P + P A P + P P
Sbjct: 581 PETPSSIATPPPQAPPALASPPLQGL-PSPPLSPLATPPPQ--APPXLALPPLQAPPSPP 637
Query: 88 SCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPS-----SPRPVPVPSPSCASGWSG 142
+ P PLA + Q+P + L+ P SP PSP SP P SPS
Sbjct: 638 ASPPLSPLATPS--PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQA 695
Query: 143 PP 144
PP
Sbjct: 696 PP 697
Score = 42.4 bits (98), Expect = 0.002
Identities = 51/147 (34%), Positives = 61/147 (41%), Gaps = 30/147 (20%)
Query: 27 VPSVWTSSPL--PPRPSPARAPRCPLTCLRP-------VPRLTCLGSPLPNHLSLP-RAA 76
VP + + PL PP P PA P PL P P L L SP S P +A
Sbjct: 757 VPPLLAAPPLQVPPSP-PASLPMSPLAKPPPQAPPALATPPLQALPSP---PASFPGQAP 812
Query: 77 CSP-ARVPRRPVSCPGPE-PLALAARRSQSPRV--ASTRSLRPPGSPVPSPSS------- 125
SP A +P P++ P P+ P LAA Q P AS P P P P +
Sbjct: 813 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 872
Query: 126 -----PRPVPVPSPSCASGWSGPPVGG 147
P P P PS S +S SGP + G
Sbjct: 873 TLALAPGPPPPPSRSPSSTLSGPDLAG 899
Score = 41.6 bits (96), Expect = 0.003
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 28 PSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPL--PNHLSLPRAACSPAR-VPR 84
P + S+ PPR P A P + P P + SPL P + P A P + +P
Sbjct: 745 PPMSPSATPPPRVPPLLA--APPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPS 802
Query: 85 RPVSCPGPEPLA---------LAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPS 135
P S PG P + LA Q+P V + L+ P SP SP+ P P+P
Sbjct: 803 PPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG 862
Query: 136 CASGWSGP 143
+ SGP
Sbjct: 863 PDTSVSGP 870
Score = 41.6 bits (96), Expect = 0.003
Identities = 53/178 (29%), Positives = 68/178 (38%), Gaps = 36/178 (20%)
Query: 35 PLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPA-------RVPRRPV 87
P PP P +AP P L P+ L P L+ P P+ + PRRP
Sbjct: 801 PSPPASFPGQAPFSPSASL-PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 859
Query: 88 SCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVP---------VPSPSCAS 138
+ PGP+ PR+ + PP P SPSS P +P
Sbjct: 860 T-PGPDTSV------SGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 912
Query: 139 GWSGPPVGGARAWARLCRRRCPRCRSLSA--PASEERGAA--MGTRG-PSAPVDTTPA 191
G+ P GGA A P L+A PA+ RG A + RG P AP+ PA
Sbjct: 913 GYDSGPEGGAAA-------SPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPA 963
Score = 40.0 bits (92), Expect = 0.008
Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 19/135 (14%)
Query: 24 SISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPR-LTCLGSP------------LPNHL 70
S+S + SSP PS PR P +P P+ L L P L
Sbjct: 241 SLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLS 300
Query: 71 SLPRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPV- 129
S P A SP+ RPV P L A SP +A+ L P PSPS+P +
Sbjct: 301 SSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAP-----PSPSAPPSLQ 355
Query: 130 PVPSPSCASGWSGPP 144
+PSP PP
Sbjct: 356 TLPSPPATPPSQAPP 370
Score = 40.0 bits (92), Expect = 0.008
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 33 SSPLPPRPSPA------RAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRP 86
SSPL P A +P+ PL+ L +P L S P L P A+ + + P
Sbjct: 481 SSPLTIHPLQALSSLASHSPQAPLSSLI-MPPLETQSSLAPPSLQTPPASLTTPPLENLP 539
Query: 87 VSCPGPEPLA---LAARRSQSPRVASTRSLRPPGSPV--PSPSSPRPVPVPSPSCASGWS 141
P P A L ++P + L+ P SP+ P P +P + P P +
Sbjct: 540 SLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALA 599
Query: 142 GPPVGG 147
PP+ G
Sbjct: 600 SPPLQG 605
Score = 40.0 bits (92), Expect = 0.008
Identities = 35/114 (30%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 34 SPLPPRPSP-ARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGP 92
+P P PSP +AP P P T P + P A P +VP P + P
Sbjct: 663 APFSPPPSPPVQAPFSPPASPPVSPSAT------PPSQAPPSLAAPPLQVPPSPPASPPM 716
Query: 93 EPLALAARRSQSPRVASTRSL--RPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P A ++ P A + PP SP SPS+ P VP A PP
Sbjct: 717 SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPP 770
Score = 39.7 bits (91), Expect = 0.010
Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 14/118 (11%)
Query: 36 LPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLS--LPRAACSPARVP--RRPVSCPG 91
LPP +P P P P+ L PN L+ L +A SP P + P S P
Sbjct: 627 LPPLQAPPSPPASP-----PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 681
Query: 92 PEPLALAARR-SQSPRVASTRSLR----PPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P++ +A SQ+P + L+ PP SP SPS+ P P P A PP
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP 739
Score = 39.3 bits (90), Expect = 0.013
Identities = 39/124 (31%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 26 SVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPR-LTCLGSPLPNHLSLPRAACSPARVPR 84
SV S S P P+ R P RP R L+ +PL S R+ S PR
Sbjct: 208 SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS---SPARSGPSARGTPR 264
Query: 85 RPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P P+P L A R P+V R +P P S P+ PSPS PP
Sbjct: 265 APAHPSQPKPKGLQALRP--PQVTPPRK---DAAPALGPLSSSPLATPSPSGTKARPVPP 319
Query: 145 VGGA 148
A
Sbjct: 320 PDNA 323
Score = 38.1 bits (87), Expect = 0.029
Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 24 SISVPSVWTSSPLPP---RPSPARAPRCPLTCLRPV--PRLTCLGSPLPN-HLSLPRA-A 76
S+ +P + T S L P + PA PL L + P L +PL HL P A
Sbjct: 506 SLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPA 565
Query: 77 CSPARVPRRPVSCPGPE-PLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPS 135
P + P P++ P PE P ++A Q+P ++ L+ SP SP + P P
Sbjct: 566 PCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXL 625
Query: 136 CASGWSGPP 144
PP
Sbjct: 626 ALPPLQAPP 634
Score = 37.7 bits (86), Expect = 0.037
Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 10/101 (9%)
Query: 34 SPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPE 93
+P P P P +AP PLT P P+ ++ P PA P P
Sbjct: 560 TPPCPAPCPLQAPPSPLTTPPP---------ETPSSIATPPPQAPPALASPPLQGLPSPP 610
Query: 94 PLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSP 134
LA Q+P + L+ P SP SP P+ PSP
Sbjct: 611 LSPLATPPPQAPPXLALPPLQAPPSPPASPPL-SPLATPSP 650
Score = 35.8 bits (81), Expect = 0.14
Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Query: 32 TSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPG 91
TS P P PSPA A R T +G P P + PR P PR+ VS
Sbjct: 164 TSGPTPGTPSPAMARRSRAAG-------TEVGLPRPAPSARPR---PPTEGPRKSVSSAS 213
Query: 92 ----PEPLALAARRSQSP---RVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
EP A RR + + ++RSL +P+ SP+ P +P + S P
Sbjct: 214 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 273
Query: 145 VGGARA 150
G +A
Sbjct: 274 PKGLQA 279
Score = 33.9 bits (76), Expect = 0.54
Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 15/169 (8%)
Query: 28 PSVWTSSPLPPRPSPARAPRCPLT--CLRPVPRLTCLG-SPLPNHLSLPRAACSPARVPR 84
P+ L PRP + P P+T LR + +G PL A P PR
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 85 RPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P A S++P S R +P +SP PV SP ASG + P
Sbjct: 77 AG-------PTRSAGTSSRNPASRPPASGRGERAPPAKNTSPG--PVSSPGRASGTTRPG 127
Query: 145 VGGARAWARLCRRRCPRCRSLSAP--ASEERGAAMGTRGPSAPVDTTPA 191
G + R ++ AP ++ GA T GP+ P +PA
Sbjct: 128 PLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPT-PGTPSPA 175
Score = 33.1 bits (74), Expect = 0.92
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 25/168 (14%)
Query: 28 PSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPV 87
PS + P+PP P A P P T L P P L +PLP P A S +P P
Sbjct: 309 PSGTKARPVPP-PDNAATP-LPAT-LPPSPPLA---TPLPLAPPSPSAPPSLQTLPSPPA 362
Query: 88 SCPGPEPLALAARRSQSPRVASTRSLRPPGSP--VPSPS---SPRPVPVPSPSCASGWSG 142
+ P P ++ Q+P S +++ P P + SPS P P+ + S +
Sbjct: 363 TPPSQAPPSMTTPPMQAP--PSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGS 420
Query: 143 PPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTP 190
P + ++ + R+ SL++P +R S P D+ P
Sbjct: 421 PTLQATHSFLTMSPRQTQ--ASLTSP----------SRPASTPPDSPP 456
Score = 33.1 bits (74), Expect = 0.92
Identities = 47/174 (27%), Positives = 66/174 (37%), Gaps = 30/174 (17%)
Query: 24 SISVPSVWTSSP--LPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPAR 81
S++ PS S+P PP +P P P P ++ L SPL H L + +
Sbjct: 440 SLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIH-PLQALSSLASH 498
Query: 82 VPRRPVSCPGPEPL----ALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCA 137
P+ P+S PL +LA Q+P + T PP +PS + P +P
Sbjct: 499 SPQAPLSSLIMPPLETQSSLAPPSLQTPPASLT---TPPLENLPSLAPPPLQTASAPLTT 555
Query: 138 SGWSGPPVGGARAWARLCRRRCPRCRSLSAPAS------EERGAAMGTRGPSAP 185
PP C CP L AP S E +++ T P AP
Sbjct: 556 PHLETPP----------CPAPCP----LQAPPSPLTTPPPETPSSIATPPPQAP 595
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 48.1 bits (113), Expect = 3e-05
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 37 PPRPS--PARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARV-----PRRPVSC 89
PPRPS PA AP P P P S LP +LP +A +PA P P +
Sbjct: 237 PPRPSLSPAAAPSAP----GPAP------SQLPGLAALPLSAGAPAAAIAGSGPAAPAAF 286
Query: 90 PGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCAS 138
G +PL+ + +P + S S P+P++P P P P + +S
Sbjct: 287 EGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSAASS 335
Score = 31.6 bits (70), Expect = 2.7
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 24/128 (18%)
Query: 33 SSPLPPRPSPARAP---RCPLTCLRPVPRLTCLGSPLP------NHLSLPRAACSPARVP 83
++P P P+P++ P PL+ P + G P LS P + S P
Sbjct: 246 AAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTPGGP 305
Query: 84 RRPVS-----------CPGPEPLALAARRSQSPRVASTRSLRPPGSPV-PSPSSPRPVPV 131
P + P P P +A SQ P+ AST PGS + +P P P+ +
Sbjct: 306 AEPSAPAAPSAAPAPAAPAPAPAPQSAASSQ-PQSASTPPALAPGSLLGAAPGLPSPL-L 363
Query: 132 PSPSCASG 139
P S ASG
Sbjct: 364 PQTS-ASG 370
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 47.4 bits (111), Expect = 5e-05
Identities = 40/122 (32%), Positives = 47/122 (38%), Gaps = 26/122 (21%)
Query: 34 SPLPPRPSPA----RAPRCPLTCLRPVP--RLTCLGSPLPNHLSLPRAACSPARVPRR-- 85
SP P PSP+ AP CP C PVP R P P P + P+ VP+R
Sbjct: 342 SPAPQCPSPSPPARAAPPCP-PCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRS 400
Query: 86 --PVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCAS-GWSG 142
P SC P P RS PP P P P P P P + A ++
Sbjct: 401 PVPPSCQSPSP--------------QRRSPVPPSCPAPQPRPPPPPPPGERTLAERAYAK 446
Query: 143 PP 144
PP
Sbjct: 447 PP 448
Score = 38.9 bits (89), Expect = 0.017
Identities = 39/106 (36%), Positives = 41/106 (38%), Gaps = 33/106 (31%)
Query: 34 SPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPE 93
SPL R SPA P+CP SP P PAR C P
Sbjct: 335 SPLSQRHSPA--PQCP--------------SPSP-----------PARAAPPCPPCQSPV 367
Query: 94 PLALAARRSQSPRVASTRSLRPPGSP-VPSPSSPRPVPVPSPSCAS 138
P RRS P S + R P SP PSP R PVP PSC S
Sbjct: 368 P----QRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVP-PSCQS 408
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 47.4 bits (111), Expect = 5e-05
Identities = 39/125 (31%), Positives = 43/125 (34%), Gaps = 12/125 (9%)
Query: 34 SPLPPRPSPARAPRCPLTCLRPVPRLTC-----LGSPLPNHLSLPRAACSPARVPRRPVS 88
SP P +P+P T P P+ LG P + P A SP P P
Sbjct: 204 SPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPE--PWGPSP 261
Query: 89 CPGPEPLALAARRSQSPRVASTRSLRPPGSPVP--SPSSPRPVPVPSPSCASGWSGPPVG 146
PE A S PR S P P P SP RP P SP W P G
Sbjct: 262 AASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSP---GSWKPGPPG 318
Query: 147 GARAW 151
R W
Sbjct: 319 SPRPW 323
Score = 37.4 bits (85), Expect = 0.049
Identities = 37/128 (28%), Positives = 45/128 (35%), Gaps = 25/128 (19%)
Query: 29 SVWTSSPLPPRPSPARAPR--CPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRP 86
S T+SP P +PSP+ +P P + P PR P A SP P
Sbjct: 270 SARTTSPEPRKPSPSESPEPWKPFPAVSPEPR-------------RPAPAVSPGSWKPGP 316
Query: 87 VSCPGPEPLALAARRSQSPRVASTRSLRP-PGSPVPSPSSPRPVPVPSPSCA-------- 137
P P +A S+ P P P+PS S P PS S A
Sbjct: 317 PGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVS 376
Query: 138 -SGWSGPP 144
S W PP
Sbjct: 377 PSSWKSPP 384
Score = 36.2 bits (82), Expect = 0.11
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 23/122 (18%)
Query: 22 IISISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPAR 81
I ++S+ + S L P SP P PL +P GS + L P P+
Sbjct: 127 IPALSMETQKLGSVLSPE-SPKPTPLTPLEPQKP-------GSVVSPELQTPL----PSP 174
Query: 82 VPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWS 141
P +P S PEP +S V ++ L +PVPSP +P PV S + S
Sbjct: 175 EPSKPASVSSPEP-------PKSVPVCESQKL----APVPSPEPQKPAPVSPESVKATLS 223
Query: 142 GP 143
P
Sbjct: 224 NP 225
Score = 33.5 bits (75), Expect = 0.70
Identities = 38/130 (29%), Positives = 49/130 (37%), Gaps = 16/130 (12%)
Query: 30 VWTSSPLPPRPSPARAP--RCPLTCLRPVPRLTCLGSPLPNHLS---LPRAACSPARVPR 84
V +SP P PSPA +P R P PR P P+ P A SP PR
Sbjct: 249 VLAASPEPWGPSPAASPESRKSARTTSPEPR-----KPSPSESPEPWKPFPAVSPE--PR 301
Query: 85 RPVSCPGP---EPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWS 141
RP P +P + R +++ P P PS S P+PS S W
Sbjct: 302 RPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVS-PGPWK 360
Query: 142 GPPVGGARAW 151
P + +W
Sbjct: 361 PTPSVSSASW 370
Score = 30.0 bits (66), Expect = 7.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 18/81 (22%)
Query: 78 SPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSP----------- 126
SP + + C EP ++ A ++ ++ S S P SP P+P +P
Sbjct: 108 SPPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLS---PESPKPTPLTPLEPQKPGSVVS 164
Query: 127 ----RPVPVPSPSCASGWSGP 143
P+P P PS + S P
Sbjct: 165 PELQTPLPSPEPSKPASVSSP 185
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 46.6 bits (109), Expect = 8e-05
Identities = 42/133 (31%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 24 SISVPSVWTSSPLPPRPSPARA------PRCPLT-CLRPVPRLTCLGSPLPNHLSLPRAA 76
S S P + P PP P++A P T P P L+ L +P P + P A
Sbjct: 344 SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQ--APPALA 401
Query: 77 CSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPS-----SPRPVPV 131
P + P P + P PLA + Q+P + L+ P SP PSP SP P
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPS--PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 459
Query: 132 PSPSCASGWSGPP 144
SPS PP
Sbjct: 460 VSPSATPPSQAPP 472
Score = 43.5 bits (101), Expect = 7e-04
Identities = 47/145 (32%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 26 SVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT-CLGSPLPNHLSLP------RAACS 78
S P +++P P P P AP PL +P P+ L +P L P +A S
Sbjct: 488 SPPMSPSATPPPQAPPPLAAP--PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFS 545
Query: 79 P-ARVPRRPVSCPGPE-PLALAARRSQSPRV--ASTRSLRPPGSPVPSPSS--------- 125
P A +P P++ P P+ P LAA Q P AS P P P P +
Sbjct: 546 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 605
Query: 126 ---PRPVPVPSPSCASGWSGPPVGG 147
P P P PS S +S SGP + G
Sbjct: 606 ALAPGPPPPPSRSPSSTLSGPDLAG 630
Score = 41.6 bits (96), Expect = 0.003
Identities = 39/120 (32%), Positives = 47/120 (39%), Gaps = 9/120 (7%)
Query: 26 SVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPR-LTCLGSPLPNHLSLPRAACSPARVPR 84
SV S S P P+ R P RP R L+ +PL S R+ S PR
Sbjct: 208 SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS---SPARSGPSARGTPR 264
Query: 85 RPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P P+P L A R P+V R +P P S P+ PSPS A PP
Sbjct: 265 APAHPSQPKPKGLQALRP--PQVTPPRK---DAAPALGPLSSSPLATPSPSAALQSQAPP 319
Score = 41.6 bits (96), Expect = 0.003
Identities = 53/178 (29%), Positives = 68/178 (38%), Gaps = 36/178 (20%)
Query: 35 PLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPA-------RVPRRPV 87
P PP P +AP P L P+ L P L+ P P+ + PRRP
Sbjct: 532 PSPPASFPGQAPFSPSASL-PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 590
Query: 88 SCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVP---------VPSPSCAS 138
+ PGP+ PR+ + PP P SPSS P +P
Sbjct: 591 T-PGPDTSV------SGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 643
Query: 139 GWSGPPVGGARAWARLCRRRCPRCRSLSA--PASEERGAA--MGTRG-PSAPVDTTPA 191
G+ P GGA A P L+A PA+ RG A + RG P AP+ PA
Sbjct: 644 GYDSGPEGGAAA-------SPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPA 694
Score = 38.9 bits (89), Expect = 0.017
Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 36 LPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLS--LPRAACSPARVP--RRPVSCPG 91
LPP +P P P P+ L PN L+ L +A SP P + P S P
Sbjct: 402 LPPLQAPPSPPASP-----PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 456
Query: 92 PEPLALAARR-SQSPRVASTRSLR----PPGSPVPSPSSPRPVPVPSPSCAS--GWSGPP 144
P++ +A SQ+P + L+ PP SP SPS+ P P P A + PP
Sbjct: 457 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPP 516
Query: 145 VGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKT 193
A A P ++L +P + G A PSA + +P T
Sbjct: 517 PQAPPALA------TPPLQALPSPPASFPGQA--PFSPSASLPMSPLAT 557
Score = 36.6 bits (83), Expect = 0.083
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 24 SISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVP 83
S+S + SSP PS PR P +P P+ L + P ++ PR +PA P
Sbjct: 241 SLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPK--GLQALRPPQVTPPRKDAAPALGP 298
Query: 84 --RRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSP-SSPRPVPVPSPS 135
P++ P P AA +SQ+P T P S + ++P P+ PSPS
Sbjct: 299 LSSSPLATPSPS----AALQSQAP---PTLPATPHSSSLTCQLATPLPLAPPSPS 346
Score = 36.2 bits (82), Expect = 0.11
Identities = 48/171 (28%), Positives = 68/171 (39%), Gaps = 21/171 (12%)
Query: 32 TSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPG 91
TS P P PSPA A R T +G P P + PR P PR+ VS
Sbjct: 164 TSGPTPGTPSPAMARRSRAAG-------TEVGLPRPAPSARPR---PPTEGPRKSVSSAS 213
Query: 92 ----PEPLALAARRSQSP---RVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
EP A RR + + ++RSL +P+ SP+ P +P + S P
Sbjct: 214 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 273
Query: 145 VGGARAWARLCRRRCPRCRSLSAPA-SEERGAAMGTRGPSAPVDTTPAKTI 194
G +A L + R +APA + + T PSA + + T+
Sbjct: 274 PKGLQA---LRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTL 321
Score = 33.9 bits (76), Expect = 0.54
Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 15/169 (8%)
Query: 28 PSVWTSSPLPPRPSPARAPRCPLT--CLRPVPRLTCLG-SPLPNHLSLPRAACSPARVPR 84
P+ L PRP + P P+T LR + +G PL A P PR
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 85 RPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P A S++P S R +P +SP PV SP ASG + P
Sbjct: 77 AG-------PTRSAGTSSRNPASRPPASGRGERAPPAKNTSPG--PVSSPGRASGTTRPG 127
Query: 145 VGGARAWARLCRRRCPRCRSLSAP--ASEERGAAMGTRGPSAPVDTTPA 191
G + R ++ AP ++ GA T GP+ P +PA
Sbjct: 128 PLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPT-PGTPSPA 175
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 46.6 bits (109), Expect = 8e-05
Identities = 42/133 (31%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 24 SISVPSVWTSSPLPPRPSPARA------PRCPLT-CLRPVPRLTCLGSPLPNHLSLPRAA 76
S S P + P PP P++A P T P P L+ L +P P + P A
Sbjct: 305 SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQ--APPALA 362
Query: 77 CSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPS-----SPRPVPV 131
P + P P + P PLA + Q+P + L+ P SP PSP SP P
Sbjct: 363 LPPLQAPPSPPASPPLSPLATPS--PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPP 420
Query: 132 PSPSCASGWSGPP 144
SPS PP
Sbjct: 421 VSPSATPPSQAPP 433
Score = 43.5 bits (101), Expect = 7e-04
Identities = 47/145 (32%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 26 SVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLT-CLGSPLPNHLSLP------RAACS 78
S P +++P P P P AP PL +P P+ L +P L P +A S
Sbjct: 449 SPPMSPSATPPPQAPPPLAAP--PLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFS 506
Query: 79 P-ARVPRRPVSCPGPE-PLALAARRSQSPRV--ASTRSLRPPGSPVPSPSS--------- 125
P A +P P++ P P+ P LAA Q P AS P P P P +
Sbjct: 507 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTL 566
Query: 126 ---PRPVPVPSPSCASGWSGPPVGG 147
P P P PS S +S SGP + G
Sbjct: 567 ALAPGPPPPPSRSPSSTLSGPDLAG 591
Score = 42.0 bits (97), Expect = 0.002
Identities = 39/120 (32%), Positives = 47/120 (39%), Gaps = 9/120 (7%)
Query: 26 SVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPR-LTCLGSPLPNHLSLPRAACSPARVPR 84
SV S S P P+ R P RP R L+ +PL S R+ S PR
Sbjct: 199 SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS---SPARSGPSARGTPR 255
Query: 85 RPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
P P+P L A R P+V R +P P S P+ PSPS S PP
Sbjct: 256 APAHPSQPKPKGLQALRP--PQVTPPRK---DAAPALGPLSSSPLATPSPSAPPSPSAPP 310
Score = 41.6 bits (96), Expect = 0.003
Identities = 53/178 (29%), Positives = 68/178 (38%), Gaps = 36/178 (20%)
Query: 35 PLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPA-------RVPRRPV 87
P PP P +AP P L P+ L P L+ P P+ + PRRP
Sbjct: 493 PSPPASFPGQAPFSPSASL-PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPP 551
Query: 88 SCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVP---------VPSPSCAS 138
+ PGP+ PR+ + PP P SPSS P +P
Sbjct: 552 T-PGPDTSV------SGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 604
Query: 139 GWSGPPVGGARAWARLCRRRCPRCRSLSA--PASEERGAA--MGTRG-PSAPVDTTPA 191
G+ P GGA A P L+A PA+ RG A + RG P AP+ PA
Sbjct: 605 GYDSGPEGGAAA-------SPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPA 655
Score = 38.9 bits (89), Expect = 0.017
Identities = 43/151 (28%), Positives = 58/151 (38%), Gaps = 15/151 (9%)
Query: 55 PVPRLTCLGSPLPNHLSLPRAACSPARVP-RRPVSCPGPEPLALAARR-------SQSPR 106
P R L +P P P +PA + G +PLA A +PR
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 107 VASTRSLRPP----GSPVPSPSSPRPVPVPSPSCASGWSGPPVGGARAWARLCRRRCPRC 162
TR+ RPP G P + P PV SP ASG + P G + R
Sbjct: 77 AGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARG 136
Query: 163 RSLSAP--ASEERGAAMGTRGPSAPVDTTPA 191
++ AP ++ GA T GP+ P +PA
Sbjct: 137 KATEAPKRSALSAGARRDTSGPT-PGTPSPA 166
Score = 38.9 bits (89), Expect = 0.017
Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 36 LPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLS--LPRAACSPARVP--RRPVSCPG 91
LPP +P P P P+ L PN L+ L +A SP P + P S P
Sbjct: 363 LPPLQAPPSPPASP-----PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 417
Query: 92 PEPLALAARR-SQSPRVASTRSLR----PPGSPVPSPSSPRPVPVPSPSCAS--GWSGPP 144
P++ +A SQ+P + L+ PP SP SPS+ P P P A + PP
Sbjct: 418 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPP 477
Query: 145 VGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKT 193
A A P ++L +P + G A PSA + +P T
Sbjct: 478 PQAPPALA------TPPLQALPSPPASFPGQA--PFSPSASLPMSPLAT 518
Score = 37.4 bits (85), Expect = 0.049
Identities = 48/162 (29%), Positives = 65/162 (40%), Gaps = 21/162 (12%)
Query: 32 TSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPG 91
TS P P PSPA A R T +G P P + PR P PR+ VS
Sbjct: 155 TSGPTPGTPSPAMARRSRAAG-------TEVGLPRPAPSARPR---PPTEGPRKSVSSAS 204
Query: 92 ----PEPLALAARRSQSP---RVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPP 144
EP A RR + + ++RSL +P+ SP+ P +P + S P
Sbjct: 205 EHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK 264
Query: 145 VGGARAWARLCRRRCPRCRSLSAPA-SEERGAAMGTRGPSAP 185
G +A L + R +APA + + T PSAP
Sbjct: 265 PKGLQA---LRPPQVTPPRKDAAPALGPLSSSPLATPSPSAP 303
Score = 33.5 bits (75), Expect = 0.70
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 13/114 (11%)
Query: 24 SISVPSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVP 83
S+S + SSP PS PR P +P P+ L + P ++ PR +PA P
Sbjct: 232 SLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPK--GLQALRPPQVTPPRKDAAPALGP 289
Query: 84 --RRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPS 135
P++ P P S P ++ SL+ SP +P S + SP+
Sbjct: 290 LSSSPLATPSP---------SAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPT 334
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 46.6 bits (109), Expect = 8e-05
Identities = 43/124 (34%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 28 PSVWTSSPLPPRPSPARAPRCPLTCLRPVPR-LTCLGSPLPNHLSLPRAACSPARVPRRP 86
PS S P R SP +PR RP P + S LP+ +L C P + RRP
Sbjct: 465 PSALDSGPRGARDSPPGSPR-----RRPGPGPRSASASLLPDAFALTAFECEPQAL-RRP 518
Query: 87 VSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPVG 146
PGP P A AA P A T SP P PS+ P ++ W P G
Sbjct: 519 ---PGPFPAAPAAPDGADPGEAPTPPSSAQRSPGPRPSAHSHAGSLRPGLSASWGEP--G 573
Query: 147 GARA 150
G RA
Sbjct: 574 GLRA 577
>gi|33186895 selenoprotein V [Homo sapiens]
Length = 346
Score = 46.6 bits (109), Expect = 8e-05
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 25 ISVPSVWTSSPLPPRPSPARAPRC-PLTCLRPVPRLT------CLGSPLPNHLSL--PRA 75
+ PS +SPL P+PA+ P P L +PRL + +P+P + + P
Sbjct: 49 VLTPSPAGTSPLVLTPAPAQIPTLVPTPALARIPRLVPPPAPAWIPTPVPTPVPVRNPTP 108
Query: 76 ACSPARVPRRPVSCPGPEPL-ALAARRSQSP----RVASTRSLRPPGSPVPS-PSSPRPV 129
+PAR PV P P P LA R+ P +A L PP P P P P
Sbjct: 109 VPTPARTLTPPVRVPAPAPAQLLAGIRAALPVLDSYLAPALPLDPPPEPAPELPLLPEED 168
Query: 130 PVPSPS-----CASGWSGPPVG 146
P P+PS S +GP G
Sbjct: 169 PEPAPSLKLIPSVSSEAGPAPG 190
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 1e-04
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 38/184 (20%)
Query: 38 PRPSPARAPRCPLTCLRPVPRLTCLGS-------PLPNHLSL-PRAACSPARVPRRPVSC 89
P P+P R P+ + PR + PLP + P + P R P C
Sbjct: 305 PPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEP--DC 362
Query: 90 PGPEPLALAARRSQSPRVASTRS--------------LRPPGSPVPSPSSPRPVPVPSPS 135
PG L A SPR+ ++S L PP P+P P+ P P P
Sbjct: 363 PGE----LKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLP 418
Query: 136 CASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIV 195
CA + PP G + + + P + P S E A+ SAPVD +
Sbjct: 419 CAQKAAHPPAG----FTKTPKSSSPALKPKPNPPSPENTAS------SAPVDWRDPSQME 468
Query: 196 VYRN 199
RN
Sbjct: 469 KLRN 472
Score = 45.8 bits (107), Expect = 1e-04
Identities = 49/150 (32%), Positives = 60/150 (40%), Gaps = 26/150 (17%)
Query: 34 SPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPE 93
SPLP PS A P L P P + P+ LS P SP+ +P P P
Sbjct: 161 SPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPS-IPTPPDFIPPAP 219
Query: 94 PLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGARAW-- 151
PLA L PP PVP+P+ P P SP PP GG W
Sbjct: 220 PLAF---------------LAPPPPPVPAPAPPAPA---SPHTVGTRLFPP-GGVTKWKS 260
Query: 152 -ARLCRRRCPRCRSLSAPAS--EERGAAMG 178
L R+ R+ S P S E +G+A+G
Sbjct: 261 DVALNGRQAEATRA-SPPRSPAEPKGSALG 289
Score = 33.1 bits (74), Expect = 0.92
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 20/114 (17%)
Query: 33 SSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPG- 91
SSP P P P PL L P P P+P P A SP V R + PG
Sbjct: 204 SSPSIPTPPDFIPPAPPLAFLAPPP------PPVP--APAPPAPASPHTVGTR-LFPPGG 254
Query: 92 ----PEPLALAARRSQSPRVASTRS-LRPPGS-----PVPSPSSPRPVPVPSPS 135
+AL R++++ R + RS P GS P P + PR VP P+
Sbjct: 255 VTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPT 308
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 1e-04
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 38/184 (20%)
Query: 38 PRPSPARAPRCPLTCLRPVPRLTCLGS-------PLPNHLSL-PRAACSPARVPRRPVSC 89
P P+P R P+ + PR + PLP + P + P R P C
Sbjct: 305 PPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEP--DC 362
Query: 90 PGPEPLALAARRSQSPRVASTRS--------------LRPPGSPVPSPSSPRPVPVPSPS 135
PG L A SPR+ ++S L PP P+P P+ P P P
Sbjct: 363 PGE----LKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLP 418
Query: 136 CASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIV 195
CA + PP G + + + P + P S E A+ SAPVD +
Sbjct: 419 CAQKAAHPPAG----FTKTPKSSSPALKPKPNPPSPENTAS------SAPVDWRDPSQME 468
Query: 196 VYRN 199
RN
Sbjct: 469 KLRN 472
Score = 45.8 bits (107), Expect = 1e-04
Identities = 49/150 (32%), Positives = 60/150 (40%), Gaps = 26/150 (17%)
Query: 34 SPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPE 93
SPLP PS A P L P P + P+ LS P SP+ +P P P
Sbjct: 161 SPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPS-IPTPPDFIPPAP 219
Query: 94 PLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGARAW-- 151
PLA L PP PVP+P+ P P SP PP GG W
Sbjct: 220 PLAF---------------LAPPPPPVPAPAPPAPA---SPHTVGTRLFPP-GGVTKWKS 260
Query: 152 -ARLCRRRCPRCRSLSAPAS--EERGAAMG 178
L R+ R+ S P S E +G+A+G
Sbjct: 261 DVALNGRQAEATRA-SPPRSPAEPKGSALG 289
Score = 33.1 bits (74), Expect = 0.92
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 20/114 (17%)
Query: 33 SSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPG- 91
SSP P P P PL L P P P+P P A SP V R + PG
Sbjct: 204 SSPSIPTPPDFIPPAPPLAFLAPPP------PPVP--APAPPAPASPHTVGTR-LFPPGG 254
Query: 92 ----PEPLALAARRSQSPRVASTRS-LRPPGS-----PVPSPSSPRPVPVPSPS 135
+AL R++++ R + RS P GS P P + PR VP P+
Sbjct: 255 VTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPT 308
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 46.2 bits (108), Expect = 1e-04
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 38/184 (20%)
Query: 38 PRPSPARAPRCPLTCLRPVPRLTCLGS-------PLPNHLSL-PRAACSPARVPRRPVSC 89
P P+P R P+ + PR + PLP + P + P R P C
Sbjct: 305 PPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEP--DC 362
Query: 90 PGPEPLALAARRSQSPRVASTRS--------------LRPPGSPVPSPSSPRPVPVPSPS 135
PG L A SPR+ ++S L PP P+P P+ P P P
Sbjct: 363 PGE----LKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPPLP 418
Query: 136 CASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIV 195
CA + PP G + + + P + P S E A+ SAPVD +
Sbjct: 419 CAQKAAHPPAG----FTKTPKSSSPALKPKPNPPSPENTAS------SAPVDWRDPSQME 468
Query: 196 VYRN 199
RN
Sbjct: 469 KLRN 472
Score = 45.8 bits (107), Expect = 1e-04
Identities = 49/150 (32%), Positives = 60/150 (40%), Gaps = 26/150 (17%)
Query: 34 SPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPGPE 93
SPLP PS A P L P P + P+ LS P SP+ +P P P
Sbjct: 161 SPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPS-IPTPPDFIPPAP 219
Query: 94 PLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPVGGARAW-- 151
PLA L PP PVP+P+ P P SP PP GG W
Sbjct: 220 PLAF---------------LAPPPPPVPAPAPPAPA---SPHTVGTRLFPP-GGVTKWKS 260
Query: 152 -ARLCRRRCPRCRSLSAPAS--EERGAAMG 178
L R+ R+ S P S E +G+A+G
Sbjct: 261 DVALNGRQAEATRA-SPPRSPAEPKGSALG 289
Score = 33.1 bits (74), Expect = 0.92
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 20/114 (17%)
Query: 33 SSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPVSCPG- 91
SSP P P P PL L P P P+P P A SP V R + PG
Sbjct: 204 SSPSIPTPPDFIPPAPPLAFLAPPP------PPVP--APAPPAPASPHTVGTR-LFPPGG 254
Query: 92 ----PEPLALAARRSQSPRVASTRS-LRPPGS-----PVPSPSSPRPVPVPSPS 135
+AL R++++ R + RS P GS P P + PR VP P+
Sbjct: 255 VTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPT 308
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 46.2 bits (108), Expect = 1e-04
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 24 SISVP---SVWTSSPLP---PRPSPARAPRC--PLTCLR-PVPRL--TCLGSPLPNHLSL 72
S+ VP S S P+P P P+P P PL ++ PVP T + +P+P +
Sbjct: 280 SVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLA 339
Query: 73 PRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPS-SPRPVPV 131
P A +P P P S P P P + S +P + + P +P P+P +P P P+
Sbjct: 340 PMPASTPPAAPAPP-SVPMPTPTPSSGPPS-TPTLIPAFAPTPVPAPTPAPIFTPAPTPM 397
Query: 132 PSPSCASGWSGPPVGGARAWARLCRRRCPRCRSLSAPASEERGAAMGTRGPSAPVDTTP 190
P+ + A+ + P+ + + +R+C P S + G + PS P+ P
Sbjct: 398 PAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVL---TPSQPLVYIP 453
Score = 44.7 bits (104), Expect = 3e-04
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 30/149 (20%)
Query: 15 HYKILILIISISVPSVWTSSPLPP-RPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSL- 72
H ++ + ++ SVP+ P PP P PA AP P VP L +PL S+
Sbjct: 233 HSGLVPVQVATSVPA-----PSPPLAPVPALAPAPP-----SVPTLISDSNPLSVSASVL 282
Query: 73 -PRAACSPARVPRRPVSCPGPEPLA-------LAARRSQSPRVASTRSLRPPGSPV---- 120
P A +P P P+S P P PL+ LA ++ P A T L P +PV
Sbjct: 283 VPVPASAPPSGPV-PLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPM 341
Query: 121 -----PSPSSPRPVPVPSPSCASGWSGPP 144
P+ +P VP+P+P+ +SG P
Sbjct: 342 PASTPPAAPAPPSVPMPTPTPSSGPPSTP 370
Score = 35.0 bits (79), Expect = 0.24
Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 21/134 (15%)
Query: 26 SVPSVWTS-SPLP-----PRPSPARAP-------RCPLTCLRPVPRLTCLGSPLPNHLSL 72
++P V T+ SPLP P P A P + PL+ PVP + P+ S+
Sbjct: 188 TLPLVTTNFSPLPAPICPPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLV--PVQVATSV 245
Query: 73 PRAACSPARVPRRPVSCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVP 132
P A SP P PV P P ++ S S ++ + S+ P PS P P+ P
Sbjct: 246 P--APSP---PLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAP 300
Query: 133 SPSCAS-GWSGPPV 145
+P+ S S PP+
Sbjct: 301 APAPLSVPVSAPPL 314
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,042,089
Number of Sequences: 37866
Number of extensions: 2259559
Number of successful extensions: 17692
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 1055
Number of HSP's that attempted gapping in prelim test: 12510
Number of HSP's gapped (non-prelim): 4565
length of query: 714
length of database: 18,247,518
effective HSP length: 109
effective length of query: 605
effective length of database: 14,120,124
effective search space: 8542675020
effective search space used: 8542675020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.