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Search of human proteins with 239747570
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747570 PREDICTED: hypothetical protein [Homo sapiens]
(128 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747570 PREDICTED: hypothetical protein [Homo sapiens] 263 3e-71
gi|169162343 PREDICTED: hypothetical protein [Homo sapiens] 103 3e-23
gi|113411617 PREDICTED: hypothetical protein [Homo sapiens] 103 3e-23
gi|239757788 PREDICTED: hypothetical protein [Homo sapiens] 39 8e-04
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 37 0.003
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 33 0.061
gi|169208826 PREDICTED: hypothetical protein [Homo sapiens] 32 0.10
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 32 0.10
gi|148839382 ring finger protein 169 [Homo sapiens] 32 0.14
gi|239757272 PREDICTED: hypothetical protein [Homo sapiens] 32 0.18
gi|239751775 PREDICTED: hypothetical protein [Homo sapiens] 32 0.18
gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo ... 32 0.18
gi|4507579 tumor necrosis factor receptor superfamily, member 4 ... 32 0.18
gi|110681708 zinc finger protein 579 [Homo sapiens] 32 0.18
gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens] 31 0.23
gi|113429036 PREDICTED: hypothetical protein [Homo sapiens] 31 0.23
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 31 0.23
gi|239749498 PREDICTED: hypothetical protein [Homo sapiens] 31 0.23
gi|169214602 PREDICTED: similar to hCG2041260 [Homo sapiens] 31 0.23
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 31 0.23
gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo ... 31 0.23
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens] 31 0.23
gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens] 31 0.23
gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens] 31 0.23
gi|22129776 HtrA serine peptidase 3 [Homo sapiens] 31 0.23
gi|52630419 sterol regulatory element binding transcription fact... 30 0.39
gi|22547195 sterol regulatory element binding transcription fact... 30 0.39
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 30 0.39
>gi|239747570 PREDICTED: hypothetical protein [Homo sapiens]
Length = 128
Score = 263 bits (672), Expect = 3e-71
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQG 60
MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQG
Sbjct: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQG 60
Query: 61 LAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTSWSLRPLL 120
LAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTSWSLRPLL
Sbjct: 61 LAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTSWSLRPLL 120
Query: 121 PLPLPLGA 128
PLPLPLGA
Sbjct: 121 PLPLPLGA 128
>gi|169162343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 103 bits (258), Expect = 3e-23
Identities = 59/72 (81%), Positives = 60/72 (83%), Gaps = 4/72 (5%)
Query: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQ- 59
MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLE G CL Q
Sbjct: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAG-CLPVQA 59
Query: 60 --GLAERRVAVQ 69
G A RR AV+
Sbjct: 60 GSGRASRRRAVR 71
>gi|113411617 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 103 bits (258), Expect = 3e-23
Identities = 59/72 (81%), Positives = 60/72 (83%), Gaps = 4/72 (5%)
Query: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQ- 59
MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLE G CL Q
Sbjct: 1 MASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAG-CLPVQA 59
Query: 60 --GLAERRVAVQ 69
G A RR AV+
Sbjct: 60 GSGRASRRRAVR 71
>gi|239757788 PREDICTED: hypothetical protein [Homo sapiens]
Length = 191
Score = 39.3 bits (90), Expect = 8e-04
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQGLA 62
SG +GG+ + G+++R GE KGG S SRP + A LR + G S LA
Sbjct: 107 SGGQLGGQLQSGQQERDCDCAGE-KGGQSSPSRPTQKAAISKRLRQPKLAGQSTS---LA 162
Query: 63 ERRVAVQCAGCPG 75
+ C GCPG
Sbjct: 163 SH---LHCHGCPG 172
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 37.4 bits (85), Expect = 0.003
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 4 GAGVGGERRRGEEKRRGKGR--GEAKGGPGSSSRPAL--RLAADSALRLERRPGACLSRQ 59
G VG RRRG E+RR +GR G A G P + PA R A R R+ G
Sbjct: 241 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRG---GGP 297
Query: 60 GLAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTSW 114
G++ R G G+G RGG+T RAR S P+P +W
Sbjct: 298 GVSPRE------GAQGEG------------VRGGVTPRARGSS--TCLRPSPATW 332
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.4 bits (85), Expect = 0.003
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 4 GAGVGGERRRGEEKRRGKGR--GEAKGGPGSSSRPAL--RLAADSALRLERRPGACLSRQ 59
G VG RRRG E+RR +GR G A G P + PA R A R R+ G
Sbjct: 335 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRG---GGP 391
Query: 60 GLAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTSW 114
G++ R G G+G RGG+T RAR S P+P +W
Sbjct: 392 GVSPRE------GAQGEG------------VRGGVTPRARGSS--TCLRPSPATW 426
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.4 bits (85), Expect = 0.003
Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 4 GAGVGGERRRGEEKRRGKGR--GEAKGGPGSSSRPAL--RLAADSALRLERRPGACLSRQ 59
G VG RRRG E+RR +GR G A G P + PA R A R R+ G
Sbjct: 335 GEVVGARRRRGGEERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRG---GGP 391
Query: 60 GLAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTSW 114
G++ R G G+G RGG+T RAR S P+P +W
Sbjct: 392 GVSPRE------GAQGEG------------VRGGVTPRARGSS--TCLRPSPATW 426
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 33.1 bits (74), Expect = 0.061
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 8/134 (5%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQGLA 62
+GAG GG+ R R GGP S +R R A + +RP + S+Q ++
Sbjct: 1117 TGAGAGGDHRSQRGHAASPARPSRPGGPQSRARVPSRAAPGKSEPPSKRPLSSKSQQSVS 1176
Query: 63 ERRVAVQCAGCPGDG-----FPSLARCCRYCLTRGGLTLRARARSRRRAP--LPTPTSWS 115
+ AG G S+ + RGG R P P S
Sbjct: 1177 AEDDEEEDAGFFKGGKEDLLSSSVPKWPSSSTPRGGKDADGSLAKEEREPAIALAPRGGS 1236
Query: 116 LRPL-LPLPLPLGA 128
L P+ PLP P G+
Sbjct: 1237 LAPVKRPLPPPPGS 1250
>gi|169208826 PREDICTED: hypothetical protein [Homo sapiens]
Length = 239
Score = 32.3 bits (72), Expect = 0.10
Identities = 37/106 (34%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 12 RRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQ----GLAERRVA 67
R GE KR+G GR G GS S +R A +ALR R P A +R+ GL R
Sbjct: 139 RAGEVKRQGPGR-----GLGSRSSVRVRQVA-AALRAFRTPLAVCTRRYSASGLISSRGV 192
Query: 68 VQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTS 113
AG G P +R RG AR + R +P P P +
Sbjct: 193 PLRAGSQGAQPPGRSR-----RLRGEDGGAARTAADRGSPAPWPVT 233
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 32.3 bits (72), Expect = 0.10
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 18/77 (23%)
Query: 18 RRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQGLAERRVAVQ-------- 69
R+G+ KGG G S AL L A+ E R C R GLA R + +Q
Sbjct: 729 RQGRAAPAFKGGGGPRSTHALDLEAE-----EERTRLCDDRLGLASRELLLQDSKDRVEF 783
Query: 70 -----CAGCPGDGFPSL 81
+ CPGD P L
Sbjct: 784 ARIHPPSSCPGDLAPHL 800
>gi|148839382 ring finger protein 169 [Homo sapiens]
Length = 708
Score = 32.0 bits (71), Expect = 0.14
Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 9/114 (7%)
Query: 2 ASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALR--LERRP-----GA 54
+S A RRG R + G PG +S P+L + + L+ L RP
Sbjct: 11 SSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRPEESGCAG 70
Query: 55 CLSRQGLAERRVAVQ--CAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRA 106
CL G A C GC + C C RG R RAR +A
Sbjct: 71 CLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARDDGQA 124
>gi|239757272 PREDICTED: hypothetical protein [Homo sapiens]
Length = 314
Score = 31.6 bits (70), Expect = 0.18
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 2 ASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADS--ALRLERRPGACLSRQ 59
+SG G+ GE G K RG+ GEA G G+ S + L + + R+ R +S
Sbjct: 195 SSGGGITGE---GRSKVRGRVEGEAWGSRGTMSPGGVALPGNQTPSPRVRRMAWEVISGS 251
Query: 60 GLAERRVA-VQCAGC------PGDGFPSLARCCRYCLTRGGLTL---RARARSRRRAP 107
RR + + GC P DG C++ ++ G L RA R RR P
Sbjct: 252 TRDVRRESGARSEGCTFREPPPADGSD-----CKFPISDGARRLSSSRAEFRPRRPGP 304
>gi|239751775 PREDICTED: hypothetical protein [Homo sapiens]
Length = 314
Score = 31.6 bits (70), Expect = 0.18
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 2 ASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADS--ALRLERRPGACLSRQ 59
+SG G+ GE G K RG+ GEA G G+ S + L + + R+ R +S
Sbjct: 195 SSGGGITGE---GRSKVRGRVEGEAWGSRGTMSPGGVALPGNQTPSPRVRRMAWEVISGS 251
Query: 60 GLAERRVA-VQCAGC------PGDGFPSLARCCRYCLTRGGLTL---RARARSRRRAP 107
RR + + GC P DG C++ ++ G L RA R RR P
Sbjct: 252 TRDVRRESGARSEGCTFREPPPADGSD-----CKFPISDGARRLSSSRAEFRPRRPGP 304
>gi|239746270 PREDICTED: hypothetical protein XP_002343719 [Homo
sapiens]
Length = 314
Score = 31.6 bits (70), Expect = 0.18
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 2 ASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADS--ALRLERRPGACLSRQ 59
+SG G+ GE G K RG+ GEA G G+ S + L + + R+ R +S
Sbjct: 195 SSGGGITGE---GRSKVRGRVEGEAWGSRGTMSPGGVALPGNQTPSPRVRRMAWEVISGS 251
Query: 60 GLAERRVA-VQCAGC------PGDGFPSLARCCRYCLTRGGLTL---RARARSRRRAP 107
RR + + GC P DG C++ ++ G L RA R RR P
Sbjct: 252 TRDVRRESGARSEGCTFREPPPADGSD-----CKFPISDGARRLSSSRAEFRPRRPGP 304
>gi|4507579 tumor necrosis factor receptor superfamily, member 4
precursor [Homo sapiens]
Length = 277
Score = 31.6 bits (70), Expect = 0.18
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 45 ALRLERRPGACLSRQGLAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLR 97
A RL R P A L GL V C GD +PS RCC C G+ R
Sbjct: 5 ARRLGRGPCAALLLLGLGLSTVTG--LHCVGDTYPSNDRCCHECRPGNGMVSR 55
>gi|110681708 zinc finger protein 579 [Homo sapiens]
Length = 562
Score = 31.6 bits (70), Expect = 0.18
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 2 ASGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQGL 61
A G+ R RG + RG+GRG +GG G+ P L + RL R P LSR L
Sbjct: 9 AQGSPPHRGRGRGRGRGRGRGRGRGRGGAGAPRAP---LPCPTCGRLFRFP-YYLSRHRL 64
Query: 62 AERRVAVQ-CAGCP 74
+ + C CP
Sbjct: 65 SHSGLRPHACPLCP 78
>gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens]
Length = 412
Score = 31.2 bits (69), Expect = 0.23
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 4 GAGVGGERRRGEEKRRGKGRG---EAKGGPGSSSRPALRLAADSALRLERRPGACLSRQG 60
GAG G ERR+G + G G G A+GG LR D+ + GA +S G
Sbjct: 100 GAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKDAQV---MNLGAFIS--G 154
Query: 61 LAERRVAVQCAGCPGDGFPSL 81
+ R + + GC G G L
Sbjct: 155 DLKERDSWRVEGCFGGGAQGL 175
>gi|113429036 PREDICTED: hypothetical protein [Homo sapiens]
Length = 388
Score = 31.2 bits (69), Expect = 0.23
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 4 GAGVGGERRRGEEKRRGKGRG---EAKGGPGSSSRPALRLAADSALRLERRPGACLSRQG 60
GAG G ERR+G + G G G A+GG LR D+ + GA +S G
Sbjct: 100 GAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKDAQV---MNLGAFIS--G 154
Query: 61 LAERRVAVQCAGCPGDGFPSL 81
+ R + + GC G G L
Sbjct: 155 DLKERDSWRVEGCFGGGAQGL 175
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 31.2 bits (69), Expect = 0.23
Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 28/133 (21%)
Query: 8 GGERRRGEEKRRGKGR----------GEAKGGPGSSSRPAL--RLAADSALRLERRPGAC 55
GG R RG+ RGK R A+ S+ RP +A S+ R +RR C
Sbjct: 213 GGLRPRGKRPARGKKRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPC 272
Query: 56 LSRQGLAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTSWS 115
R G A+ V A PG+G + G T R R PTS S
Sbjct: 273 PHRAGGAD-GVGSHGARAPGEG------------SAGSGTERVELGPHVRPFFLPPTSSS 319
Query: 116 L---RPLLPLPLP 125
P L +PLP
Sbjct: 320 FFGGPPRLHVPLP 332
>gi|239749498 PREDICTED: hypothetical protein [Homo sapiens]
Length = 692
Score = 31.2 bits (69), Expect = 0.23
Identities = 37/129 (28%), Positives = 49/129 (37%), Gaps = 15/129 (11%)
Query: 4 GAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQGLAE 63
GAG G + +R + RG+A G P + + R + LR + G R GLA
Sbjct: 503 GAGPGSAEKADRHRRLLERRGQASGNPDTLRQ--TRPKQPAPLRRAMQGGPAGYRAGLAA 560
Query: 64 RRVAVQC-AGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTP------TSWSL 116
R AG G G + R GG R S R +P+ +L
Sbjct: 561 LRTPPPAPAGNAGTGTGARKR------PEGGRGARYPCGSSSRVAVPSKEPAGPRAQRNL 614
Query: 117 RPLLPLPLP 125
PLLPL P
Sbjct: 615 LPLLPLLAP 623
>gi|169214602 PREDICTED: similar to hCG2041260 [Homo sapiens]
Length = 388
Score = 31.2 bits (69), Expect = 0.23
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 4 GAGVGGERRRGEEKRRGKGRG---EAKGGPGSSSRPALRLAADSALRLERRPGACLSRQG 60
GAG G ERR+G + G G G A+GG LR D+ + GA +S G
Sbjct: 100 GAGAGDERRKGAQHLGGSGLGGVTRAEGGARRLGTGRLRAEKDAQV---MNLGAFIS--G 154
Query: 61 LAERRVAVQCAGCPGDGFPSL 81
+ R + + GC G G L
Sbjct: 155 DLKERDSWRVEGCFGGGAQGL 175
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 31.2 bits (69), Expect = 0.23
Identities = 40/133 (30%), Positives = 50/133 (37%), Gaps = 28/133 (21%)
Query: 8 GGERRRGEEKRRGKGR----------GEAKGGPGSSSRPAL--RLAADSALRLERRPGAC 55
GG R RG+ RGK R A+ S+ RP +A S+ R +RR C
Sbjct: 213 GGLRPRGKRPARGKKRPSSQRRCSSPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPC 272
Query: 56 LSRQGLAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTPTSWS 115
R G A+ V A PG+G + G T R R PTS S
Sbjct: 273 PHRAGGAD-GVGSHGARAPGEG------------SAGSGTERVELGPHVRPFFLPPTSSS 319
Query: 116 L---RPLLPLPLP 125
P L +PLP
Sbjct: 320 FFGGPPRLHVPLP 332
>gi|239743634 PREDICTED: hypothetical protein XP_002342919 [Homo
sapiens]
Length = 692
Score = 31.2 bits (69), Expect = 0.23
Identities = 37/129 (28%), Positives = 49/129 (37%), Gaps = 15/129 (11%)
Query: 4 GAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQGLAE 63
GAG G + +R + RG+A G P + + R + LR + G R GLA
Sbjct: 503 GAGPGSAEKADRHRRLLERRGQASGNPDTLRQ--TRPKQPAPLRRAMQGGPAGYRAGLAA 560
Query: 64 RRVAVQC-AGCPGDGFPSLARCCRYCLTRGGLTLRARARSRRRAPLPTP------TSWSL 116
R AG G G + R GG R S R +P+ +L
Sbjct: 561 LRTPPPAPAGNAGTGTGARKR------PEGGRGARYPCGSSSRVAVPSKEPAGPRAQRNL 614
Query: 117 RPLLPLPLP 125
PLLPL P
Sbjct: 615 LPLLPLLAP 623
>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 31.2 bits (69), Expect = 0.23
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSR 35
+G G G RR G EKR R E GGP SSR
Sbjct: 144 AGGGSGDRRRAGPEKRPKSSR-EGSGGPQESSR 175
>gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 31.2 bits (69), Expect = 0.23
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSR 35
+G G G RR G EKR R E GGP SSR
Sbjct: 144 AGGGSGDRRRAGPEKRPKSSR-EGSGGPQESSR 175
>gi|5031975 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 31.2 bits (69), Expect = 0.23
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSR 35
+G G G RR G EKR R E GGP SSR
Sbjct: 144 AGGGSGDRRRAGPEKRPKSSR-EGSGGPQESSR 175
>gi|22129776 HtrA serine peptidase 3 [Homo sapiens]
Length = 453
Score = 31.2 bits (69), Expect = 0.23
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 37 ALRLAADSALRLERRPGA--CLSRQGLAERRVAVQCAGCPGDGFPSLARCCRYCLTRGG 93
AL LAA +AL L R P A C +R ++ CPG P L CC C G
Sbjct: 5 ALLLAALAALALAREPPAAPCPARCDVSR----CPSPRCPGGYVPDLCNCCLVCAASEG 59
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 30.4 bits (67), Expect = 0.39
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 23 RGEAKGGPGSSSRPALRLAADSALRLERRPG----ACLSRQGLAERRVAVQCAGC 73
RG GG GS S P + DS + E+RP L R LA + C C
Sbjct: 476 RGSGSGGSGSDSEPDSPVFEDSKAKPEQRPSLHSRGMLDRSRLALCTLVFLCLSC 530
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 30.4 bits (67), Expect = 0.39
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 23 RGEAKGGPGSSSRPALRLAADSALRLERRPG----ACLSRQGLAERRVAVQCAGC 73
RG GG GS S P + DS + E+RP L R LA + C C
Sbjct: 446 RGSGSGGSGSDSEPDSPVFEDSKAKPEQRPSLHSRGMLDRSRLALCTLVFLCLSC 500
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 30.4 bits (67), Expect = 0.39
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 22/118 (18%)
Query: 3 SGAGVGGERRRGEEKRRGKGRG------------EAKGGPGSSSRPALRLAADSAL---- 46
+ G+ +RRG++ R GK RG +++G G+ SR + AA +
Sbjct: 704 AAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGG 763
Query: 47 RLERRPGACLSRQGLAERRVAVQCAGCPGDGFPSLARCCRYCLTRGGLTLRARARSRR 104
RR G SR G Q A G P + +RGG +A A ++
Sbjct: 764 AKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVK------SRGGRGQKAAAGGKK 815
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,438,543
Number of Sequences: 37866
Number of extensions: 348141
Number of successful extensions: 2535
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 2229
Number of HSP's gapped (non-prelim): 456
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.