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Search of human proteins with 239747210
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747210 PREDICTED: hypothetical protein XP_002346689 [Homo
sapiens]
(275 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747210 PREDICTED: hypothetical protein XP_002346689 [Homo ... 586 e-168
gi|160707881 formin 2 [Homo sapiens] 63 3e-10
gi|150170670 piccolo isoform 2 [Homo sapiens] 58 8e-09
gi|150378539 piccolo isoform 1 [Homo sapiens] 58 8e-09
gi|117938759 GNAS complex locus XLas [Homo sapiens] 55 5e-08
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 54 2e-07
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 51 1e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 51 1e-06
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 50 2e-06
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 47 1e-05
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens] 47 2e-05
gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens] 47 2e-05
gi|222537747 hypothetical protein LOC342979 [Homo sapiens] 46 3e-05
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 44 2e-04
gi|150418009 transforming, acidic coiled-coil containing protein... 42 4e-04
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 41 0.001
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 41 0.001
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 41 0.001
gi|188536004 zinc finger protein 469 [Homo sapiens] 41 0.001
gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] 41 0.001
gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II, pol... 40 0.002
gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II, pol... 40 0.002
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 40 0.002
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 40 0.002
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H... 40 0.002
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 40 0.002
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 40 0.002
gi|110349721 titin isoform novex-3 [Homo sapiens] 40 0.003
gi|239757110 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 39 0.006
>gi|239747210 PREDICTED: hypothetical protein XP_002346689 [Homo
sapiens]
Length = 275
Score = 586 bits (1510), Expect = e-168
Identities = 275/275 (100%), Positives = 275/275 (100%)
Query: 1 MDGWIERGNCPPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMD 60
MDGWIERGNCPPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMD
Sbjct: 1 MDGWIERGNCPPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMD 60
Query: 61 RGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSR 120
RGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSR
Sbjct: 61 RGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSR 120
Query: 121 PPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAE 180
PPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAE
Sbjct: 121 PPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAE 180
Query: 181 LDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALP 240
LDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALP
Sbjct: 181 LDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALP 240
Query: 241 MPPPEMLQLGAPHVQGAGDTGHSAARGEGMWVTQL 275
MPPPEMLQLGAPHVQGAGDTGHSAARGEGMWVTQL
Sbjct: 241 MPPPEMLQLGAPHVQGAGDTGHSAARGEGMWVTQL 275
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 62.8 bits (151), Expect = 3e-10
Identities = 76/219 (34%), Positives = 78/219 (35%), Gaps = 39/219 (17%)
Query: 26 PEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPAELDG 85
P P G PP L G PP L G G PP L G G PP L G
Sbjct: 977 PPPPLPGAGIPPPPPLP---GAGIPPPPPLPGA---GIPPPPPLPGA---GIPPPPPLPG 1027
Query: 86 QMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDG 145
G PP L G G PP L G G PP L G G PP L G
Sbjct: 1028 ---AGIPPPPPLPG---AGIPPPPPLPG---AGIPPPPPLPG---AGIPPPPPLPG---A 1072
Query: 146 GSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRP 205
G PP L G G PP L G G PP L G G PP L G G P
Sbjct: 1073 GIPPPPPLPG---AGIPPPPPLPG---AGIPPPPPLPG---VGIPPPPPLPG---AGIPP 1120
Query: 206 PAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPP 244
P L G G PP L G P + +P PPP
Sbjct: 1121 PPPLPGA---GIPPPPPLPGAGIPPPPPLPRVGIPPPPP 1156
Score = 32.0 bits (71), Expect = 0.60
Identities = 64/254 (25%), Positives = 81/254 (31%), Gaps = 54/254 (21%)
Query: 1 MDGWIERGNCPPAQLDGRTGEPNSAPEPRWMDKGSC--PPAELDRQMDRGSHPPAELDGQ 58
+DG R CPP S P+ ++ + S P + Q+D SH P +
Sbjct: 760 VDGLPGRPPCPPGA--------ESGPQTKFCSEISLIVSPRRISVQLD--SHQPTQ---S 806
Query: 59 MDRGSRPPAEL--DGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMD 116
+ + PP+ L GQ GS PP + + + P L
Sbjct: 807 ISQPPPPPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPL----- 861
Query: 117 GGSRPPAELDGQMDG-GSRPPAELDGQMDGGSRPPAELDGQM-----DTGSRPPAELDGQ 170
P E M G G PP PP L G T P L G
Sbjct: 862 ----PCTESSSSMPGLGMVPP------------PPPPLPGMTVPTLPSTAIPQPPPLQGT 905
Query: 171 MDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTG 230
+ PP L G G PP L G G P L G G PP L G
Sbjct: 906 -EMLPPPPPPLPG---AGIPPPPPLPG---AGILPLPPLPGA---GIPPPPPLPGAAIPP 955
Query: 231 SRPPAELALPMPPP 244
P +P+PPP
Sbjct: 956 PPPLPGAGIPLPPP 969
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 58.2 bits (139), Expect = 8e-09
Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 51/259 (19%)
Query: 11 PPAQLDGRTGEPNSAPEPRWMDKGSCPPA--ELDRQMDRGSHPPAELDGQMDRGSRPPAE 68
PPAQ G + P P+ + + PP + Q + PP + G +P A+
Sbjct: 371 PPAQQTGSEKPSSEQPGPKALAQ---PPGVGKTPAQQPGPAKPPTQQVGT----PKPLAQ 423
Query: 69 LDGQMDRGSHP-PAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDG 127
G P P + Q G + PA+ G PG+ Q G ++PP++L G
Sbjct: 424 QPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAG--------PGKTSAQQTGPTKPPSQLPG 475
Query: 128 ------QMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAEL 181
Q G ++PP Q G ++PP++ G ++PP + G PA+
Sbjct: 476 PAKPPPQQPGPAKPPP----QQPGSAKPPSQQPGS----TKPPPQQPG--------PAKP 519
Query: 182 DGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPM 241
Q ++PP++ G ++ P+ + ++P ++ TGS P +
Sbjct: 520 SPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQ------TGSGKPLQ----- 568
Query: 242 PPPEMLQLGAPHVQGAGDT 260
PP P QG T
Sbjct: 569 PPTVSPSAKQPPSQGLPKT 587
Score = 55.1 bits (131), Expect = 7e-08
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 27/240 (11%)
Query: 19 TGEPNSAP-EPRWMDKGSCPPAELDRQMDRGSHPPAEL-DGQMDRGSRP-PAELDGQMDR 75
TG+P P + D P L R R A++ G+ + S P P++ Q
Sbjct: 254 TGKPIQGPTQTPQTDHAKLP---LQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 76 GSHPPAELDGQ---MDGGSRPPAELDGQMDGGSRPPGELDG--QMDGGSRPPAELDGQMD 130
PPA+ G G ++PPA+ G ++ PG + Q G ++PPA Q
Sbjct: 311 PGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA----QPL 366
Query: 131 GGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPA-ELDGQMDTGSRPPAELDGQ----- 184
G ++PPA Q G +P +E G P + Q ++PP + G
Sbjct: 367 GPAKPPA----QQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLA 422
Query: 185 MDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPP 244
G + PA+ G T T + P G++ P + Q ++PP++L P PP
Sbjct: 423 QQPGLQSPAKAPGPTKTPVQQPGP--GKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPP 480
Score = 47.4 bits (111), Expect = 1e-05
Identities = 55/203 (27%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 51 PPAELDGQMDRGSRPPAELDGQMDR-GSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPG 109
PP + Q G R P + DG S P ++ Q G +P + G
Sbjct: 215 PPKPIPKQQGPG-RDPLQQDGTPKSISSQQPEKIKSQPPGTGKP---IQGPTQTPQTDHA 270
Query: 110 ELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDG 169
+L Q D SRP + + G S P+ + S+PP Q T +PPA+ G
Sbjct: 271 KLPLQRDA-SRPQTKQADIVRGESVKPS-----LPSPSKPPI----QQPTPGKPPAQQPG 320
Query: 170 QMDTG---SRPPAELDG------QMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPP 220
+ ++PPA+ G Q +PP + G T +PPA+ G ++PP
Sbjct: 321 HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTT----KPPAQPLGP----AKPP 372
Query: 221 AELDGQMDTGSRPPAELALPMPP 243
A+ G S P AL PP
Sbjct: 373 AQQTGSEKPSSEQPGPKALAQPP 395
Score = 33.1 bits (74), Expect = 0.27
Identities = 48/234 (20%), Positives = 82/234 (35%), Gaps = 13/234 (5%)
Query: 15 LDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMD 74
L G S+P+P K P + + S P + + D + P +L +
Sbjct: 646 LGGDLAPVPSSPQP----KLKTAPVTTTSAVSKSSPQPQQTSPKKD--AAPKQDLSKAPE 699
Query: 75 RGSHPPAELDGQMDGGSRPPAELDGQMDGGSRP--PGELDGQMDGGSRPPAELDGQMDGG 132
PP + G A+ + D S+P P E + P A+ +
Sbjct: 700 PKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKM 759
Query: 133 SRPPAELDGQMDGGSRPP---AELDGQMDTGSRPPAELDGQMDTGSRPP-AELDGQMDTG 188
+P +L ++P +++ Q + + PP + D + S PP E D+
Sbjct: 760 VKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSK 819
Query: 189 SRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMP 242
+ P D + + P +E GQ E + T P + A PMP
Sbjct: 820 AIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPD-AKPMP 872
Score = 28.5 bits (62), Expect = 6.7
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 172 DTGSRPPA--ELDGQMDTGSRPPAELDGQTDTGSRPPAEL-DGQMDRGSRPPAELDGQMD 228
D PPA + M P L D SR P + +G +GS+
Sbjct: 3660 DMAKVPPASPKTAKMMQRSMSDPKPLSPTADESSRAPFQYTEGYTTKGSQT------MTS 3713
Query: 229 TGSRPPAELALPMPPPEMLQLG 250
+G++ + LP PPPE + G
Sbjct: 3714 SGAQKKVKRTLPNPPPEEISTG 3735
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 58.2 bits (139), Expect = 8e-09
Identities = 61/259 (23%), Positives = 101/259 (38%), Gaps = 51/259 (19%)
Query: 11 PPAQLDGRTGEPNSAPEPRWMDKGSCPPA--ELDRQMDRGSHPPAELDGQMDRGSRPPAE 68
PPAQ G + P P+ + + PP + Q + PP + G +P A+
Sbjct: 371 PPAQQTGSEKPSSEQPGPKALAQ---PPGVGKTPAQQPGPAKPPTQQVGT----PKPLAQ 423
Query: 69 LDGQMDRGSHP-PAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDG 127
G P P + Q G + PA+ G PG+ Q G ++PP++L G
Sbjct: 424 QPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAG--------PGKTSAQQTGPTKPPSQLPG 475
Query: 128 ------QMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAEL 181
Q G ++PP Q G ++PP++ G ++PP + G PA+
Sbjct: 476 PAKPPPQQPGPAKPPP----QQPGSAKPPSQQPGS----TKPPPQQPG--------PAKP 519
Query: 182 DGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPM 241
Q ++PP++ G ++ P+ + ++P ++ TGS P +
Sbjct: 520 SPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQ------TGSGKPLQ----- 568
Query: 242 PPPEMLQLGAPHVQGAGDT 260
PP P QG T
Sbjct: 569 PPTVSPSAKQPPSQGLPKT 587
Score = 55.1 bits (131), Expect = 7e-08
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 27/240 (11%)
Query: 19 TGEPNSAP-EPRWMDKGSCPPAELDRQMDRGSHPPAEL-DGQMDRGSRP-PAELDGQMDR 75
TG+P P + D P L R R A++ G+ + S P P++ Q
Sbjct: 254 TGKPIQGPTQTPQTDHAKLP---LQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPT 310
Query: 76 GSHPPAELDGQ---MDGGSRPPAELDGQMDGGSRPPGELDG--QMDGGSRPPAELDGQMD 130
PPA+ G G ++PPA+ G ++ PG + Q G ++PPA Q
Sbjct: 311 PGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA----QPL 366
Query: 131 GGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPA-ELDGQMDTGSRPPAELDGQ----- 184
G ++PPA Q G +P +E G P + Q ++PP + G
Sbjct: 367 GPAKPPA----QQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLA 422
Query: 185 MDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPP 244
G + PA+ G T T + P G++ P + Q ++PP++L P PP
Sbjct: 423 QQPGLQSPAKAPGPTKTPVQQPGP--GKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPP 480
Score = 47.4 bits (111), Expect = 1e-05
Identities = 55/203 (27%), Positives = 80/203 (39%), Gaps = 32/203 (15%)
Query: 51 PPAELDGQMDRGSRPPAELDGQMDR-GSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPG 109
PP + Q G R P + DG S P ++ Q G +P + G
Sbjct: 215 PPKPIPKQQGPG-RDPLQQDGTPKSISSQQPEKIKSQPPGTGKP---IQGPTQTPQTDHA 270
Query: 110 ELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDG 169
+L Q D SRP + + G S P+ + S+PP Q T +PPA+ G
Sbjct: 271 KLPLQRDA-SRPQTKQADIVRGESVKPS-----LPSPSKPPI----QQPTPGKPPAQQPG 320
Query: 170 QMDTG---SRPPAELDG------QMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPP 220
+ ++PPA+ G Q +PP + G T +PPA+ G ++PP
Sbjct: 321 HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTT----KPPAQPLGP----AKPP 372
Query: 221 AELDGQMDTGSRPPAELALPMPP 243
A+ G S P AL PP
Sbjct: 373 AQQTGSEKPSSEQPGPKALAQPP 395
Score = 33.1 bits (74), Expect = 0.27
Identities = 48/234 (20%), Positives = 82/234 (35%), Gaps = 13/234 (5%)
Query: 15 LDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMD 74
L G S+P+P K P + + S P + + D + P +L +
Sbjct: 646 LGGDLAPVPSSPQP----KLKTAPVTTTSAVSKSSPQPQQTSPKKD--AAPKQDLSKAPE 699
Query: 75 RGSHPPAELDGQMDGGSRPPAELDGQMDGGSRP--PGELDGQMDGGSRPPAELDGQMDGG 132
PP + G A+ + D S+P P E + P A+ +
Sbjct: 700 PKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKM 759
Query: 133 SRPPAELDGQMDGGSRPP---AELDGQMDTGSRPPAELDGQMDTGSRPP-AELDGQMDTG 188
+P +L ++P +++ Q + + PP + D + S PP E D+
Sbjct: 760 VKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSK 819
Query: 189 SRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMP 242
+ P D + + P +E GQ E + T P + A PMP
Sbjct: 820 AIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPD-AKPMP 872
Score = 28.5 bits (62), Expect = 6.7
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 172 DTGSRPPA--ELDGQMDTGSRPPAELDGQTDTGSRPPAEL-DGQMDRGSRPPAELDGQMD 228
D PPA + M P L D SR P + +G +GS+
Sbjct: 3660 DMAKVPPASPKTAKMMQRSMSDPKPLSPTADESSRAPFQYTEGYTTKGSQT------MTS 3713
Query: 229 TGSRPPAELALPMPPPEMLQLG 250
+G++ + LP PPPE + G
Sbjct: 3714 SGAQKKVKRTLPNPPPEEISTG 3735
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 55.5 bits (132), Expect = 5e-08
Identities = 78/272 (28%), Positives = 99/272 (36%), Gaps = 58/272 (21%)
Query: 9 NCPPAQLDGRTGEPNS-APEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPA 67
N PP + G G P+ A P GS P E+ S PP E+ GS P
Sbjct: 271 NAPPLWVPGAIGSPSQEAVRPPSNFTGSSPWMEI-------SGPPFEI------GSAPAG 317
Query: 68 ELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDG 127
D ++ S PP LDG PP ++ G D R RPP E +
Sbjct: 318 VDDTPVNMDS-PPIALDG-------PPIKVSGAPDKRER-----------AERPPVEEEA 358
Query: 128 QMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRP--------PA 179
G+ AE G PA DT +R D+G+ P PA
Sbjct: 359 AEMEGAADAAEGGKVPSPGYGSPAAGAASADTAARAAPAAPADPDSGATPEDPDSGTAPA 418
Query: 180 ELD-----GQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPP 234
+ D D+G+ P A D D+G+ P A D D G+ P A D D G+ P
Sbjct: 419 DPDSGAFAADPDSGAAPAAPAD--PDSGAAPDAPAD--PDSGAAPDAPAD--PDAGAAPE 472
Query: 235 AELALPMPPPEMLQLGAPHV-QGAGDTGHSAA 265
A A P + A HV A D G A
Sbjct: 473 APAA-----PAAAETRAAHVAPAAPDAGAPTA 499
Score = 35.4 bits (80), Expect = 0.054
Identities = 78/328 (23%), Positives = 101/328 (30%), Gaps = 113/328 (34%)
Query: 8 GNCPPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPA 67
G P +++ T P++ P P D +C P E+ R + +P G S PP
Sbjct: 42 GPSPAEEME--TEPPHNEPIPVENDGEACGPPEVSRPNFQVLNPAFREAGAHGSYSPPPE 99
Query: 68 E----------LDGQMDRGSHP--------------PAELDGQMDGGSRP---------- 93
E L G P PA ++ G+RP
Sbjct: 100 EAMPFEAEQPSLGGFWPTLEQPGFPSGVHAGLEAFGPALMEPGAFSGARPGLGGYSPPPE 159
Query: 94 ---PAELDGQMDGG----------------------SRPPGELD-------GQMDGGSRP 121
P E D G PP E G G S P
Sbjct: 160 EAMPFEFDQPAQRGCSQLLLQVPDLAPGGPGAAGVPGAPPEEPQALRPAKAGSRGGYSPP 219
Query: 122 PA-----ELDGQMDGGSRPPAELD---GQMDGGSR------------------PPAELDG 155
P ELDG+ G PP L Q+DG S+ PP + G
Sbjct: 220 PEETMPFELDGEGFGDDSPPPGLSRVIAQVDGSSQFAAVAASSAVRLTPAANAPPLWVPG 279
Query: 156 QMDTGS----RPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDG 211
+ + S RPP+ TGS P E+ G PA +D PP LDG
Sbjct: 280 AIGSPSQEAVRPPSNF-----TGSSPWMEISGPPFEIGSAPAGVDDTPVNMDSPPIALDG 334
Query: 212 QMDRGSRPPAELDGQMD---TGSRPPAE 236
PP ++ G D RPP E
Sbjct: 335 -------PPIKVSGAPDKRERAERPPVE 355
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 53.5 bits (127), Expect = 2e-07
Identities = 69/271 (25%), Positives = 91/271 (33%), Gaps = 53/271 (19%)
Query: 11 PPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSR------ 64
PP Q D ++ P S P K PP + Q PP + G +G
Sbjct: 80 PPPQGD-KSRSPRSPP-----GKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPP 133
Query: 65 PPAELDGQMDRG--SHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSR-- 120
PP + G +G S P G+ G PP + Q G PPG+ G G +
Sbjct: 134 PPGKPQGPPPQGDKSRSPRSPPGKPQG---PPPQGGNQPQGPPPPPGKPQGPPPQGGKKP 190
Query: 121 ----PPAELDGQMDGGSR-------------PPAELDGQMDGGSRPPAELDGQMDTGSRP 163
PP + G G + PP + Q G PP + G G
Sbjct: 191 QGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 250
Query: 164 PAELDGQMDTG--SRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPA 221
P G G PPA+ + + PP + G P + +G +G PPA
Sbjct: 251 P---QGPPPPGKPQGPPAQGGSKSQSARSPPGKPQG--------PPQQEGNNPQGPPPPA 299
Query: 222 ELDGQMDTGSRPPAELALPMPPPEMLQLGAP 252
G PPA P PP Q G P
Sbjct: 300 --GGNPQQPQAPPA--GQPQGPPRPPQGGRP 326
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 51.2 bits (121), Expect = 1e-06
Identities = 65/266 (24%), Positives = 88/266 (33%), Gaps = 33/266 (12%)
Query: 20 GEPNSAPEPRW-MDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSH 78
G S PEP+ D S AE D + AE Q D ++ AE Q S
Sbjct: 52 GSTKSHPEPQTPKDSPSKSSAEAQTPEDTPNKSGAEAKTQKDSSNKSGAEAKTQKGSTSK 111
Query: 79 PPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAE 138
+E D S+ EL D + E D +R AE Q D S+ +E
Sbjct: 112 SGSEAQTTKDSTSKSHPELQTPKDSTGKSGAEAQTPEDSPNRSGAEAKTQKDSPSKSGSE 171
Query: 139 L------------DGQM--DGGSRPPAELDGQMDTGSRPPAEL----DGQMDTGSRPPAE 180
DGQ DG S+ AE D ++ AE DG +G+
Sbjct: 172 AQTTKDVPNKSGADGQTPKDGSSKSGAEDQTPKDVPNKSGAEKQTPKDGSNKSGAEEQGP 231
Query: 181 LDGQMDTGSRPPAELDGQTDTGSRPPAELD------GQMDRGSRPPAELDGQMDTGSRPP 234
+DG +G+ D P+ D D P A+ + D G P
Sbjct: 232 IDGPSKSGAEEQTSKDSPNKVVPEQPSRKDHSKPISNPSDNKELPKADTNQLADKGKLSP 291
Query: 235 --------AELALPMPPPEMLQLGAP 252
E L PP E ++ P
Sbjct: 292 HAFKTESGEETDLISPPQEEVKSSEP 317
Score = 46.6 bits (109), Expect = 2e-05
Identities = 51/212 (24%), Positives = 81/212 (38%), Gaps = 10/212 (4%)
Query: 39 AELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELD 98
A+ + SHP EL D + AE D + AE Q D S+ +E
Sbjct: 116 AQTTKDSTSKSHP--ELQTPKDSTGKSGAEAQTPEDSPNRSGAEAKTQKDSPSKSGSEAQ 173
Query: 99 GQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMD 158
D ++ + DG S+ AE D ++ AE DG ++ AE G +D
Sbjct: 174 TTKDVPNKSGADGQTPKDGSSKSGAEDQTPKDVPNKSGAEKQTPKDGSNKSGAEEQGPID 233
Query: 159 TGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSR 218
S+ AE D+ ++ E + D S+P + +D P A+ + D+G
Sbjct: 234 GPSKSGAEEQTSKDSPNKVVPEQPSRKD-HSKP---ISNPSDNKELPKADTNQLADKGKL 289
Query: 219 PP----AELDGQMDTGSRPPAELALPMPPPEM 246
P E + D S P E+ P ++
Sbjct: 290 SPHAFKTESGEETDLISPPQEEVKSSEPTEDV 321
Score = 46.6 bits (109), Expect = 2e-05
Identities = 53/209 (25%), Positives = 75/209 (35%), Gaps = 8/209 (3%)
Query: 32 DKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGS 91
D S EL D AE D +R AE Q D S +E D +
Sbjct: 121 DSTSKSHPELQTPKDSTGKSGAEAQTPEDSPNRSGAEAKTQKDSPSKSGSEAQTTKDVPN 180
Query: 92 RPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPA 151
+ A+ DG S+ E D ++ AE DG ++ AE G +DG S+ A
Sbjct: 181 KSGADGQTPKDGSSKSGAEDQTPKDVPNKSGAEKQTPKDGSNKSGAEEQGPIDGPSKSGA 240
Query: 152 ELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPP----A 207
E D+ ++ E + D S+P + D P A+ + D G P
Sbjct: 241 EEQTSKDSPNKVVPEQPSRKD-HSKP---ISNPSDNKELPKADTNQLADKGKLSPHAFKT 296
Query: 208 ELDGQMDRGSRPPAELDGQMDTGSRPPAE 236
E + D S P E+ T P E
Sbjct: 297 ESGEETDLISPPQEEVKSSEPTEDVEPKE 325
Score = 40.4 bits (93), Expect = 0.002
Identities = 53/235 (22%), Positives = 72/235 (30%), Gaps = 17/235 (7%)
Query: 12 PAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDG 71
P G++G PE G+ + D GS D G+ DG
Sbjct: 133 PKDSTGKSGAEAQTPEDSPNRSGAEAKTQKDSPSKSGSEAQTTKDVPNKSGADGQTPKDG 192
Query: 72 QMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDG 131
G+ D G+ DG G+ G +DG G+ D
Sbjct: 193 SSKSGAEDQTPKDVPNKSGAEKQTPKDGSNKSGAEEQGPIDGPSKSGAEEQTSKDSPNKV 252
Query: 132 GSRPPAELD------GQMDGGSRPPAELDGQMDTGSRPP----AELDGQMDTGSRPPAEL 181
P+ D D P A+ + D G P E + D S P E+
Sbjct: 253 VPEQPSRKDHSKPISNPSDNKELPKADTNQLADKGKLSPHAFKTESGEETDLISPPQEEV 312
Query: 182 DGQMDTGSRPPAELDGQTDTG---SRPPAELDGQMDRGSRPPAELDGQM--DTGS 231
T P E + DTG PP E +M GS +G + TGS
Sbjct: 313 KSSEPTEDVEPKEAE-DDDTGPEEGSPPKEEKEKMS-GSASSENREGTLSDSTGS 365
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 50.8 bits (120), Expect = 1e-06
Identities = 59/227 (25%), Positives = 80/227 (35%), Gaps = 35/227 (15%)
Query: 21 EPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPP 80
+P P P +G PP + + +G PP + G PP + D + PP
Sbjct: 128 QPQGPPPPPGKPQG--PPPQGGNK-PQGPPPPGKPQG-------PPPQGDNKSRSSRSPP 177
Query: 81 AELDGQMDGGSRPPAELDGQMDGGSRPPGELDG-QMDGGSRPPA-ELDGQMDGGSRPPAE 138
+ G PP + Q G PPG+ G GG++P G+ G PP +
Sbjct: 178 GKPQG-------PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQ 227
Query: 139 LDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQ 198
D + PP + G G P PP + G G PP + G
Sbjct: 228 GDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ-GGNKPQGPPPPGKPQG- 285
Query: 199 TDTGSRPPAELDGQMDRGSR-PPAELDGQMDTGSRPPAELALPMPPP 244
PP + G R SR PP + G G P P PPP
Sbjct: 286 ------PPPQ-GGSKSRSSRSPPGKPQGPPPQGGNQPQG---PPPPP 322
Score = 50.1 bits (118), Expect = 2e-06
Identities = 62/247 (25%), Positives = 86/247 (34%), Gaps = 40/247 (16%)
Query: 21 EPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPP 80
+P P P +G PP + + +G PP + G +G + PP
Sbjct: 190 QPQGPPPPPGKPQG--PPPQGGNK-PQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPP 246
Query: 81 AELDGQMDGGSRPPAELDG-QMDGGSR-----PPGELDG-QMDGGSR------PPAELDG 127
+ Q G PP + G GG++ PPG+ G GGS+ PP + G
Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQG 306
Query: 128 QMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTG--SRPPAELDGQM 185
PP + Q G PP + G G P G G PP + +
Sbjct: 307 -------PPPQGGNQPQGPPPPPGKPQGPPPQGGNKP---QGPPPPGKPQGPPPQGGSKS 356
Query: 186 DTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPPE 245
+ PP + G P + +G +G PPA G PPA P PP
Sbjct: 357 RSARSPPGKPQG--------PPQQEGNNPQGPPPPA--GGNPQQPQAPPA--GQPQGPPR 404
Query: 246 MLQLGAP 252
Q G P
Sbjct: 405 PPQGGRP 411
Score = 40.8 bits (94), Expect = 0.001
Identities = 44/160 (27%), Positives = 57/160 (35%), Gaps = 29/160 (18%)
Query: 93 PPAELDGQMDGGSRPPGELDG-QMDGGSR-----PPAELDGQMDGG--SRPPAELDGQMD 144
PP + Q G PPG+ G GG++ PP + G G SR P G+
Sbjct: 60 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ 119
Query: 145 GGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSR 204
G PP + Q PP + G PP + G G PP + G
Sbjct: 120 G---PPPQGGNQPQGPPPPPGKPQG-------PPPQ-GGNKPQGPPPPGKPQG------- 161
Query: 205 PPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPP 244
PP + D + PP + G G P P PPP
Sbjct: 162 PPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQG---PPPPP 198
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 50.1 bits (118), Expect = 2e-06
Identities = 56/235 (23%), Positives = 82/235 (34%), Gaps = 46/235 (19%)
Query: 21 EPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRG---SRPPAELDGQMDRGS 77
+P P P +G PP + Q PP + +G+ +G S+ P G+ +R
Sbjct: 46 QPQRPPPPPGKPQG--PPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPER-- 101
Query: 78 HPPAELDGQMDG-------GSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMD 130
PP + Q G RPP + Q PPG+ + RPP + Q
Sbjct: 102 -PPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPE-------RPPPQGGNQSQ 153
Query: 131 GGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSR 190
G P + +G PP + + + PP + G P + +G G
Sbjct: 154 GPPPHPGKPEG-------PPPQEGNKSRSARSPPGKPQG--------PPQQEGNKPQGPP 198
Query: 191 PPAELDGQTDTGSRP--PAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPP 243
PP + G G P P +G PP + G RPP PP
Sbjct: 199 PPGKPQGPPPAGGNPQQPQAPPAGKPQGPPPPPQ-------GGRPPRPAQGQQPP 246
Score = 44.3 bits (103), Expect = 1e-04
Identities = 47/201 (23%), Positives = 73/201 (36%), Gaps = 23/201 (11%)
Query: 56 DGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGG---SRPPGELD 112
+G+ +G P + PP + Q G PP + +G+ G S+ P
Sbjct: 37 EGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHP 96
Query: 113 GQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMD 172
G+ + RPP + Q G PP + + RPP + Q PP + +
Sbjct: 97 GKPE---RPPPQGGNQSQGTPPPPGKPE-------RPPPQGGNQSHRPPPPPGKPERPPP 146
Query: 173 TG---SRPPAELDGQMDTGSRPPAELDGQTDTGSRP-----PAELDGQMDRGSRPPAELD 224
G S+ P G+ + PP E + S P P + +G +G PP +
Sbjct: 147 QGGNQSQGPPPHPGKPE--GPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQ 204
Query: 225 GQMDTGSRPPAELALPMPPPE 245
G G P A P P+
Sbjct: 205 GPPPAGGNPQQPQAPPAGKPQ 225
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 47.4 bits (111), Expect = 1e-05
Identities = 58/186 (31%), Positives = 69/186 (37%), Gaps = 29/186 (15%)
Query: 12 PAQLDGRTG-EPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELD 70
P + G G N P P+ M G PP E+ RG HPP L G + R P E+
Sbjct: 781 PRGMQGPPGPRENQGPAPQGMIMGH-PPQEM-----RGPHPPGGLLGHGPQEMRGPQEIR 834
Query: 71 GQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSR---PPGELDGQMDGGSRPPAELDG 127
G PP + G M G PP EL G S+ P G L GG + P G
Sbjct: 835 GMQG----PPPQ--GSMLG---PPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGPQG 885
Query: 128 QMDGGSRP-----PAELDGQ----MDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPP 178
Q + P P Q + G R P +GQ TG P GQ R P
Sbjct: 886 QQNPARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQ-STGPPPLIPGLGQQGAQGRIP 944
Query: 179 AELDGQ 184
GQ
Sbjct: 945 PLNPGQ 950
Score = 36.2 bits (82), Expect = 0.032
Identities = 68/252 (26%), Positives = 86/252 (34%), Gaps = 35/252 (13%)
Query: 17 GRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRG 76
G G P P P+ M + M R P L Q G + + G M G
Sbjct: 657 GPQGPPQGLPRPQDMHG--------PQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHM--G 706
Query: 77 SHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSR----PPAELDGQMDGG 132
P G + G + P G + G PPG Q G R PP Q G
Sbjct: 707 PQGPPGPQGHI--GPQGPPGPQGHL-GPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPG 763
Query: 133 SRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTG---SRPPAELDGQMDTGS 189
S+ + G + G P L+ + G P E G G PP E+ G
Sbjct: 764 SQG---IQGPVSQG--PLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEM-----RGP 813
Query: 190 RPPAELDGQTDTGSRPPAELDGQMD---RGSR--PPAELDGQMDTGSRPPAELALPMPPP 244
PP L G R P E+ G +GS PP EL G + S+ PPP
Sbjct: 814 HPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPP 873
Query: 245 EMLQLGAPHVQG 256
+ G P QG
Sbjct: 874 QGGMQGPPGPQG 885
Score = 34.7 bits (78), Expect = 0.093
Identities = 60/217 (27%), Positives = 79/217 (36%), Gaps = 26/217 (11%)
Query: 61 RGSRPPAELDGQ--MDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGG 118
+G P ++ G M R P L Q G + + G M G PPG Q G
Sbjct: 663 QGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHM-GPQGPPGP---QGHIG 718
Query: 119 SRPPAELDGQMDGGSRPPAELDGQMDGGSR----PPAELDGQMDTGSRPPAELDGQMDTG 174
+ P G + G PP Q G R PP Q GS+ + G + G
Sbjct: 719 PQGPPGPQGHL-GPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQG---IQGPVSQG 774
Query: 175 SRPPAELDGQMDTGSRPPAELDGQTDTG---SRPPAELDGQMDRGSRPPAELDGQMDTGS 231
P L+ + G P E G G PP E+ RG PP L G
Sbjct: 775 --PLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEM-----RGPHPPGGLLGHGPQEM 827
Query: 232 RPPAEL-ALPMPPPEMLQLGAPHVQGAGDTGHSAARG 267
R P E+ + PPP+ LG P + G G + +G
Sbjct: 828 RGPQEIRGMQGPPPQGSMLGPPQ-ELRGPPGSQSQQG 863
>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
Length = 562
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 13/177 (7%)
Query: 32 DKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGS 91
+K + P Q D+G PAE D G P E + HP + + ++
Sbjct: 8 EKPAIAPPVFVFQKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHALE--- 64
Query: 92 RPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDG-QMDGGSRPP 150
PPA + PP + Q+ P EL G+ GGS P D + DG PP
Sbjct: 65 -PPAPAGA--SASTPPPPAPEAQLPPF---PRELAGRSAGGSSPEGGEDSDREDGNYCPP 118
Query: 151 AELDGQMDTGSRPPAELDGQMDTGSR--PPAELDGQMDTGSRPPAELDGQTDTGSRP 205
+ + PP++ + + +G R PP + GQ + P + Q + RP
Sbjct: 119 VKRERTSSLTQFPPSQSE-ERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLRP 174
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 20/175 (11%)
Query: 86 QMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDG 145
Q D G + PAE D G P GE + G P + + ++ PPA
Sbjct: 20 QKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHALE----PPAPAGA--SA 73
Query: 146 GSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSR-PPAELDGQTDTGSR 204
+ PP + Q+ P EL G+ GS P D + G+ PP + + +
Sbjct: 74 STPPPPAPEAQLPPF---PRELAGRSAGGSSPEGGEDSDREDGNYCPPVKRERTSSLTQF 130
Query: 205 PPAELDGQMDRGS----RPPAELDGQMDTGSRP---PAELALPMPPPEMLQLGAP 252
PP++ + +R S +PP + GQ + P P E + P +LQ P
Sbjct: 131 PPSQSE---ERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQP 182
Score = 45.4 bits (106), Expect = 5e-05
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 58 QMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDG 117
Q D+G + PAE D G P E + G P + + ++ PP
Sbjct: 20 QKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHALE----PPAPAGA--SA 73
Query: 118 GSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSR-PPAELDGQMDTGSR 176
+ PP + Q+ P EL G+ GGS P D + G+ PP + +
Sbjct: 74 STPPPPAPEAQLPPF---PRELAGRSAGGSSPEGGEDSDREDGNYCPPVKRERTSSLTQF 130
Query: 177 PPAELDGQMDTGSR--PPAELDGQTDTGSRPPAELDGQMDRGSRP 219
PP++ + + +G R PP + GQ + P + Q RP
Sbjct: 131 PPSQSE-ERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLRP 174
>gi|6466466 RAN binding protein 3 isoform RANBP3-d [Homo sapiens]
Length = 567
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 13/177 (7%)
Query: 32 DKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGS 91
+K + P Q D+G PAE D G P E + HP + + ++
Sbjct: 8 EKPAIAPPVFVFQKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHALE--- 64
Query: 92 RPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDG-QMDGGSRPP 150
PPA + PP + Q+ P EL G+ GGS P D + DG PP
Sbjct: 65 -PPAPAGA--SASTPPPPAPEAQLPPF---PRELAGRSAGGSSPEGGEDSDREDGNYCPP 118
Query: 151 AELDGQMDTGSRPPAELDGQMDTGSR--PPAELDGQMDTGSRPPAELDGQTDTGSRP 205
+ + PP++ + + +G R PP + GQ + P + Q + RP
Sbjct: 119 VKRERTSSLTQFPPSQSE-ERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLRP 174
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 20/175 (11%)
Query: 86 QMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDG 145
Q D G + PAE D G P GE + G P + + ++ PPA
Sbjct: 20 QKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHALE----PPAPAGA--SA 73
Query: 146 GSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSR-PPAELDGQTDTGSR 204
+ PP + Q+ P EL G+ GS P D + G+ PP + + +
Sbjct: 74 STPPPPAPEAQLPPF---PRELAGRSAGGSSPEGGEDSDREDGNYCPPVKRERTSSLTQF 130
Query: 205 PPAELDGQMDRGS----RPPAELDGQMDTGSRP---PAELALPMPPPEMLQLGAP 252
PP++ + +R S +PP + GQ + P P E + P +LQ P
Sbjct: 131 PPSQSE---ERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQP 182
Score = 45.4 bits (106), Expect = 5e-05
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 13/165 (7%)
Query: 58 QMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDG 117
Q D+G + PAE D G P E + G P + + ++ PP
Sbjct: 20 QKDKGQKSPAEQKNLSDSGEEPRGEAEAPHHGTGHPESAGEHALE----PPAPAGA--SA 73
Query: 118 GSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSR-PPAELDGQMDTGSR 176
+ PP + Q+ P EL G+ GGS P D + G+ PP + +
Sbjct: 74 STPPPPAPEAQLPPF---PRELAGRSAGGSSPEGGEDSDREDGNYCPPVKRERTSSLTQF 130
Query: 177 PPAELDGQMDTGSR--PPAELDGQTDTGSRPPAELDGQMDRGSRP 219
PP++ + + +G R PP + GQ + P + Q RP
Sbjct: 131 PPSQSE-ERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQRSVLRP 174
>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
Length = 673
Score = 46.2 bits (108), Expect = 3e-05
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 22/218 (10%)
Query: 58 QMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGE--LDGQM 115
+++ SR AE G G P ++ +++G R E D + G E L +
Sbjct: 431 KLELESRGSAEKLGTEREGGEEPLGIERKVEGHLRAEKEGDEEKRGAEEEEVEEPLGVEK 490
Query: 116 DGGSRPPAE----LDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQM 171
GG P L+ + GG L+ + GG ++T E D +
Sbjct: 491 KGGEEEPEATKEPLEAERKGGEET---LEAEKRGGEE-------SLETEKTQGTEGDLNL 540
Query: 172 DTGSRPPAELDGQMDTGSRPPAELDGQT---DTGSRPPAELDGQM-DRGSRPPAELDGQM 227
+ GSR +E + + PP E + +T G +P + G + + G +P +GQ
Sbjct: 541 EQGSREGSESQAEEMNEAGPPLEANTETRPEKEGPQPQEKPVGALEEEGVKPQTAAEGQG 600
Query: 228 DTGSRPPAELALPMPPPEMLQLGAPHVQGAGDTGHSAA 265
G P L P PE P +QG G + + +A
Sbjct: 601 PLGDATP--LLAETPAPEQPAECQPLLQGEGPSANPSA 636
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 43.9 bits (102), Expect = 2e-04
Identities = 51/255 (20%), Positives = 100/255 (39%), Gaps = 36/255 (14%)
Query: 12 PAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDG 71
P+ L G P+ P P PP+++ + PP+++ PP+++
Sbjct: 150 PSLLSGVPSPPSDVPSPP--SDVPSPPSDVPSLLSGVPSPPSDVPSPPSDVPSPPSDVPL 207
Query: 72 QMDRGSHPPAELDGQMDGGSRPPAELDG------QMDGGSRPPGELDGQMDGGSRPPAEL 125
D S PP+++ D S PP+++ + G PP ++ + G PP+++
Sbjct: 208 LSDVPS-PPSDVPLLSDVPS-PPSDVPSLPSDVPSLSGVPSPPSDVPSLLSGVPSPPSDI 265
Query: 126 DGQMDGGS------RPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPA 179
D S P+++ + G PP+++ + PP+++ PP+
Sbjct: 266 SPPSDVPSLLSDVPSLPSDVPSLLSGVPSPPSDVPSLLSDVPSPPSDVPS-------PPS 318
Query: 180 ELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELAL 239
++ S PP+++ PP+++ L G S P +
Sbjct: 319 DIPLLSGVPS-PPSDVPSPPSDVPSPPSDV-----------PLLSGVPSPLSDVPLLSGV 366
Query: 240 PMPPPEMLQ-LGAPH 253
P PP ++ L +PH
Sbjct: 367 PSPPSDVPSLLMSPH 381
Score = 43.1 bits (100), Expect = 3e-04
Identities = 35/180 (19%), Positives = 74/180 (41%), Gaps = 9/180 (5%)
Query: 79 PPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAE 138
PP+++ + G P+++ ++ + G PP+++ PP++
Sbjct: 117 PPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPPSDVPSPPSD 176
Query: 139 LDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRP------P 192
+ + G PP+++ PP+++ D S PP+++ D S P P
Sbjct: 177 VPSLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSDVPS-PPSDVPLLSDVPSPPSDVPSLP 235
Query: 193 AELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPPEMLQLGAP 252
+++ + S PP+++ + PP+++ D S +LP P +L G P
Sbjct: 236 SDVPSLSGVPS-PPSDVPSLLSGVPSPPSDISPPSDVPSLLSDVPSLPSDVPSLLS-GVP 293
Score = 41.2 bits (95), Expect = 0.001
Identities = 29/167 (17%), Positives = 70/167 (41%), Gaps = 8/167 (4%)
Query: 87 MDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGG 146
+ G PP+++ + G P ++ +++ + G PP+++
Sbjct: 111 LSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPSPPSDVPSPPSDV 170
Query: 147 SRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPP 206
PP+++ + PP+++ PP+++ D S PP+++ +D S PP
Sbjct: 171 PSPPSDVPSLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSDVPS-PPSDVPLLSDVPS-PP 228
Query: 207 AELDG------QMDRGSRPPAELDGQMDTGSRPPAELALPMPPPEML 247
+++ + PP+++ + PP++++ P P +L
Sbjct: 229 SDVPSLPSDVPSLSGVPSPPSDVPSLLSGVPSPPSDISPPSDVPSLL 275
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 42.4 bits (98), Expect = 4e-04
Identities = 48/196 (24%), Positives = 68/196 (34%), Gaps = 29/196 (14%)
Query: 20 GEPNSAPEPRWMDKGSCPPAELDRQMDRGSHP---PAELDGQMDRGSRPPAELDGQMDRG 76
G+P P P ++G E ++ G P P E ++ G+ PP +
Sbjct: 484 GDPGEVPAPSPQERGEHLNTEQSHEVQPGVPPPPLPKEQSHEVQPGAPPPPLPKAPSESA 543
Query: 77 SHPPAELDG-QMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRP 135
PP DG ++ S PA GSR PG+ G + PP DGG
Sbjct: 544 RGPPGPTDGAKVHEDSTSPA----VAKEGSRSPGDSPGGKEEAPEPP-------DGGD-- 590
Query: 136 PAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAEL 195
P L G+ D Q + R P ++ S D ++PP +
Sbjct: 591 PGNLQGE-----------DSQAFSSKRDPEVGKDELSKPSSDAESRDHPSSHSAQPPRKG 639
Query: 196 D-GQTDTGSRPPAELD 210
G TD AE D
Sbjct: 640 GAGHTDGPHSQTAEAD 655
Score = 30.8 bits (68), Expect = 1.3
Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 7/126 (5%)
Query: 125 LDGQMDGGSRPPAELDGQMDGGSRPPAELDGQ--MDTGSRPPAELDGQMDTGSRPPA--- 179
+D + G R ++L + + P E+ + G E ++ G PP
Sbjct: 461 VDAGLVGLERQVSDLGSKGEHPEGDPGEVPAPSPQERGEHLNTEQSHEVQPGVPPPPLPK 520
Query: 180 ELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQM--DRGSRPPAELDGQMDTGSRPPAEL 237
E ++ G+ PP +++ PP DG + + P +G G P +
Sbjct: 521 EQSHEVQPGAPPPPLPKAPSESARGPPGPTDGAKVHEDSTSPAVAKEGSRSPGDSPGGKE 580
Query: 238 ALPMPP 243
P PP
Sbjct: 581 EAPEPP 586
Score = 29.6 bits (65), Expect = 3.0
Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 18/132 (13%)
Query: 118 GSRPPAELDGQMDGGSRPPAELDGQMDGG---SRPPAELDGQMDTGSRPPAELDGQMDT- 173
G + LD + G PPA G++ R L + G P++ GQ D+
Sbjct: 2198 GPKAACPLDSESAEGVVPPASGGGRVQNSPPVGRKTLPLTTAPEAGEVTPSDSGGQEDSP 2257
Query: 174 --GSRPPAELDGQMDTGS-------RPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELD 224
G E D D S PP + G +P A++ + + + P +LD
Sbjct: 2258 AKGLSVRLEFDYSEDKSSWDNQQENPPPTK-----KIGKKPVAKMPLRRPKMKKTPEKLD 2312
Query: 225 GQMDTGSRPPAE 236
+ R PAE
Sbjct: 2313 NTPASPPRSPAE 2324
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 41.2 bits (95), Expect = 0.001
Identities = 67/255 (26%), Positives = 90/255 (35%), Gaps = 31/255 (12%)
Query: 33 KGSCPPAELDRQMDRGSHPPAEL----DGQMDRGSRPPAELDGQMDRGSHPP-AELDGQM 87
K S P AEL +Q + + PA L R R L + G P + L +
Sbjct: 1526 KSSLPKAELFQQEQQSADKPASLPPASQASNHRDPRQARRLAAETGEGEGEPLSRLSARG 1585
Query: 88 DGGSRPPAELDGQMDG--GSRP---PGELDGQMD---GGSRPPAELDGQMDGGSRPPAEL 139
G+ P E D G G P P E + G +PPA + DG P E
Sbjct: 1586 AQGALP--ERDASRGGLVGQAPMPVPEEKEPASSPWASGEKPPA--GSEQDGWKAEPGE- 1640
Query: 140 DGQMDGGSRPPAELDGQMDTGSRP--PAELDGQMDTGSRPPAELDGQMDTGSRPP-AELD 196
G+RP D R P G + G P + DG+ D + P A D
Sbjct: 1641 ------GTRPATVGDSSARPARRVLLPTPPCGALQPGF--PLQHDGERDPFTCPGFASQD 1692
Query: 197 GQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPPEMLQLGA-PHVQ 255
+ R S P E +G + +R P E P+PPP G+ P Q
Sbjct: 1693 KALGSAQYEDPRNLHSAGRSSSPAGETEGDREPQAR-PGEGTAPLPPPGQKVGGSQPPFQ 1751
Query: 256 GAGDTGHSAARGEGM 270
G + G A G+
Sbjct: 1752 GQREPGPHALGMSGL 1766
Score = 29.6 bits (65), Expect = 3.0
Identities = 50/185 (27%), Positives = 66/185 (35%), Gaps = 31/185 (16%)
Query: 7 RGNCPPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRP- 65
RG PP+Q G+ G P ++ P++ + RG H P + +G RG P
Sbjct: 1904 RGGPPPSQFGGQRGPPPG----HFVGPRGPHPSQFETA--RGPH-PNQFEG--PRGQAPN 1954
Query: 66 ----PAELDGQM--DRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGS 119
P + Q D+ H P Q R PA L GS P E + Q
Sbjct: 1955 FMPGPRGIQPQQFEDQRVHSPPRFTNQ-----RAPAPLQFGGLRGSAPFSEKNEQTPSRF 2009
Query: 120 RPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPA 179
+ M G RP EL S PP + + PP+ L G P
Sbjct: 2010 HFQGQAPQVMKPGPRPLLELP------SHPPQHRKDRWEEAG-PPSALSSSA-PGQGP-- 2059
Query: 180 ELDGQ 184
E DGQ
Sbjct: 2060 EADGQ 2064
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 41.2 bits (95), Expect = 0.001
Identities = 45/155 (29%), Positives = 55/155 (35%), Gaps = 19/155 (12%)
Query: 40 ELDRQMDRGSHPPAELDG----QMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPA 95
+LD + + P DG Q R L GQ S P A Q DG + P
Sbjct: 18 DLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQ---SQPSAGDGNQNDGPQQGPP 74
Query: 96 ELDGQMDGGSRPP-GELDGQMDGGSRPP-----AELDGQMDGGSRPPAELDGQMDGGSRP 149
+ GQ G PP G+ G G PP + Q G RPP G+ G P
Sbjct: 75 QQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPR---GRPQG---P 128
Query: 150 PAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQ 184
P + Q PP + G G RP GQ
Sbjct: 129 PQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQ 163
Score = 34.3 bits (77), Expect = 0.12
Identities = 36/125 (28%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Query: 110 ELDGQMDGG--SRPPAELDGQMDGGSRPPAELDGQMDGGSRPP-AELDGQMDTGSRPP-- 164
E G GG S+P A Q DG + P + GQ G PP + G G PP
Sbjct: 45 ERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPP 104
Query: 165 -AELDGQMDTGS--RPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPA 221
G G RPP PP + Q PP + G +G RP
Sbjct: 105 QGRPQGPPQQGGHPRPP------RGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQG 158
Query: 222 ELDGQ 226
GQ
Sbjct: 159 PPQGQ 163
Score = 32.3 bits (72), Expect = 0.46
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 177 PPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPP-AELDGQMDTGSRPPA 235
PP L GQ S+P A Q D + P + GQ +G PP + G G PP
Sbjct: 49 PP--LGGQQ---SQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPP 103
Query: 236 ELALPMPPPE 245
P PP+
Sbjct: 104 PQGRPQGPPQ 113
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 41.2 bits (95), Expect = 0.001
Identities = 45/155 (29%), Positives = 55/155 (35%), Gaps = 19/155 (12%)
Query: 40 ELDRQMDRGSHPPAELDG----QMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPA 95
+LD + + P DG Q R L GQ S P A Q DG + P
Sbjct: 18 DLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQ---SQPSAGDGNQNDGPQQGPP 74
Query: 96 ELDGQMDGGSRPP-GELDGQMDGGSRPP-----AELDGQMDGGSRPPAELDGQMDGGSRP 149
+ GQ G PP G+ G G PP + Q G RPP G+ G P
Sbjct: 75 QQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPR---GRPQG---P 128
Query: 150 PAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQ 184
P + Q PP + G G RP GQ
Sbjct: 129 PQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQ 163
Score = 34.3 bits (77), Expect = 0.12
Identities = 36/125 (28%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Query: 110 ELDGQMDGG--SRPPAELDGQMDGGSRPPAELDGQMDGGSRPP-AELDGQMDTGSRPP-- 164
E G GG S+P A Q DG + P + GQ G PP + G G PP
Sbjct: 45 ERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPP 104
Query: 165 -AELDGQMDTGS--RPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPA 221
G G RPP PP + Q PP + G +G RP
Sbjct: 105 QGRPQGPPQQGGHPRPP------RGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQG 158
Query: 222 ELDGQ 226
GQ
Sbjct: 159 PPQGQ 163
Score = 32.3 bits (72), Expect = 0.46
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 177 PPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPP-AELDGQMDTGSRPPA 235
PP L GQ S+P A Q D + P + GQ +G PP + G G PP
Sbjct: 49 PP--LGGQQ---SQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPP 103
Query: 236 ELALPMPPPE 245
P PP+
Sbjct: 104 PQGRPQGPPQ 113
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 40.8 bits (94), Expect = 0.001
Identities = 64/249 (25%), Positives = 90/249 (36%), Gaps = 35/249 (14%)
Query: 22 PNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPA 81
P AP P G P ++ S PP E + R ++ E GQ P A
Sbjct: 6 PRGAPPPTMT--GDLQPRQVASSPGHPSQPPLEDNTPATRTTKGAREAGGQAQAMELPEA 63
Query: 82 ELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDG---GSRPPAE 138
+ DG +PP+ L GQ S PG+ R P + ++ G GS P
Sbjct: 64 QPRQARDGELKPPS-LRGQ--APSSTPGKRGSPQTPPGRSPLQAPSRLAGRAEGSPPQRY 120
Query: 139 LDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQ 198
+ G ++P + +T P Q++ P E+D G+ P G
Sbjct: 121 ILGIASSRTKPTLD-----ETPENP------QLEAAQLP--EVDTPQGPGTGAPLR-PGL 166
Query: 199 TDTGSRPPAELDGQMDRGSRPPAELDGQMDTG----SRPPAELALPMPPPEM----LQLG 250
T ++P AE G PP+ T RPPA P PP LQ G
Sbjct: 167 PRTEAQPAAEELGFHRCFQEPPSSFTSTNYTSPSATPRPPA----PGPPQSRGTSPLQPG 222
Query: 251 A-PHVQGAG 258
+ P Q +G
Sbjct: 223 SYPEYQASG 231
Score = 31.6 bits (70), Expect = 0.79
Identities = 33/119 (27%), Positives = 44/119 (36%), Gaps = 14/119 (11%)
Query: 148 RPPAELDGQMDT----GSRPPAELDGQ------MDTGSRPPAELDGQMDTGSRPPAELDG 197
RPP+ DG T S P GQ +DT PP D ++ PPA L
Sbjct: 383 RPPSAQDGLGSTRGPPSSLPQRHFPGQAYRASGVDTSPGPP---DTELAAPGPPPARLPQ 439
Query: 198 QTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPPEMLQLGAPHVQG 256
D + P G +R +GQ G R + P+P P++L P G
Sbjct: 440 LWDPTAAPYPTPPGGPLAATRSMF-FNGQPSPGQRLCLPQSAPLPWPQVLPTARPSPHG 497
>gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens]
Length = 981
Score = 40.8 bits (94), Expect = 0.001
Identities = 53/220 (24%), Positives = 77/220 (35%), Gaps = 15/220 (6%)
Query: 27 EPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQ 86
+P D GS PP E+ + G+ P L S PPAE + ++ AE+ +
Sbjct: 246 DPAAPDVGSVPPVEVVYSQEPGAQPDLAL-----ARSLPPAE-ELPVETPKRAGAEVSWE 299
Query: 87 MDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRP--PAELDGQMD 144
+ PP + D S P D P++ + G+ P P + G ++
Sbjct: 300 VSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISPQRVRGAVE 359
Query: 145 GGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMD-TGSRPPAELDGQTDTGS 203
P + + G D G PA + G+ P E + S PPA T
Sbjct: 360 APGTPKSLIPGPSDPG---PAVNRTESPMGALQPDEAEEWPGRPQSHPPAPPVQAPSTSR 416
Query: 204 RPPAELDGQMDRGSRPPAELDGQ---MDTGSRPPAELALP 240
R + Q G PP E S PPA P
Sbjct: 417 RGLIRVTTQRALGQPPPPEPTASSMASAPASSPPANATAP 456
Score = 38.9 bits (89), Expect = 0.005
Identities = 50/205 (24%), Positives = 76/205 (37%), Gaps = 16/205 (7%)
Query: 47 RGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSR 106
+G H + D GS PP E+ + G+ P L S PPAE + ++ R
Sbjct: 238 QGPHFTQQDPAAPDVGSVPPVEVVYSQEPGAQPDLAL-----ARSLPPAE-ELPVETPKR 291
Query: 107 PPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRP--P 164
E+ ++ PP + D S P D P++ + G+ P P
Sbjct: 292 AGAEVSWEVSSPGPPPKQADLPDAKDSPGPQPTDPPASEAPDRPSKPERAAMNGADPISP 351
Query: 165 AELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDR-GSRPPAEL 223
+ G ++ P + + G D G PA ++ G+ P E + R S PPA
Sbjct: 352 QRVRGAVEAPGTPKSLIPGPSDPG---PAVNRTESPMGALQPDEAEEWPGRPQSHPPAPP 408
Query: 224 DGQMDTGS----RPPAELALPMPPP 244
T R + AL PPP
Sbjct: 409 VQAPSTSRRGLIRVTTQRALGQPPP 433
Score = 38.1 bits (87), Expect = 0.008
Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 18/133 (13%)
Query: 136 PAELDGQMDGGSRPPAELDGQMDTGSR-----------PPAELDGQMDTGSRPPAELDGQ 184
P L + G PP + + T SR PP L T RP E G
Sbjct: 169 PPSLQHEGQEGQWPPRDEGLKAKTKSRVPPTSPSDHQGPPHTLVSHSGTVKRPVLEGQGG 228
Query: 185 MDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPP 244
+ + A+ G T P A D GS PP E+ + G++P LA +PP
Sbjct: 229 FEEHLQEAAQ--GPHFTQQDPAAP-----DVGSVPPVEVVYSQEPGAQPDLALARSLPPA 281
Query: 245 EMLQLGAPHVQGA 257
E L + P GA
Sbjct: 282 EELPVETPKRAGA 294
>gi|67188550 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1b
[Homo sapiens]
Length = 867
Score = 40.4 bits (93), Expect = 0.002
Identities = 57/232 (24%), Positives = 81/232 (34%), Gaps = 54/232 (23%)
Query: 6 ERGNCPPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRP 65
ER PPAQ + E APEP +GSC G++ G RP
Sbjct: 403 ERDIWPPAQAPTSSQELAGAPEP----QGSCAQG-----------------GRVAPGQRP 441
Query: 66 PAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAEL 125
G +LD + S +E +G S GE +G+ G +P A
Sbjct: 442 AQGATG---------TDLDFDLSSDSESSSESEGTKSSSSASDGESEGKR-GRQKPKAAP 491
Query: 126 DGQ---MDGGSRPPAELDGQMDGGSRPPA-ELDGQMDTGSRPPAELDGQMDTGSRPPAEL 181
+G G S P RP A L G+ + G+ P D + + G + E
Sbjct: 492 EGAGALAQGSSLEP----------GRPAAPSLPGEAEPGAHAP---DKEPELGGQEEGER 538
Query: 182 DGQMDTGS----RPPAELDGQTD--TGSRPPAELDGQMDRGSRPPAELDGQM 227
DG G+ R AE + Q +G LD M+ + D +
Sbjct: 539 DGLCGLGNGCADRKEAETESQNSELSGVTAGESLDQSMEEEEEEDTDEDDHL 590
>gi|67188445 CTD (carboxy-terminal domain, RNA polymerase II,
polypeptide A) phosphatase, subunit 1 isoform FCP1a
[Homo sapiens]
Length = 961
Score = 40.4 bits (93), Expect = 0.002
Identities = 57/232 (24%), Positives = 81/232 (34%), Gaps = 54/232 (23%)
Query: 6 ERGNCPPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRP 65
ER PPAQ + E APEP +GSC G++ G RP
Sbjct: 403 ERDIWPPAQAPTSSQELAGAPEP----QGSCAQG-----------------GRVAPGQRP 441
Query: 66 PAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDGQMDGGSRPPAEL 125
G +LD + S +E +G S GE +G+ G +P A
Sbjct: 442 AQGATG---------TDLDFDLSSDSESSSESEGTKSSSSASDGESEGKR-GRQKPKAAP 491
Query: 126 DGQ---MDGGSRPPAELDGQMDGGSRPPA-ELDGQMDTGSRPPAELDGQMDTGSRPPAEL 181
+G G S P RP A L G+ + G+ P D + + G + E
Sbjct: 492 EGAGALAQGSSLEP----------GRPAAPSLPGEAEPGAHAP---DKEPELGGQEEGER 538
Query: 182 DGQMDTGS----RPPAELDGQTD--TGSRPPAELDGQMDRGSRPPAELDGQM 227
DG G+ R AE + Q +G LD M+ + D +
Sbjct: 539 DGLCGLGNGCADRKEAETESQNSELSGVTAGESLDQSMEEEEEEDTDEDDHL 590
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 40.4 bits (93), Expect = 0.002
Identities = 59/246 (23%), Positives = 92/246 (37%), Gaps = 16/246 (6%)
Query: 38 PAELDRQMDRGS-HPPAELDGQMDRGS--RPPAELDGQMDRGSHPPAELDGQMD-GGSRP 93
P ++ ++ G PP + ++ G P A ++ G PP D + GG R
Sbjct: 981 PEREEKVLENGELTPPRREEKALENGELRSPEAGEKVLVNGGLTPPKSEDKVSENGGLRF 1040
Query: 94 PAELDGQMDGGS-RPPGELDGQMDGGSRPPA----ELDGQMDGGSRPPAELDGQMDGGSR 148
P + + G R PG + + P + ++ P A + + +GG
Sbjct: 1041 PRNTERPPETGPWRAPGPWEKTPESWGPAPTIGEPAPETSLERAPAPSAVVSSR-NGGET 1099
Query: 149 PPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAE 208
P L G+ P +TG P A G++D GS A + T G P +
Sbjct: 1100 APGPLGPAPKNGTLEPGTERRAPETGGAPRAPGAGRLDLGSGGRAPVGTGTAPGGGPGSG 1159
Query: 209 LD---GQMD--RGSRPPAELDGQMDTGSRPPAELALPMPPPEMLQLGAPHVQGAGDTGHS 263
+D G +D R PP L + R E A P PE+ G P + G +
Sbjct: 1160 VDAKAGWVDNTRPQPPPPPLPPPPEAQPR-RLEPAPPRARPEVAPEGEPGAPDSRAGGDT 1218
Query: 264 AARGEG 269
A G+G
Sbjct: 1219 ALSGDG 1224
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 40.4 bits (93), Expect = 0.002
Identities = 61/259 (23%), Positives = 82/259 (31%), Gaps = 53/259 (20%)
Query: 44 QMDRGSHPPAELDGQMDRGS--------RP-----PAELDGQMDRGSHP-PAELDGQMDG 89
Q R PP + +G+ +G RP P G +G P P + +GQ
Sbjct: 46 QPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQ 105
Query: 90 GSR--------------PPAELDGQMDGGSRPPGELDGQMDGG---SRPPAELDGQMDGG 132
G PP + Q G PG+ +G G S+ P G+ +G
Sbjct: 106 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG- 164
Query: 133 SRPPAELDGQMDGGSRPPAELDGQMDTGS--------RP-----PAELDGQMDTGSRP-P 178
PP + Q G P + +G G RP P G G P P
Sbjct: 165 --PPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP 222
Query: 179 AELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRP----P 234
+ +G G P PP + +G + PP G G P P
Sbjct: 223 GKPEGPPSQGGNKPQGPPPHPGKPQGPPPQ-EGNKPQRPPPPGRPQGPPPPGGNPQQPLP 281
Query: 235 AELALPMPPPEMLQLGAPH 253
P PP Q G PH
Sbjct: 282 PPAGKPQGPPPPPQGGRPH 300
>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
sapiens]
Length = 859
Score = 40.0 bits (92), Expect = 0.002
Identities = 71/266 (26%), Positives = 92/266 (34%), Gaps = 40/266 (15%)
Query: 21 EPNSAPEPRWMDKG-----SCPPAELDRQMD-----RGSHPPAELDGQMDRGSRPPAELD 70
EP P + G +CPPA D S P L + GSR
Sbjct: 570 EPGGPGSPGGLGGGPSAWEACPPALRGLHHDLLLRKMSSSSPDLLSAAL--GSRGRGATG 627
Query: 71 GQMDRGSHPPAELDGQMDGGSRPPAELDGQMDG--GSRP----PGELDGQMDGGSRPPAE 124
G D GS PPA D GS P + G G P PGE G + G +
Sbjct: 628 GAGDPGSPPPARGDTPPSEGSAPGSTSPDSPGGAKGEPPPPVGPGEGVGLLGTGREGTSG 687
Query: 125 LDGQMDGGSR-PPAEL-------DGQMDG--GSRPPAELDGQMD--TGSRPPAELDGQMD 172
G G PA L Q G E+D +++ + R P L+ +
Sbjct: 688 RGGSRAGSQHLTPAALLYRAAVTRSQKRGISSEEEEGEVDSEVELTSSQRWPQSLNMRQS 747
Query: 173 T---GSRPPAELDGQMDTGSRPPAELD---GQTDTGSRPPAELDGQMDRGSRPPAELDGQ 226
S P+ DG+ T S P G T+T RP D +GS P LD
Sbjct: 748 LSTFSSENPS--DGEEGTASEPSPSGTPEVGSTNTDERPDERSDDMCSQGSEIP--LDPP 803
Query: 227 MDTGSRPPAELALPMPPPEMLQLGAP 252
P +LP+P E+L+ P
Sbjct: 804 PSEVIPGPEPSSLPIPHQELLRERGP 829
Score = 31.6 bits (70), Expect = 0.79
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 11/82 (13%)
Query: 188 GSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTGSRPPAELALPMPPPEML 247
GSR G D GS PPA RG PP+E T P PPP
Sbjct: 619 GSRGRGATGGAGDPGSPPPA-------RGDTPPSEGSAPGSTSPDSPGGAKGEPPPP--- 668
Query: 248 QLGAPHVQGAGDTGHSAARGEG 269
+G G TG G G
Sbjct: 669 -VGPGEGVGLLGTGREGTSGRG 689
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 40.0 bits (92), Expect = 0.002
Identities = 73/279 (26%), Positives = 83/279 (29%), Gaps = 42/279 (15%)
Query: 11 PPAQLDGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELD 70
P + G G P PR + PP D D P + G P
Sbjct: 647 PGGPMPGPHGGPGGPVGPRLLGPPP-PPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHR 705
Query: 71 GQMDRGSH----PPAELDGQMDG--GSRPP----AELDGQMDGGSRPPGELDGQMDG--- 117
G+ RG + PP G G G PP G + GG P E G G
Sbjct: 706 GRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSS 765
Query: 118 GSRPPAELDGQMDGGSRPPAELDGQMDGGS--RPPAELDGQMDTGS--RPPAELDGQMDT 173
G RP G M G RP G M GG RP G + GS RP G M
Sbjct: 766 GHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGA 825
Query: 174 GS--RPPAELDGQM-DTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQMDTG 230
G RP G M +G P E G P ++ G R P
Sbjct: 826 GGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGP---------- 875
Query: 231 SRPPAELALPMPPPEMLQLGAPHVQGAGDTGHSAARGEG 269
PP E P G G GH G
Sbjct: 876 -----------PPHEHRGHDGPGHGGGGHRGHDGGHSHG 903
Score = 29.3 bits (64), Expect = 3.9
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 135 PPAE-LDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAEL 181
PP+E +D G PP E+ MDT S P LD + P +L
Sbjct: 342 PPSEAMDADRPGTPVPPVEVPELMDTASLEPGALDAKPVESPGDPNQL 389
Score = 28.5 bits (62), Expect = 6.7
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 79 PPAE-LDGQMDGGSRPPAELDGQMDGGSRPPGELDGQ 114
PP+E +D G PP E+ MD S PG LD +
Sbjct: 342 PPSEAMDADRPGTPVPPVEVPELMDTASLEPGALDAK 378
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 40.0 bits (92), Expect = 0.002
Identities = 40/126 (31%), Positives = 47/126 (37%), Gaps = 17/126 (13%)
Query: 65 PPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPP-GELDGQMDGGSRPP- 122
PP L GQ S P A Q DG + P + GQ G PP G+ G G PP
Sbjct: 49 PP--LGGQQ---SQPSAGDGNQDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPP 103
Query: 123 ----AELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDTGSRPP 178
+ Q G RPP G+ G PP + Q PP + G G RP
Sbjct: 104 PQGRPQGPPQQGGHPRPPR---GRPQG---PPQQGGHQQGPPPPPPGKPQGPPPQGGRPQ 157
Query: 179 AELDGQ 184
GQ
Sbjct: 158 GPPQGQ 163
Score = 38.1 bits (87), Expect = 0.008
Identities = 38/123 (30%), Positives = 46/123 (37%), Gaps = 16/123 (13%)
Query: 35 SCPPAELDRQMDRGSHPPAELDGQMDRGSRPP-AELDGQMDRGSHPPAELDGQMDGGSRP 93
S P A Q D P + GQ +G PP + G +G HPP G+ G P
Sbjct: 56 SQPSAGDGNQDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPP-QGRPQG---P 111
Query: 94 PAELDGQMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAEL 153
P Q G RPP G+ G PP + Q PP + G G RP
Sbjct: 112 P-----QQGGHPRPP---RGRPQG---PPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPP 160
Query: 154 DGQ 156
GQ
Sbjct: 161 QGQ 163
Score = 37.0 bits (84), Expect = 0.019
Identities = 37/121 (30%), Positives = 46/121 (38%), Gaps = 17/121 (14%)
Query: 52 PAELDGQMDRGSRP-PAELDGQMDRGSHPP-AELDGQMDGGSRPPAELDGQMDGGSRPPG 109
P+ DG D G + P + GQ +G PP + G G PP G+ G PP
Sbjct: 58 PSAGDGNQDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPP-QGRPQG---PP- 112
Query: 110 ELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDG 169
Q G RPP G+ G PP + Q PP + G G RP G
Sbjct: 113 ----QQGGHPRPPR---GRPQG---PPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQG 162
Query: 170 Q 170
Q
Sbjct: 163 Q 163
Score = 33.5 bits (75), Expect = 0.21
Identities = 37/130 (28%), Positives = 45/130 (34%), Gaps = 22/130 (16%)
Query: 111 LDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPP-AELDG 169
LD + G PP L GQ S+P A Q DG + P + GQ G PP + G
Sbjct: 42 LDEERQG---PP--LGGQQ---SQPSAGDGNQDDGPQQGPPQQGGQQQQGPPPPQGKPQG 93
Query: 170 QMDTGSRPP---AELDGQMDTGSR----------PPAELDGQTDTGSRPPAELDGQMDRG 216
G PP G G PP + Q PP + G +G
Sbjct: 94 PPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQG 153
Query: 217 SRPPAELDGQ 226
RP GQ
Sbjct: 154 GRPQGPPQGQ 163
Score = 32.0 bits (71), Expect = 0.60
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 177 PPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPP-AELDGQMDTGSRPPA 235
PP L GQ S+P A Q D + P + GQ +G PP + G G PP
Sbjct: 49 PP--LGGQQ---SQPSAGDGNQDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPP 103
Query: 236 ELALPMPPPE 245
P PP+
Sbjct: 104 PQGRPQGPPQ 113
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 16 DGRTGEPNSAPEPRWMDKGSCPPAELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDR 75
+G GE S P +++ S PP E ++R S PP E ++R S PP E ++R
Sbjct: 5044 EGEVGERYSTPPGETLERYSTPPGE---TLERYSTPPGE---TLERYSTPPGE---TLER 5094
Query: 76 GSHPPAELDGQMDGGSRPPAELDGQMD---GGSRPPG 109
S PP E ++ S PP E + GG P G
Sbjct: 5095 YSTPPGE---TLERYSTPPGEALERYSIPTGGPNPTG 5128
>gi|239757110 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 39.3 bits (90), Expect = 0.004
Identities = 47/162 (29%), Positives = 59/162 (36%), Gaps = 21/162 (12%)
Query: 57 GQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGS--RPPAELDGQMDGGSRPPGELDGQ 114
G+ + R PA + R SHPP GS + PAEL Q+ + PPG G
Sbjct: 26 GRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHPAELSVQLP-ANPPPGLNQGC 84
Query: 115 MDGGSR---------PPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPA 165
+ S P A L G G R E +GQ G ++ Q P
Sbjct: 85 IRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQRRGC------VEKQPRPTPTPAC 138
Query: 166 ELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPA 207
EL G PP TG+R + G TGS P A
Sbjct: 139 ELTGLAPAPPTPPPAWWRWARTGTR---AMGGAASTGSAPTA 177
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 38.5 bits (88), Expect = 0.006
Identities = 39/174 (22%), Positives = 63/174 (36%)
Query: 54 ELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDG 113
E +GQ+ E +GQ+ E +GQ+ E +GQ+ E +G
Sbjct: 56 EQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEG 115
Query: 114 QMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDT 173
Q+ E +GQ+ E +GQ+ E +GQ+ E +GQ+
Sbjct: 116 QVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVRE 175
Query: 174 GSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQM 227
E +GQ+ E +GQ E + QM + E + QM
Sbjct: 176 QEGQVREQEGQVREQEGQMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQM 229
Score = 37.7 bits (86), Expect = 0.011
Identities = 43/188 (22%), Positives = 70/188 (37%), Gaps = 8/188 (4%)
Query: 40 ELDRQMDRGSHPPAELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDG 99
EL R+++ P + +GQ+ E +GQ+ E +GQ+ E +G
Sbjct: 36 ELKRKLETDKIPLPQ-EGQVREQEGQVREQEGQVREQEGQVREQEGQV-------REQEG 87
Query: 100 QMDGGSRPPGELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDT 159
Q+ E +GQ+ E +GQ+ E +GQ+ E +GQ+
Sbjct: 88 QVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVRE 147
Query: 160 GSRPPAELDGQMDTGSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRP 219
E +GQ+ E +GQ+ E +GQ E +GQM
Sbjct: 148 QEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQMGEQEGQMGEQEEQ 207
Query: 220 PAELDGQM 227
E + QM
Sbjct: 208 MGEQEEQM 215
Score = 36.6 bits (83), Expect = 0.024
Identities = 38/174 (21%), Positives = 62/174 (35%)
Query: 54 ELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDG 113
E +GQ+ E +GQ+ E +GQ+ E +GQ+ E +G
Sbjct: 70 EQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEG 129
Query: 114 QMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDT 173
Q+ E +GQ+ E +GQ+ E +GQ+ E +GQ+
Sbjct: 130 QVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVRE 189
Query: 174 GSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQM 227
E +GQM E + Q E + QM + E + Q+
Sbjct: 190 QEGQMGEQEGQMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQV 243
Score = 36.2 bits (82), Expect = 0.032
Identities = 38/174 (21%), Positives = 60/174 (34%)
Query: 54 ELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDG 113
E +GQ+ E +GQ+ E +GQ+ E +GQ+ E +G
Sbjct: 98 EQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEG 157
Query: 114 QMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDT 173
Q+ E +GQ+ E +GQ+ E +GQM E + QM
Sbjct: 158 QVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQMGEQEGQMGEQEEQMGEQEEQMQK 217
Query: 174 GSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQM 227
E + QM E + Q + + QM + E + QM
Sbjct: 218 QEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRKQEEQMREQEEQM 271
Score = 35.0 bits (79), Expect = 0.071
Identities = 37/174 (21%), Positives = 61/174 (35%)
Query: 54 ELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDG 113
E +GQ+ E +GQ+ E +GQ+ E +GQ+ E +G
Sbjct: 84 EQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEG 143
Query: 114 QMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDT 173
Q+ E +GQ+ E +GQ+ E +GQ+ E +GQM
Sbjct: 144 QVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQMGEQEGQMGE 203
Query: 174 GSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQM 227
E + QM E + Q E + Q+ + + + QM
Sbjct: 204 QEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQM 257
Score = 30.8 bits (68), Expect = 1.3
Identities = 39/174 (22%), Positives = 58/174 (33%), Gaps = 8/174 (4%)
Query: 54 ELDGQMDRGSRPPAELDGQMDRGSHPPAELDGQMDGGSRPPAELDGQMDGGSRPPGELDG 113
E +GQ+ E +GQ+ E +GQ+ E +GQM GE +G
Sbjct: 147 EQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQVREQEGQM-------GEQEG 199
Query: 114 QMDGGSRPPAELDGQMDGGSRPPAELDGQMDGGSRPPAELDGQMDTGSRPPAELDGQMDT 173
QM E + QM E + QM E + Q+ + + QM
Sbjct: 200 QMGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQEEQVQKQEEQVQKQEEQMRK 259
Query: 174 GSRPPAELDGQMDTGSRPPAELDGQTDTGSRPPAELDGQMDRGSRPPAELDGQM 227
E + QM + QT+ E + QM E + QM
Sbjct: 260 QEEQMREQEEQMREQEEQMLKQKEQTEQ-EEQTGEQEEQMREQEEQMREQEEQM 312
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.135 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,091,028
Number of Sequences: 37866
Number of extensions: 1158694
Number of successful extensions: 4480
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 3310
Number of HSP's gapped (non-prelim): 889
length of query: 275
length of database: 18,247,518
effective HSP length: 101
effective length of query: 174
effective length of database: 14,423,052
effective search space: 2509611048
effective search space used: 2509611048
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.