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Search of human proteins with 239747129
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo
sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo ... 214 9e-57
gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo ... 197 1e-51
gi|169217749 PREDICTED: hCG2042718 [Homo sapiens] 194 2e-50
gi|239750222 PREDICTED: hCG2042718 [Homo sapiens] 194 2e-50
gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo sap... 194 2e-50
gi|169218130 PREDICTED: hypothetical protein [Homo sapiens] 186 3e-48
gi|169217341 PREDICTED: hypothetical protein [Homo sapiens] 186 3e-48
gi|239750225 PREDICTED: hypothetical protein XP_002347322 [Homo ... 140 2e-34
gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo sap... 133 3e-32
gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo sap... 133 3e-32
gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo sa... 133 3e-32
gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo sa... 132 8e-32
gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member ... 120 2e-28
gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member ... 120 2e-28
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 83 4e-17
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 83 4e-17
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 83 4e-17
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 79 6e-16
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 79 6e-16
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 78 1e-15
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 44 3e-05
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens] 43 5e-05
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo... 43 5e-05
gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo... 43 5e-05
gi|118150656 ankyrin repeat domain 7 [Homo sapiens] 42 8e-05
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 39 0.001
gi|96975023 ankyrin repeat and death domain containing 1A [Homo ... 37 0.003
gi|239757617 PREDICTED: similar to hCG1793014 [Homo sapiens] 37 0.003
gi|7706194 proline rich 16 [Homo sapiens] 37 0.003
gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens] 36 0.006
>gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo
sapiens]
Length = 102
Score = 214 bits (546), Expect = 9e-57
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
>gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo
sapiens]
Length = 102
Score = 197 bits (501), Expect = 1e-51
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRR QTA+GSIEHVYTGSGYRI DSELQKIHRAAVKGDA GVERCLARRSGDL
Sbjct: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
DALDKQHRVSLLCPGWCPMAQSWLTATSAC VQAILLPQP K
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK 102
>gi|169217749 PREDICTED: hCG2042718 [Homo sapiens]
Length = 102
Score = 194 bits (492), Expect = 2e-50
Identities = 95/102 (93%), Positives = 95/102 (93%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGS YRI DSELQKIHRAAVKGDA GVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
DA DKQHRVSLLCPGWCPMAQSWLTATSAC VQAILLPQP K
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|239750222 PREDICTED: hCG2042718 [Homo sapiens]
Length = 102
Score = 194 bits (492), Expect = 2e-50
Identities = 95/102 (93%), Positives = 95/102 (93%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGS YRI DSELQKIHRAAVKGDA GVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
DA DKQHRVSLLCPGWCPMAQSWLTATSAC VQAILLPQP K
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo
sapiens]
Length = 102
Score = 194 bits (492), Expect = 2e-50
Identities = 95/102 (93%), Positives = 95/102 (93%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGS YRI DSELQKIHRAAVKGDA GVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
DA DKQHRVSLLCPGWCPMAQSWLTATSAC VQAILLPQP K
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|169218130 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 186 bits (473), Expect = 3e-48
Identities = 93/102 (91%), Positives = 93/102 (91%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGS RGQ AHGSIEHVY GSGYRIRDSELQKIHRAAVKGDA GVERCLARRSG L
Sbjct: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
DALDKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ K
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
>gi|169217341 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 186 bits (473), Expect = 3e-48
Identities = 93/102 (91%), Positives = 93/102 (91%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGS RGQ AHGSIEHVY GSGYRIRDSELQKIHRAAVKGDA GVERCLARRSG L
Sbjct: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
DALDKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ K
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQLPK 102
>gi|239750225 PREDICTED: hypothetical protein XP_002347322 [Homo
sapiens]
Length = 68
Score = 140 bits (353), Expect = 2e-34
Identities = 68/68 (100%), Positives = 68/68 (100%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
Query: 61 DALDKQHR 68
DALDKQHR
Sbjct: 61 DALDKQHR 68
>gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo
sapiens]
Length = 823
Score = 133 bits (335), Expect = 3e-32
Identities = 65/71 (91%), Positives = 67/71 (94%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTA GSI+HVYTGSGYRIRDSELQKIHRAAVKGDA VERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo
sapiens]
Length = 823
Score = 133 bits (335), Expect = 3e-32
Identities = 65/71 (91%), Positives = 67/71 (94%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTA GSI+HVYTGSGYRIRDSELQKIHRAAVKGDA VERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo
sapiens]
Length = 823
Score = 133 bits (335), Expect = 3e-32
Identities = 65/71 (91%), Positives = 67/71 (94%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTA GSI+HVYTGSGYRIRDSELQKIHRAAVKGDA VERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo
sapiens]
Length = 823
Score = 132 bits (331), Expect = 8e-32
Identities = 64/71 (90%), Positives = 67/71 (94%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGFGSRRGQTA GSI+HVYTGSGYRIRDSELQKIHRAAVKGDA VERCLARRSG+L
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGEL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member
A5 [Homo sapiens]
Length = 823
Score = 120 bits (302), Expect = 2e-28
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGF SRRGQT GSI+H+YTGSGYRIR SELQKIH+AAVKGDA +ERCLARRSGDL
Sbjct: 1 MKLFGFRSRRGQTVLGSIDHLYTGSGYRIRYSELQKIHKAAVKGDAAEMERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member
A5 [Homo sapiens]
Length = 823
Score = 120 bits (302), Expect = 2e-28
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
MKLFGF SRRGQT GSI+H+YTGSGYRIR SELQKIH+AAVKGDA +ERCLARRSGDL
Sbjct: 1 MKLFGFRSRRGQTVLGSIDHLYTGSGYRIRYSELQKIHKAAVKGDAAEMERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 83.2 bits (204), Expect = 4e-17
Identities = 42/70 (60%), Positives = 48/70 (68%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLD 61
KLF FG R GQ S++ Y G GY IRD EL+KIHRAA+KGDA VERCL RR DLD
Sbjct: 110 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 169
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 170 ARDRKDRTVL 179
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 83.2 bits (204), Expect = 4e-17
Identities = 42/70 (60%), Positives = 48/70 (68%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLD 61
KLF FG R GQ S++ Y G GY IRD EL+KIHRAA+KGDA VERCL RR DLD
Sbjct: 3 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 62
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 63 ARDRKDRTVL 72
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 83.2 bits (204), Expect = 4e-17
Identities = 42/70 (60%), Positives = 48/70 (68%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLD 61
KLF FG R GQ S++ Y G GY IRD EL+KIHRAA+KGDA VERCL RR DLD
Sbjct: 110 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 169
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 170 ARDRKDRTVL 179
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 79.3 bits (194), Expect = 6e-16
Identities = 40/70 (57%), Positives = 45/70 (64%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLD 61
KL FG R GQ S++ Y G GY IRD EL+KIHRAA+KGDA VE CL RR DLD
Sbjct: 102 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 161
Query: 62 ALDKQHRVSL 71
DK+ R L
Sbjct: 162 VRDKKDRTVL 171
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 79.3 bits (194), Expect = 6e-16
Identities = 40/70 (57%), Positives = 45/70 (64%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLD 61
KL FG R GQ S++ Y G GY IRD EL+KIHRAA+KGDA VE CL RR DLD
Sbjct: 131 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 190
Query: 62 ALDKQHRVSL 71
DK+ R L
Sbjct: 191 VRDKKDRTVL 200
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 78.2 bits (191), Expect = 1e-15
Identities = 39/70 (55%), Positives = 45/70 (64%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLD 61
KL FG R GQ S++ Y G GY IRD EL+KIHRAA+KGDA VE CL RR DLD
Sbjct: 131 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 190
Query: 62 ALDKQHRVSL 71
D++ R L
Sbjct: 191 VRDRKDRTVL 200
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 43.9 bits (102), Expect = 3e-05
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 3 LFGFGSRRGQTAHGSIEH---VYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGD 59
L F R+ +A G E Y+ GY +RD +L KIH+AA G+ V++ L R
Sbjct: 13 LGSFARRQRSSAGGGGEPGEGAYSQPGYHVRDRDLGKIHKAASAGNVAKVQQILLLRKNG 72
Query: 60 LDALDKQHRVSL 71
L+ DK +R +L
Sbjct: 73 LNDRDKMNRTAL 84
>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
Length = 917
Score = 43.1 bits (100), Expect = 5e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 22 YTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLDALDKQHRVSLL 72
++ GYR+R +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
sapiens]
Length = 917
Score = 43.1 bits (100), Expect = 5e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 22 YTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLDALDKQHRVSLL 72
++ GYR+R +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
>gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo
sapiens]
Length = 917
Score = 43.1 bits (100), Expect = 5e-05
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 22 YTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLDALDKQHRVSLL 72
++ GYR+R +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
>gi|118150656 ankyrin repeat domain 7 [Homo sapiens]
Length = 254
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 2 KLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLD 61
KLF F R+ +T GY +R+ +L+K+HRAA GD ++ L + D++
Sbjct: 3 KLFSFWKRKNETR---------SQGYNLREKDLKKLHRAASVGDLKKLKEYLQIKKYDVN 53
Query: 62 ALDKQHRVSL 71
DK++R L
Sbjct: 54 MQDKKYRTPL 63
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 38.5 bits (88), Expect = 0.001
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 75 GWCPMAQSWLTATSACWVQAILLPQPSK 102
GW MA+S TATS +QAILLPQP K
Sbjct: 299 GWSAMARSRFTATSTSQIQAILLPQPPK 326
>gi|96975023 ankyrin repeat and death domain containing 1A [Homo
sapiens]
Length = 522
Score = 37.4 bits (85), Expect = 0.003
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 75 GWCPMAQSWLTATSACWVQAILLPQP 100
GW MA+S LTATSA VQ IL+PQP
Sbjct: 495 GWSTMARSQLTATSASRVQMILVPQP 520
>gi|239757617 PREDICTED: similar to hCG1793014 [Homo sapiens]
Length = 251
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 21 VYTGS-GYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDLDALDKQHRVSL 71
VYT + Y I +L+KIH+AA +G A +ER + + + DL+ D + R +L
Sbjct: 25 VYTNNDSYVIHHGDLRKIHKAASRGQAWKLERMMKKTTMDLNIRDAKKRTAL 76
>gi|7706194 proline rich 16 [Homo sapiens]
Length = 281
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/23 (82%), Positives = 20/23 (86%)
Query: 79 MAQSWLTATSACWVQAILLPQPS 101
MAQS LTATSA VQAILLPQP+
Sbjct: 1 MAQSGLTATSASQVQAILLPQPA 23
>gi|218083233 chitinase domain containing 1 isoform b [Homo
sapiens]
Length = 418
Score = 36.2 bits (82), Expect = 0.006
Identities = 14/17 (82%), Positives = 15/17 (88%)
Query: 73 CPGWCPMAQSWLTATSA 89
CPGW MA+SWLTATSA
Sbjct: 44 CPGWSAMARSWLTATSA 60
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,969,324
Number of Sequences: 37866
Number of extensions: 140150
Number of successful extensions: 353
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 292
Number of HSP's gapped (non-prelim): 66
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.