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Search of human proteins with 239746947
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746947 PREDICTED: hypothetical protein XP_002343892 [Homo
sapiens]
(146 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757920 PREDICTED: hypothetical protein [Homo sapiens] 304 2e-83
gi|239752430 PREDICTED: hypothetical protein XP_002348270 [Homo ... 304 2e-83
gi|239746947 PREDICTED: hypothetical protein XP_002343892 [Homo ... 304 2e-83
gi|74272284 membrane associated guanylate kinase, WW and PDZ dom... 34 0.039
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 33 0.086
gi|50083281 KIAA1853 protein [Homo sapiens] 33 0.11
gi|24475863 H1 histone family, member O, oocyte-specific [Homo s... 32 0.19
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 31 0.33
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 31 0.33
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 31 0.33
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 31 0.33
gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo ... 30 0.56
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 30 0.56
gi|57864582 hornerin [Homo sapiens] 30 0.95
gi|239757230 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|239751738 PREDICTED: hypothetical protein [Homo sapiens] 29 1.2
gi|239746239 PREDICTED: hypothetical protein XP_002343711 [Homo ... 29 1.2
gi|19923899 coiled-coil domain containing 45 [Homo sapiens] 29 1.2
gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo ... 28 2.1
gi|239749205 PREDICTED: hypothetical protein XP_002346953 [Homo ... 28 2.1
gi|239743285 PREDICTED: hypothetical protein XP_002342817 [Homo ... 28 2.1
gi|239508969 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|116517332 STG protein [Homo sapiens] 28 2.1
gi|239755121 PREDICTED: hypothetical protein [Homo sapiens] 28 2.8
gi|239749649 PREDICTED: hypothetical protein [Homo sapiens] 28 2.8
gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo ... 28 2.8
gi|221136876 Ras association (RalGDS/AF-6) domain family (N-term... 28 2.8
gi|221136872 Ras association (RalGDS/AF-6) domain family (N-term... 28 2.8
gi|4502483 Ras association (RalGDS/AF-6) domain family (N-termin... 28 2.8
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 28 2.8
>gi|239757920 PREDICTED: hypothetical protein [Homo sapiens]
Length = 146
Score = 304 bits (779), Expect = 2e-83
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL 60
MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL
Sbjct: 1 MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL 60
Query: 61 SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR 120
SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR
Sbjct: 61 SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR 120
Query: 121 GGSVRTKSQDLEPQILGSREVLSKPF 146
GGSVRTKSQDLEPQILGSREVLSKPF
Sbjct: 121 GGSVRTKSQDLEPQILGSREVLSKPF 146
>gi|239752430 PREDICTED: hypothetical protein XP_002348270 [Homo
sapiens]
Length = 146
Score = 304 bits (779), Expect = 2e-83
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL 60
MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL
Sbjct: 1 MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL 60
Query: 61 SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR 120
SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR
Sbjct: 61 SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR 120
Query: 121 GGSVRTKSQDLEPQILGSREVLSKPF 146
GGSVRTKSQDLEPQILGSREVLSKPF
Sbjct: 121 GGSVRTKSQDLEPQILGSREVLSKPF 146
>gi|239746947 PREDICTED: hypothetical protein XP_002343892 [Homo
sapiens]
Length = 146
Score = 304 bits (779), Expect = 2e-83
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL 60
MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL
Sbjct: 1 MPTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGL 60
Query: 61 SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR 120
SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR
Sbjct: 61 SRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKR 120
Query: 121 GGSVRTKSQDLEPQILGSREVLSKPF 146
GGSVRTKSQDLEPQILGSREVLSKPF
Sbjct: 121 GGSVRTKSQDLEPQILGSREVLSKPF 146
>gi|74272284 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform c [Homo sapiens]
Length = 1462
Score = 34.3 bits (77), Expect = 0.039
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 14 PKEQQPSKRSEGRRSC-FFFHRRECREEAESYTEKGPRE--PTNLRYGGLSRRAGAQRSH 70
PK + P KR EG RS RRE E+ + + RE PT R G SRR +RS
Sbjct: 1318 PKRRSPEKRREGTRSADNTLERREKHEKRRDVSPERRRERSPTRRRDGSPSRR---RRSL 1374
Query: 71 KRRGESGSYGEAKRKGA 87
+R E E +R G+
Sbjct: 1375 ERLLEQRRSPERRRGGS 1391
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 33.1 bits (74), Expect = 0.086
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 6/127 (4%)
Query: 7 HSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYG-GLSRRAG 65
++D PK + PS+ +S R EE +G + +LR SR G
Sbjct: 279 NNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKG 338
Query: 66 AQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKRGGSVR 125
RS R S S + KRKG K + + R + S S + + R K G S +
Sbjct: 339 GSRS---RSRSRSKSKDKRKGR-KRSREESRSRSRS-RSKSERSRKRGSKRDSKAGSSKK 393
Query: 126 TKSQDLE 132
K +D +
Sbjct: 394 KKKEDTD 400
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 32.7 bits (73), Expect = 0.11
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 15 KEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRG 74
K PS+ S RRS + RE Y+EK ++ R RR KRR
Sbjct: 441 KRSPPSRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERER--ARRRRRSYSPMRKRRR 498
Query: 75 ESGSYGEAKR 84
+S S+ EA+R
Sbjct: 499 DSPSHLEARR 508
>gi|24475863 H1 histone family, member O, oocyte-specific [Homo
sapiens]
Length = 346
Score = 32.0 bits (71), Expect = 0.19
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 46 EKGPREPTNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSCASA 105
+K R P++ GGLSR+A A+ S +G++ +Y + K + + G A++
Sbjct: 222 DKAMRAPSSA--GGLSRKAKAKGSRSSQGDAEAYRKTKAESKSSKPTASKVKNG---AAS 276
Query: 106 PWKLALQKEARVLKRGGSVRTKS 128
P K + +A+ K G TK+
Sbjct: 277 PTKKKVVAKAKAPKAGQGPNTKA 299
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 31.2 bits (69), Expect = 0.33
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 10 GAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSR----RAG 65
G K ++P + G +S RR ++ + +G + T GG SR R G
Sbjct: 219 GGRRKKHRRPKPAAGGAKS-----RRGGGKKPQKQRRRGQKAAT----GGKSRVGKSRGG 269
Query: 66 AQRSHKRRGESGSYGEAKRKGAGKWGQ 92
+ +R+G++ + AKR+GA G+
Sbjct: 270 GDKKLRRQGQNAALAGAKRRGAATAGE 296
Score = 27.3 bits (59), Expect = 4.7
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 34 RRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQG 93
RR + +KG + R+G + G +R RR + + G R+G GK Q
Sbjct: 191 RRRGAKSRGDEDKKGRQREAKSRFG---KTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQK 247
Query: 94 QWREQGLSCAS 104
Q R +G A+
Sbjct: 248 Q-RRRGQKAAT 257
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 31.2 bits (69), Expect = 0.33
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 14 PKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRR 73
PK+Q+ +K + R+ E E + Y EK E YG G +R K R
Sbjct: 54 PKKQKENKPGKPRKRKKRDSEEEFGSERDEYREKS--ESGGSEYG---TGPGRKRRRKHR 108
Query: 74 GESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKL 109
+ + ++KG G GQ Q ++ + W L
Sbjct: 109 EKKEKKTKRRKKGEGDGGQKQVEQKSSATLLLTWGL 144
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 31.2 bits (69), Expect = 0.33
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 14 PKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRR 73
PK+Q+ +K + R+ E E + Y EK E YG G +R K R
Sbjct: 54 PKKQKENKPGKPRKRKKRDSEEEFGSERDEYREKS--ESGGSEYG---TGPGRKRRRKHR 108
Query: 74 GESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKL 109
+ + ++KG G GQ Q ++ + W L
Sbjct: 109 EKKEKKTKRRKKGEGDGGQKQVEQKSSATLLLTWGL 144
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 31.2 bits (69), Expect = 0.33
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 14 PKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRR 73
PK+Q+ +K + R+ E E + Y EK E YG G +R K R
Sbjct: 113 PKKQKENKPGKPRKRKKRDSEEEFGSERDEYREKS--ESGGSEYG---TGPGRKRRRKHR 167
Query: 74 GESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKL 109
+ + ++KG G GQ Q ++ + W L
Sbjct: 168 EKKEKKTKRRKKGEGDGGQKQVEQKSSATLLLTWGL 203
>gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo
sapiens]
Length = 564
Score = 30.4 bits (67), Expect = 0.56
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 7 HSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGA 66
HS P+EQ P+ GR F ++ S E+GP E + G RRAG
Sbjct: 19 HSRPRPAPQEQGPASTCTGRLWSF--------DKRRSNGERGPGEERERKPAGDGRRAGD 70
Query: 67 QR 68
QR
Sbjct: 71 QR 72
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 30.4 bits (67), Expect = 0.56
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 7 HSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGA 66
HS P+EQ P+ GR F ++ S E+GP E + G RRAG
Sbjct: 19 HSRPRPAPQEQGPASTCTGRLWSF--------DKRRSNGERGPGEERERKPAGDGRRAGD 70
Query: 67 QR 68
QR
Sbjct: 71 QR 72
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 29.6 bits (65), Expect = 0.95
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 31 FFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGES-------GSYGEAK 83
F H ++ SY++ G + YG R+G +R G S G +G
Sbjct: 1637 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGS 1696
Query: 84 RKGAGKWGQGQWREQGLS 101
R+ +G QG Q S
Sbjct: 1697 RQSSGHGRQGSGSGQSPS 1714
Score = 29.6 bits (65), Expect = 0.95
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 31 FFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGES-------GSYGEAK 83
F H ++ SY++ G + YG R+G +R G S G +G
Sbjct: 2577 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGS 2636
Query: 84 RKGAGKWGQGQWREQGLS 101
R+ +G QG Q S
Sbjct: 2637 RQSSGHGRQGSGSGQSPS 2654
Score = 29.3 bits (64), Expect = 1.2
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 4 SPFHSDGAMMPKEQQPSKRSEGRRS-CFFFHRRECREEAESYTE--KGPREPTNLRYGGL 60
S D +EQ+ +++ E +R F H E +SY+ +G +P +
Sbjct: 99 SKLRDDTHQHQEEQEETEKEENKRQESSFSHSSWSAGENDSYSRNVRGSLKPGT---ESI 155
Query: 61 SRRAGAQRSHKRR-----GESGSYGEAKRKGAGKWGQGQ 94
SRR QR + G+S SYGE G+GQ
Sbjct: 156 SRRLSFQRDFSGQHNSYSGQSSSYGEQNSDSHQSSGRGQ 194
Score = 29.3 bits (64), Expect = 1.2
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 31 FFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGES-------GSYGEAK 83
F H ++ SY++ G + YG R+G +R G S G +G
Sbjct: 1167 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGS 1226
Query: 84 RKGAGKWGQG 93
R+ +G QG
Sbjct: 1227 RQSSGHGRQG 1236
Score = 29.3 bits (64), Expect = 1.2
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 31 FFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGES-------GSYGEAK 83
F H ++ SY++ G + YG R+G +R G S G +G
Sbjct: 2107 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGS 2166
Query: 84 RKGAGKWGQG 93
R+ +G QG
Sbjct: 2167 RQSSGHGRQG 2176
Score = 28.9 bits (63), Expect = 1.6
Identities = 26/107 (24%), Positives = 36/107 (33%), Gaps = 8/107 (7%)
Query: 2 PTSPFHSDGAMMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLS 61
P+S H G P G S F H E + YT+ G + +G
Sbjct: 437 PSSGQHGTGFGRSSSSGPYVSGSGYSSGFG-HHESSSEHSSGYTQHGSGSGHSSGHGQHG 495
Query: 62 RRAGAQRSHKRRGES-------GSYGEAKRKGAGKWGQGQWREQGLS 101
R+G +R+G S G +G R+ G G Q S
Sbjct: 496 SRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPS 542
>gi|239757230 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 29.3 bits (64), Expect = 1.2
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 52 PTNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSC 102
P R+ LSRRA AQ +++ + G G+ + + WREQG +C
Sbjct: 89 PACRRHRLLSRRA-AQSTNRGQAGGGRRAHGGGVGSARLARRVWREQGAAC 138
>gi|239751738 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 29.3 bits (64), Expect = 1.2
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 52 PTNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSC 102
P R+ LSRRA AQ +++ + G G+ + + WREQG +C
Sbjct: 89 PACRRHRLLSRRA-AQSTNRGQAGGGRRAHGGGVGSARLARRVWREQGAAC 138
>gi|239746239 PREDICTED: hypothetical protein XP_002343711 [Homo
sapiens]
Length = 144
Score = 29.3 bits (64), Expect = 1.2
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 52 PTNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKWGQGQWREQGLSC 102
P R+ LSRRA AQ +++ + G G+ + + WREQG +C
Sbjct: 89 PACRRHRLLSRRA-AQSTNRGQAGGGRRAHGGGVGSARLARRVWREQGAAC 138
>gi|19923899 coiled-coil domain containing 45 [Homo sapiens]
Length = 821
Score = 29.3 bits (64), Expect = 1.2
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 18/85 (21%)
Query: 40 EAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGESGSY--GEAKRKGAGKWGQGQWRE 97
+A+++TE RE LR + G R H++ E+ GEA RKG + Q
Sbjct: 480 QAQAFTEAFERE---LRRHKVQENIGPLRIHEKEEETEKIYRGEAVRKGTPECSQ----- 531
Query: 98 QGLSCASAPWKLALQKEARVLKRGG 122
PWK+ +K RGG
Sbjct: 532 --------PWKIYSRKTTTQSLRGG 548
>gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo
sapiens]
Length = 368
Score = 28.5 bits (62), Expect = 2.1
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 14/103 (13%)
Query: 12 MMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHK 71
++ EQQPS EG R +A G E + G A+ +
Sbjct: 127 VVASEQQPSAAREGNRG-----------DATDDVVMGVHEELLI---GPQVEEAARGVVR 172
Query: 72 RRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKE 114
GE + GE + +WG+G+ EQG S L KE
Sbjct: 173 AGGEGVAVGEELQDTGPRWGEGEGEEQGREPGSGNTTGTLGKE 215
>gi|239749205 PREDICTED: hypothetical protein XP_002346953 [Homo
sapiens]
Length = 261
Score = 28.5 bits (62), Expect = 2.1
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 14/103 (13%)
Query: 12 MMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHK 71
++ EQQPS EG R +A G E + G A+ +
Sbjct: 127 VVASEQQPSAAREGNRG-----------DATDDVVMGVHEELLI---GPQVEEAARGVVR 172
Query: 72 RRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKE 114
GE + GE + +WG+G+ EQG S L KE
Sbjct: 173 AGGEGVAVGEELQDTGPRWGEGEGEEQGREPGSGNTTGTLGKE 215
>gi|239743285 PREDICTED: hypothetical protein XP_002342817 [Homo
sapiens]
Length = 261
Score = 28.5 bits (62), Expect = 2.1
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 14/103 (13%)
Query: 12 MMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHK 71
++ EQQPS EG R +A G E + G A+ +
Sbjct: 127 VVASEQQPSAAREGNRG-----------DATDDVVMGVHEELLI---GPQVEEAARGVVR 172
Query: 72 RRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKE 114
GE + GE + +WG+G+ EQG S L KE
Sbjct: 173 AGGEGVAVGEELQDTGPRWGEGEGEEQGREPGSGNTTGTLGKE 215
>gi|239508969 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 28.5 bits (62), Expect = 2.1
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 14/103 (13%)
Query: 12 MMPKEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHK 71
++ EQQPS EG R +A G E + G A+ +
Sbjct: 127 VVASEQQPSAAREGNRG-----------DATDDVVMGVHEELLI---GPQVEEAARGVVR 172
Query: 72 RRGESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKE 114
GE + GE + +WG+G+ EQG S L KE
Sbjct: 173 AGGEGVAVGEELQDTGPRWGEGEGEEQGREPGSGNTTGTLGKE 215
>gi|116517332 STG protein [Homo sapiens]
Length = 325
Score = 28.5 bits (62), Expect = 2.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 51 EPTNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKWG 91
+P +G ++R G + R GS+G R G WG
Sbjct: 244 QPPGTSWGNINRYPGGSWGNINRYPGGSWGNINRYPGGSWG 284
>gi|239755121 PREDICTED: hypothetical protein [Homo sapiens]
Length = 339
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 40 EAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGESGSYGEAK-RKGAGKWGQGQWREQ 98
+ E + PR P R G ++RAG R+H++ + + A+ R G+ + G G+ R
Sbjct: 216 QVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCR-- 273
Query: 99 GLSCASAPWK 108
C W+
Sbjct: 274 ---CPRGYWR 280
>gi|239749649 PREDICTED: hypothetical protein [Homo sapiens]
Length = 339
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 40 EAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGESGSYGEAK-RKGAGKWGQGQWREQ 98
+ E + PR P R G ++RAG R+H++ + + A+ R G+ + G G+ R
Sbjct: 216 QVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCR-- 273
Query: 99 GLSCASAPWK 108
C W+
Sbjct: 274 ---CPRGYWR 280
>gi|239743922 PREDICTED: hypothetical protein XP_002342991 [Homo
sapiens]
Length = 339
Score = 28.1 bits (61), Expect = 2.8
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 40 EAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRGESGSYGEAK-RKGAGKWGQGQWREQ 98
+ E + PR P R G ++RAG R+H++ + + A+ R G+ + G G+ R
Sbjct: 216 QVEDVAARVPRAPAAARPGRRAQRAGGGRAHRQAVQRRVHLHAEARPGSERAGCGRCR-- 273
Query: 99 GLSCASAPWK 108
C W+
Sbjct: 274 ---CPRGYWR 280
>gi|221136876 Ras association (RalGDS/AF-6) domain family
(N-terminal) member 7 isoform 3 [Homo sapiens]
Length = 320
Score = 28.1 bits (61), Expect = 2.8
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 39 EEAESYTEKGPREP--------TNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKW 90
E A S + GP P T+LR GL R QR+ + G + + R+ +
Sbjct: 131 EPAPSLSRPGPAAPVTPTPGCCTDLR--GLELRV--QRNAEELGHEAFWEQELRREQARE 186
Query: 91 GQGQWREQGLSCASAPWKL---ALQKEARVLK 119
+GQ R Q LS A+A AL +AR L+
Sbjct: 187 REGQARLQALSAATAEHAARLQALDAQARALE 218
>gi|221136872 Ras association (RalGDS/AF-6) domain family
(N-terminal) member 7 isoform 2 [Homo sapiens]
Length = 337
Score = 28.1 bits (61), Expect = 2.8
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 39 EEAESYTEKGPREP--------TNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKW 90
E A S + GP P T+LR GL R QR+ + G + + R+ +
Sbjct: 131 EPAPSLSRPGPAAPVTPTPGCCTDLR--GLELRV--QRNAEELGHEAFWEQELRREQARE 186
Query: 91 GQGQWREQGLSCASAPWKL---ALQKEARVLK 119
+GQ R Q LS A+A AL +AR L+
Sbjct: 187 REGQARLQALSAATAEHAARLQALDAQARALE 218
>gi|4502483 Ras association (RalGDS/AF-6) domain family (N-terminal)
member 7 isoform 1 [Homo sapiens]
Length = 373
Score = 28.1 bits (61), Expect = 2.8
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 39 EEAESYTEKGPREP--------TNLRYGGLSRRAGAQRSHKRRGESGSYGEAKRKGAGKW 90
E A S + GP P T+LR GL R QR+ + G + + R+ +
Sbjct: 131 EPAPSLSRPGPAAPVTPTPGCCTDLR--GLELRV--QRNAEELGHEAFWEQELRREQARE 186
Query: 91 GQGQWREQGLSCASAPWKL---ALQKEARVLK 119
+GQ R Q LS A+A AL +AR L+
Sbjct: 187 REGQARLQALSAATAEHAARLQALDAQARALE 218
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 28.1 bits (61), Expect = 2.8
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 15 KEQQPSKRSEGRRSCFFFHRRECREEAESYTEKGPREPTNLRYGGLSRRAGAQRSHKRRG 74
+ ++ RS GR + R R ++S T + P LR S ++RS RR
Sbjct: 79 RRKRSRSRSRGRGKSY----RVQRSRSKSRTRRSRSRP-RLR----SHSRSSERSSHRRT 129
Query: 75 ESGSYGEAKRKGAGKWGQGQWREQGLSCASAPWKLALQKEARVLKRG--GSVRTKSQDLE 132
S S +RKG K + + +++G KE +KRG G+++ + L
Sbjct: 130 RSRSRDRERRKGRDKEKREKEKDKG-----------KDKELHNIKRGESGNIKAGLEHLP 178
Query: 133 P 133
P
Sbjct: 179 P 179
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,443,386
Number of Sequences: 37866
Number of extensions: 300392
Number of successful extensions: 917
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 880
Number of HSP's gapped (non-prelim): 95
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.