Guide to the Human Genome
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Name: RASSF7 Sequence: fasta or formatted (373aa) NCBI GI: 4502483
Description:

Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 isoform 1

Referenced in:

Ras

Other entries for this name:
alt prot [337aa] Ras association (RalGDS/AF-6) domain family (N-terminal) member 7...
alt prot [320aa] Ras association (RalGDS/AF-6) domain family (N-terminal) member 7...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.5         58           3
 C cysteine            2.9         11           2
 D aspartate           2.1          8           1
 E glutamate           9.9         37           2
 F phenylalanine       1.3          5           1
 G glycine             6.7         25           2
 H histidine           1.3          5           1
 I isoleucine          1.3          5           1
 K lysine              1.1          4           1
 L leucine            12.3         46           2
 M methionine          0.8          3           1
 N asparagine          0.8          3           1
 P proline            10.7         40           4
 Q glutamine           9.4         35           2
 R arginine            9.1         34           2
 S serine              4.8         18           2
 T threonine           3.8         14           2
 V valine              5.1         19           2
 W tryptophan          0.8          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras association (RalGDS/AF-6) domain family (N-termin... 
RASSF7                0.841   Ras association (RalGDS/AF-6) domain family (N-term...
RASSF7                0.838   Ras association (RalGDS/AF-6) domain family (N-term...
RASSF8                0.219   Ras association (RalGDS/AF-6) domain family (N-termi...
EP400                 0.031   E1A binding protein p400 
GCC1                  0.031   Golgi coiled-coil protein 1 
GOLGA1                0.031   golgin 97 
MAP7                  0.029   microtubule-associated protein 7 
ARHGEF18              0.028   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.028   Rho/Rac guanine nucleotide exchange factor 18 isofor...
MINK1                 0.028   misshapen/NIK-related kinase isoform 2 
MINK1                 0.028   misshapen/NIK-related kinase isoform 3 
MINK1                 0.028   misshapen/NIK-related kinase isoform 1 
DEF6                  0.025   differentially expressed in FDCP 6 homolog 
MINK1                 0.025   misshapen/NIK-related kinase isoform 4 
PLEC1                 0.025   plectin 1 isoform 11 
PLEC1                 0.025   plectin 1 isoform 10 
PLEC1                 0.025   plectin 1 isoform 8 
PLEC1                 0.025   plectin 1 isoform 7 
PLEC1                 0.025   plectin 1 isoform 6 
PLEC1                 0.025   plectin 1 isoform 3 
PLEC1                 0.025   plectin 1 isoform 2 
PLEC1                 0.025   plectin 1 isoform 1 
MAP4K4                0.025   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.025   mitogen-activated protein kinase kinase kinase kinas...
FSCB                  0.025   fibrous sheath CABYR binding protein 
MAP4K4                0.024   mitogen-activated protein kinase kinase kinase kinas...
CCDC88B               0.024   coiled-coil domain containing 88 
CEP250                0.024   centrosomal protein 2 
NCOR2                 0.024   nuclear receptor co-repressor 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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