Guide to the Human Genome
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Name: RASSF7 Sequence: fasta or formatted (337aa) NCBI GI: 221136872
Description:

Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 isoform 2

Referenced in:

Ras

Other entries for this name:
alt prot [320aa] Ras association (RalGDS/AF-6) domain family (N-terminal) member 7...
alt prot [373aa] Ras association (RalGDS/AF-6) domain family (N-terminal) member 7...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.6         46           2
 C cysteine            3.0         10           2
 D aspartate           2.1          7           1
 E glutamate           9.5         32           2
 F phenylalanine       1.5          5           1
 G glycine             7.1         24           3
 H histidine           0.9          3           1
 I isoleucine          1.5          5           1
 K lysine              1.2          4           1
 L leucine            11.9         40           2
 M methionine          0.9          3           1
 N asparagine          0.9          3           1
 P proline             9.5         32           4
 Q glutamine           9.5         32           2
 R arginine            9.5         32           2
 S serine              5.0         17           2
 T threonine           4.7         16           2
 V valine              6.5         22           2
 W tryptophan          1.2          4           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras association (RalGDS/AF-6) domain family (N-term... 
RASSF7                0.932   Ras association (RalGDS/AF-6) domain family (N-term...
RASSF7                0.932   Ras association (RalGDS/AF-6) domain family (N-termin...
RASSF8                0.243   Ras association (RalGDS/AF-6) domain family (N-termi...
GCC1                  0.034   Golgi coiled-coil protein 1 
GOLGA1                0.034   golgin 97 
CEP250                0.029   centrosomal protein 2 
MAP7                  0.028   microtubule-associated protein 7 
ARHGEF18              0.028   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.028   Rho/Rac guanine nucleotide exchange factor 18 isofor...
PLEC1                 0.028   plectin 1 isoform 11 
PLEC1                 0.028   plectin 1 isoform 10 
PLEC1                 0.028   plectin 1 isoform 8 
PLEC1                 0.028   plectin 1 isoform 7 
PLEC1                 0.028   plectin 1 isoform 6 
PLEC1                 0.028   plectin 1 isoform 3 
PLEC1                 0.028   plectin 1 isoform 2 
PLEC1                 0.028   plectin 1 isoform 1 
CCDC88B               0.026   coiled-coil domain containing 88 
CROCC                 0.025   ciliary rootlet coiled-coil 
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
SYNM                  0.025   desmuslin isoform B 
SYNM                  0.025   desmuslin isoform A 
EPS15L1               0.025   epidermal growth factor receptor pathway substrate 1...
MAP7D1                0.025   MAP7 domain containing 1 
MYH10                 0.025   myosin, heavy polypeptide 10, non-muscle 
MYH7B                 0.023   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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