Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 116812577
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116812577 LUC7-like 2 [Homo sapiens]
(392 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116812577 LUC7-like 2 [Homo sapiens] 770 0.0
gi|41393554 LUC7-like isoform b [Homo sapiens] 540 e-154
gi|8922297 LUC7-like isoform a [Homo sapiens] 523 e-148
gi|52426743 cisplatin resistance-associated overexpressed protei... 241 8e-64
gi|19923485 cisplatin resistance-associated overexpressed protei... 241 8e-64
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 99 9e-21
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 97 3e-20
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 96 7e-20
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 95 1e-19
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 92 6e-19
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 91 2e-18
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 91 2e-18
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 91 2e-18
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 89 5e-18
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 89 5e-18
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 87 3e-17
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 85 1e-16
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 85 1e-16
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 85 1e-16
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 85 1e-16
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 85 1e-16
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 84 2e-16
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 82 6e-16
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 82 6e-16
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 82 8e-16
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 81 2e-15
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 79 7e-15
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 78 2e-14
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 78 2e-14
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 77 2e-14
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 770 bits (1989), Expect = 0.0
Identities = 392/392 (100%), Positives = 392/392 (100%)
Query: 1 MSAQAQMRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECL 60
MSAQAQMRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECL
Sbjct: 1 MSAQAQMRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECL 60
Query: 61 KVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVA 120
KVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVA
Sbjct: 61 KVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVA 120
Query: 121 AKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPAS 180
AKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPAS
Sbjct: 121 AKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPAS 180
Query: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRN 240
SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRN
Sbjct: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRN 240
Query: 241 QERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKR 300
QERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKR
Sbjct: 241 QERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKR 300
Query: 301 HRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPR 360
HRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPR
Sbjct: 301 HRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPR 360
Query: 361 DRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
DRDRKDKKRSYESANGRSEDRRSSEEREAGEI
Sbjct: 361 DRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
>gi|41393554 LUC7-like isoform b [Homo sapiens]
Length = 371
Score = 540 bits (1391), Expect = e-154
Identities = 286/392 (72%), Positives = 334/392 (85%), Gaps = 21/392 (5%)
Query: 1 MSAQAQMRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECL 60
MSAQAQMRA+LDQLMGT+RDGD TRQR+KF+DDRVCKSHLL+CCPHD+L+GTRMDLGEC
Sbjct: 1 MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT 60
Query: 61 KVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVA 120
K+HDLALRADYEIASKE+D FFELDAMDHL+SFIA+CDRRTE+AKKRLAETQEEISAEV+
Sbjct: 61 KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS 120
Query: 121 AKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPAS 180
AKAE+VHELNEEIGKLLAK EQLGAEGNV+ESQK++ EVEK RAKK+EAEE YRNSMPAS
Sbjct: 121 AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS 180
Query: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRN 240
SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFI+IREKL++L++ VAEKQEKRN
Sbjct: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN 240
Query: 241 QERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKR 300
Q+RL+RREEREREER RRS S +++ +RSRSR+ RR RSRS SRER++ +RS+SR++
Sbjct: 241 QDRLRRREEREREERLS-RRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRH 299
Query: 301 HRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPR 360
RHRSR SRS SR H+R +SRDRS +K + S+ER ++ S + RS +R P
Sbjct: 300 RRHRSR--SRSHSRGHRR---ASRDRS---AKYKFSRERASREE--SWESGRS--ERGPP 347
Query: 361 DRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
D ES+NG+ RR SEE+EAGEI
Sbjct: 348 D-------WRLESSNGKMASRR-SEEKEAGEI 371
>gi|8922297 LUC7-like isoform a [Homo sapiens]
Length = 325
Score = 523 bits (1346), Expect = e-148
Identities = 262/327 (80%), Positives = 300/327 (91%), Gaps = 6/327 (1%)
Query: 1 MSAQAQMRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECL 60
MSAQAQMRA+LDQLMGT+RDGD TRQR+KF+DDRVCKSHLL+CCPHD+L+GTRMDLGEC
Sbjct: 1 MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT 60
Query: 61 KVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVA 120
K+HDLALRADYEIASKE+D FFELDAMDHL+SFIA+CDRRTE+AKKRLAETQEEISAEV+
Sbjct: 61 KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS 120
Query: 121 AKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPAS 180
AKAE+VHELNEEIGKLLAK EQLGAEGNV+ESQK++ EVEK RAKK+EAEE YRNSMPAS
Sbjct: 121 AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS 180
Query: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRN 240
SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFI+IREKL++L++ VAEKQEKRN
Sbjct: 181 SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN 240
Query: 241 QERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKR 300
Q+RL+RREEREREER RRS S +++ +RSRSR+ RR RSRS SRER++ +RS+SR++
Sbjct: 241 QDRLRRREEREREERLS-RRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRH 299
Query: 301 HRHRSRSSSRSRSRSHQRSRHSSRDRS 327
RHRSRS RS SR H+R +SRDRS
Sbjct: 300 RRHRSRS--RSHSRGHRR---ASRDRS 321
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 241 bits (615), Expect = 8e-64
Identities = 144/391 (36%), Positives = 229/391 (58%), Gaps = 23/391 (5%)
Query: 10 MLDQLMGTSRD--GDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLAL 67
+LD+LMG R+ D R +++ + VCK +L CP ++ + TR DLG C K+HD L
Sbjct: 7 LLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENL 66
Query: 68 RADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKA---- 123
R YE +S+ +E D + +LQS +A+ +RR RLA +Q + S+ A
Sbjct: 67 RKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNE 126
Query: 124 ERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQ 183
E++ L ++I LL ++E+LG+EG VEE+Q +M VE+ + ++RE +++ + + Q
Sbjct: 127 EKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLK-EERELLRSTTSTIESFAAQ 185
Query: 184 QQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQER 243
++++ VCEVC A+L + D R+ DH GK H+G+ +I+ +EELK + ++ E+ +++
Sbjct: 186 EKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDE 245
Query: 244 LKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRH 303
++E++EREEREK R R + ++ R E R + R+ RER++R+RS+S RH
Sbjct: 246 RLKKEKQEREEREK-EREREREERERKRRREEEEREKERARDRERRKRSRSRS-----RH 299
Query: 304 RSRSSSR--SRSRSHQRSRHSSRDRSRERSKRRS-------SKERFRDQD-LASCDRDRS 353
SR+S R SRSR H+RSR R RSR R +RRS K R R +D S RDR
Sbjct: 300 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 359
Query: 354 SRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
S + RDR+ ++S E S+D++SS
Sbjct: 360 SYKHRSKSRDREQDRKSKEKEKRGSDDKKSS 390
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 241 bits (615), Expect = 8e-64
Identities = 144/391 (36%), Positives = 229/391 (58%), Gaps = 23/391 (5%)
Query: 10 MLDQLMGTSRD--GDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLAL 67
+LD+LMG R+ D R +++ + VCK +L CP ++ + TR DLG C K+HD L
Sbjct: 7 LLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENL 66
Query: 68 RADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKA---- 123
R YE +S+ +E D + +LQS +A+ +RR RLA +Q + S+ A
Sbjct: 67 RKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNE 126
Query: 124 ERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQ 183
E++ L ++I LL ++E+LG+EG VEE+Q +M VE+ + ++RE +++ + + Q
Sbjct: 127 EKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLK-EERELLRSTTSTIESFAAQ 185
Query: 184 QQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQER 243
++++ VCEVC A+L + D R+ DH GK H+G+ +I+ +EELK + ++ E+ +++
Sbjct: 186 EKQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDE 245
Query: 244 LKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRH 303
++E++EREEREK R R + ++ R E R + R+ RER++R+RS+S RH
Sbjct: 246 RLKKEKQEREEREK-EREREREERERKRRREEEEREKERARDRERRKRSRSRS-----RH 299
Query: 304 RSRSSSR--SRSRSHQRSRHSSRDRSRERSKRRS-------SKERFRDQD-LASCDRDRS 353
SR+S R SRSR H+RSR R RSR R +RRS K R R +D S RDR
Sbjct: 300 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 359
Query: 354 SRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
S + RDR+ ++S E S+D++SS
Sbjct: 360 SYKHRSKSRDREQDRKSKEKEKRGSDDKKSS 390
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 98.6 bits (244), Expect = 9e-21
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 15/251 (5%)
Query: 140 VEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGL 199
+E L E + E + + R KK+E +E P + L E +A + +
Sbjct: 211 IEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINA-IEM 269
Query: 200 HDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREERERE-EREKL 258
++ R L K F + +KLEE K K+EK QE K R ERERE ERE+
Sbjct: 270 EEDKRDLISREISK----FRDTHKKLEEEKG----KKEKERQEIEKERRERERERERERE 321
Query: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQR 318
RR R + +R R +E R R R R+R R T+ + R+ R R R R R RS +
Sbjct: 322 RREREREREREREREKEKERERERERDRDRDR-TKERDRD-RDRERDRDRDRERSSDRNK 379
Query: 319 SRHSSRDRSRERSKRRS-SKERFRDQDLASCDRDRSSRDRSPRDRDR-KDKKRSYESANG 376
R SR++SR+R + R +ER R+++ +R+R R+R+R KDKKR E
Sbjct: 380 DRSRSREKSRDRERERERERERERERE-REREREREREREREREREREKDKKRDREEDEE 438
Query: 377 RSEDRRSSEER 387
+ +RR E +
Sbjct: 439 DAYERRKLERK 449
Score = 85.9 bits (211), Expect = 6e-17
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRRE-EREREEREKLRRSRSHSKNPKRSRSREHRRHR 280
REK +E +R E++ R+++R K R+ +R+RE R RS +N RSRSRE R R
Sbjct: 335 REKEKERER---ERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDR 391
Query: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERF 340
R RER+R +R R R R R R R +R R + R RE + + + R
Sbjct: 392 ERERERERER------EREREREREREREREREREREREREKDKKRDREEDEEDAYERRK 445
Query: 341 RDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREA 389
++ L + R ++ R+RK K R YE R E+RR +EA
Sbjct: 446 LERKLREKEAAYQERLKNWEIRERK-KTREYEKEAEREEERRREMAKEA 493
Score = 85.5 bits (210), Expect = 8e-17
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 213 KLHLGFIEIREKLEEL--KRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKR 270
K + IE+ E +L + + + + E K ++E+ER+E EK RR R +R
Sbjct: 261 KEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRER------ER 314
Query: 271 SRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER 330
R RE R R R RER+R + +R R R R R++ R R R RDR RER
Sbjct: 315 ERERERER-REREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRER 373
Query: 331 SKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDR---KDKKRSYESANGRSEDRRSSEER 387
S R +K+R R ++ S DR+R R+R+R ++++R E R +R ++R
Sbjct: 374 SSDR-NKDRSRSRE-KSRDREREREREREREREREREREREREREREREREREREKDKKR 431
Query: 388 EAGE 391
+ E
Sbjct: 432 DREE 435
Score = 58.2 bits (139), Expect = 1e-08
Identities = 59/217 (27%), Positives = 79/217 (36%), Gaps = 62/217 (28%)
Query: 232 VAEKQEKRNQERLKRREEREREEREKLRR------------SRSHSKNPKRSR------- 272
V E+ E KRR++ + E L R S SH + K+ +
Sbjct: 188 VTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRR 247
Query: 273 ------------------------------SREHRRHRSRSMSRERKRRTRSKSR---EK 299
SRE + R E ++ + K R EK
Sbjct: 248 FPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEK 307
Query: 300 RHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRS-SKERFRDQDLASCDRDRSSRDRS 358
R R R R R R +R R R+R RE+ K R +ER RD+D +RDR
Sbjct: 308 ERRERERERERERER-REREREREREREREKEKERERERERDRDRDRTK-ERDRDRDRER 365
Query: 359 PRDRDR-------KDKKRSYESANGRSEDRRSSEERE 388
RDRDR KD+ RS E + R +R ERE
Sbjct: 366 DRDRDRERSSDRNKDRSRSREKSRDRERERERERERE 402
Score = 57.0 bits (136), Expect = 3e-08
Identities = 66/295 (22%), Positives = 119/295 (40%), Gaps = 33/295 (11%)
Query: 111 TQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAE-GNVEESQKVMDEVEKARAKKREA 169
T+E+I+A + + ++ ++ EI K ++L E G E+ ++ +++ + R ++RE
Sbjct: 260 TKEDINA-IEMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERER 318
Query: 170 EEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELK 229
E R ++++ + E D DR RE+ +
Sbjct: 319 ERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRN 378
Query: 230 RVVAEKQEK-----RNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSM 284
+ + +EK R +ER + RE ERE R R + +R R RE + R R
Sbjct: 379 KDRSRSREKSRDRERERERERERERERERERE---REREREREREREREREKDKKRDREE 435
Query: 285 SRE---RKRRTRSKSREKRHRHRSRSSS-----RSRSRSHQRSRHSSRDRSRERSKR--- 333
E +R+ K REK ++ R + R ++R +++ +R RE +K
Sbjct: 436 DEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKR 495
Query: 334 -----------RSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGR 377
R + +R L RDR ++ +RDRK +K E R
Sbjct: 496 LKEFLEDYDDDRDDPKYYRGSALQKRLRDR-EKEMEADERDRKREKEELEEIRQR 549
Score = 53.5 bits (127), Expect = 3e-07
Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 64/335 (19%)
Query: 110 ETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREA 169
+ ++ IS E++ + +L EE GK + +++ E E ++ + + R ++RE
Sbjct: 272 DKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERRERERERER 331
Query: 170 E---EVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDR---RLADHFGGKLHLGFIEIRE 223
E E + + + R E D DR R +D + RE
Sbjct: 332 EREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRS-----RE 386
Query: 224 KLEELKRVVAEKQEKRNQERLKRRE-EREREEREKLRRSRSHSKNPKRSRSR------EH 276
K + +R E++ +R +ER + RE ERERE + R R K+ KR R E
Sbjct: 387 KSRDRER---EREREREREREREREREREREREREREREREREKDKKRDREEDEEDAYER 443
Query: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSS------------- 323
R+ + +E + R K+ E R R ++R + R +R R +
Sbjct: 444 RKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDY 503
Query: 324 ------------------------------RDRSRERSKRRSSKERFRDQDLASCDRDRS 353
RDR RE+ + ++R + D +
Sbjct: 504 DDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQ 563
Query: 354 SRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
++ R + K+ ES E + E+RE
Sbjct: 564 RMEQEAERRRQPQIKQEPESEEEEEEKQEKEEKRE 598
Score = 37.7 bits (86), Expect = 0.018
Identities = 45/210 (21%), Positives = 78/210 (37%), Gaps = 17/210 (8%)
Query: 98 DRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMD 157
+R E ++R E + E E +R E +EE K+E+ E +++ +
Sbjct: 404 EREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKN 463
Query: 158 EVEKARAKKREAE-EVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHL 216
+ R K RE E E R ++ R+ E Y D+DR ++ G
Sbjct: 464 WEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDY----DDDRDDPKYYRGSALQ 519
Query: 217 GFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREH 276
+ REK E ER ++RE+ E EE + + H + E
Sbjct: 520 KRLRDREK------------EMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQ 567
Query: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSR 306
R R +++ + + EK+ + R
Sbjct: 568 EAERRRQPQIKQEPESEEEEEEKQEKEEKR 597
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 97.1 bits (240), Expect = 3e-20
Identities = 83/318 (26%), Positives = 136/318 (42%), Gaps = 49/318 (15%)
Query: 96 DCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKV 155
D +R+ + + R E + E + + + ER E K E +E E ++
Sbjct: 164 DRERQRQTERNRQKEREREKNRQERRERERQREKEN-------KTEDRHSERGRERERER 216
Query: 156 MDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLH 215
E E R ++ + E R+ + +++K E S D +R
Sbjct: 217 ETETETERKRQTDRE---RDRQRKTEREREKQAERERASERETERDKERE---------- 263
Query: 216 LGFIEIREKLEELKRVVAEKQEKRNQERLK-RREEREREEREKLRRSRSHSKNPKRSRSR 274
RE+ + R +K+ +R +R + RR ER+RE K R R + +R+R R
Sbjct: 264 ------RERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKR 317
Query: 275 EHRRHRSRSMSRERK-RRTRSKSREKRH-------RHRSRSSSRSRSRSHQRSRHSSRDR 326
E R R R R+R+ R R K RE++ R R+R + R R +R R R+R
Sbjct: 318 ERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERER 377
Query: 327 SRERSKRRSSKERFRDQD-------LASCDRD--RSSRDRSPRDRDR-----KDKKRSYE 372
R+ ++ R +ER RD+D DRD R + + R++DR +++ R E
Sbjct: 378 DRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGRERE 437
Query: 373 SANGRSEDRRSSEEREAG 390
GR DR +R+AG
Sbjct: 438 KQKGRERDRERQTDRQAG 455
Score = 93.6 bits (231), Expect = 3e-19
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 37/310 (11%)
Query: 96 DCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKV 155
+ +R E + R + Q E + A+ ER + + E + + Q E E++++
Sbjct: 130 ETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQ--KEREREKNRQE 187
Query: 156 MDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLH 215
E E+ R K+ + E+ R+S ++++ E + DR+
Sbjct: 188 RRERERQREKENKTED--RHSERGRERERERETETETERKRQTDRERDRQRKTE------ 239
Query: 216 LGFIEIREKLEELKRVVAEKQEKRNQERLKRRE-EREREEREKLRRSRSHSKNPKRS-RS 273
REK E +R +E++ +R++ER + R+ +R+R+ R+K R ++ K +R+ R
Sbjct: 240 ----REREKQAERERA-SERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERD 294
Query: 274 REHRRHRSRSMSRERKR-RTRSKSREK---RHRHRSRSSSRSRSRSHQRSRHSSRDRSRE 329
RE R R R RER+R R R + RE+ R R R R + R R + +R R + RE
Sbjct: 295 RETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRE 354
Query: 330 RS-------KRRSSKERFRDQDLASCDRDR-SSRDRSPRDRDR---KDKKRSYESANGRS 378
R+ +R++ +ER R++ +RDR S+R+R R+RDR + K+R ++ R
Sbjct: 355 RNRQTGREGRRQAERERERER-----ERDRQSAREREERERDRDRDRQKERERQTEKDRD 409
Query: 379 EDRRSSEERE 388
R + ++RE
Sbjct: 410 GQRETEKQRE 419
Score = 92.4 bits (228), Expect = 6e-19
Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 11/298 (3%)
Query: 98 DRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMD 157
DR + +++ Q+E E + ER + + + + E + ++
Sbjct: 110 DRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQR 169
Query: 158 EVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLH-DNDRRLADHFGGKLHL 216
+ E+ R K+RE E+ R Q++K E + G + +R K
Sbjct: 170 QTERNRQKEREREK-NRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQT 228
Query: 217 GFIEIREKLEELKRVVAEKQEKRNQERLKRREERERE-EREKLRRSRSHSKNPKRSRSRE 275
R++ E +R ++E+ ++ +R +ERERE +R++ R R + + R R+
Sbjct: 229 DRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQ 288
Query: 276 HRRHRSRSMSRERKR-RTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERS--- 331
R R R R+R+R R R + RE R+R R R R R +R R + RDR +ER
Sbjct: 289 RRTERDRETERKRERQRERERERE---RNRKRERERERERERERQRETERDREKERERKR 345
Query: 332 KRRSSKERFRDQDLASCDRDRSSRDRS-PRDRDRKDKKRSYESANGRSEDRRSSEERE 388
KR++ +R R++ R ++ R+R R+RDR+ + E R DR+ ER+
Sbjct: 346 KRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQ 403
Score = 87.0 bits (214), Expect = 3e-17
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREERERE-EREKLR-RSRSHSKNPKRSRSREHRRH 279
R++ +E +R +++++ ++ R++ERERE ERE R R R +R R R+ +
Sbjct: 99 RDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKE 158
Query: 280 RSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQR-----SRHSSRDRSRERS--- 331
R R RER+R+T +++R R ++R R R R ++ RHS R R RER
Sbjct: 159 RERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERET 218
Query: 332 ------KRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSE 385
KR++ +ER R + ++ R+R+ +DK+R E R DRR E
Sbjct: 219 ETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKE 278
Score = 85.1 bits (209), Expect = 1e-16
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKR-RT 292
+++ R +ER +RRE+R+ E +R R K+ R R R R R R RER+ R
Sbjct: 53 DRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRE 112
Query: 293 RSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR-SSKERFRDQD---LASC 348
R + REK R+R + R R +R R D RER ++R + KER R D
Sbjct: 113 RDRQREK-ERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQT 171
Query: 349 DRDR-SSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
+R+R R+R ++R++++R E N ++EDR S RE
Sbjct: 172 ERNRQKEREREKNRQERRERERQREKEN-KTEDRHSERGRE 211
Score = 84.7 bits (208), Expect = 1e-16
Identities = 75/308 (24%), Positives = 125/308 (40%), Gaps = 24/308 (7%)
Query: 98 DRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMD 157
DR E + R E + + E + E+ +E + + E+ G G ++ +
Sbjct: 92 DRHRERQRDREKERERQTDRERDRQREKERNRQKERER---ETEREGERGRDRQTDGQRE 148
Query: 158 EVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
+ A+K + R + +QK R E + R + K
Sbjct: 149 RERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKEN----KTEDR 204
Query: 218 FIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREK-LRRSRSHSKNPKRSRSREH 276
E + E + E + KR +R + R+ + EREK R R+ + +R + RE
Sbjct: 205 HSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERER 264
Query: 277 RRHRSRSMSRERKRRTRSKSREK-----RHRHRSRSSSRSRSRSHQRSRHSSRDRSRERS 331
R R R R +K R R R++ R R R R R R +R R+ R+R RER
Sbjct: 265 ERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERE 324
Query: 332 KRRS-SKERFRDQDLASCDRDRSSRDRSPRDRDRK-------DKKRSYESANGRSEDRRS 383
+ R +E RD++ +R+R + ++ DR+R ++ E R DR+S
Sbjct: 325 RERERQRETERDREK---ERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQS 381
Query: 384 SEEREAGE 391
+ ERE E
Sbjct: 382 AREREERE 389
Score = 79.3 bits (194), Expect = 5e-15
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREERERE---EREKLR-----RSRSHSKNPKRS 271
E R + + +R K+E+R ++ R+ +R RE +REK R R R + +R+
Sbjct: 63 ERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERN 122
Query: 272 RSREHRRHRSRSMSRERKRRTRSKSREKRHR----HRSRSSSRSRSRSHQRSRHSSRDRS 327
R +E R R R R R+T + +R R R R + R R R +R+R R+R
Sbjct: 123 RQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKERERE 182
Query: 328 RERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRK---DKKRSYESANGRSEDRRSS 384
+ R +RR ER R ++ + DR S R+R+R+ + +R ++ R R++
Sbjct: 183 KNRQERR---ERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTE 239
Query: 385 EERE 388
ERE
Sbjct: 240 RERE 243
Score = 76.6 bits (187), Expect = 3e-14
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRS 281
R + +E +R ++Q +R +R KR RE++ K R R ++ ++ R R+ R R
Sbjct: 56 RNRQKERERRREKRQTERETDR-KRERRREKDRHRKRDRHRERQRDREKERERQTDRERD 114
Query: 282 RSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
R +ER R+ + +R R R R +R R + ++R R+ + R +
Sbjct: 115 RQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERN 174
Query: 342 DQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
Q +++R R R R++++K S GR +R E E
Sbjct: 175 RQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETE 221
Score = 71.2 bits (173), Expect = 1e-12
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 245 KRREEREREEREKLRRSRSHSKNPKRSRSRE---HRRHRSRSMSRERKRRTRSKSREKRH 301
+R +E R L ++ + R R+R+ RR R RE R+ + + RH
Sbjct: 29 RRPGSQESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRH 88
Query: 302 RHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRS-SKERFRDQDL-ASCDRDRSSRDRSP 359
R R R R R R +R R + R+R R+R K R+ KER R+ + RDR + +
Sbjct: 89 RKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRE 148
Query: 360 RDRDR---KDKKRSYESANGRSEDRRSSEERE 388
R+R R K+++R + R +R +ERE
Sbjct: 149 RERQRDAEKERERQTDRERQRQTERNRQKERE 180
Score = 64.3 bits (155), Expect = 2e-10
Identities = 79/318 (24%), Positives = 130/318 (40%), Gaps = 50/318 (15%)
Query: 96 DCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKV 155
D R+TE +++ AE + E ER E + + + + E+ + +
Sbjct: 233 DRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTE 292
Query: 156 MD-EVEKARAKKREAE-EVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGK 213
D E E+ R ++RE E E RN ++++ R + + +R
Sbjct: 293 RDRETERKRERQRERERERERNRKRERERERERERERQ--------RETERD-------- 336
Query: 214 LHLGFIEIREKLEELKRV-VAEKQEKRNQE---RLKRREERERE-EREKLRRSRSHSKNP 268
REK E KR E +RN++ +R+ ERERE ERE+ R+S +
Sbjct: 337 --------REKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREER 388
Query: 269 KRSRSREHRRHRSRSMSRER-------KRRTRSKSRE-KRHRHRSRSSSRSRSRSHQRSR 320
+R R R+ ++ R R ++R K+R R K RE +R R R R + + R R R
Sbjct: 389 ERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRER 448
Query: 321 HSSRDRSRERSKRR---SSKERFRDQDLASCDRDRSSR----DRSPRDRDRKDKK----R 369
+ R R+R + + R + D +R +R SP D + R
Sbjct: 449 QTDRQAGRQRKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWKSSPEDPKAASTRFPWGR 508
Query: 370 SYESANGRSEDRRSSEER 387
+++ GR RR E R
Sbjct: 509 PAKASRGRVAGRRRWEPR 526
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 95.5 bits (236), Expect = 7e-20
Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 9/155 (5%)
Query: 229 KRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRER 288
KR + R+ R + RE R R + ++SRS S+ K+SRSR R +SRS SRER
Sbjct: 54 KRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER 113
Query: 289 KRRTRSKSREK-RHRHRSRSSSRSRSRSHQRSRHSSRDRSRERS-KRRSSKERFRDQDLA 346
KRR RS+SR + RHRHR+RS SR+RSRS R + + R RS R S FR ++ A
Sbjct: 114 KRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTA 173
Query: 347 SCDR-------DRSSRDRSPRDRDRKDKKRSYESA 374
+ +R+ + + R+++ +K++ E A
Sbjct: 174 MDAQEALARRLERAKKLQEQREKEMVEKQKQQEIA 208
Score = 84.3 bits (207), Expect = 2e-16
Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 234 EKQEKRNQERL---KRREEREREEREKLRRSRSHSKN---PKRSRSREHRRHRSRSMSRE 287
E + +ERL + E+R + + K R RSHS++ +R RSR R +SRS SRE
Sbjct: 33 EHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRE 92
Query: 288 RKRRTRSKSRE-KRHRHRSRSSSRS-RSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDL 345
RK+ +RS+SRE K+ R RSR R RSRS RSRH R RSR R++ RS + R +
Sbjct: 93 RKK-SRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKP 151
Query: 346 ASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
R S P R R + E+ R E + +E+ E+
Sbjct: 152 RRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEM 198
Score = 80.9 bits (198), Expect = 2e-15
Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTR 293
+ +K E +E + RE+L S + KR + R+ R RS S SR R+RR R
Sbjct: 19 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKR-KERKSSRGRSHSRSRSRERRHR 77
Query: 294 SKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRS 353
S+SRE R + RSRS R +SRS R R SR RSRER +R S+ R R + R RS
Sbjct: 78 SRSRE-RKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR---HRTRS 133
Query: 354 SRDRSPRDRDRK---DKKRSYESANGRS 378
R RDRK +K R + + R+
Sbjct: 134 RSRTRSRSRDRKKRIEKPRRFSRSLSRT 161
Score = 77.4 bits (189), Expect = 2e-14
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKR-RTR 293
KQ +R++ + K ++ + EE S + S RH+ + R R +R
Sbjct: 9 KQGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 68
Query: 294 SKSREKRHRHRSRS--SSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRD 351
S+SRE+RHR RSR SRSRSR ++SR SR+R + RS+ R K R R + +
Sbjct: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
Query: 352 RSSRDRS-PRDRDRKDKKR 369
+R RS R R R KKR
Sbjct: 129 HRTRSRSRTRSRSRDRKKR 147
Score = 70.5 bits (171), Expect = 3e-12
Identities = 50/140 (35%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRH------RSRSSSRSR 312
RR S K+ K+ +S EH + S + R+R S++ E RH+ R RS SRSR
Sbjct: 12 RRHESKDKSSKKHKSEEHN-DKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSR 70
Query: 313 S-----RSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDK 367
S RS R R SR RSRER K RS + S +R R R RS + +
Sbjct: 71 SRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHR 130
Query: 368 KRSYESANGRSEDRRSSEER 387
RS RS DR+ E+
Sbjct: 131 TRSRSRTRSRSRDRKKRIEK 150
Score = 64.7 bits (156), Expect = 1e-10
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPK-RSRSREHRRHR 280
RE+ + +K R++ER K R R RE ++ RSR + + RSRSR RHR
Sbjct: 72 RERRHRSRSRERKKSRSRSRERKKSRS-RSRERKKSRSRSRERKRRIRSRSRSRSRHRHR 130
Query: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERF 340
+RS SR R R K R ++ R SRS SR+ S R R+++ D ++R ++
Sbjct: 131 TRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKL 190
Query: 341 RDQ 343
++Q
Sbjct: 191 QEQ 193
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 95.1 bits (235), Expect = 1e-19
Identities = 95/391 (24%), Positives = 166/391 (42%), Gaps = 27/391 (6%)
Query: 19 RDGDTTRQRIKFSDDRVCK-SHLLNCCPHDVL-SGTRMDLGECLKVHDLALRADYEIASK 76
RD TR R + D R + S + D S D HD R + K
Sbjct: 459 RDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHRK 518
Query: 77 EQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKAE-RVHELNEE--I 133
E + E + + ++ + + RTE+ + E++ EI + ++ RV EL E+
Sbjct: 519 EDTYPEE--SRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSR 576
Query: 134 GKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQ-------- 185
G ++++ + N +S + + + R E R+ SSF+++
Sbjct: 577 GSRGSQIDSHSSNSNYHDSWETRSSYPE---RDRYPERDNRDQARDSSFERRHGERDRRD 633
Query: 186 -KLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERL 244
+ R S ND D + + ++ R E + E++ R +ER
Sbjct: 634 NRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRD-ERARERDRERERDRERERE 692
Query: 245 KRRE-EREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKR-----RTRSKSRE 298
+ RE +RERE+ +L R R+ + +R + R+ R R R RER+R R + + RE
Sbjct: 693 RERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERE 752
Query: 299 KRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRS 358
+ R R R R R R +R R +R+R +ER ++R +++ + +D R+ DR+
Sbjct: 753 REERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRN 812
Query: 359 PRD-RDRKDKKRSYESANGRSEDRRSSEERE 388
PRD D + K+ Y + S + RE
Sbjct: 813 PRDGHDERKSKKRYRNEGSPSPRQSPKRRRE 843
Score = 63.2 bits (152), Expect = 4e-10
Identities = 68/297 (22%), Positives = 111/297 (37%), Gaps = 57/297 (19%)
Query: 98 DRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMD 157
DRR E A++R E + + E + ER E +E
Sbjct: 670 DRRDERARERDRERERDRERERERERERDREREKE------------------------R 705
Query: 158 EVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
E+E+ RA++RE E + HD +R
Sbjct: 706 ELERERAREREREREKERDRERDRDRD---------------HDRERERERE-------- 742
Query: 218 FIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKN-PKRSRSREH 276
REK E +R E++ +R +ER +R ERERE + + R ++ + + R+
Sbjct: 743 --RDREKEREREREERERERERERER-ERERERERERARERDKERERQRDWEDKDKGRDD 799
Query: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 336
RR + + +R R R+ + R+R+ S R +R HS + ++
Sbjct: 800 RREKREEIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNE 859
Query: 337 KERFRDQDLASCDRDRSSRDRSPR--DRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
K R L+ R + SR SP DR+ + + + R E R EE+E E
Sbjct: 860 KHRL----LSQVVRPQESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKE 912
Score = 63.2 bits (152), Expect = 4e-10
Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 15/188 (7%)
Query: 200 HDNDRRLADHFGGK---LHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREERE 256
+D+ R D G+ LH G + REK + L+ + E++ + +Q +R E R
Sbjct: 1211 NDSAHRSGDDQSGRKRVLHSGSRD-REKTKSLE-ITGERKSRIDQ---LKRGEPSRSTSS 1265
Query: 257 KLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREK--RHRHRSRSSSRSRSR 314
+ SRSHS +RS R+ SRS S + + R + + R + R R R R +R R
Sbjct: 1266 DRQDSRSHSS--RRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREW 1323
Query: 315 SHQRSRHSSRDRSRERSKRRS-SKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 373
+ R+R R+R + R +ER + +DL +R+R D RDRDR D+ R++ES
Sbjct: 1324 DRDADKDWPRNRDRDRLRERERERERDKRRDL-DRERERLISDSVERDRDR-DRDRTFES 1381
Query: 374 ANGRSEDR 381
+ S R
Sbjct: 1382 SQIESVKR 1389
Score = 60.5 bits (145), Expect = 3e-09
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 239 RNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSRE 298
R QER + +RERE + R R ++ + R R R R RER+R R
Sbjct: 1298 RLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLDR 1357
Query: 299 KRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRS 358
+R R S S R R R R+ SS+ S +R + + E R D + +SRD
Sbjct: 1358 ERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHER-------DLESTSRDSL 1410
Query: 359 PRDRDRKDKKRSYESANGRSEDRRS--SEEREAGE 391
D++R DK S G E +S +E EAG+
Sbjct: 1411 ALDKERMDK--DLGSVQGFEETNKSERTESLEAGD 1443
Score = 55.8 bits (133), Expect = 6e-08
Identities = 94/340 (27%), Positives = 140/340 (41%), Gaps = 66/340 (19%)
Query: 110 ETQEEISAEVAAKAERVHELN-----EEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARA 164
ET + S + VHEL+ ++I + L K+EQ E E K E R+
Sbjct: 145 ETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRS 204
Query: 165 K-------KREAEEVYRNSMPASSFQQQKLR-VCEVCSAYLGLHDNDRRLADHFGGKLHL 216
K ++ ++ R S P SS +K R V S L N + G
Sbjct: 205 KLSPSPSLRKSSKSPKRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTP 264
Query: 217 G-------FIEIREKLEELKRVVAEKQEKRNQERLKRRE-EREREEREKLRR-------- 260
I + +K +E +V +EK + + R+ ER+RE+R+K R
Sbjct: 265 SPPPPIPEDIALGKKYKEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHH 324
Query: 261 ----SRSHSKNPKRSRSREH-----RRHRSRSMSRERK-----RRTRS----------KS 296
SR HS + + S + RR R+ S S +R RR+ S +
Sbjct: 325 SPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQR 384
Query: 297 REKRHRHRSRSSSRSR------SRSHQRSRHSSRDRSRERSKRR--SSKERFRDQDLASC 348
++ RHRS + R S+SH R RH R+ +R + R S +ER +QD +S
Sbjct: 385 KQSPPRHRSPMREKGRHDHERTSQSHDR-RHERREDTRGKRDREKDSREEREYEQDQSSS 443
Query: 349 DRDRSSRDRSPRD-RDRKDKKRSYESANGR-SEDRRSSEE 386
R DR PRD RDR+D + + + R S D R S E
Sbjct: 444 RDHRD--DREPRDGRDRRDARDTRDRRELRDSRDMRDSRE 481
Score = 53.5 bits (127), Expect = 3e-07
Identities = 52/174 (29%), Positives = 70/174 (40%), Gaps = 25/174 (14%)
Query: 223 EKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSR 282
EK+E + + Q + K +++ R +RSH+ RS S + HRS
Sbjct: 1166 EKVETPHVTIEDAQHR------KPMDQKRSSSLGSNRSNRSHTSGRLRSPSNDSA-HRSG 1218
Query: 283 SMSRERKR--------RTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR 334
RKR R ++KS E +SR R RS S R SR S RR
Sbjct: 1219 DDQSGRKRVLHSGSRDREKTKSLEITGERKSRIDQLKRGEP-SRSTSSDRQDSRSHSSRR 1277
Query: 335 SSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
SS E DR SR S RDR ++ YE R +RR + +RE
Sbjct: 1278 SSPE---------SDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQRE 1322
Score = 53.1 bits (126), Expect = 4e-07
Identities = 43/152 (28%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Query: 238 KRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSR 297
+ + ER + +R E RE R R K+ + R E + +S SR+ + R
Sbjct: 400 RHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYE----QDQSSSRDHR-----DDR 450
Query: 298 EKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDR 357
E R R + +R R R RD R R +KE +D S RDR
Sbjct: 451 EPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDR 510
Query: 358 SPRDRDRKDKKRSYESAN-GRSEDRRSSEERE 388
RD RK+ ES + GR+ R S E
Sbjct: 511 EGRDTHRKEDTYPEESRSYGRNHLREESSRTE 542
Score = 52.8 bits (125), Expect = 5e-07
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 262 RSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRH 321
+S K S SR+ + +S ++ ERK R R + R S SRS S +RS
Sbjct: 1221 QSGRKRVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSP 1280
Query: 322 SSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRD-----------RKDKKRS 370
S + RS S++R +++D DR+R R R R+ +D+ R
Sbjct: 1281 ESDRQVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRL 1340
Query: 371 YESANGRSEDRRSSEERE 388
E R D+R +RE
Sbjct: 1341 RERERERERDKRRDLDRE 1358
Score = 50.8 bits (120), Expect = 2e-06
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 221 IREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHR 280
+REK ++ ++R++ R R +R+RE+ R R + ++ +S SR+HR R
Sbjct: 395 MREKGRHDHERTSQSHDRRHERREDTRGKRDREKDS--REEREYEQD--QSSSRDHRDDR 450
Query: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRS-RSHQRSRHSSRDRSRERSKRRSSKER 339
R+ RR +R++R SR SR R + R SRD RS R
Sbjct: 451 EPRDGRD--RRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRD----- 503
Query: 340 FRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREA 389
A RDR RD ++ ++ RSY + R E R+ E+
Sbjct: 504 ------AHDYRDREGRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNES 547
Score = 48.9 bits (115), Expect = 8e-06
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 234 EKQEKRNQERLKRREEREREE------REKLRRSRSHSKNPKRSRS-REHRRHRSRSMSR 286
+++ + ++R R+ R+R E R R +S++ K SR R+ R R R
Sbjct: 449 DREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYR 508
Query: 287 ERKRRT----------------RSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSR-- 328
+R+ R R+ RE+ R R+ SR+ SRS R+ R R R
Sbjct: 509 DREGRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVP 568
Query: 329 ---ERSKRRSSKERFRDQDLASCDRD----RSS---RDRSPRDRDRKDKKR--SYESANG 376
E+ R S + S D RSS RDR P +RD +D+ R S+E +G
Sbjct: 569 ELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYP-ERDNRDQARDSSFERRHG 627
Query: 377 RSEDRRSSEERE 388
DRR + ER+
Sbjct: 628 -ERDRRDNRERD 638
Score = 41.6 bits (96), Expect = 0.001
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 17/148 (11%)
Query: 258 LRRSRS----HS-KNPKRSRSREHRRHRSRSMSR-ERKRRTRSKSREKRHRH-----RSR 306
LRRS S HS +P+R +S R R R + +R ++S R R R R
Sbjct: 367 LRRSASPYPSHSLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDR 426
Query: 307 SSSRSRSRSHQRSRHSSRDRSRERSKR----RSSKERFRDQDLASCDRD-RSSRDRSPRD 361
R +++ + SSRD +R R R RD+ RD R SR+
Sbjct: 427 EKDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYS 486
Query: 362 RDRKDKKRSYESANGR-SEDRRSSEERE 388
RD K+ + +S + R + D R E R+
Sbjct: 487 RDTKESRDPRDSRSTRDAHDYRDREGRD 514
Score = 38.1 bits (87), Expect = 0.014
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 9/174 (5%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRRE---EREREEREKLRRSRSHSKNPKRSRSREHRR 278
R K E+ K E + ++ LK + +++RE+ E L SR +++ E R
Sbjct: 888 RWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDRE 947
Query: 279 HRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSR--SRSHQRSRHSSRDRSRERSKRRSS 336
R+ +K+ K K+ + R + S S + +++S +
Sbjct: 948 TSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKSIEKKR 1007
Query: 337 KERFRDQDLASCDR-DRSSRDRSPRDRDRKDKKRSYESANGRS---EDRRSSEE 386
K+ D D++ + +S + R PR K+ E NG++ ED + E+
Sbjct: 1008 KKSKGDSDISDEEAAQQSKKKRGPRTPPITTKEELVEMCNGKNGILEDSQKKED 1061
Score = 36.2 bits (82), Expect = 0.052
Identities = 31/168 (18%), Positives = 70/168 (41%), Gaps = 6/168 (3%)
Query: 223 EKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH-RS 281
E+ E +R ++ +++ K+RE+ E E ++R + R R H +
Sbjct: 897 ERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDRETSDRAHDEN 956
Query: 282 RSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKER-F 340
+ ++ +K+ + K + R + S + + +S E+ +++S +
Sbjct: 957 KKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKSIEKKRKKSKGDSDI 1016
Query: 341 RDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
D++ A +S + R PR K+ E NG++ S+++E
Sbjct: 1017 SDEEAA----QQSKKKRGPRTPPITTKEELVEMCNGKNGILEDSQKKE 1060
Score = 35.4 bits (80), Expect = 0.089
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 263 SHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRH 321
+++ N + HR+ HR+R E T ++ ++ + RSSS +RS+ RS
Sbjct: 1144 TNTTNNTFANEDSHRKCHRTRVEKVETPHVTIEDAQHRKPMDQKRSSSLGSNRSN-RSHT 1202
Query: 322 SSRDR--SRERSKRRSSKERFRDQDLASCDRDR---SSRDRSPRDRDRKDKKRSYESANG 376
S R R S + + R + R + L S RDR S + + + R D+ + E +
Sbjct: 1203 SGRLRSPSNDSAHRSGDDQSGRKRVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRS 1262
Query: 377 RSEDRRSSEEREA 389
S DR+ S +
Sbjct: 1263 TSSDRQDSRSHSS 1275
Score = 32.3 bits (72), Expect = 0.76
Identities = 34/156 (21%), Positives = 63/156 (40%), Gaps = 15/156 (9%)
Query: 241 QERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKR 300
+ER+K + R+ + E +R+ S +P R S RHR + + K RT E
Sbjct: 86 RERMKNK--RQDVDTEPQKRNTEESSSPVRKES-SRGRHREKEDIKITKERTPESEEENV 142
Query: 301 HRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR---------SSKERFRDQDLASCDRD 351
+R S + ++ S + R++ +R +E + S +
Sbjct: 143 EWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVV 202
Query: 352 RSSRDRSP---RDRDRKDKKRSYESANGRSEDRRSS 384
RS SP + +K S +S++ +DR++S
Sbjct: 203 RSKLSPSPSLRKSSKSPKRKSSPKSSSASKKDRKTS 238
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 92.4 bits (228), Expect = 6e-19
Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 24/234 (10%)
Query: 150 EESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADH 209
E +K +E K R++ R E S SS + + H++ +D
Sbjct: 49 ERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEE-----------HNDKEHSSDK 97
Query: 210 FGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPK 269
G+ L E E + K + + ++ R + R R R K RSRS +
Sbjct: 98 --GRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKS 155
Query: 270 RSRSREHRRHRSRSMSRERKRRTRSKSREK-RHRHRSRSSSRSRSRSHQRSRHSSRDRSR 328
RSRSRE R +SRS SRERKRR RS+SR + RHRHR+RS SR+RSRS R + + R
Sbjct: 156 RSRSRE--RKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRF 213
Query: 329 ERS-KRRSSKERFRDQDLASCDR-------DRSSRDRSPRDRDRKDKKRSYESA 374
RS R S FR ++ A + +R+ + + R+++ +K++ E A
Sbjct: 214 SRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQEIA 267
Score = 85.1 bits (209), Expect = 1e-16
Identities = 63/172 (36%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRS 281
RE+L + E + KR + + R R R + RR RS S+ K+SRSR R +S
Sbjct: 99 RERLNSSEN--GEDRHKRKERKSSRGRSHSRS-RSRERRHRSRSRERKKSRSRSRERKKS 155
Query: 282 RSMSRERKR-RTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERF 340
RS R R+R ++RS+SRE++ R RSRS SRSR R RSR +R RSR+R KR RF
Sbjct: 156 RS--RSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRF 213
Query: 341 RDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
R S P R R + E+ R E + +E+ E+
Sbjct: 214 --------SRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEM 257
Score = 80.9 bits (198), Expect = 2e-15
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTR 293
+ +K E +E + RE+L S + KR + R+ R RS S SR R+RR R
Sbjct: 78 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKR-KERKSSRGRSHSRSRSRERRHR 136
Query: 294 SKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRS 353
S+SRE++ + RSRS R +SRS R R SR RSRER +R S+ R R + R RS
Sbjct: 137 SRSRERK-KSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR---HRTRS 192
Query: 354 SRDRSPRDRDRK---DKKRSYESANGRS 378
R RDRK +K R + + R+
Sbjct: 193 RSRTRSRSRDRKKRIEKPRRFSRSLSRT 220
Score = 79.0 bits (193), Expect = 7e-15
Identities = 64/196 (32%), Positives = 83/196 (42%), Gaps = 45/196 (22%)
Query: 237 EKRNQERLKRREERE-----REEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRE---- 287
EK + +R K++E+ E R + RSRS S+ KR E R+HRSRS S+E
Sbjct: 14 EKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRH 73
Query: 288 -------------------------RKRRTRSKSREKRHRH------RSRSSSRSRS--- 313
R+R S++ E RH+ R RS SRSRS
Sbjct: 74 ESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRER 133
Query: 314 --RSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSY 371
RS R R SR RSRER K RS + S +R R R RS + + RS
Sbjct: 134 RHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSR 193
Query: 372 ESANGRSEDRRSSEER 387
RS DR+ E+
Sbjct: 194 SRTRSRSRDRKKRIEK 209
Score = 78.6 bits (192), Expect = 9e-15
Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREERE----KLRRSRSHSKNPKR--SRSRE 275
R+K +E V + ++ R RER+ + + RSRS SK +R S+ +
Sbjct: 20 RDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKS 79
Query: 276 HRRHRS-------RSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSR-HSSRDRS 327
++H+S S + R+R S++ E RH+ + R SSR RS S RSR R RS
Sbjct: 80 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRS 139
Query: 328 RERSKRRS-SKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEE 386
RER K RS S+ER + R RS + R R R+ K+R + RS R +
Sbjct: 140 RERKKSRSRSRERKK-------SRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRS 192
Query: 387 R 387
R
Sbjct: 193 R 193
Score = 78.6 bits (192), Expect = 9e-15
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRS--------RSHSKNPKRSRS 273
R + E KR ++ + ++++ R + +E R E ++K + + HS + R R
Sbjct: 44 RSRSRERKRK-SDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERL 102
Query: 274 REHRRHRSRSMSRERKR-----RTRSKSREKRHRHRSRS--SSRSRSRSHQRSRHSSRDR 326
R +ERK +RS+SRE+RHR RSR SRSRSR ++SR SR+R
Sbjct: 103 NSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRER 162
Query: 327 SRERSKRRSSKERFRDQDLASCDRDRSSRDRS-PRDRDRKDKKR 369
+ RS+ R K R R + + +R RS R R R KKR
Sbjct: 163 KKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKR 206
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 90.9 bits (224), Expect = 2e-18
Identities = 51/172 (29%), Positives = 94/172 (54%), Gaps = 6/172 (3%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRRE-EREREEREKLRRSRSHSKNPKRSRSREHRRHR 280
RE+ +E KR +K++K+ ++R + +E ER+R+EREK R+ R + KR + ++ R +
Sbjct: 48 REREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERK 107
Query: 281 SRSMSRERKRRTRSKSRE---KRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSK 337
R RERK++ K RE K+ R R R R + R +R R R + + K+R +
Sbjct: 108 QRG-RRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKE 166
Query: 338 ERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREA 389
ER + ++ +R + R+R R +K++K+ R +DR++ + ++
Sbjct: 167 EREKKRERNRKER-KKERERKERRERKKERKKERRKKKERKKDRKTDRQTDS 217
Score = 88.2 bits (217), Expect = 1e-17
Identities = 53/171 (30%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREERER-EEREKLRRSRSHSKNPKRSRSREHRR 278
E RE+ + + E++ +R ++ K+R++RER +ERE+ R+ R K K R +E R+
Sbjct: 39 ERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKER--EKQRKERREKERRK 96
Query: 279 HRSRSMSRERKRRTRSKSREKRHR-HRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSK 337
+ RERK+R R + ++K+ R R R + + R R ++ R R + R+R K R +
Sbjct: 97 RKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKR 156
Query: 338 ERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
ER R + + R+R R ++R+ K+R E R ++RR +ER+
Sbjct: 157 ERKRKKRKKEEREKKRERNRKERKKERERKERR-ERKKERKKERRKKKERK 206
Score = 87.4 bits (215), Expect = 2e-17
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 12/170 (7%)
Query: 229 KRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRR---HRSRSMS 285
+R K+E+R +E+ KR E+ER+ RE+ ++ + K +R + RE +R + R
Sbjct: 31 QRESERKKERREREKRKREREKERK-RERGKKEKKKRKKRERGKERERKRKEREKQRKER 89
Query: 286 RERKRRTRSKSREKRHR-HRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSK---ERFR 341
RE++RR R K ++KR R R R + + +R R + + R R+R KRR K ER R
Sbjct: 90 REKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKR 149
Query: 342 DQDLASCDRDRSSRDRSPRD----RDRKDKKRSYESANGRSEDRRSSEER 387
+++ +R R R + R+ R+RK++K+ E R + +ER
Sbjct: 150 EKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKER 199
Score = 87.0 bits (214), Expect = 3e-17
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHR-----SRSMSRERK 289
+++K +ER KR+ ERE+E R++ R + K KR R +E R R R RE++
Sbjct: 35 ERKKERREREKRKREREKE-RKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKE 93
Query: 290 RRTRSKSREKRHR-HRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS---KERFRDQDL 345
RR R K ++KR R R R + + +R R + + R R+R KRR KER R+++
Sbjct: 94 RRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKER 153
Query: 346 ASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
+R R R + R++ R+ ++ + R E R +ER+
Sbjct: 154 GKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERK 196
Score = 81.6 bits (200), Expect = 1e-15
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 245 KRREEREREEREKLRRSRSHSKNPKRSRSREH---RRHRSRSMSRERKRRTRSKSREKRH 301
+R ER++E RE+ +R R K KR R ++ R+ R R RERKR+ R K R++R
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKER- 89
Query: 302 RHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRD 361
R R + + ++ R + RER K++ KER R+ ++ R R R R
Sbjct: 90 ----REKERRKRKKEKKKRERKQRGRRERKKKKERKERERE------NKQRRERKRKKRR 139
Query: 362 RDRKDKKRSYESANGRSEDRRSSEEREAGE 391
+ ++ K+R E G+ E +R ++E E
Sbjct: 140 KKKRRKERKREKERGKRERKRKKRKKEERE 169
Score = 80.1 bits (196), Expect = 3e-15
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 10/128 (7%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREEREREERE---KLRRSRSHSKNPKRSRSREH 276
E REK ++ +K+E++ + R +R++++ER+ERE K RR R K K+ R +E
Sbjct: 88 ERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKER 147
Query: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSK-RRS 335
+R + R RERKR+ R K ++ R R+R + R +R R R+R +ER K RR
Sbjct: 148 KREKERG-KRERKRKKRKKEEREKKRERNR-----KERKKERERKERRERKKERKKERRK 201
Query: 336 SKERFRDQ 343
KER +D+
Sbjct: 202 KKERKKDR 209
Score = 67.4 bits (163), Expect = 2e-11
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 47/249 (18%)
Query: 94 IADCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQ 153
+ C ++ +R +E ++E K ER E E GK K + G +E +
Sbjct: 19 MVSCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERG--KERE 76
Query: 154 KVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGK 213
+ E EK R ++RE E R ++Q+ R
Sbjct: 77 RKRKEREKQRKERREKERRKRKKEKKKRERKQRGR------------------------- 111
Query: 214 LHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRS 273
RE+ K++K +ER +R ++ RE + K RR + K KR +
Sbjct: 112 --------RER----------KKKKERKER-ERENKQRRERKRKKRRKKKRRKERKREKE 152
Query: 274 REHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER-SK 332
R R + + +E + + R ++R++R + R R R R + ++ R ++R ++R +
Sbjct: 153 RGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTD 212
Query: 333 RRSSKERFR 341
R++ + FR
Sbjct: 213 RQTDSQVFR 221
Score = 58.5 bits (140), Expect = 1e-08
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 261 SRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSR 320
S SH P R E ++ R R + ++ R + + RE+ + + + R R + +R R
Sbjct: 21 SCSHISKPCTQRESERKKER-REREKRKREREKERKRERGKKEKKKRKKRERGKERERKR 79
Query: 321 HSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSED 380
++R ++R +RR + R R ++ +R + R + ++RK+++R + R
Sbjct: 80 ---KEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRK 136
Query: 381 RRSSEER 387
+R ++R
Sbjct: 137 KRRKKKR 143
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 90.5 bits (223), Expect = 2e-18
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 30/303 (9%)
Query: 99 RRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDE 158
+ E KR+ E Q ISA + ++ + +E + G+ + + S++ +
Sbjct: 273 KELEEVMKRVREAQSFISAAIEPESGKSNE--RKGGRSRSHTRSKSRSSSKSHSRRKRSQ 330
Query: 159 VEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGF 218
+ + ++ + S +++ + E + H D+R
Sbjct: 331 SKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRK------------ 378
Query: 219 IEIREKLEELKRVVA---EKQEKRNQERLKRREEREREEREKLR---RSRSHSKNPKRSR 272
+ REK++E +RV EK+ +R +ER K +E + ++R+K R R + K+ +R R
Sbjct: 379 -DTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERER 437
Query: 273 SREHRRHRSRSMSRER---KRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHS-SRDRSR 328
+EH + R + +E+ K R + +S+E + + SR+ RS+ SR S S R R
Sbjct: 438 EKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 497
Query: 329 ERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYE--SANGRSEDRRSSEE 386
R + RSS R + + +SSR SPR R++KDKKR E + R E RS+
Sbjct: 498 RRRRSRSSS---RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSM 554
Query: 387 REA 389
R++
Sbjct: 555 RKS 557
Score = 75.9 bits (185), Expect = 6e-14
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRS 281
REK +E R E++ ++ E+ + +E+ + +++EK R + SK R ++ ++ R+
Sbjct: 425 REKDKEKDR---EREREKEHEKDRDKEKEKEQDKEK-EREKDRSKEIDEKRKKD-KKSRT 479
Query: 282 RSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRS-RERSKRRSSKERF 340
S RR+RS SRE+R R RSRSSSRS S R SSR S R R+K+ +E+
Sbjct: 480 PPRSYNASRRSRSSSRERR-RRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKE 538
Query: 341 RDQDLASCDRDRS-SRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
RD +R+RS S +S DRD K+K ++ E + + + E+
Sbjct: 539 RDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEV 591
Score = 55.1 bits (131), Expect = 1e-07
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKL---------RRSRSHSKNPKRSR 272
R+K +E ++ +K+++R ++R K +E+ +++++ RRSRS S+ +R R
Sbjct: 445 RDKEKEKEQ---DKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRR 501
Query: 273 SREH----------RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHS 322
SR +R SRS S R R + K REK H S R RS S ++S +
Sbjct: 502 SRSSSRSPRTSKTIKRKSSRSPS-PRSRNKKDKKREKERDHISERRERERSTSMRKSSND 560
Query: 323 SRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRR 382
+ + S KE+ +++ S S++ +D R ++ + + N + +
Sbjct: 561 RDGKEKLEKNSTSLKEKEHNKEPDS----SVSKEVDDKDAPRTEENKIQHNGNCQLNEEN 616
Query: 383 SSEEREA 389
S + EA
Sbjct: 617 LSTKTEA 623
Score = 50.8 bits (120), Expect = 2e-06
Identities = 32/135 (23%), Positives = 54/135 (40%)
Query: 257 KLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSH 316
K+ S + P + + M R R+ ++ + + +S RSRSH
Sbjct: 252 KINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSH 311
Query: 317 QRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANG 376
RS+ S +S R KR SK R R + + + R +SP + K ++R +
Sbjct: 312 TRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRS 371
Query: 377 RSEDRRSSEEREAGE 391
S D+R + E
Sbjct: 372 HSRDKRKDTREKIKE 386
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 90.5 bits (223), Expect = 2e-18
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 30/303 (9%)
Query: 99 RRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDE 158
+ E KR+ E Q ISA + ++ + +E + G+ + + S++ +
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESGKSNE--RKGGRSRSHTRSKSRSSSKSHSRRKRSQ 214
Query: 159 VEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGF 218
+ + ++ + S +++ + E + H D+R
Sbjct: 215 SKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRK------------ 262
Query: 219 IEIREKLEELKRVVA---EKQEKRNQERLKRREEREREEREKLR---RSRSHSKNPKRSR 272
+ REK++E +RV EK+ +R +ER K +E + ++R+K R R + K+ +R R
Sbjct: 263 -DTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRERER 321
Query: 273 SREHRRHRSRSMSRER---KRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHS-SRDRSR 328
+EH + R + +E+ K R + +S+E + + SR+ RS+ SR S S R R
Sbjct: 322 EKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
Query: 329 ERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYE--SANGRSEDRRSSEE 386
R + RSS R + + +SSR SPR R++KDKKR E + R E RS+
Sbjct: 382 RRRRSRSSS---RSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSM 438
Query: 387 REA 389
R++
Sbjct: 439 RKS 441
Score = 75.9 bits (185), Expect = 6e-14
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRS 281
REK +E R E++ ++ E+ + +E+ + +++EK R + SK R ++ ++ R+
Sbjct: 309 REKDKEKDR---EREREKEHEKDRDKEKEKEQDKEK-EREKDRSKEIDEKRKKD-KKSRT 363
Query: 282 RSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRS-RERSKRRSSKERF 340
S RR+RS SRE+R R RSRSSSRS S R SSR S R R+K+ +E+
Sbjct: 364 PPRSYNASRRSRSSSRERR-RRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKE 422
Query: 341 RDQDLASCDRDRS-SRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
RD +R+RS S +S DRD K+K ++ E + + + E+
Sbjct: 423 RDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEV 475
Score = 55.1 bits (131), Expect = 1e-07
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 27/187 (14%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKL---------RRSRSHSKNPKRSR 272
R+K +E ++ +K+++R ++R K +E+ +++++ RRSRS S+ +R R
Sbjct: 329 RDKEKEKEQ---DKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRR 385
Query: 273 SREH----------RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHS 322
SR +R SRS S R R + K REK H S R RS S ++S +
Sbjct: 386 SRSSSRSPRTSKTIKRKSSRSPS-PRSRNKKDKKREKERDHISERRERERSTSMRKSSND 444
Query: 323 SRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRR 382
+ + S KE+ +++ S S++ +D R ++ + + N + +
Sbjct: 445 RDGKEKLEKNSTSLKEKEHNKEPDS----SVSKEVDDKDAPRTEENKIQHNGNCQLNEEN 500
Query: 383 SSEEREA 389
S + EA
Sbjct: 501 LSTKTEA 507
Score = 50.8 bits (120), Expect = 2e-06
Identities = 32/135 (23%), Positives = 54/135 (40%)
Query: 257 KLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSH 316
K+ S + P + + M R R+ ++ + + +S RSRSH
Sbjct: 136 KINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSH 195
Query: 317 QRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANG 376
RS+ S +S R KR SK R R + + + R +SP + K ++R +
Sbjct: 196 TRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRS 255
Query: 377 RSEDRRSSEEREAGE 391
S D+R + E
Sbjct: 256 HSRDKRKDTREKIKE 270
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 89.4 bits (220), Expect = 5e-18
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREEREREERE-----KLRRSRSHSKNPKRSRSR 274
EIRE+ E++ K+E R ER K R ERE+ +RE K R + K ++ R
Sbjct: 37 EIREREREIETRKEGKKE-RESERKKERREREKRKREREKERKRERGKKEKKGERKKEER 95
Query: 275 EHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSR---ERS 331
E ++ R ++E + + + K +EK+ R R+ + R R +R R ++R R ER
Sbjct: 96 ERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEERE 155
Query: 332 KRRSSKERFR-------DQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
K R KER + +++ +++R R + R+R + K+R + R ++R+
Sbjct: 156 KERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKK 215
Query: 385 EERE 388
EER+
Sbjct: 216 EERK 219
Score = 79.3 bits (194), Expect = 5e-15
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 199 LHDNDRRLADHFGGKLHLGFIEIREKLEELKRV-VAEKQEKRNQERLKRREEREREEREK 257
+ + +R + GK +E+ E KR EK+ KR + + +++ ER++EERE+
Sbjct: 38 IREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERER 97
Query: 258 LRRSRS-----------HSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSR 306
+R R K K+ R R + + R ERKR R K RE++ R +
Sbjct: 98 KKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREER-KERERKKEEREK 156
Query: 307 SSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDR---- 362
R + +R + ++ R+ +R+ K+R R++ +R+R R ++R
Sbjct: 157 ERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKE 216
Query: 363 DRKDKKRSYESANGRSEDRRSSEERE 388
+RK +++ N R ++R E +E
Sbjct: 217 ERKKERQKDRQTNWREKERGKRERKE 242
Score = 75.5 bits (184), Expect = 8e-14
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRS--RSHSKNPKRSRSREHRRH 279
RE+ ++ K+ +K+E+ ++R + +E +E EE+EK ++ + + K + RE +
Sbjct: 79 RERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEE 138
Query: 280 RSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKR-RSSKE 338
R R ERK R R K ++ R R R R + ++ +ER KR R+ KE
Sbjct: 139 RKRE---ERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKE 195
Query: 339 RFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSS-EEREAGE 391
R + R+R R +K++K+ E R +DR+++ E+E G+
Sbjct: 196 R------------KKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGK 237
Score = 67.8 bits (164), Expect = 2e-11
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRR-------EEREREEREKLRRSRSHSKNPKRSR 272
E +++ E + E++EKR ++ K R +ERER+E E+ R R + K R
Sbjct: 96 ERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKE-ERKREERKERERKKEER 154
Query: 273 SREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSK 332
+E R + R++ + +EK + R + + R +R R R+R +ER K
Sbjct: 155 EKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKK 214
Query: 333 RRS-SKERFRDQDLASCDRDRSSRDRSPRDR 362
+ KER +D+ +++R R+R R +
Sbjct: 215 KEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 48.9 bits (115), Expect = 8e-06
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 20/125 (16%)
Query: 280 RSRSMSRERKRRTRSKS------------REKRHRHRSRSSSRSRSRSHQRSRHSSRDRS 327
+S RER+ TR + RE+ R R R R R R + + +
Sbjct: 35 QSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEE 94
Query: 328 RERSKRRSSKERFRDQDLASC----DRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRS 383
RER KRR KE ++ ++R + ++R+RK++++ E R E R
Sbjct: 95 RERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREE----RKERERK 150
Query: 384 SEERE 388
EERE
Sbjct: 151 KEERE 155
Score = 48.5 bits (114), Expect = 1e-05
Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 105 KKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARA 164
+KR E ++E E K ++ EE + + E+ EG +E +K ++ E+ R
Sbjct: 67 EKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRT 126
Query: 165 KKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREK 224
K E +E R ++++ R E + +R G K E+
Sbjct: 127 SK-EGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEK--------EEE 177
Query: 225 LEELKRVVAEKQEKRNQERLKRREERER--EEREKLRRSRSHSKNPKRSRSREHRRHRSR 282
+E +R +K+E+ +ER K RE +ER ++E+ ++ + K ++ + R +
Sbjct: 178 RKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGK 237
Query: 283 SMSRERKR 290
+ERK+
Sbjct: 238 RERKERKK 245
Score = 43.9 bits (102), Expect = 3e-04
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 282 RSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
+S RER+R ++ K+ R R + R +R R ++R RER K+ ER +
Sbjct: 35 QSEIREREREIETRKEGKKERESERK--KERREREKRKREREKERKRERGKKEKKGERKK 92
Query: 342 DQDLASCDRDRSSRDRSPRDRDRKDK------KRSYESANGRSEDRRSSEEREAGE 391
++ R+R R R++++K KR + R + +ERE E
Sbjct: 93 EE-----------RERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKE 137
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 89.4 bits (220), Expect = 5e-18
Identities = 64/165 (38%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRR--HRSRSMSRE--RK 289
+K K E + R ER R RRS S ++P+RSRSR H R H S S RE R+
Sbjct: 241 KKDGKEGAEEIDRHVERRRSRSP--RRSLSPRRSPRRSRSRSHHREGHGSSSFDRELERE 298
Query: 290 RRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCD 349
+ + RE + R + R SRS R +R R SR+R R RS+ R K RD+ D
Sbjct: 299 KERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDR-----D 353
Query: 350 RDRSSRDRSPRDRDRK-DKKRSYESANGRSEDR-RSSEEREAGEI 392
R+R + R RDR DK+R E R R RS E+R GE+
Sbjct: 354 REREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEV 398
Score = 83.6 bits (205), Expect = 3e-16
Identities = 61/179 (34%), Positives = 97/179 (54%), Gaps = 24/179 (13%)
Query: 222 REKLEELKRVVAEKQEKRNQ-ERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHR 280
REK E R +++Q R + E K +E+++ +R K RSRSRE R+HR
Sbjct: 378 REKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRE-RKHR 436
Query: 281 SRSMSRERKRRTRSKSREKRHRH----------RSRSSSRSRSRSHQRSRHSSRDRSRER 330
SRS SR +R+RS+S+EK +H RSRS S+ R+ S ++S+ S+E+
Sbjct: 437 SRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEK 496
Query: 331 SKRRS-SKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
S++RS SKER +D S+D+S D+ D++RS +S S++++ + E
Sbjct: 497 SRKRSRSKERSHKRD------HSDSKDQS----DKHDRRRS-QSIEQESQEKQHKNKDE 544
Score = 83.2 bits (204), Expect = 4e-16
Identities = 64/193 (33%), Positives = 87/193 (45%), Gaps = 45/193 (23%)
Query: 241 QERLKRREEREREEREK-LRRSRSHSKNPKRSRSREHRRHRSRSMSRERK--RRTRSKSR 297
+E+ ++R ERE +EREK RRSRS + +R RSR RHRSRS SR+RK RR R + R
Sbjct: 297 REKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDRER 356
Query: 298 EK-------------------RHRHRSRSSSRS---------------------RSRSHQ 317
EK R + R RS RS R R +
Sbjct: 357 EKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDK 416
Query: 318 RSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDK--KRSYESAN 375
R + SR RS+ R + R R ++ R RS S + K+K KRS +
Sbjct: 417 RDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQ 476
Query: 376 GRSEDRRSSEERE 388
GR++ S++RE
Sbjct: 477 GRTDSVEKSKKRE 489
Score = 79.3 bits (194), Expect = 5e-15
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 23/173 (13%)
Query: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRS 294
+ R+++R R +R+RE ++ R R ++ + R E + R RS R +++R+R
Sbjct: 337 RSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRG 396
Query: 295 KSREKRH-------RHRS----------RSSSRSRSRSHQRSRHSSRD---RSRERSKRR 334
+ EK+H RHR S SRSR R H RSR SR+ RSR RSK +
Sbjct: 397 EVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKH-RSRSRSRNAGKRSRSRSKEK 455
Query: 335 SSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEER 387
SSK + ++ ++ S+ R+ D K KKR + + +S R S+ER
Sbjct: 456 SSKHKNESKEKSNKRSRSGSQGRT--DSVEKSKKREHSPSKEKSRKRSRSKER 506
Score = 79.3 bits (194), Expect = 5e-15
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 222 REKLEEL-KRVVAEKQEKRNQERLKRRE---EREREEREKLRRSRSHSKNPKRSRSREHR 277
REK E +R + ++R ER K RE ER +E+ RSR + K ++ R
Sbjct: 356 REKENERGRRRDRDYDKERGNEREKERERSRERSKEQ-----RSRGEVEEKKHKEDKDDR 410
Query: 278 RHR-SRSMSRERKRRTRSKSREKRHRHRSRS---SSRSRSRSHQR-SRHSSRDRSRERSK 332
RHR + S++ K+ +RS+SRE++HR RSRS RSRSRS ++ S+H + + + +
Sbjct: 411 RHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKR 470
Query: 333 RRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
RS + D S R+ S R R R K+RS++ + S+D+ +R +
Sbjct: 471 SRSGSQGRTDSVEKSKKREHSPSKEKSRKRSR-SKERSHKRDHSDSKDQSDKHDRRRSQ 528
Score = 78.6 bits (192), Expect = 9e-15
Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 33/192 (17%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREERERE-EREKLRRSRSHSKNPKRSRSREHRRHR 280
RE+ +E +R ++ + +R +ERER ER K +RSR + K ++ RRHR
Sbjct: 354 REREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHR 413
Query: 281 ------------SRSMSRERKRRTRSKSREKRHRHRSRSSSR-------SRSRSHQRSRH 321
SRS SRERK R+RS+SR R RSRS + S+ +S++RSR
Sbjct: 414 DDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRS 473
Query: 322 SSRDR--SRERSKRRS---SKERFRDQDLASCDRDRSSRDRSPRDR-DRKDKKRSYESAN 375
S+ R S E+SK+R SKE+ R R RS RD D KD+ ++
Sbjct: 474 GSQGRTDSVEKSKKREHSPSKEKSR-------KRSRSKERSHKRDHSDSKDQSDKHDRRR 526
Query: 376 GRSEDRRSSEER 387
+S ++ S E++
Sbjct: 527 SQSIEQESQEKQ 538
Score = 74.3 bits (181), Expect = 2e-13
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 219 IEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREK-LRRSRSHSKNPKRSRSREHR 277
+E R + + + +R++ R RE ++ L R + + + ++ RE
Sbjct: 255 VERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKE 314
Query: 278 RHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRS-------------------RSRSHQR 318
R RSRS+ R +RR RS+SRE RHR RSRS R R R + +
Sbjct: 315 RRRSRSIDRGLERR-RSRSRE-RHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDK 372
Query: 319 SRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRS 378
R + R++ RERS+ RS ++R R ++ DR RD D++D K+ + + RS
Sbjct: 373 ERGNEREKERERSRERSKEQRSRG-EVEEKKHKEDKDDRRHRD-DKRDSKKEKKHSRSRS 430
Query: 379 EDRR---SSEEREAGE 391
+R+ S R AG+
Sbjct: 431 RERKHRSRSRSRNAGK 446
Score = 40.4 bits (93), Expect = 0.003
Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 23/215 (10%)
Query: 96 DCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKV 155
D DR E +R + E + E+ E + E K + + G VEE +
Sbjct: 351 DRDREREKENERGRRRDRDYDKERGNEREKERERSRERSK------EQRSRGEVEEKKHK 404
Query: 156 MDEVEKA-RAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKL 214
D+ ++ R KR++++ ++S S ++ + R + + + + H
Sbjct: 405 EDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKN--- 461
Query: 215 HLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRS--RSHSKNPKRSR 272
E +EK + R ++ + ++ KR +E+ K RS RSH ++ S+
Sbjct: 462 -----ESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSK 516
Query: 273 SREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRS 307
+ + R RS S E+ +S+EK+H+++ +
Sbjct: 517 DQSDKHDRRRSQSIEQ------ESQEKQHKNKDET 545
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 86.7 bits (213), Expect = 3e-17
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLR---RSRSHSKNPKRSRSREHRR 278
RE+ + +R ++E R+++R + RE + +REK R + R + +R RE R
Sbjct: 19 RERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERETERETER 78
Query: 279 HRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSS------RDRSRERSK 332
R R RERKR+T + + R R R R + R+R R+ + R RDR RER +
Sbjct: 79 QRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR 138
Query: 333 RRSSKERFRDQDLASCDRDRSS-RDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
+R + + + + DR+R +R R ++RK +++ + E RR ++R+ GE
Sbjct: 139 QRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDKKRKWGE 198
Score = 78.2 bits (191), Expect = 1e-14
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTR 293
E+Q +R +E + +E +R++ R +++ +N R R R R R +ER+R+
Sbjct: 2 ERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKE 61
Query: 294 SKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSK---ERFRDQDLASCDR 350
+ +R R R + R R R QR R DR R++ + R K +R R+++ R
Sbjct: 62 RDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKG-GR 120
Query: 351 DRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
+R + RDR+R +++R E R +R+ +RE
Sbjct: 121 ERDKQTERERDRER-ERQRQRERERQRQRERKRETDRE 157
Score = 76.3 bits (186), Expect = 5e-14
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 244 LKRREERERE-EREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHR 302
++R+ ER+RE +R K + + +++ RHR R RER R+T + +R +
Sbjct: 1 MERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQK 60
Query: 303 HRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQD---LASCDRDRSSRDRSP 359
R R R R + R R R RER KR++ +ER +D+D DR+R +
Sbjct: 61 ERDRQRQRERETERETERQRERQRQRER-KRQTDRERDKDRDRERKRETDRNRERNRKGG 119
Query: 360 RDRDRK-DKKRSYESANGRSEDRRSSEERE 388
R+RD++ +++R E R +R +RE
Sbjct: 120 RERDKQTERERDRERERQRQRERERQRQRE 149
Score = 31.6 bits (70), Expect = 1.3
Identities = 39/202 (19%), Positives = 79/202 (39%), Gaps = 24/202 (11%)
Query: 96 DCDRRTEVAKKRLAETQEEISAEVAAKA-ERVHELNEEIGKLLAKVEQLGAEGNVEESQK 154
D + TE + R E + + E + +R E + + + + Q + + ++
Sbjct: 12 DRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQRERE 71
Query: 155 VMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDR-RLADHFGGK 213
E E+ R ++R+ E + + ++ + + DR R + GG+
Sbjct: 72 TERETERQRERQRQRERKRQTDRERDKDRDRERK-----------RETDRNRERNRKGGR 120
Query: 214 LHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREERERE----------EREKLRRSRS 263
E RE+ E +R ++E++ Q KR +RER+ ER+K R+
Sbjct: 121 ERDKQTE-RERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKER 179
Query: 264 HSKNPKRSRSREHRRHRSRSMS 285
K + R + +R +S
Sbjct: 180 KEKKKEEKRREDKKRKWGEGIS 201
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 85.1 bits (209), Expect = 1e-16
Identities = 60/186 (32%), Positives = 85/186 (45%), Gaps = 32/186 (17%)
Query: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHR----------------- 277
K R+Q R + ++E+ R ++ RSRSHS RS+S++
Sbjct: 231 KSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRS 290
Query: 278 --RHRSRSMSRER--KRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSK- 332
RH+S+S SR R +RR + R R RS+ S +SRS RS+ SR RSR RSK
Sbjct: 291 PSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKS 350
Query: 333 ----------RRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRR 382
R S+ R R + + R R S+ S +K KK + + RS R
Sbjct: 351 KDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRS 410
Query: 383 SSEERE 388
S+ERE
Sbjct: 411 VSKERE 416
Score = 83.6 bits (205), Expect = 3e-16
Identities = 69/191 (36%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 207 ADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSK 266
AD G+ + G IE ++KR + EK + + R+ R E++ RR RS+S
Sbjct: 133 ADAHKGRKNEGVIEF-VSYSDMKRAL----EKLDGTEVNGRKIRLVEDKPGSRRRRSYS- 186
Query: 267 NPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRH-RHRSRSSSRSRSRSHQRSRHSSRD 325
RSR H R RSRS RK R+RS S + H + RSRS S SRSRS RSR SR
Sbjct: 187 -----RSRSHSRSRSRS-RHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRS 240
Query: 326 RSRERSKRRSSKERFRDQDLASCDRDRSSRDRSP-----RDRDRKDKKRSYESANGRSED 380
RS++ R SKE+ R + ++ S+D++ D K K RS +S+
Sbjct: 241 RSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKS 300
Query: 381 RRSSEEREAGE 391
R S+ER E
Sbjct: 301 RSRSQERRVEE 311
Score = 80.1 bits (196), Expect = 3e-15
Identities = 63/188 (33%), Positives = 87/188 (46%), Gaps = 42/188 (22%)
Query: 239 RNQERLKRREEREREEREKLRRSRS-HSKNPKR----SRSREHRRHRSRSMSRERKRRTR 293
R+ R + R R+ R + S+S HSK+ R SRSR R RS+S SR +K ++R
Sbjct: 189 RSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSR 248
Query: 294 SKSREKRHRHRSRSSSRSRSRSHQ---------------RSRHSSRDRSRERSKRRSSKE 338
S S+EK R RS S+ +SRS+S +SR SR +S+ +S+ RS +
Sbjct: 249 SPSKEK-SRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQER 307
Query: 339 RFRDQDLASCDRDRS---------------------SRDRSPRDRDRKDKKRSYESANGR 377
R ++ S R RS SR RS RK +KRS E + R
Sbjct: 308 RVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSR 367
Query: 378 SEDRRSSE 385
S R SE
Sbjct: 368 SRSRSKSE 375
Score = 75.1 bits (183), Expect = 1e-13
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 235 KQEKRNQERLKRREER-EREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTR 293
+ + +++ R + +E R E E+R + R RS K+ ++SRSR + SRS SR R +
Sbjct: 293 RHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKD 352
Query: 294 SKSREKRHRHRSRSSSRSRSRSHQ-RSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDR 352
+ KR R SRS SRSRS+S + R R S RD SK++ ++ R Q +
Sbjct: 353 KRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVS 412
Query: 353 SSRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
R+ + + +++ + E+A E R S
Sbjct: 413 KEREHAKSESSQREGRGESENAGTNQETRSRS 444
Score = 68.9 bits (167), Expect = 7e-12
Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 20/266 (7%)
Query: 138 AKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYL 197
+K G+ S+ ++R+KK ++ + + S K R A
Sbjct: 216 SKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEE 275
Query: 198 GLHDNDR-RLADHFGGKLHLGFIEIREKLEELKRVVAEKQEK----RNQER-LKRREERE 251
+ +ND H + R + +E +RV EK+ R+QE+ L++ R
Sbjct: 276 KIQNNDNVGKPKSRSPSRHKSKSKSRSRSQE-RRVEEEKRGSVSRGRSQEKSLRQSRSRS 334
Query: 252 REEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSK------------SREK 299
R + RSRS SK+ + + R+ R SRS SR R + RS+ S++K
Sbjct: 335 RSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKK 394
Query: 300 RHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRS-SRDRS 358
+ RS SRS SRS + R ++ S +R R S+ +Q+ S R S S+
Sbjct: 395 KKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNL 454
Query: 359 PRDRDRKDKKRSYESANGRSEDRRSS 384
P + + K S + +S R +S
Sbjct: 455 PSESRSRSKSASKTRSRSKSRSRSAS 480
Score = 65.9 bits (159), Expect = 6e-11
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 26/258 (10%)
Query: 100 RTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEV 159
R++ K R ++ S +A R + ++ + + + +G + S+
Sbjct: 241 RSKKEKSRSPSKEKSRSRSHSAGKSR-SKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSK 299
Query: 160 EKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFI 219
++R+++R EE R S+ Q++ LR S G + R K G
Sbjct: 300 SRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDK-RKGRK 358
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRS--RSHSKNPKRSRSREHR 277
RE E R + + +R+++R +R+ + ++K + RS S++P RS S+E
Sbjct: 359 RSRE--ESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKERE 416
Query: 278 RHRSRSMSRERK---------RRTRSKSR-----------EKRHRHRSRSSSRSRSRSHQ 317
+S S RE + + TRS+SR E R R +S S +RSRS+S
Sbjct: 417 HAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRS 476
Query: 318 RSRHSSRDRSRERSKRRS 335
RS S RSR RS RS
Sbjct: 477 RSASRSPSRSRSRSHSRS 494
Score = 63.5 bits (153), Expect = 3e-10
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 31/255 (12%)
Query: 150 EESQKVMDEVEKARAK-KREAEEVYRNS---------MPASSFQQQKLRVCEVCSAYLGL 199
E+S+ K+R+K K +AEE +N+ P+ + K R
Sbjct: 253 EKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRS---------- 302
Query: 200 HDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLR 259
+RR+ + G + G R + + L++ + + K R + +++R+ +
Sbjct: 303 RSQERRVEEEKRGSVSRG----RSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRK 358
Query: 260 RSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSR--SRSRSHQ 317
RSR S++ RSRS+ R + S + ++ K +E R +SRS SR S+ R H
Sbjct: 359 RSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHA 418
Query: 318 RSRHSSRDRSRE-----RSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYE 372
+S S R+ E ++ S+ R + + + SR +S + K RS
Sbjct: 419 KSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRS 478
Query: 373 SANGRSEDRRSSEER 387
++ S R S R
Sbjct: 479 ASRSPSRSRSRSHSR 493
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 85.1 bits (209), Expect = 1e-16
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRRE---EREREEREKLRRSRSHSKNPKRSRSREHRR 278
R++ + +R EK+ RN++R K+ E +RERE+++ R R + +R R RE R
Sbjct: 94 RDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKER 153
Query: 279 HRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSK---RRS 335
R R+ +R T ++ R R + + R R QR R+R +R + R++
Sbjct: 154 ERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKT 213
Query: 336 SKERFRDQDLASCDRDRSSRDRSPRDRDR-KDKKRSYESANGRSEDRRSSEEREAGE 391
ER R+ D +R+ R RDRDR K++ R + R ++R+ ++E E
Sbjct: 214 QTERQRETDREG-ERETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKE 269
Score = 81.6 bits (200), Expect = 1e-15
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH 279
EI E K+ E++ R +ER +R +RE+E + + R + + R R+ R
Sbjct: 120 EIERDREREKQKGRERERDRGRER-ERDRDREKERERQTEKDRDGQRETETERERDRERE 178
Query: 280 RSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKER 339
+ + ER R + + ++R R R R R +R R + R+ RE +RR ER
Sbjct: 179 KQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRR---ER 235
Query: 340 FRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
RD+D +RDR + R ++RK +++ + E RR ++R+ GE
Sbjct: 236 QRDRDRGK-ERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRKWGE 286
Score = 75.5 bits (184), Expect = 8e-14
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKR--- 290
++Q +R++ R K +ER+R+ R++ R R K R+R RE + R RE+++
Sbjct: 76 DRQRERDRVREKTEKERDRD-RKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRE 134
Query: 291 RTRSKSREK---RHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQD-LA 346
R R + RE+ R R + R + R QR + R+R RER K++ +E RD+D
Sbjct: 135 RERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQK-ERETERDRDRQR 193
Query: 347 SCDRDRSSRDRSPRDRDRK---DKKRSYESANGRSEDRRSSEERE 388
+++R + RDR RK +++R + R DRR +R+
Sbjct: 194 DTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRRERQRD 238
Score = 69.7 bits (169), Expect = 4e-12
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 248 EEREREEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRERKRRTRSKSREKRHRHRSR 306
++R+RE R+++R ++ R R RE RR + + +R+R+++T + +R + + R
Sbjct: 75 DDRQRE-RDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDREREKQKGR 133
Query: 307 SSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRK- 365
R R R +R R ++R R+ K R + + +R++ + RDRDR+
Sbjct: 134 ERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQR 193
Query: 366 --DKKRSYESANGRSEDRRSSEERE 388
+K+R ++ R R++ ER+
Sbjct: 194 DTEKERERQTDRERDRQRKTQTERQ 218
Score = 60.8 bits (146), Expect = 2e-09
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 250 REREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSS 309
R R ++ RS + K + + +R R R + K R R + R++ R + + ++
Sbjct: 51 RGRLGSQESPRSWGLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETN 110
Query: 310 RSRSRSHQ----RSRHSSRDRSRERSKRRSSKERFRDQD-------LASCDRDRSSRDRS 358
R+R R Q R R + + RER + R +ER RD+D DRD +
Sbjct: 111 RNRDREKQTEIERDREREKQKGRERERDR-GRERERDRDREKERERQTEKDRDGQRETET 169
Query: 359 PRDRDR-KDKKRSYESANGRSEDRRSSEERE 388
R+RDR ++K++ E+ R R + +ERE
Sbjct: 170 ERERDREREKQKERETERDRDRQRDTEKERE 200
Score = 28.9 bits (63), Expect = 8.4
Identities = 37/190 (19%), Positives = 69/190 (36%), Gaps = 26/190 (13%)
Query: 98 DRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMD 157
DR E K R E E E+ E E + + + E + E ++
Sbjct: 124 DREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKER 183
Query: 158 EVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLG 217
E E+ R ++R+ E+ +Q+K + +R D G +
Sbjct: 184 ETERDRDRQRDTEKERERQTDRERDRQRKTQT------------ERQRETDREGER---- 227
Query: 218 FIEIREKLEELKRVVAEKQEKRNQERLKRREERE--REEREKLRRSRSHSKNPKRSRSRE 275
E +R ++ R +ER + R+ +E ++ER+K R+ K + R +
Sbjct: 228 --------ETDRRRERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRRED 279
Query: 276 HRRHRSRSMS 285
+R +S
Sbjct: 280 KKRKWGEGIS 289
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 85.1 bits (209), Expect = 1e-16
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 231 VVAEKQEKRNQERLKRR-EEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERK 289
++ E++ +R +ER ++R +ER RE+ ++ + R + R R R R R R +R
Sbjct: 56 IIRERERQRERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRD 115
Query: 290 RRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRS------RERSKRRSSKERFRDQ 343
R T ++ +E+R R R R + R R QR +DR R+R + ER+RD+
Sbjct: 116 RETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDR 175
Query: 344 DL-------ASCDRDRS-SRDRSPRDRDR-----KDKKRSYESANGRSEDRRSSEERE 388
+ DRDR R++ R+RDR ++K R E GR D+ ER+
Sbjct: 176 ERERQKQRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDRERQ 233
Score = 77.8 bits (190), Expect = 2e-14
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 13/168 (7%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRRE---------EREREEREKLRRSRSHSKNPKRSR 272
REK E+++ ++Q KR++ER + R+ +R+RE + + R ++ KR +
Sbjct: 78 REKDREIEKD-RDRQRKRDRERQRWRDRDRKRERWGDRDRETETERQEERERQRDRKREK 136
Query: 273 SREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSK 332
RE +R R + ++R+ T K R++ R R R Q+ R + RDR RER +
Sbjct: 137 DRERQRQREIGIDKDREIETE-KDRDREREMGETERYRDRERERQKQRETRRDRDRERQR 195
Query: 333 RRSSKERFRDQDLASCDRDRSSRDRSPRDRDR-KDKKRSYESANGRSE 379
+ +ER RD+ ++DR + RDRD+ +D++R E R +
Sbjct: 196 EKEDRERDRDRQ-KEREKDRYRERETGRDRDKERDRERQREKDRDRQK 242
Score = 67.8 bits (164), Expect = 2e-11
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 12/124 (9%)
Query: 234 EKQEKRNQERLKRRE-EREREEREKLRRSRSHSKNPKRSRSREHR-----RHRSRSMSRE 287
E+QE+R ++R ++RE +RER+ + ++ + ++ R RE R+R R R+
Sbjct: 121 ERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERERQ 180
Query: 288 RKRRTR-----SKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRD 342
++R TR + REK R R R + R + R R + RDR +ER + R +E+ RD
Sbjct: 181 KQRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDRER-QREKDRD 239
Query: 343 QDLA 346
+ A
Sbjct: 240 RQKA 243
Score = 62.4 bits (150), Expect = 7e-10
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 223 EKLEELKRVVAEKQEKRNQERLKRRE-----------ERERE-EREKLRRSRSHSKNPKR 270
E+ EE +R K+EK ++ER ++RE E++R+ ERE R + +R
Sbjct: 121 ERQEERERQRDRKREK-DRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERER 179
Query: 271 SRSREHRRHRSRSMSRERKRRTRSKSREK---RHRHRSRSSSRSRSRSHQRSRHSSRDRS 327
+ RE RR R R RE++ R R + R+K + R+R R + R R + R R +DR
Sbjct: 180 QKQRETRRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKERDRERQREKDRD 239
Query: 328 RERS 331
R+++
Sbjct: 240 RQKA 243
Score = 60.5 bits (145), Expect = 3e-09
Identities = 56/175 (32%), Positives = 72/175 (41%), Gaps = 31/175 (17%)
Query: 243 RLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSRE---- 298
RL R + E + LR SR P R RE +R R R R K R R K RE
Sbjct: 32 RLAMRSQIEDRDVLILRGSRVA---PAIIRERERQRERERQRKR-AKERHREKDREIEKD 87
Query: 299 -KRHRHRSRSSSRSRSRSHQRSRHSSRDR--------SRERS---KRRSSKERFRDQDLA 346
R R R R R R R +R R RDR RER KR +ER R +++
Sbjct: 88 RDRQRKRDRERQRWRDRDRKRERWGDRDRETETERQEERERQRDRKREKDRERQRQREI- 146
Query: 347 SCDRDRSSRDRSPRDRDR----------KDKKRSYESANGRSEDRRSSEEREAGE 391
D+DR RDR+R ++++R + R DR E+E E
Sbjct: 147 GIDKDREIETEKDRDREREMGETERYRDRERERQKQRETRRDRDRERQREKEDRE 201
Score = 44.7 bits (104), Expect = 1e-04
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 28/204 (13%)
Query: 99 RRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLL---AKVEQLGAEGNVEESQKV 155
R E +KR E E E+ +R + + E + K E+ G E+++
Sbjct: 64 RERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRETETER- 122
Query: 156 MDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLH 215
+E E+ R +KRE + + + +++ + D DR +
Sbjct: 123 QEERERQRDRKREKDRERQRQREIGIDKDREIETEK---------DRDR--------ERE 165
Query: 216 LGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSRE 275
+G E E ++ E + R++ER + +E+RER+ R R + R R RE
Sbjct: 166 MGETERYRDRERERQKQRETRRDRDRERQREKEDRERD------RDRQKEREKDRYRERE 219
Query: 276 HRRHRSRSMSRERKRRTRSKSREK 299
R R + RER+R + + R+K
Sbjct: 220 TGRDRDKERDRERQRE-KDRDRQK 242
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 85.1 bits (209), Expect = 1e-16
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 242 ERLKRREERERE---EREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRT-----R 293
E + R+ ER RE ER++ + S++ ++ +R R R+ R+R R RER+++T R
Sbjct: 15 ETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGER 74
Query: 294 SKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLAS---CDR 350
+ RE R R R R + R R + + RH+ DR R++ K R ER RD++ R
Sbjct: 75 QRERE-RDRDRQRETERERDKERETDRHTETDRERQKQKEREM-ERVRDREREKQKEMGR 132
Query: 351 DRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
+R + + R+R+R+ ++ ++EDR ERE
Sbjct: 133 ERQTDRETDRERERQAERERETGRERKTEDRHRERERE 170
Score = 75.5 bits (184), Expect = 8e-14
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRRE-ERERE-EREKLR-----RSRSHSKNPKRSRSR 274
RE+ ++ R E+Q +R ++R ++RE ERER+ ERE R R R K + R R
Sbjct: 62 REREKQTDRE-GERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVR 120
Query: 275 EHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR 334
+ R + + M RER+ + +R R R + R R ++ R R R+R RER ++R
Sbjct: 121 DREREKQKEMGRERQTDRETDRERERQAERERETGRER-KTEDRHRERERERKRERERKR 179
Query: 335 SSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKK 368
+KER R D+ +R+R RDR R+ ++
Sbjct: 180 ETKERERHTDM---ERERQRETDRKRDRQRESER 210
Score = 75.1 bits (183), Expect = 1e-13
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLR-RSRSHSKNPKRSRSREHRRHR 280
RE E R K E R+ ER ++R+ ER++ R R + + +R R RE R R
Sbjct: 25 RETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDR 84
Query: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRER-SKRRSSKER 339
R RER + + + R R + R R R R ++ RER + R + +ER
Sbjct: 85 QRETERERDKERETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRER 144
Query: 340 FRDQDL-ASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
R + R+R + DR R+R+R+ K+ + +R + ERE
Sbjct: 145 ERQAERERETGRERKTEDRH-RERERERKRERERKRETKERERHTDMERE 193
Score = 73.2 bits (178), Expect = 4e-13
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKR--SRSREHRRHRSRSMSRERKRR 291
EKQ R ER +R ER+R+ + + R R + R RE ++ + R M R R R
Sbjct: 65 EKQTDREGER-QRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDRE 123
Query: 292 TRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRD 351
+ R R R + R R R +R R + R+R E R +ER R+++
Sbjct: 124 REKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERE------- 176
Query: 352 RSSRDRSPRDRDR-KDKKRSYESANGRSEDRRSSEERE 388
R R ++R+R D +R + R DR+ ERE
Sbjct: 177 ---RKRETKERERHTDMERERQRETDRKRDRQRESERE 211
Score = 62.8 bits (151), Expect = 5e-10
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRS 281
R++ E +R + ++ + +R++++ERE R R K R R + R
Sbjct: 84 RQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRE 143
Query: 282 RSMSRERKRRT-RSKSREKRHRHRSRSSSRSRSR---SHQRSRHSSRDRSRERS---KRR 334
R ER+R T R + E RHR R R R R R + +R RH+ +R R+R KR
Sbjct: 144 RERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQRETDRKRD 203
Query: 335 SSKERFRDQD 344
+E R++D
Sbjct: 204 RQRESERERD 213
Score = 57.0 bits (136), Expect = 3e-08
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 276 HRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRS 335
H + +M R+R+RR R RE+ S++ R R QR R +R+R R+R + +
Sbjct: 9 HTHTETETMDRQRERR-RETDRERDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQ 67
Query: 336 SKERFRDQDLASCDRDRSSRDRSPRDRDR---------KDKKRSYESANGRSEDRRSSEE 386
+ Q DRDR RD++R +++++ E R DR ++
Sbjct: 68 TDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKEREMERVRDREREKQ 127
Query: 387 REAG 390
+E G
Sbjct: 128 KEMG 131
Score = 56.2 bits (134), Expect = 5e-08
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 234 EKQEKRNQERLKRREEREREEREKLR-RSRSHSKNPKRSRSREHRRHRSRSMSRERKRRT 292
E++ R+ E + R++++ E E++R R R K R R + R R ER+R T
Sbjct: 95 ERETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERET 154
Query: 293 -RSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRD 351
R + E RHR R R R R R + R+R + + R + DR
Sbjct: 155 GRERKTEDRHRERERERKRERERKRETKE---RERHTDMERERQRE----------TDRK 201
Query: 352 RSSRDRSPRDRD 363
R + S R+RD
Sbjct: 202 RDRQRESERERD 213
Score = 54.3 bits (129), Expect = 2e-07
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 18/212 (8%)
Query: 83 ELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQ 142
E + MD + + DR + AK+ E + +R E N E + + +Q
Sbjct: 13 ETETMDRQRERRRETDRERDRAKESKTEDRHS-----ERDRQRDRERNRERDRDREREKQ 67
Query: 143 LGAEGNVE-ESQKVMD---EVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLG 198
EG + E ++ D E E+ R K+RE + R++ Q+QK R E
Sbjct: 68 TDREGERQRERERDRDRQRETERERDKERETD---RHTETDRERQKQKEREME------R 118
Query: 199 LHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKL 258
+ D +R G + RE+ + +R +E++ ++R + RE + ERE+
Sbjct: 119 VRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERK 178
Query: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKR 290
R ++ ++ R R+ R R RE +R
Sbjct: 179 RETKERERHTDMERERQRETDRKRDRQRESER 210
Score = 51.2 bits (121), Expect = 2e-06
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 285 SRERKRRTRSKSREK-RHRHRSRSSSRSRSRSHQ---RSRHSSRDRSRERSKRRSSKERF 340
S+ R T +++ R R R R + R R R+ + RHS RDR R+R + R ER
Sbjct: 3 SKTEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRDRERNR---ERD 59
Query: 341 RDQDL-ASCDRDRSSRDRSPRDRDR-------KDKKRSYESANGRSEDRRSSEERE 388
RD++ DR+ + RDRDR +DK+R + +R+ +ERE
Sbjct: 60 RDREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQKERE 115
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 84.7 bits (208), Expect = 1e-16
Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 10/162 (6%)
Query: 234 EKQEKRNQERLKRREERERE-EREKLRRSRSHSKNPKRSRSREHRRHRS----RSMSRER 288
+K+EKR R + R R R + RRSRS S+ S+SR RR +S RS SRER
Sbjct: 241 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRER 300
Query: 289 KRRTR--SKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLA 346
RR+R SK+R+K+ + + S++ +S+ +R SR SRER +RR S+ R
Sbjct: 301 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARR-SRSASRER-RRRRSRSGTRSPKKP 358
Query: 347 SCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
+ + SR SPR R +K+KK+ + R E RS+ +++
Sbjct: 359 RSPKRKLSRSPSPR-RHKKEKKKDKDKERSRDERERSTSKKK 399
Score = 78.2 bits (191), Expect = 1e-14
Identities = 63/195 (32%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 223 EKLEELKRVVAEKQEKRNQE-----RLKRREEREREEREKLRRSRSHSKNPKRSRS--RE 275
+K EE +R + R + R +R R R RSR SK+P+R RS RE
Sbjct: 240 DKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRE 299
Query: 276 H-RRHRSRSMSRERKRRTRSKSREK--------------RHRHRSRSSSRSRSRSHQRSR 320
RR RS S +R++K+ + K R K R R R SRS +RS ++ R
Sbjct: 300 RGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPR 359
Query: 321 HSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDR-----KDKKRSYESAN 375
R SR S RR KE+ +D+D +R R R+RS + + KD++R ES
Sbjct: 360 SPKRKLSRSPSPRRHKKEKKKDKDK---ERSRDERERSTSKKKKSKDKEKDRERKSESDK 416
Query: 376 GRSEDRRSSEEREAG 390
+ R +E E G
Sbjct: 417 DVKQVTRDYDEEEQG 431
Score = 72.8 bits (177), Expect = 5e-13
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 253 EEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSR 312
E +++R ++S +E +R SRS SR R+RRT S SR +R R RSR S S+
Sbjct: 221 EAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSK 280
Query: 313 SRSHQRSRHSSRDR--SRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRS 370
SRS +RS+ R R SRER +R S + RD+ ++ RS R+ + S
Sbjct: 281 SRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSAS 340
Query: 371 YESANGRSEDRRSSEER 387
E RS S ++
Sbjct: 341 RERRRRRSRSGTRSPKK 357
Score = 72.4 bits (176), Expect = 7e-13
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 237 EKRNQERLKRREEREREEREKLRRSRSHSKN-PKRSRSREHRRHRSRSMSRERKRRTRSK 295
+ R++ R K R RE+ RRSRS SK K+ +E +R ++ S RR+RS
Sbjct: 280 KSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSA 339
Query: 296 SREKRHRHRSRSSSRSRS---------------RSHQRSRHSSRDRSRERSKRRSSKERF 340
SRE+R R RSRS +RS R H++ + +D+ R R +R ER
Sbjct: 340 SRERRRR-RSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDER----ERS 394
Query: 341 RDQDLASCDRDRSSRDRSPRDRDRKDKKRSY-ESANGRSEDRRSSEERE 388
+ S D+++ +S D+D K R Y E G ++ EE++
Sbjct: 395 TSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEEKK 443
Score = 64.7 bits (156), Expect = 1e-10
Identities = 40/163 (24%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 230 RVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERK 289
R ++ ++K+ +++ K+R + + RRSRS S+ +R RSR R + S +RK
Sbjct: 305 RSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRK 364
Query: 290 RRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCD 349
+RS S + + + + + RSR + S + +S+++ K R K D+D+
Sbjct: 365 -LSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSE-SDKDVKQVT 422
Query: 350 RDRSSRDRS-PRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
RD ++ ++++K++K+ E+ G + + S E+ G+
Sbjct: 423 RDYDEEEQGYDSEKEKKEEKKPIET--GSPKTKECSVEKGTGD 463
Score = 52.4 bits (124), Expect = 7e-07
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 22/202 (10%)
Query: 157 DEVEKARAKKREAEEVYRNSMPASS----FQQQKLRVCEVCSAYLGLHDNDRRLADHFG- 211
D+ E+ R R R P+SS + + R S + RR H
Sbjct: 240 DKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRE 299
Query: 212 -GKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKR 270
G+ + R+K +E K K ++ +R RE R RRSRS +++PK+
Sbjct: 300 RGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRR--RRSRSGTRSPKK 357
Query: 271 SRS-----------REHRRHRSRSMSRERKR--RTRSKSREKRHRHRSRSSSRSRSRSHQ 317
RS R H++ + + +ER R R RS S++K+ + + + R +S S +
Sbjct: 358 PRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRER-KSESDK 416
Query: 318 RSRHSSRDRSRERSKRRSSKER 339
+ +RD E S KE+
Sbjct: 417 DVKQVTRDYDEEEQGYDSEKEK 438
Score = 36.6 bits (83), Expect = 0.040
Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTR 293
+K++K+++++ + R+ERER +K K+S+ +E R R ++ K+ TR
Sbjct: 375 KKEKKKDKDKERSRDERERSTSKK-----------KKSKDKEKDRERKSESDKDVKQVTR 423
Query: 294 SKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRS 353
E++ S + ++ + +++E S + + + R+ + D
Sbjct: 424 DYDEEEQ-----GYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEE 478
Query: 354 SRDRS 358
D S
Sbjct: 479 DMDMS 483
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 84.0 bits (206), Expect = 2e-16
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 15/164 (9%)
Query: 230 RVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRR-HRSRSMSRER 288
R ++K+ KR +R R +R+R RR RS S++ +RSRSR+ +R RSRS R+R
Sbjct: 25 RSPSDKRSKRGDDRRSRSRDRDR------RRERSRSRDKRRSRSRDRKRLRRSRSRERDR 78
Query: 289 KR-RTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR-----SSKERFRD 342
R R RS+SR++R R RSRS R RSRS S + +R RSK + SSKE+ +D
Sbjct: 79 SRERRRSRSRDRR-RSRSRSRGR-RSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKD 136
Query: 343 QDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEE 386
+D ++++ + + + + +KR R E R+ + E
Sbjct: 137 KDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME 180
Score = 81.3 bits (199), Expect = 1e-15
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 246 RREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREK-RHRHR 304
R +R +R RRSRS ++ +R RSR + RSRS R+R RR+RS+ R++ R R R
Sbjct: 25 RSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRR 84
Query: 305 SRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDR 364
SRS R RSRS R R S +SK+ ++ R +++ +D+ ++ D
Sbjct: 85 SRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKE-DE 143
Query: 365 KDKKRSYESANGRSEDRRSSEER 387
K+K N E+ R +ER
Sbjct: 144 KEKDAGNFDQNKLEEEMRKRKER 166
Score = 79.7 bits (195), Expect = 4e-15
Identities = 54/154 (35%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 247 REEREREEREKLR-----RSRSHSKNPKRSRSREHRRHRSRSMSRERKR-----RTRSKS 296
RE R +R R RSRS S + KRS+ + RR RSR R R+R + RS+S
Sbjct: 3 RESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRS 62
Query: 297 REKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRD 356
R+++ RSRS R RSR +RSR SRDR R RS+ R + R S + SR
Sbjct: 63 RDRKRLRRSRSRERDRSRERRRSR--SRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS 120
Query: 357 RSPRDRDRKDKKRSYESANGRSEDRRSSEEREAG 390
+ D K++ + +D+ +E++AG
Sbjct: 121 KEKTDGGESSKEKKKD-----KDDKEDEKEKDAG 149
Score = 75.9 bits (185), Expect = 6e-14
Identities = 54/157 (34%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 238 KRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSR 297
KR+ R R R R +RS+ RSR R+ RR RSRS KRR+RS+ R
Sbjct: 10 KRSASR-GRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRD---KRRSRSRDR 65
Query: 298 EKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKR--------RSSKERFRDQDLASCD 349
++ R RSR RSR R RSR R RSR R +R +S K R + D
Sbjct: 66 KRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTD 125
Query: 350 RDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEE 386
SS+++ +D+ DK+ E G + + EE
Sbjct: 126 GGESSKEKK---KDKDDKEDEKEKDAGNFDQNKLEEE 159
Score = 70.1 bits (170), Expect = 3e-12
Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 269 KRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSR 328
KRS SR RSRS S KR R R R R R R RSRSR +RSR SRDR R
Sbjct: 10 KRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR--SRDRKR 67
Query: 329 ERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDR-RSSEER 387
R R ++R R++ + R R R R R R+ + S + + ++E+R RS E+
Sbjct: 68 LRRSRSRERDRSRERRRS---RSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKT 124
Query: 388 EAGE 391
+ GE
Sbjct: 125 DGGE 128
Score = 66.6 bits (161), Expect = 4e-11
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRS 294
+ R +ER + R++R R++ R RS S+ RSR R R R R R+ R+RS
Sbjct: 43 RDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDR-----RRSRSRS 97
Query: 295 KSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSS 354
+ R R S ++ +RS + + + S+E+ K + KE +++D + D+++
Sbjct: 98 RGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLE 157
Query: 355 RDRSPRDRDRKDKKRSYE---SANGRSEDRRSSEEREAGE 391
+ R ++R +K R + + E ++ EE + G+
Sbjct: 158 EEMRKR-KERVEKWREEQRKKAMENIGELKKEIEEMKQGK 196
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 82.4 bits (202), Expect = 6e-16
Identities = 62/158 (39%), Positives = 86/158 (54%), Gaps = 14/158 (8%)
Query: 238 KRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREH--RRHRSRSMSRERKRRTRSK 295
K E+ K+ + R++ E+EK R S S++ KRS+S EH R+ S S SR RKR ++SK
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRS-KRSKSSEHKSRKRTSESRSRARKRSSKSK 1855
Query: 296 SREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKE-RFRDQDLASCDRDRSS 354
S HRS++ SRSRSR R R SSR RS+ R +R SKE R R S R+R
Sbjct: 1856 S------HRSQTRSRSRSR---RRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKR 1906
Query: 355 RDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
+ S RD +RK + + + RS S R + +
Sbjct: 1907 KRSSSRD-NRKTVRARSRTPSRRSRSHTPSRRRRSRSV 1943
Score = 81.3 bits (199), Expect = 1e-15
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 218 FIEIREKLEELK----RVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRS 273
F+++++ E+ K R EK++KR+ L+ R +R + K R+ S S++ R RS
Sbjct: 1793 FVKVKDTHEKSKKNKNRDKGEKEKKRDSS-LRSRSKRSKSSEHKSRKRTSESRSRARKRS 1851
Query: 274 REHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKR 333
+ + HRS++ SR R RR R SR + RS S+ + + + R SR+R R+RS
Sbjct: 1852 SKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSS 1911
Query: 334 RSSKERFRDQDLASCDRDRS---SRDRSPRDRDRKDKKRSYESANGRSEDRRS 383
R +++ R + R RS SR R R R+ S R+ RRS
Sbjct: 1912 RDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRS 1964
Score = 70.5 bits (171), Expect = 3e-12
Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH-- 279
R++ E + ++ K R + R R + RSRS S+ +RS S+E R+
Sbjct: 1837 RKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRG-RRSVSKEKRKRSP 1895
Query: 280 RSRSMSRERKRRTRSKSREKRH--RHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRS-- 335
+ RS SRERKR+ RS SR+ R R RSR+ SR RSRSH SR R RSR +RRS
Sbjct: 1896 KHRSKSRERKRK-RSSSRDNRKTVRARSRTPSR-RSRSHTPSR---RRRSRSVGRRRSFS 1950
Query: 336 -SKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRS-YESANGRSEDRR 382
S R R + + R S R R+P R R +RS S R+ RR
Sbjct: 1951 ISPSR-RSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1998
Score = 70.1 bits (170), Expect = 3e-12
Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRS-RSREHRRHR 280
R K + + K+ ++ R ++R + + R + R SRS S+ +RS RSR R R
Sbjct: 1825 RSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTR-SRSRSRRRRRSSRSRSKSRGR 1883
Query: 281 SRSMSRERKRRT---RSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSK 337
RS+S+E+++R+ RSKSRE++ + S +R R+ R+ S R RS S+RR S+
Sbjct: 1884 -RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT-PSRRSRSHTPSRRRRSR 1941
Query: 338 E--RFRDQDLASCDRDR--SSRDRSPRDRDRKDKKRS-YESANGRSEDRRS 383
R R ++ R R S R R+P R R +RS S R+ RRS
Sbjct: 1942 SVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRS 1992
Score = 66.6 bits (161), Expect = 4e-11
Identities = 61/170 (35%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 229 KRVVAEKQEKRNQERLKRREEREREE---REKLRRSRSHSKNPKRSRSREHR---RHRSR 282
+R V++++ KR+ + + ER+R+ R+ + R+ S+ P R RSR H R RSR
Sbjct: 1883 RRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSR-RSRSHTPSRRRRSR 1941
Query: 283 SMSRER------KRRTRSKSREKR-HRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRS 335
S+ R R RR+R+ SR R RSR+ SR +RSR SR RSR S+RR
Sbjct: 1942 SVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR-RSRTPSRRRR 2000
Query: 336 SKERFRDQDLASCDRDRSSRDRSPR----DRDRKDKKRSYESANGRSEDR 381
S+ R + S R R R+P R +KRS S GRS R
Sbjct: 2001 SRSVVRRRSF-SISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKR 2049
Score = 65.5 bits (158), Expect = 8e-11
Identities = 56/160 (35%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 233 AEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHR-----RHRSRSMSRE 287
+ + + R++ R +RR R R K R RS SK KR RS +HR R R RS SR+
Sbjct: 1856 SHRSQTRSRSRSRRRRRSSRS-RSKSRGRRSVSKE-KRKRSPKHRSKSRERKRKRSSSRD 1913
Query: 288 RKRRTRSKSREKRHRHRSRSSS---RSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQD 344
++ R++SR R RS + S RSRS +RS S R RRS R +
Sbjct: 1914 NRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT 1973
Query: 345 LASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
+ R S R R+P R R +R RS RR S
Sbjct: 1974 PSRRSRTPSRRSRTPSRRSRTPSRR----RRSRSVVRRRS 2009
Score = 32.3 bits (72), Expect = 0.76
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 28/110 (25%)
Query: 302 RHRSRSSSRSRSRSHQRSRHSSRDR-----------SRERSKR-----RSSKERFRDQDL 345
R RS +S S + S SS ++ + E+SK+ + KE+ RD L
Sbjct: 1763 RDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSL 1822
Query: 346 ASCDRDRSSRDRSPRDRDRK--------DKKRSYESANGRSEDRRSSEER 387
R RS R +S + RK +KRS +S + RS+ R S R
Sbjct: 1823 ----RSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSR 1868
Score = 30.8 bits (68), Expect = 2.2
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH 279
EI +K+EE+ V + E R + LK E R+ R ++ + P + +S++H++H
Sbjct: 60 EIVQKIEEVLSGVLDT-ELRYKPDLK---EGSRKSRCVSVQTDPTDEIPTK-KSKKHKKH 114
Query: 280 RSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSH 316
++ K++ + K +EK+++ R S S+++SH
Sbjct: 115 KN-------KKKKKKKEKEKKYK-RQPEESESKTKSH 143
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 82.4 bits (202), Expect = 6e-16
Identities = 62/158 (39%), Positives = 86/158 (54%), Gaps = 14/158 (8%)
Query: 238 KRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREH--RRHRSRSMSRERKRRTRSK 295
K E+ K+ + R++ E+EK R S S++ KRS+S EH R+ S S SR RKR ++SK
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRS-KRSKSSEHKSRKRTSESRSRARKRSSKSK 1855
Query: 296 SREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKE-RFRDQDLASCDRDRSS 354
S HRS++ SRSRSR R R SSR RS+ R +R SKE R R S R+R
Sbjct: 1856 S------HRSQTRSRSRSR---RRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKR 1906
Query: 355 RDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI 392
+ S RD +RK + + + RS S R + +
Sbjct: 1907 KRSSSRD-NRKTVRARSRTPSRRSRSHTPSRRRRSRSV 1943
Score = 81.3 bits (199), Expect = 1e-15
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 218 FIEIREKLEELK----RVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRS 273
F+++++ E+ K R EK++KR+ L+ R +R + K R+ S S++ R RS
Sbjct: 1793 FVKVKDTHEKSKKNKNRDKGEKEKKRDSS-LRSRSKRSKSSEHKSRKRTSESRSRARKRS 1851
Query: 274 REHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKR 333
+ + HRS++ SR R RR R SR + RS S+ + + + R SR+R R+RS
Sbjct: 1852 SKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSS 1911
Query: 334 RSSKERFRDQDLASCDRDRS---SRDRSPRDRDRKDKKRSYESANGRSEDRRS 383
R +++ R + R RS SR R R R+ S R+ RRS
Sbjct: 1912 RDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRS 1964
Score = 70.5 bits (171), Expect = 3e-12
Identities = 65/169 (38%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH-- 279
R++ E + ++ K R + R R + RSRS S+ +RS S+E R+
Sbjct: 1837 RKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRG-RRSVSKEKRKRSP 1895
Query: 280 RSRSMSRERKRRTRSKSREKRH--RHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRS-- 335
+ RS SRERKR+ RS SR+ R R RSR+ SR RSRSH SR R RSR +RRS
Sbjct: 1896 KHRSKSRERKRK-RSSSRDNRKTVRARSRTPSR-RSRSHTPSR---RRRSRSVGRRRSFS 1950
Query: 336 -SKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRS-YESANGRSEDRR 382
S R R + + R S R R+P R R +RS S R+ RR
Sbjct: 1951 ISPSR-RSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1998
Score = 70.1 bits (170), Expect = 3e-12
Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRS-RSREHRRHR 280
R K + + K+ ++ R ++R + + R + R SRS S+ +RS RSR R R
Sbjct: 1825 RSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTR-SRSRSRRRRRSSRSRSKSRGR 1883
Query: 281 SRSMSRERKRRT---RSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSK 337
RS+S+E+++R+ RSKSRE++ + S +R R+ R+ S R RS S+RR S+
Sbjct: 1884 -RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRT-PSRRSRSHTPSRRRRSR 1941
Query: 338 E--RFRDQDLASCDRDR--SSRDRSPRDRDRKDKKRS-YESANGRSEDRRS 383
R R ++ R R S R R+P R R +RS S R+ RRS
Sbjct: 1942 SVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRS 1992
Score = 66.6 bits (161), Expect = 4e-11
Identities = 61/170 (35%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 229 KRVVAEKQEKRNQERLKRREEREREE---REKLRRSRSHSKNPKRSRSREHR---RHRSR 282
+R V++++ KR+ + + ER+R+ R+ + R+ S+ P R RSR H R RSR
Sbjct: 1883 RRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSR-RSRSHTPSRRRRSR 1941
Query: 283 SMSRER------KRRTRSKSREKR-HRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRS 335
S+ R R RR+R+ SR R RSR+ SR +RSR SR RSR S+RR
Sbjct: 1942 SVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR-RSRTPSRRRR 2000
Query: 336 SKERFRDQDLASCDRDRSSRDRSPR----DRDRKDKKRSYESANGRSEDR 381
S+ R + S R R R+P R +KRS S GRS R
Sbjct: 2001 SRSVVRRRSF-SISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKR 2049
Score = 65.5 bits (158), Expect = 8e-11
Identities = 56/160 (35%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 233 AEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHR-----RHRSRSMSRE 287
+ + + R++ R +RR R R K R RS SK KR RS +HR R R RS SR+
Sbjct: 1856 SHRSQTRSRSRSRRRRRSSRS-RSKSRGRRSVSKE-KRKRSPKHRSKSRERKRKRSSSRD 1913
Query: 288 RKRRTRSKSREKRHRHRSRSSS---RSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQD 344
++ R++SR R RS + S RSRS +RS S R RRS R +
Sbjct: 1914 NRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT 1973
Query: 345 LASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
+ R S R R+P R R +R RS RR S
Sbjct: 1974 PSRRSRTPSRRSRTPSRRSRTPSRR----RRSRSVVRRRS 2009
Score = 32.3 bits (72), Expect = 0.76
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 28/110 (25%)
Query: 302 RHRSRSSSRSRSRSHQRSRHSSRDR-----------SRERSKR-----RSSKERFRDQDL 345
R RS +S S + S SS ++ + E+SK+ + KE+ RD L
Sbjct: 1763 RDRSAASPVVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSL 1822
Query: 346 ASCDRDRSSRDRSPRDRDRK--------DKKRSYESANGRSEDRRSSEER 387
R RS R +S + RK +KRS +S + RS+ R S R
Sbjct: 1823 ----RSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSR 1868
Score = 30.8 bits (68), Expect = 2.2
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH 279
EI +K+EE+ V + E R + LK E R+ R ++ + P + +S++H++H
Sbjct: 60 EIVQKIEEVLSGVLDT-ELRYKPDLK---EGSRKSRCVSVQTDPTDEIPTK-KSKKHKKH 114
Query: 280 RSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSH 316
++ K++ + K +EK+++ R S S+++SH
Sbjct: 115 KN-------KKKKKKKEKEKKYK-RQPEESESKTKSH 143
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 82.0 bits (201), Expect = 8e-16
Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 22/166 (13%)
Query: 236 QEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH-------RSRSMSRER 288
+EKR + R K R+ +E+EK +S S K+ +RSRS+E + S S+E+
Sbjct: 481 EEKRMRSRSKGRDHENVKEKEK--QSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEK 538
Query: 289 KRRTRSKSRE---KRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSK-ERFRDQD 344
RR +S+SRE + +H S +R RSRS RSR R R+ +R + RS + R+R+Q+
Sbjct: 539 DRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSRR-VRSRTHDRDRSRSKEYHRYREQE 597
Query: 345 LASCDRDRSSRDRSPRDRDR-KDKKRSYESANGRSEDRRSSEEREA 389
R RS R+P R R KD++R R D RSSE E+
Sbjct: 598 YRRRGRSRSRERRTPPGRSRSKDRRR-------RRRDSRSSEREES 636
Score = 74.3 bits (181), Expect = 2e-13
Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 45/263 (17%)
Query: 150 EESQKVMDEVEKARAKKR------EAEEVYRNSMP--ASSFQQQKLRVCEVCSAYLGLHD 201
E+ +KV D K+ +K+R E ++ Y+N + A S + K + H+
Sbjct: 421 EKEKKVKDH--KSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHN 478
Query: 202 N--DRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREE----- 254
++R+ G+ H ++EK ++ +++ R++E+ K+ E + E
Sbjct: 479 RNEEKRMRSRSKGRDHEN---VKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKS 535
Query: 255 REKLRRSRSHSKNPKRSRSRE--HRRHRSRSMSRERKRRTRSKSREKR-------HRHRS 305
+EK RR++S S+ ++ + + R R RS SR+R RR RS++ ++ HR+R
Sbjct: 536 KEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYRE 595
Query: 306 RS-SSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDR 364
+ R RSRS +R R RS++R +RR RD S +R
Sbjct: 596 QEYRRRGRSRSRERRTPPGRSRSKDRRRRR---------------RDSRSSEREESQSRN 640
Query: 365 KDKKRSYESANGRSEDRRSSEER 387
KDK R+ ES + ++ SE+R
Sbjct: 641 KDKYRNQESKSSHRKENSESEKR 663
Score = 74.3 bits (181), Expect = 2e-13
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH 279
E +K+++ K E+ +RN E+ + + + ++ + RS+S K+ + R +H R+
Sbjct: 421 EKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRN 480
Query: 280 RSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRH-----SSRDRSRERSKRR 334
+ M K R +EK + S+ + RSRS ++S+ + D S+ + K R
Sbjct: 481 EEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDR 540
Query: 335 SSKERFRDQDLASCDRDRSSRDRS---PRDRDRKDKKRSYESANGRSEDRRSSEERE 388
++ R R+ D+ +SR R RDR R+ + R+++ RS++ E+E
Sbjct: 541 RAQSRSRECDITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQE 597
Score = 74.3 bits (181), Expect = 2e-13
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 25/308 (8%)
Query: 98 DRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMD 157
D+ KKR S E + ER + N K + + NV+E +K D
Sbjct: 446 DKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSD 505
Query: 158 ----EVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEV----CSAYLGLHDNDRRLADH 209
+ E++R+K++ + +++ S ++K R + C G H + R +
Sbjct: 506 SKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRER 565
Query: 210 FGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPK 269
+ + R + R E R QE +R R RE R RSRS + +
Sbjct: 566 SRSRDRSRRVRSRTHDRDRSRS-KEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRR 624
Query: 270 RSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRS-R 328
R SR R S+S ++++ R SKS ++ S S+SR H S +S ++ R
Sbjct: 625 RRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHNSSNNSREKKADR 684
Query: 329 ERSKRRSSKERFRDQDLASC-------DRDRSSRDRSPRDR--------DRKDKKRSYES 373
++S K+ +D +L S ++ RSS ++ + K+KK +ES
Sbjct: 685 DQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSSVEKENQKSKGQENDHVHEKNKKFDHES 744
Query: 374 ANGRSEDR 381
+ G ED+
Sbjct: 745 SPGTDEDK 752
Score = 72.8 bits (177), Expect = 5e-13
Identities = 69/310 (22%), Positives = 141/310 (45%), Gaps = 41/310 (13%)
Query: 107 RLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEK----- 161
R+ E + V+ R +E +++ + ++ N E+ K ++V+K
Sbjct: 400 RVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSK 459
Query: 162 ARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEI 221
+R+K +E + + +++++R + + + +++ +D G
Sbjct: 460 SRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQ-SDSKGKDQERS--RS 516
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREERERE-------------------EREKLRRSR 262
+EK ++L+ E +++E+ +R + R RE R++ RR R
Sbjct: 517 KEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSRRVR 576
Query: 263 SHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHS 322
S + + RSRS+E+ R+R + E +RR RS+SRE+R RS S+ R R + SR S
Sbjct: 577 SRTHDRDRSRSKEYHRYREQ----EYRRRGRSRSRERR-TPPGRSRSKDRRRRRRDSRSS 631
Query: 323 SRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRR 382
R+ S+ R +K+++R+Q+ S R ++ S ++ K R + S+N E +
Sbjct: 632 EREESQSR-----NKDKYRNQESKSSHR----KENSESEKRMYSKSRDHNSSNNSREKKA 682
Query: 383 SSEEREAGEI 392
++ +I
Sbjct: 683 DRDQSPFSKI 692
Score = 62.0 bits (149), Expect = 9e-10
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 220 EIREKLEELKRVVAEKQEKRNQER-LKRREEREREEREKLRRSRSHSKNPKRSRSREHRR 278
E+ E E + V K+ K R + R+ E+ +K++ +S+SK R+ E
Sbjct: 387 ELNEIKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDD 446
Query: 279 HRSRSMSRERKRRTRSKSREK----------RHRHRSRSSSRSRSRSHQ----------- 317
+ + K ++RSKS+EK R SRS+ R H+
Sbjct: 447 KYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDS 506
Query: 318 RSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGR 377
+ + R RS+E+SK+ SK D S ++DR ++ RS R+ D K SY N R
Sbjct: 507 KGKDQERSRSKEKSKQLESKSNEHDHS-KSKEKDRRAQSRS-RECDITKGKHSY---NSR 561
Query: 378 SEDRRSSEER 387
+ +R S +R
Sbjct: 562 TRERSRSRDR 571
Score = 55.1 bits (131), Expect = 1e-07
Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 43/191 (22%)
Query: 239 RNQERLKR-------REEREREER--------------EKLRRSRSHSKNPKRSRSREHR 277
R+++R +R R+E +R +R +L + + ++P R + R+
Sbjct: 348 RSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKERKIT 407
Query: 278 RHRSRSMSRERK-------------------RRTRSKSREKRHRHRSRSSSRSRSRSHQR 318
HR+ S S RK RR K + +++ + R+ S+SRS+S ++
Sbjct: 408 DHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEK 467
Query: 319 SRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDR---KDKKRSYESAN 375
S+ RD R++ + + R + +D + D +D++R K+K + ES +
Sbjct: 468 SKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKS 527
Query: 376 GRSEDRRSSEE 386
+ +S E+
Sbjct: 528 NEHDHSKSKEK 538
Score = 52.4 bits (124), Expect = 7e-07
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 25/182 (13%)
Query: 233 AEKQEKRNQERLKRRE-EREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRR 291
A+++E++N+ER + RE + +R +++ ++ + R RR+R+ S SR R R
Sbjct: 294 ADEKERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRTPSRSRSRDRF 353
Query: 292 TRSKS-----REKRHRHRSRSSSRSR-----------SRSHQRS------RHSSRDRSRE 329
RS++ +E + R R SS R + +QRS R + R+
Sbjct: 354 RRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKERKITDHRNVS 413
Query: 330 RSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDK--KRSYESANGRSEDRRSSEER 387
S R +++ + +D S ++R R S +D K+K KR+ + +S+++ S+ER
Sbjct: 414 ESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKER 473
Query: 388 EA 389
++
Sbjct: 474 DS 475
Score = 49.7 bits (117), Expect = 5e-06
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 28/238 (11%)
Query: 154 KVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGK 213
K ++ K R ++RE E NS PAS Q++L V G R +
Sbjct: 293 KADEKERKNRERERERECNPPNSQPAS--YQRRLLVTRSGRKIKGRGPRRYRTPSRSRSR 350
Query: 214 LHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRS 273
R + E ++ ++ + R+ E + ++ +L + + ++P R +
Sbjct: 351 -------DRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKE 403
Query: 274 REHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRS-RSRSHQRSRHSSRDRSRERSK 332
R+ HR+ S S RK K ++ H+S S R R S + ++ ++ + R +SK
Sbjct: 404 RKITDHRNVSESPNRKNEKEKKVKD----HKSNSKERDIRRNSEKDDKYKNKVKKRAKSK 459
Query: 333 RRS-SKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREA 389
RS SKE+ S ++R S+ +R ++KR + GR + +E+++
Sbjct: 460 SRSKSKEK-------SKSKERDSK------HNRNEEKRMRSRSKGRDHENVKEKEKQS 504
Score = 48.5 bits (114), Expect = 1e-05
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 251 EREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSR 310
++EE+++ + S S S + S S + S S E +SK R+K+HR SR +
Sbjct: 184 KKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKK 243
Query: 311 SRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKK 368
+ + ++S+ S+ S + + R +++ +R +SP D K++K
Sbjct: 244 EKKK-RKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKERK 300
Score = 43.9 bits (102), Expect = 3e-04
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 37/192 (19%)
Query: 236 QEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSRE-------------------- 275
+EK + + K R+ + ++EK +R +S S +
Sbjct: 224 EEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPEN 283
Query: 276 ---HRRHRSRSMSRERKRRTRSKSRE-----------KRHRHRSRSSSRSRSRSHQRSRH 321
R+ ++ +ERK R R + RE +R +RS + + R +R R
Sbjct: 284 RFLMRKSPPKADEKERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRT 343
Query: 322 SSRDRSRERSKRRSSKERFRDQDLASCDRDR-SSRDRSPR-DRDRKDKKRSYESANGRSE 379
SR RSR+R +R + +R Q++ R R SS +R + D+ ++ + + + R +
Sbjct: 344 PSRSRSRDRFRRSETPPHWR-QEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVK 402
Query: 380 DRRSSEEREAGE 391
+R+ ++ R E
Sbjct: 403 ERKITDHRNVSE 414
Score = 36.6 bits (83), Expect = 0.040
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 21/91 (23%)
Query: 295 KSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRS------RERSKRRSSKERFRDQDLASC 348
K +KRH+ S SSS S SS D S E+SK+R K R
Sbjct: 185 KEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHR--------- 235
Query: 349 DRDRSSRDRSPRDRDRKDKKRSYESANGRSE 379
++SR +++K +K+S +SA+ SE
Sbjct: 236 ---KNSRKHK---KEKKKRKKSKKSASSESE 260
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 80.9 bits (198), Expect = 2e-15
Identities = 60/181 (33%), Positives = 88/181 (48%), Gaps = 28/181 (15%)
Query: 229 KRVVAEKQEKRNQERLKRREEREREEREKLRRSRSH--SKNPKRSRSREHRR-------H 279
++ + + + +Q R + + + + R RR RSH S+NP + RS H R H
Sbjct: 319 RKGILSQMGRHSQSRSHSKGKSQNQSRTP-RRGRSHNWSRNPSKERSHSHSRSSSKERDH 377
Query: 280 RSRSMSRERKRRTRSKSREKRHRH-RSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKE 338
R S R+ R++S S K+ H RSRS +++R RS RS + +RDRSR RS ++
Sbjct: 378 RGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKA--- 434
Query: 339 RFRDQDLASCDRDRS-------SRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
RD C R RS SR RSP + RS A RS R S+ER+ +
Sbjct: 435 --RD-----CSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQ 487
Query: 392 I 392
+
Sbjct: 488 L 488
Score = 77.8 bits (190), Expect = 2e-14
Identities = 55/156 (35%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 250 REREEREKLRRSRSHSKNPKRSRSREHRRHRS----------RSMSRER-KRRTRSKSRE 298
R+R + R HS+ S+ R+HRR RS RS S+ER RR+RS S+E
Sbjct: 471 RDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKE 530
Query: 299 KRHR-----HRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR---SSKERFRDQDLASCDR 350
++ R ++ R S+SRS S +R SR S+ER +RR SKER R Q +S +
Sbjct: 531 RQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEE 590
Query: 351 DRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEE 386
SR RSP + + R+ S R S+E
Sbjct: 591 RDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKE 626
Score = 76.6 bits (187), Expect = 3e-14
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 234 EKQEKRNQERLKRREEREREEREKLR-RSRSHSKNPKRSRSREHRRHRSRSMSRER---K 289
++ R++ K R+ K R RSRS S N R SR +++R SR R K
Sbjct: 398 QRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNK 457
Query: 290 RRTRSKSRE-KRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASC 348
R S+SR + R RSRS S S+ R H + S++R RS+ S + + R +S
Sbjct: 458 ARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSK 517
Query: 349 DRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
+RD R RSP ++ + RS RS+ R SEERE
Sbjct: 518 ERDH-RRSRSPSKERQRRQSRSPNKERDRSQSRSPSEERE 556
Score = 72.0 bits (175), Expect = 9e-13
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 238 KRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKR-RTRSKS 296
K R R +ER+ R+ S+ RS S+E +R +SRS ++ER R ++RS S
Sbjct: 493 KERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPS 552
Query: 297 REKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRD 356
E+ HR +SRS S+ R R RS R+R R R SS+ER + + + SR
Sbjct: 553 EEREHR-QSRSPSKERDRRRWRSPSKERER---RQSRSSSEERDHSRSRSPNKQSGYSRP 608
Query: 357 RSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
R+ + R+ S+ R SS+E + +
Sbjct: 609 RASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQ 643
Score = 70.9 bits (172), Expect = 2e-12
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 235 KQEKRNQERLKRREEREREEREKLR---RSRSHSKNPKRSRSR------EHRRHRSRSMS 285
+ R++ K R+ K R RSRS K RSRSR +H R RS + +
Sbjct: 411 RDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKA 470
Query: 286 RERKRRTRSKSREKRH---------RHRSRSSSRSRSRSHQRSRHSSRDRSRERSK---- 332
R+R R +RS S+E+ H R RS S S+ R ++SR SS++R RS+
Sbjct: 471 RDRSR-SRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSK 529
Query: 333 -------RRSSKERFRDQDLASCDRDRSSRDRSP-RDRDRKDKKRSYESANGRSEDRRSS 384
R +KER R Q + + + RSP ++RDR+ + RS R + R SS
Sbjct: 530 ERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRR-RWRSPSKERERRQSRSSS 588
Query: 385 EERE 388
EER+
Sbjct: 589 EERD 592
Score = 70.9 bits (172), Expect = 2e-12
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 234 EKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKR-RT 292
E+ +R++ K R+ R+ K R RS S++P S REHR+ RS S R+R+R R+
Sbjct: 518 ERDHRRSRSPSKERQRRQSRSPNK-ERDRSQSRSP--SEEREHRQSRSPSKERDRRRWRS 574
Query: 293 RSKSREKR-------HRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDL 345
SK RE+R R SRS S ++ + R R SS++++ RS R SKE Q
Sbjct: 575 PSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRS-RTPSKEGNHSQSR 633
Query: 346 ASCDRDRSSRDRSPRDRD-RKDKKRSYESANGRSEDRRSS 384
S S+ PR D ++ R+ + R+ + SS
Sbjct: 634 TSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSKTSS 673
Score = 70.5 bits (171), Expect = 3e-12
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 234 EKQEKRNQERLKRREER-EREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRER---K 289
E+ ++ K R+ R R++ RS+S S N +R SR +++R SR R K
Sbjct: 362 ERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYK 421
Query: 290 RRTRSKSR---EKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLA 346
R RS+SR + R RSRS ++R RS RS + +RD SR RS + +++R R +
Sbjct: 422 ARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNK-ARDRSRSRS-P 479
Query: 347 SCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
S +RD S ++RD + + RS + R SS+ER+
Sbjct: 480 SKERDHSQLGSPSKERDHR-RSRSPSKERQCRQSRSSSKERD 520
Score = 64.3 bits (155), Expect = 2e-10
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRH 279
E+ +++ + + + + + R R ++ R RSHS SR+R R
Sbjct: 261 EMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRK 320
Query: 280 RSRS-MSRERKRRTRSKSR---EKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRS 335
S M R + R+ SK + + R R RS + SR+ S +RS SR S+ER R S
Sbjct: 321 GILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGS 380
Query: 336 S---KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
S KE R Q + + SR RSP + + RS A RS R ++ R+
Sbjct: 381 SSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARD 436
Score = 59.7 bits (143), Expect = 4e-09
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 222 REKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRS 281
R +E +R + K R ERE R+ S+ + RS S+E R +S
Sbjct: 525 RSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQS 584
Query: 282 RSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFR 341
RS S ER +RS+S K+ + SR + S+ ++H RSR S++ + +S R SSKE
Sbjct: 585 RSSSEERD-HSRSRSPNKQSGY-SRPRASSKEKAHSRSRTPSKEGNHSQS-RTSSKE--- 638
Query: 342 DQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSSE 385
D +S+ RSP D KRS + S++R S+
Sbjct: 639 ------SDPSQSTVPRSP------DWKRSPTRTSSLSQNRTPSK 670
Score = 47.4 bits (111), Expect = 2e-05
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 232 VAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRR 291
+ K++ N R+ + + R +S+S SR + + + +RS + +
Sbjct: 225 IPSKEKSDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRS-----RPQ 279
Query: 292 TRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS--KERFRDQDLASCD 349
+ S+SR R RSRS S+ R+ S RS R+ SR RS+ R + R S
Sbjct: 280 SHSQSRSPR---RSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHS 336
Query: 350 RDRS-SRDRSPRDRDRKDKKRSYESANGRSEDRRSSEERE 388
+ +S ++ R+PR + R+ S R SS+ER+
Sbjct: 337 KGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERD 376
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 261 SRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSR 320
S S SK+ K + ++ +R S SR R + R+ SR S++S S R HQR
Sbjct: 58 SPSSSKSTKSTSTKRAPSNRPSSRSRVRSK-ARTPSRVSTDTRTSKASKASDVRCHQRRG 116
Query: 321 HSSRDRSRERSKRRSSKERFRDQDLAS---------CDRDRSSRDRSPRDRDRKDKKRSY 371
SR R+ R RSSK R AS +SR R+P + + + +SY
Sbjct: 117 THSRGRTPGRRGSRSSK---RSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSY 173
Query: 372 ESANGRSEDRRSSEER 387
+ +R S+ R
Sbjct: 174 GRPRTSNRERSDSQPR 189
Score = 36.6 bits (83), Expect = 0.040
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 280 RSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKER 339
R+ MS + T+S S ++ +R S SR RS++ SR S+ R+ + SK +
Sbjct: 53 RNSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCH 112
Query: 340 FRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESAN 375
R R SR R+P R + KRS A+
Sbjct: 113 QR--------RGTHSRGRTPGRRGSRSSKRSPSRAS 140
Score = 33.1 bits (74), Expect = 0.44
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 59/174 (33%)
Query: 222 REKLEELKRVVAEKQEKR-----NQERLKRREEREREEREKLRRSRSHSKNPKRSRSREH 276
+E+ R +E++E R ++ER +RR +ERE+ R+SRS S+ SRSR
Sbjct: 541 KERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERER-RQSRSSSEERDHSRSRSP 599
Query: 277 RRH----RSRSMSRERKR-RTRSKSREKRH------------------------RHRSRS 307
+ R R+ S+E+ R+R+ S+E H R +R+
Sbjct: 600 NKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRT 659
Query: 308 SSRSRSRSHQR-SRHS-----------SRDRSR------------ERSKRRSSK 337
SS S++R+ + S HS S+D S+ ERS SSK
Sbjct: 660 SSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQADATTSKATLPGERSSSSSSK 713
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 79.0 bits (193), Expect = 7e-15
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 17/161 (10%)
Query: 248 EEREREEREKLRRSRSHSKNPKRSRSREH--RRHRSRSMSRERKRRTRSKSREKRHRHRS 305
E R + +++ RRS S S + R+ SR+ R+ RS+S S R + RS S ++R RHRS
Sbjct: 11 ESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRS 70
Query: 306 RSSS-----RSRSRSHQRSRHSS----RDRSRERSKRRSSKERFRDQDLASCDRDRSSRD 356
SSS R RSRS R R S R RS+ R++R S+ R R +S +R R
Sbjct: 71 SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSS-ERSSHRRT 129
Query: 357 RS-PRDRDRK----DKKRSYESANGRSEDRRSSEEREAGEI 392
RS RDR+R+ +KR E G+ ++ + + E+G I
Sbjct: 130 RSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNI 170
Score = 72.8 bits (177), Expect = 5e-13
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 226 EELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRS-RSREH-----RRH 279
EE R +K+ +R + R ++ R+SRS S++ R + R H RRH
Sbjct: 9 EEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRH 68
Query: 280 RSRSMS----RERKRRTRSKSREKRHR-HRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR 334
RS S S R ++ R+RS+ R K +R RSRS SR+R RS R R S RS ERS R
Sbjct: 69 RSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPRLRSHSRSSERSSHR 127
Query: 335 SSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESAN 375
++ R RD++ R RD+ R+++ KDK + E N
Sbjct: 128 RTRSRSRDRE------RRKGRDKEKREKE-KDKGKDKELHN 161
Score = 68.2 bits (165), Expect = 1e-11
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRS 294
+ + R+ R + + R + R S S S +R RSR R R +S R +R+RS
Sbjct: 45 RSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSY---RVQRSRS 101
Query: 295 KSREKRHRHRSRSSSRSRSR---SHQRSRHSSRDR----SRERSKRRSSKERFRDQDLAS 347
KSR +R R R R S SRS SH+R+R SRDR R++ KR K++ +D++L +
Sbjct: 102 KSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHN 161
Query: 348 CDRDRSSR-----DRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
R S + P K + + A ++++ ++ER E
Sbjct: 162 IKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEE 210
Score = 58.9 bits (141), Expect = 8e-09
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRS-RSRSH- 316
RRS + + R ++HRR S S S + + +R K K R +SRS SR + RSH
Sbjct: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKS-RSKSRSWSRDLQPRSHS 61
Query: 317 --QRSRHSSRDRSRERSKRRSSKER-------FRDQDLASCDRDRSSRDRSP-RDRDRKD 366
+R RH S S S+R+ S+ R +R Q S R R SR R R R
Sbjct: 62 YDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSS 121
Query: 367 KKRSYESANGRSEDR-----RSSEERE 388
++ S+ RS DR R E+RE
Sbjct: 122 ERSSHRRTRSRSRDRERRKGRDKEKRE 148
Score = 57.0 bits (136), Expect = 3e-08
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 243 RLKRREEREREEREKLRRSRSHSKN-PKRSRSREHRRHRSRSMSRERKRRTRSKSREKRH 301
R KR R R + R RS SK+ +RSRSR R SRS R RRTRS+SR++
Sbjct: 79 RRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRER 138
Query: 302 RHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRD 361
R R + + + + + E ++ E + A + D
Sbjct: 139 RKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKAD 198
Query: 362 RDRKDKKRSYESANGRSEDRRSS 384
K K+R+ E A R E+ +++
Sbjct: 199 EALKAKERNEEEAKRRKEEDQAT 221
Score = 40.4 bits (93), Expect = 0.003
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 24/139 (17%)
Query: 229 KRVVAEKQEKRNQERLKRREEREREEREKLR-RSRSHSKNPKRS-------RSREHRRHR 280
KR + + + R++R + R R + R R RSHS++ +RS RSR+ R +
Sbjct: 81 KRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRK 140
Query: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDR-------------- 326
R + K + + K +E + R S + H ++ R
Sbjct: 141 GRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEA 200
Query: 327 --SRERSKRRSSKERFRDQ 343
++ER++ + + + DQ
Sbjct: 201 LKAKERNEEEAKRRKEEDQ 219
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 77.8 bits (190), Expect = 2e-14
Identities = 57/158 (36%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 245 KRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKR-RTRSKSREKRHRH 303
+R R RRSRS S+ RSRSR + RSRS SR + R R+RSK R+ R +
Sbjct: 188 RRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKS 247
Query: 304 RSRSSSRSRSRSHQRSRHSSR-DRSRERSKRRSSKERFRDQDLASCDRDRS--------- 353
+S+ S S SH RSR ++SR RS+ RS KE + D+ S R RS
Sbjct: 248 KSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKG-DIKSKSRSRSQSRSNSPLP 306
Query: 354 -----SRDRSPRDRDRKDKKRSYESANGRSEDRRSSEE 386
+R SP + + RS + RS R SS +
Sbjct: 307 VPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD 344
Score = 73.2 bits (178), Expect = 4e-13
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 207 ADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSK 266
AD + + G IE R ++KR + +K + + R R E++ + RS+S
Sbjct: 139 ADAHKERTNEGVIEFRS-YSDMKRAL----DKLDGTEINGRNIRLIEDKPRTSHRRSYSG 193
Query: 267 NPKRSRSREHRRHRSRSMSRERKRRTRSKSREK-RHRHRSRSSSRSRSRSHQRSRHSSRD 325
+ RSRSR RR RSRS R R+RS+S K R R RSRS RSRSRS R + S+
Sbjct: 194 S--RSRSRSRRRSRSRS---RRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGR-KSRSKS 247
Query: 326 RSRERSKRRS-SKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSEDRRSS 384
+S+ +S R S S R R +D R R SR RSP++ + D K + RS+ R +S
Sbjct: 248 KSKPKSDRGSHSHSRSRSKDEYEKSRSR-SRSRSPKENGKGDIK---SKSRSRSQSRSNS 303
Score = 62.8 bits (151), Expect = 5e-10
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 239 RNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSRE 298
+++ R + R + R K R+SRS SK+ +S H RSRS K R+RS+SR
Sbjct: 221 KSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRS 280
Query: 299 KRHRHRSRSSSRSRSRSHQRS-------------------RHSSRDRSRERSKRRS-SKE 338
+ + S+SRSRS RS R +SR RSR RSK RS S+
Sbjct: 281 PKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRS 340
Query: 339 RFRD 342
RD
Sbjct: 341 SSRD 344
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 77.8 bits (190), Expect = 2e-14
Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 233 AEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRT 292
+ K++ + R K R R S S S++ RSRS + RSRS SRER R
Sbjct: 193 SNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSR 252
Query: 293 RSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDR 352
SKSR HR SS R RS S S SS +R+R+RS+ RSS R + R
Sbjct: 253 GSKSRSSSRSHRGSSSPRKRSYS---SSSSSPERNRKRSRSRSSSSGDR--------KKR 301
Query: 353 SSRDRSPRDRDRKDKKRSYESANGRSEDR 381
+R RSP R R S+ + S+ +
Sbjct: 302 RTRSRSPERRHRSSSGSSHSGSRSSSKKK 330
Score = 77.0 bits (188), Expect = 3e-14
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 198 GLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREK 257
G +D R + GK +G I +++E+ + E+ E + + K E+ + ++ +
Sbjct: 122 GEYDEFGRKKKKYRGKA-VGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADL 180
Query: 258 LRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQ 317
+ + S+ ++ + +RR RS+S S + +RS S R RSRS SRS S S
Sbjct: 181 SKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSS-RSRSRSRSRSSSSSQS 239
Query: 318 RSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGR 377
RSR SSR+RSR R + S R + R SS SP +R+RK + RS S++G
Sbjct: 240 RSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSP-ERNRK-RSRSRSSSSGD 297
Query: 378 SEDRRS 383
+ RR+
Sbjct: 298 RKKRRT 303
Score = 68.6 bits (166), Expect = 1e-11
Identities = 66/184 (35%), Positives = 91/184 (49%), Gaps = 24/184 (13%)
Query: 220 EIREKLEELKRVVAEKQEKRNQERLKR-----REEREREEREKLRRSRSHSKNP---KRS 271
E ++ E+L + ++ E + L + EE + +++ RRSRS S++ S
Sbjct: 156 EEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSS 215
Query: 272 RSREHRRHRSRSMSRER-----KRRTRSKSREKRHRHRSR-SSSRSRSRSHQRSRHSSRD 325
RS RSRS SR R + R+RS SRE R RSR S SRS SRSH R SS
Sbjct: 216 RSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRE---RSRSRGSKSRSSSRSH---RGSSSP 269
Query: 326 RSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGRSED-RRSS 384
R R S SS ER R + S R SS DR R + +R + S++G S RSS
Sbjct: 270 RKRSYSSSSSSPERNRKR---SRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSS 326
Query: 385 EERE 388
+++
Sbjct: 327 SKKK 330
Score = 38.9 bits (89), Expect = 0.008
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 15/191 (7%)
Query: 109 AETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKRE 168
+E +EE E +K ++L+E+ + A + + + + EE ++R+K R
Sbjct: 153 SEGEEEDEDEDLSK----YKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRS 208
Query: 169 AEE--VYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLE 226
+ R+S P+SS + + R S+ + R + G K R
Sbjct: 209 SHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSS 268
Query: 227 ELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSR 286
KR + + R + R K RR+RS S RRHRS S S
Sbjct: 269 PRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRS---------PERRHRSSSGSS 319
Query: 287 ERKRRTRSKSR 297
R+ SK +
Sbjct: 320 HSGSRSSSKKK 330
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 77.4 bits (189), Expect = 2e-14
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 198 GLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREK 257
G +D R + GK +G I +++E+ + E+ E + + K E+ + ++ +
Sbjct: 122 GEYDEFGRKKKKYRGKA-VGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADL 180
Query: 258 LRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQ 317
+ + S+ ++ + +RR RS+S S + +RS S R RSRS SRS S S
Sbjct: 181 SKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSS-RSRSRSRSRSSSSSQS 239
Query: 318 RSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESANGR 377
RSR SSR+RSR R + S R + R SS SP +R+RK + RS S++G
Sbjct: 240 RSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSP-ERNRK-RSRSRSSSSGD 297
Query: 378 SEDR----RSSEEREAGE 391
+ R RS E + GE
Sbjct: 298 RKKRRTRSRSPESQVIGE 315
Score = 30.8 bits (68), Expect = 2.2
Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 6/159 (3%)
Query: 109 AETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKRE 168
+E +EE E +K ++L+E+ + A + + + + EE ++R+K R
Sbjct: 153 SEGEEEDEDEDLSK----YKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRS 208
Query: 169 AEE--VYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLE 226
+ R+S P+SS + + R S+ + R + G K R
Sbjct: 209 SHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSS 268
Query: 227 ELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHS 265
KR + + R + R K RR+RS S
Sbjct: 269 PRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRS 307
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.127 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,390,694
Number of Sequences: 37866
Number of extensions: 608906
Number of successful extensions: 31621
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 900
Number of HSP's that attempted gapping in prelim test: 7086
Number of HSP's gapped (non-prelim): 8765
length of query: 392
length of database: 18,247,518
effective HSP length: 104
effective length of query: 288
effective length of database: 14,309,454
effective search space: 4121122752
effective search space used: 4121122752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.