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Search of human proteins with 239746550
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo
sapiens]
(102 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo ... 213 3e-56
gi|169217749 PREDICTED: hCG2042718 [Homo sapiens] 198 9e-52
gi|239750222 PREDICTED: hCG2042718 [Homo sapiens] 198 9e-52
gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo sap... 198 9e-52
gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo ... 197 1e-51
gi|169218130 PREDICTED: hypothetical protein [Homo sapiens] 180 2e-46
gi|169217341 PREDICTED: hypothetical protein [Homo sapiens] 180 2e-46
gi|239750225 PREDICTED: hypothetical protein XP_002347322 [Homo ... 130 2e-31
gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo sap... 129 4e-31
gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo sap... 129 4e-31
gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo sa... 129 4e-31
gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo sa... 128 1e-30
gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member ... 117 3e-27
gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member ... 117 3e-27
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 79 6e-16
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 79 6e-16
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 79 6e-16
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 75 8e-15
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 75 8e-15
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 74 2e-14
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 44 4e-05
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens] 40 3e-04
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo... 40 3e-04
gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo... 40 3e-04
gi|118150656 ankyrin repeat domain 7 [Homo sapiens] 40 3e-04
gi|96975023 ankyrin repeat and death domain containing 1A [Homo ... 40 3e-04
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 39 9e-04
gi|7706194 proline rich 16 [Homo sapiens] 38 0.002
gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens] 37 0.003
gi|239757617 PREDICTED: similar to hCG1793014 [Homo sapiens] 36 0.006
>gi|239746550 PREDICTED: hypothetical protein XP_002343775 [Homo
sapiens]
Length = 102
Score = 213 bits (542), Expect = 3e-56
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL
Sbjct: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK 102
DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK 102
>gi|169217749 PREDICTED: hCG2042718 [Homo sapiens]
Length = 102
Score = 198 bits (503), Expect = 9e-52
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA+GSIEHVYTGS YRIWDSELQKIHRAAVKGDAAGVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK 102
DA DKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQP K
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|239750222 PREDICTED: hCG2042718 [Homo sapiens]
Length = 102
Score = 198 bits (503), Expect = 9e-52
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA+GSIEHVYTGS YRIWDSELQKIHRAAVKGDAAGVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK 102
DA DKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQP K
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|169166158 PREDICTED: hypothetical protein LOC642204 [Homo
sapiens]
Length = 102
Score = 198 bits (503), Expect = 9e-52
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA+GSIEHVYTGS YRIWDSELQKIHRAAVKGDAAGVE CLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSRYRIWDSELQKIHRAAVKGDAAGVECCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK 102
DA DKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQP K
Sbjct: 61 DAPDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPPK 102
>gi|239747129 PREDICTED: hypothetical protein XP_002344491 [Homo
sapiens]
Length = 102
Score = 197 bits (501), Expect = 1e-51
Identities = 96/102 (94%), Positives = 97/102 (95%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA+GSIEHVYTGSGYRI DSELQKIHRAAVKGDA GVERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQPLK 102
DALDKQHRVSLLCPGWCPMAQSWLTATSAC VQAILLPQP K
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACWVQAILLPQPSK 102
>gi|169218130 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 180 bits (457), Expect = 2e-46
Identities = 90/99 (90%), Positives = 91/99 (91%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGS R Q A+GSIEHVY GSGYRI DSELQKIHRAAVKGDAAGVERCLARRSG L
Sbjct: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQ 99
DALDKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQ 99
>gi|169217341 PREDICTED: hypothetical protein [Homo sapiens]
Length = 102
Score = 180 bits (457), Expect = 2e-46
Identities = 90/99 (90%), Positives = 91/99 (91%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGS R Q A+GSIEHVY GSGYRI DSELQKIHRAAVKGDAAGVERCLARRSG L
Sbjct: 1 MKLFGFGSCRGQRAHGSIEHVYMGSGYRIRDSELQKIHRAAVKGDAAGVERCLARRSGGL 60
Query: 61 DALDKQHRVSLLCPGWCPMAQSWLTATSACRVQAILLPQ 99
DALDKQHRVSLLCPGWCPMAQS LTATSAC VQAILLPQ
Sbjct: 61 DALDKQHRVSLLCPGWCPMAQSGLTATSACSVQAILLPQ 99
>gi|239750225 PREDICTED: hypothetical protein XP_002347322 [Homo
sapiens]
Length = 68
Score = 130 bits (328), Expect = 2e-31
Identities = 64/68 (94%), Positives = 65/68 (95%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA+GSIEHVYTGSGYRI DSELQKIHRAAVKGDA GVERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAHGSIEHVYTGSGYRIRDSELQKIHRAAVKGDAVGVERCLARRSGDL 60
Query: 61 DALDKQHR 68
DALDKQHR
Sbjct: 61 DALDKQHR 68
>gi|60460920 ankyrin repeat domain 20 family, member A3 [Homo
sapiens]
Length = 823
Score = 129 bits (325), Expect = 4e-31
Identities = 64/71 (90%), Positives = 66/71 (92%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA GSI+HVYTGSGYRI DSELQKIHRAAVKGDAA VERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|60115723 ankyrin repeat domain 20 family, member A2 [Homo
sapiens]
Length = 823
Score = 129 bits (325), Expect = 4e-31
Identities = 64/71 (90%), Positives = 66/71 (92%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA GSI+HVYTGSGYRI DSELQKIHRAAVKGDAA VERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo
sapiens]
Length = 823
Score = 129 bits (325), Expect = 4e-31
Identities = 64/71 (90%), Positives = 66/71 (92%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA GSI+HVYTGSGYRI DSELQKIHRAAVKGDAA VERCLARRSGDL
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|149363679 ankyrin repeat domain 20 family, member A4 [Homo
sapiens]
Length = 823
Score = 128 bits (321), Expect = 1e-30
Identities = 63/71 (88%), Positives = 66/71 (92%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGFGSRR QTA GSI+HVYTGSGYRI DSELQKIHRAAVKGDAA VERCLARRSG+L
Sbjct: 1 MKLFGFGSRRGQTAQGSIDHVYTGSGYRIRDSELQKIHRAAVKGDAAEVERCLARRSGEL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member
A5 [Homo sapiens]
Length = 823
Score = 117 bits (292), Expect = 3e-27
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGF SRR QT GSI+H+YTGSGYRI SELQKIH+AAVKGDAA +ERCLARRSGDL
Sbjct: 1 MKLFGFRSRRGQTVLGSIDHLYTGSGYRIRYSELQKIHKAAVKGDAAEMERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member
A5 [Homo sapiens]
Length = 823
Score = 117 bits (292), Expect = 3e-27
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 1 MKLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDL 60
MKLFGF SRR QT GSI+H+YTGSGYRI SELQKIH+AAVKGDAA +ERCLARRSGDL
Sbjct: 1 MKLFGFRSRRGQTVLGSIDHLYTGSGYRIRYSELQKIHKAAVKGDAAEMERCLARRSGDL 60
Query: 61 DALDKQHRVSL 71
DALDKQHR +L
Sbjct: 61 DALDKQHRTAL 71
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 79.3 bits (194), Expect = 6e-16
Identities = 41/70 (58%), Positives = 47/70 (67%)
Query: 2 KLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLD 61
KLF FG R Q S++ Y G GY I D EL+KIHRAA+KGDAA VERCL RR DLD
Sbjct: 110 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 169
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 170 ARDRKDRTVL 179
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 79.3 bits (194), Expect = 6e-16
Identities = 41/70 (58%), Positives = 47/70 (67%)
Query: 2 KLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLD 61
KLF FG R Q S++ Y G GY I D EL+KIHRAA+KGDAA VERCL RR DLD
Sbjct: 3 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 62
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 63 ARDRKDRTVL 72
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 79.3 bits (194), Expect = 6e-16
Identities = 41/70 (58%), Positives = 47/70 (67%)
Query: 2 KLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLD 61
KLF FG R Q S++ Y G GY I D EL+KIHRAA+KGDAA VERCL RR DLD
Sbjct: 110 KLFSFGRRLGQALLSSMDQEYAGPGYDIRDWELRKIHRAAIKGDAAEVERCLTRRFRDLD 169
Query: 62 ALDKQHRVSL 71
A D++ R L
Sbjct: 170 ARDRKDRTVL 179
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 75.5 bits (184), Expect = 8e-15
Identities = 39/70 (55%), Positives = 44/70 (62%)
Query: 2 KLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLD 61
KL FG R Q S++ Y G GY I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 102 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 161
Query: 62 ALDKQHRVSL 71
DK+ R L
Sbjct: 162 VRDKKDRTVL 171
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 75.5 bits (184), Expect = 8e-15
Identities = 39/70 (55%), Positives = 44/70 (62%)
Query: 2 KLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLD 61
KL FG R Q S++ Y G GY I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 131 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 190
Query: 62 ALDKQHRVSL 71
DK+ R L
Sbjct: 191 VRDKKDRTVL 200
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 74.3 bits (181), Expect = 2e-14
Identities = 38/70 (54%), Positives = 44/70 (62%)
Query: 2 KLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLD 61
KL FG R Q S++ Y G GY I D EL+KIHRAA+KGDAA VE CL RR DLD
Sbjct: 131 KLLSFGRRLGQALLSSMDQEYAGRGYHIRDWELRKIHRAAIKGDAAEVEHCLTRRFRDLD 190
Query: 62 ALDKQHRVSL 71
D++ R L
Sbjct: 191 VRDRKDRTVL 200
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 43.5 bits (101), Expect = 4e-05
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 3 LFGFGSRRSQTANGSIEH---VYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGD 59
L F R+ +A G E Y+ GY + D +L KIH+AA G+ A V++ L R
Sbjct: 13 LGSFARRQRSSAGGGGEPGEGAYSQPGYHVRDRDLGKIHKAASAGNVAKVQQILLLRKNG 72
Query: 60 LDALDKQHRVSL 71
L+ DK +R +L
Sbjct: 73 LNDRDKMNRTAL 84
>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
Length = 917
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 22 YTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLDALDKQHRVSLL 72
++ GYR+ +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
sapiens]
Length = 917
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 22 YTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLDALDKQHRVSLL 72
++ GYR+ +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
>gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo
sapiens]
Length = 917
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 22 YTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLDALDKQHRVSLL 72
++ GYR+ +L IH+AA+ GD V + R DL+ DK++R +LL
Sbjct: 27 FSNPGYRVRQKDLGMIHKAAIAGDVNKVMESILLRLNDLNDRDKKNRTALL 77
>gi|118150656 ankyrin repeat domain 7 [Homo sapiens]
Length = 254
Score = 40.4 bits (93), Expect = 3e-04
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 2 KLFGFGSRRSQTANGSIEHVYTGSGYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLD 61
KLF F R+++T + GY + + +L+K+HRAA GD ++ L + D++
Sbjct: 3 KLFSFWKRKNETRS---------QGYNLREKDLKKLHRAASVGDLKKLKEYLQIKKYDVN 53
Query: 62 ALDKQHRVSL 71
DK++R L
Sbjct: 54 MQDKKYRTPL 63
>gi|96975023 ankyrin repeat and death domain containing 1A [Homo
sapiens]
Length = 522
Score = 40.4 bits (93), Expect = 3e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Query: 75 GWCPMAQSWLTATSACRVQAILLPQP 100
GW MA+S LTATSA RVQ IL+PQP
Sbjct: 495 GWSTMARSQLTATSASRVQMILVPQP 520
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 38.9 bits (89), Expect = 9e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 75 GWCPMAQSWLTATSACRVQAILLPQPLK 102
GW MA+S TATS ++QAILLPQP K
Sbjct: 299 GWSAMARSRFTATSTSQIQAILLPQPPK 326
>gi|7706194 proline rich 16 [Homo sapiens]
Length = 281
Score = 37.7 bits (86), Expect = 0.002
Identities = 19/22 (86%), Positives = 20/22 (90%)
Query: 79 MAQSWLTATSACRVQAILLPQP 100
MAQS LTATSA +VQAILLPQP
Sbjct: 1 MAQSGLTATSASQVQAILLPQP 22
>gi|218083233 chitinase domain containing 1 isoform b [Homo
sapiens]
Length = 418
Score = 37.4 bits (85), Expect = 0.003
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 73 CPGWCPMAQSWLTATSACRVQ 93
CPGW MA+SWLTATSA + Q
Sbjct: 44 CPGWSAMARSWLTATSATQSQ 64
>gi|239757617 PREDICTED: similar to hCG1793014 [Homo sapiens]
Length = 251
Score = 36.2 bits (82), Expect = 0.006
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 21 VYTGS-GYRIWDSELQKIHRAAVKGDAAGVERCLARRSGDLDALDKQHRVSL 71
VYT + Y I +L+KIH+AA +G A +ER + + + DL+ D + R +L
Sbjct: 25 VYTNNDSYVIHHGDLRKIHKAASRGQAWKLERMMKKTTMDLNIRDAKKRTAL 76
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.134 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,910,651
Number of Sequences: 37866
Number of extensions: 136236
Number of successful extensions: 389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 326
Number of HSP's gapped (non-prelim): 64
length of query: 102
length of database: 18,247,518
effective HSP length: 73
effective length of query: 29
effective length of database: 15,483,300
effective search space: 449015700
effective search space used: 449015700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.