BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo sapiens] (536 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 1108 0.0 gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 50 4e-06 gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 50 7e-06 gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 50 7e-06 gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 50 7e-06 gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 50 7e-06 gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05 gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05 gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05 gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04 gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 44 3e-04 gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 44 3e-04 gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04 gi|239756278 PREDICTED: hypothetical protein XP_002344871 [Homo ... 43 6e-04 gi|239750809 PREDICTED: hypothetical protein XP_002347567 [Homo ... 43 6e-04 gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 43 6e-04 gi|239745169 PREDICTED: hypothetical protein XP_002343388 [Homo ... 43 6e-04 gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ... 42 0.001 gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ... 42 0.001 gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 42 0.001 gi|22027568 alpha 1 type XIII collagen isoform 2 [Homo sapiens] 42 0.001 gi|169167808 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002 gi|113417039 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002 gi|113416520 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002 gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 41 0.002 gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 41 0.002 gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 41 0.002 gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo ... 41 0.003 gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo ... 41 0.003 gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens] 41 0.003 >gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo sapiens] Length = 536 Score = 1108 bits (2866), Expect = 0.0 Identities = 536/536 (100%), Positives = 536/536 (100%) Query: 1 MTTASSMSPKPSKYFLSEASVVWYGRPPTKILVNVVSFCEPCMAPGAARGRGKPALGAHG 60 MTTASSMSPKPSKYFLSEASVVWYGRPPTKILVNVVSFCEPCMAPGAARGRGKPALGAHG Sbjct: 1 MTTASSMSPKPSKYFLSEASVVWYGRPPTKILVNVVSFCEPCMAPGAARGRGKPALGAHG 60 Query: 61 AGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAP 120 AGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAP Sbjct: 61 AGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAP 120 Query: 121 DRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEP 180 DRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEP Sbjct: 121 DRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEP 180 Query: 181 RRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRG 240 RRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRG Sbjct: 181 RRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRG 240 Query: 241 LCLPGRGRDRAVEAGDAVAQVRVQSHSFAPRPRAPLAVAPAALQRRESEFTLMRMCREEQ 300 LCLPGRGRDRAVEAGDAVAQVRVQSHSFAPRPRAPLAVAPAALQRRESEFTLMRMCREEQ Sbjct: 241 LCLPGRGRDRAVEAGDAVAQVRVQSHSFAPRPRAPLAVAPAALQRRESEFTLMRMCREEQ 300 Query: 301 ALRGLSFGLSLVQVACTPPACSPAPLNPWEPQVAIFICQVQSIVRCPRIFLMKREVALLY 360 ALRGLSFGLSLVQVACTPPACSPAPLNPWEPQVAIFICQVQSIVRCPRIFLMKREVALLY Sbjct: 301 ALRGLSFGLSLVQVACTPPACSPAPLNPWEPQVAIFICQVQSIVRCPRIFLMKREVALLY 360 Query: 361 SVDRLAGEGKPAANPRAVSCTWRWGSESPSCELHVALGKAEFVSAVAVRVAQAGDPAPTS 420 SVDRLAGEGKPAANPRAVSCTWRWGSESPSCELHVALGKAEFVSAVAVRVAQAGDPAPTS Sbjct: 361 SVDRLAGEGKPAANPRAVSCTWRWGSESPSCELHVALGKAEFVSAVAVRVAQAGDPAPTS 420 Query: 421 AATRRSTLPALGARQPSGAKQNHAWAFHTSQGTLTAKPHRRGPQVGFESLKVTNTSLKVT 480 AATRRSTLPALGARQPSGAKQNHAWAFHTSQGTLTAKPHRRGPQVGFESLKVTNTSLKVT Sbjct: 421 AATRRSTLPALGARQPSGAKQNHAWAFHTSQGTLTAKPHRRGPQVGFESLKVTNTSLKVT 480 Query: 481 CLPPPGICVSHITAGMMLWGTGVLRGPHTAGAKASVFHEETIADIKFETEKSGSHL 536 CLPPPGICVSHITAGMMLWGTGVLRGPHTAGAKASVFHEETIADIKFETEKSGSHL Sbjct: 481 CLPPPGICVSHITAGMMLWGTGVLRGPHTAGAKASVFHEETIADIKFETEKSGSHL 536 >gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sapiens] Length = 2715 Score = 50.4 bits (119), Expect = 4e-06 Identities = 79/265 (29%), Positives = 94/265 (35%), Gaps = 34/265 (12%) Query: 42 CMAPGAARGR--GKPALGAHGAGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGRPSSR 99 C PG+ARGR G+P GA G G GG + R LR G A G+E + Sbjct: 10 CPGPGSARGRFPGRPR-GAGGGG--GRGGRGNGAERVRVALRRGGGATGPGGAEPGEDTA 66 Query: 100 QAR--PLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTR 157 R LRR RR RR G R R R GRG P RG V + Sbjct: 67 LLRLLGLRRGLRRLRR--------LWAGPRVQRGRGRGRGRGWGPSRGCVPEEESSDGES 118 Query: 158 PRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQP 217 Q F + R R RG + G + +P PP A AP P + P Sbjct: 119 DEEEFQGFHSDEDVAPSSLRSALRSQRGRAPRGRGRKHKTTPLP-PPRLADVAPTPPKTP 177 Query: 218 HKGVRPLGCCRG--------GRAQAAGQPRG-LCLP-----GRGRDRAVEAGDA----VA 259 + G R RAQA PR C P RGR AG A Sbjct: 178 ARKRGEEGTERMVQALTELLRRAQAPQAPRSRACEPSTPRRSRGRPPGRPAGPCRRKQQA 237 Query: 260 QVRVQSHSFAPRPRAPLAVAPAALQ 284 V ++ P+P P V P Q Sbjct: 238 VVVAEAAVTIPKPEPPPPVVPVKHQ 262 Score = 33.9 bits (76), Expect = 0.38 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 19/127 (14%) Query: 97 SSRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRG------RRPLRGRVLLR 150 S ++ RP PS+RA R A R P+ G S P P G + L+ Sbjct: 466 SRKRGRPPLTPSQRAEREAARAGPE---GTSPPTPTPSTATGGPPEDSPTVAPKSTTFLK 522 Query: 151 QLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVP---APPGPA 207 + F P + + P R + P+ P +P L+ P +PP P Sbjct: 523 NIRQFIMPVVSARSSRVIKTPRRFMDEDPPK-------PPKVEVSPVLRPPITTSPPVPQ 575 Query: 208 SPAPLPA 214 PAP+P+ Sbjct: 576 EPAPVPS 582 >gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo sapiens] Length = 355 Score = 49.7 bits (117), Expect = 7e-06 Identities = 54/190 (28%), Positives = 65/190 (34%), Gaps = 14/190 (7%) Query: 43 MAPGAARGRGKPALGAHGAGCSSMGGAP----PPTDPGRAGLRSWGAAGSARGSEGRPSS 98 + PG + LG A + G P P G R G RG + Sbjct: 165 LGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGT 224 Query: 99 RQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGR----GRRPLRGRVLLRQLDP 154 A R P+R R + A RC +P R R R PLR L P Sbjct: 225 GSAA--RGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSP 282 Query: 155 FTRPRFPLQFFQGCPQPSRCLGRLE---PRRWRGHGLQPGGARAPGLQVPAPPGPASPAP 211 R R + + Q S R P R R GL+ AR PGL P P +PA Sbjct: 283 SARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAA 342 Query: 212 L-PARQPHKG 220 L P PH G Sbjct: 343 LRPGTSPHPG 352 >gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo sapiens] Length = 355 Score = 49.7 bits (117), Expect = 7e-06 Identities = 54/190 (28%), Positives = 65/190 (34%), Gaps = 14/190 (7%) Query: 43 MAPGAARGRGKPALGAHGAGCSSMGGAP----PPTDPGRAGLRSWGAAGSARGSEGRPSS 98 + PG + LG A + G P P G R G RG + Sbjct: 165 LGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGT 224 Query: 99 RQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGR----GRRPLRGRVLLRQLDP 154 A R P+R R + A RC +P R R R PLR L P Sbjct: 225 GSAA--RGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSP 282 Query: 155 FTRPRFPLQFFQGCPQPSRCLGRLE---PRRWRGHGLQPGGARAPGLQVPAPPGPASPAP 211 R R + + Q S R P R R GL+ AR PGL P P +PA Sbjct: 283 SARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAA 342 Query: 212 L-PARQPHKG 220 L P PH G Sbjct: 343 LRPGTSPHPG 352 >gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo sapiens] Length = 355 Score = 49.7 bits (117), Expect = 7e-06 Identities = 54/190 (28%), Positives = 65/190 (34%), Gaps = 14/190 (7%) Query: 43 MAPGAARGRGKPALGAHGAGCSSMGGAP----PPTDPGRAGLRSWGAAGSARGSEGRPSS 98 + PG + LG A + G P P G R G RG + Sbjct: 165 LGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPLPGTRGRTRAAGT 224 Query: 99 RQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGR----GRRPLRGRVLLRQLDP 154 A R P+R R + A RC +P R R R PLR L P Sbjct: 225 GSAA--RGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSP 282 Query: 155 FTRPRFPLQFFQGCPQPSRCLGRLE---PRRWRGHGLQPGGARAPGLQVPAPPGPASPAP 211 R R + + Q S R P R R GL+ AR PGL P P +PA Sbjct: 283 SARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPGPAPYPLTPAA 342 Query: 212 L-PARQPHKG 220 L P PH G Sbjct: 343 LRPGTSPHPG 352 >gi|116256464 hypothetical protein LOC343990 [Homo sapiens] Length = 962 Score = 49.7 bits (117), Expect = 7e-06 Identities = 49/188 (26%), Positives = 70/188 (37%), Gaps = 12/188 (6%) Query: 41 PCMAPGAARG--RGKPALGAHGAGCSSMGGAP--PPTDPGRAGLRSWGAAGSARGSEGRP 96 P +P A + + +PA + G S A PP +PG L + AA +E Sbjct: 487 PAPSPPAPKSCLKHRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAE 546 Query: 97 SSRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPR-ALGRGRRPLRGRVLLRQLDPF 155 + P R+A R ++ S+ R RPR + R GR+ L + P Sbjct: 547 APPAGAERAAPERKAERGGAELRGAKKFSVSSCRARPRPGVSRPLERASGRLPLARSGPV 606 Query: 156 TRPRFPLQFFQGCPQPS------RCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASP 209 R L QG P+P R L P+ P G R + A PG P Sbjct: 607 WRSEAALDDLQGLPEPQHAKPGPRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREP 666 Query: 210 APLPARQP 217 P A++P Sbjct: 667 CP-AAQEP 673 >gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] Length = 414 Score = 48.5 bits (114), Expect = 2e-05 Identities = 61/201 (30%), Positives = 77/201 (38%), Gaps = 48/201 (23%) Query: 86 AGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGR--RPL 143 +G R EGRP++ R R R SA RP L RG+ +P Sbjct: 6 SGEIRSEEGRPTTES---------RIRPRLAEALSQPTLRHSASALRPPRLSRGKDLKPR 56 Query: 144 RGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRW-RGHGLQPGGA--RAPGLQV 200 GR DP +GC RL RW R L P A APG + Sbjct: 57 CGRGPAHSPDPG----------EGC----EAWRRLSADRWPRPASLSPRAALASAPGQK- 101 Query: 201 PAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQ 260 P PA A LP +P GVRP R G +QA G+P G C +G Sbjct: 102 ---PQPARQAQLP--RPVSGVRPPPRGRVGLSQAPGRPLGACARAKG------------- 143 Query: 261 VRVQSHSFAPRPRAPLAVAPA 281 +R+ + S PRP P+ + A Sbjct: 144 IRLVNPS-PPRPPEPIPASAA 163 Score = 39.3 bits (90), Expect = 0.009 Identities = 67/248 (27%), Positives = 84/248 (33%), Gaps = 40/248 (16%) Query: 54 PALGAHGAGCSSMG---GAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRR 110 PA A +G ++ G A P GR GSA + P +Q + P Sbjct: 159 PASAAVTSGLTARGPNTSATPGPQKGR---------GSAERTNHIPKDKQR--VAAPPPP 207 Query: 111 ARRRAPRCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLD-----PFTRP------- 158 R R P C G S P A GR ++ R R L R P TRP Sbjct: 208 ERPRVPFCRGSS--GLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSS 265 Query: 159 -RFPLQFFQG-----CPQPSRC-----LGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPA 207 PL FF P+P+ LGRL P R G GG P + P P Sbjct: 266 HSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRTLPAPP 325 Query: 208 SPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQVRVQSHS 267 +P PA P R G A G P P R A E G +++ Sbjct: 326 APTAWPAAGAPGAPNPAE-SRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEE 384 Query: 268 FAPRPRAP 275 R ++P Sbjct: 385 TPGRRKSP 392 >gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] Length = 414 Score = 48.5 bits (114), Expect = 2e-05 Identities = 61/201 (30%), Positives = 77/201 (38%), Gaps = 48/201 (23%) Query: 86 AGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGR--RPL 143 +G R EGRP++ R R R SA RP L RG+ +P Sbjct: 6 SGEIRSEEGRPTTES---------RIRPRLAEALSQPTLRHSASALRPPRLSRGKDLKPR 56 Query: 144 RGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRW-RGHGLQPGGA--RAPGLQV 200 GR DP +GC RL RW R L P A APG + Sbjct: 57 CGRGPAHSPDPG----------EGC----EAWRRLSADRWPRPASLSPRAALASAPGQK- 101 Query: 201 PAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQ 260 P PA A LP +P GVRP R G +QA G+P G C +G Sbjct: 102 ---PQPARQAQLP--RPVSGVRPPPRGRVGLSQAPGRPLGACARAKG------------- 143 Query: 261 VRVQSHSFAPRPRAPLAVAPA 281 +R+ + S PRP P+ + A Sbjct: 144 IRLVNPS-PPRPPEPIPASAA 163 Score = 39.3 bits (90), Expect = 0.009 Identities = 67/248 (27%), Positives = 84/248 (33%), Gaps = 40/248 (16%) Query: 54 PALGAHGAGCSSMG---GAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRR 110 PA A +G ++ G A P GR GSA + P +Q + P Sbjct: 159 PASAAVTSGLTARGPNTSATPGPQKGR---------GSAERTNHIPKDKQR--VAAPPPP 207 Query: 111 ARRRAPRCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLD-----PFTRP------- 158 R R P C G S P A GR ++ R R L R P TRP Sbjct: 208 ERPRVPFCRGSS--GLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSS 265 Query: 159 -RFPLQFFQG-----CPQPSRC-----LGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPA 207 PL FF P+P+ LGRL P R G GG P + P P Sbjct: 266 HSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRTLPAPP 325 Query: 208 SPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQVRVQSHS 267 +P PA P R G A G P P R A E G +++ Sbjct: 326 APTAWPAAGAPGAPNPAE-SRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEE 384 Query: 268 FAPRPRAP 275 R ++P Sbjct: 385 TPGRRKSP 392 >gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] Length = 414 Score = 48.5 bits (114), Expect = 2e-05 Identities = 61/201 (30%), Positives = 77/201 (38%), Gaps = 48/201 (23%) Query: 86 AGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGR--RPL 143 +G R EGRP++ R R R SA RP L RG+ +P Sbjct: 6 SGEIRSEEGRPTTES---------RIRPRLAEALSQPTLRHSASALRPPRLSRGKDLKPR 56 Query: 144 RGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRW-RGHGLQPGGA--RAPGLQV 200 GR DP +GC RL RW R L P A APG + Sbjct: 57 CGRGPAHSPDPG----------EGC----EAWRRLSADRWPRPASLSPRAALASAPGQK- 101 Query: 201 PAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQ 260 P PA A LP +P GVRP R G +QA G+P G C +G Sbjct: 102 ---PQPARQAQLP--RPVSGVRPPPRGRVGLSQAPGRPLGACARAKG------------- 143 Query: 261 VRVQSHSFAPRPRAPLAVAPA 281 +R+ + S PRP P+ + A Sbjct: 144 IRLVNPS-PPRPPEPIPASAA 163 Score = 39.3 bits (90), Expect = 0.009 Identities = 67/248 (27%), Positives = 84/248 (33%), Gaps = 40/248 (16%) Query: 54 PALGAHGAGCSSMG---GAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRR 110 PA A +G ++ G A P GR GSA + P +Q + P Sbjct: 159 PASAAVTSGLTARGPNTSATPGPQKGR---------GSAERTNHIPKDKQR--VAAPPPP 207 Query: 111 ARRRAPRCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLD-----PFTRP------- 158 R R P C G S P A GR ++ R R L R P TRP Sbjct: 208 ERPRVPFCRGSS--GLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSS 265 Query: 159 -RFPLQFFQG-----CPQPSRC-----LGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPA 207 PL FF P+P+ LGRL P R G GG P + P P Sbjct: 266 HSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRTLPAPP 325 Query: 208 SPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQVRVQSHS 267 +P PA P R G A G P P R A E G +++ Sbjct: 326 APTAWPAAGAPGAPNPAE-SRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEE 384 Query: 268 FAPRPRAP 275 R ++P Sbjct: 385 TPGRRKSP 392 >gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] Length = 356 Score = 45.4 bits (106), Expect = 1e-04 Identities = 80/289 (27%), Positives = 107/289 (37%), Gaps = 64/289 (22%) Query: 64 SSMGGAP---PPTDPGRAGLRSWGAAGSAR--GSEGRPSSRQARPLRRPSRRARRRAPRC 118 ++ GG P P R GLR+ GS G+E RPSSR++ R R RRR + Sbjct: 61 ANRGGGPVGAPRVSRRREGLRALKVPGSEPQVGAEVRPSSRKSLSDHRGLGRGRRRRRQ- 119 Query: 119 APDRRCGDSAP----RHRPRALGRGRRPL--RGRVLLRQLDPFTRPRFPLQFFQGCPQPS 172 RR G AP R +P + + PL R LL + R +G + Sbjct: 120 --RRRWGTQAPCGRLRAKPALQTQRKEPLVFTQRSLLHSSPRWFSSRHS-SISEG--EGD 174 Query: 173 RCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRA 232 RC G EP PGG+ P +P PP P SP AR+ P G + Sbjct: 175 RC-GFAEP---------PGGSSPPAPPLPPPPKPGSPTQ-RAREASSWKPP------GHS 217 Query: 233 QAAGQPRGLCLPGRGR---DRAVEAGDAVAQVRVQSHSFAPRPRAPLAVA--PAALQRRE 287 A RG P R + + E + + + + +P R P PAAL Sbjct: 218 HTAPPGRGTQRPLTQRHSSESSSELSSSAWPGTIWTSTLSPGQRLPTPPPPDPAAL---- 273 Query: 288 SEFTLMRMCREEQALRGLSFGLSLVQVACTPPACSPA----PLNPWEPQ 332 S+GL Q AC P + A + PWE Q Sbjct: 274 -----------------TSWGLPQQQGACVPEGIALALRCRAMGPWEEQ 305 >gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo sapiens] Length = 384 Score = 44.3 bits (103), Expect = 3e-04 Identities = 69/252 (27%), Positives = 86/252 (34%), Gaps = 61/252 (24%) Query: 51 RGKPALGAHGAGCSSMGGAPPP--------TDPGRAGLRSWGAAGSARGSE---GRPS-- 97 R +PA GCSS +P P T PGRA G +GS+ RPS Sbjct: 118 RLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRA 177 Query: 98 ----------------SRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRR 141 R ARP RRP + R R CG G G Sbjct: 178 GGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCG---------TWGSGGG 228 Query: 142 PLRGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVP 201 P D + P+ F G + C GR RR G G QPG L P Sbjct: 229 PGTAAASSPSADFSSDSPQPIIIFGGALRVRGCGGR---RRSNGQGTQPGCR----LLSP 281 Query: 202 APPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQV 261 APP R+ ++ +PL GG + P + P R R+V A Sbjct: 282 APP----------RRRYR--KPLTLSFGGGVSSPTHP--VVAPRRHFPRSVPR--FPAGF 325 Query: 262 RVQSHSFAPRPR 273 R S AP+P+ Sbjct: 326 RTHSLGTAPKPK 337 >gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo sapiens] Length = 384 Score = 44.3 bits (103), Expect = 3e-04 Identities = 69/252 (27%), Positives = 86/252 (34%), Gaps = 61/252 (24%) Query: 51 RGKPALGAHGAGCSSMGGAPPP--------TDPGRAGLRSWGAAGSARGSE---GRPS-- 97 R +PA GCSS +P P T PGRA G +GS+ RPS Sbjct: 118 RLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRA 177 Query: 98 ----------------SRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRR 141 R ARP RRP + R R CG G G Sbjct: 178 GGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCG---------TWGSGGG 228 Query: 142 PLRGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVP 201 P D + P+ F G + C GR RR G G QPG L P Sbjct: 229 PGTAAASSPSADFSSDSPQPIIIFGGALRVRGCGGR---RRSNGQGTQPGCR----LLSP 281 Query: 202 APPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQV 261 APP R+ ++ +PL GG + P + P R R+V A Sbjct: 282 APP----------RRRYR--KPLTLSFGGGVSSPTHP--VVAPRRHFPRSVPR--FPAGF 325 Query: 262 RVQSHSFAPRPR 273 R S AP+P+ Sbjct: 326 RTHSLGTAPKPK 337 >gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] Length = 384 Score = 44.3 bits (103), Expect = 3e-04 Identities = 69/252 (27%), Positives = 86/252 (34%), Gaps = 61/252 (24%) Query: 51 RGKPALGAHGAGCSSMGGAPPP--------TDPGRAGLRSWGAAGSARGSE---GRPS-- 97 R +PA GCSS +P P T PGRA G +GS+ RPS Sbjct: 118 RLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRA 177 Query: 98 ----------------SRQARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRR 141 R ARP RRP + R R CG G G Sbjct: 178 GGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCG---------TWGSGGG 228 Query: 142 PLRGRVLLRQLDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVP 201 P D + P+ F G + C GR RR G G QPG L P Sbjct: 229 PGTAAASSPSADFSSDSPQPIIIFGGALRVRGCGGR---RRSNGQGTQPGCR----LLSP 281 Query: 202 APPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQV 261 APP R+ ++ +PL GG + P + P R R+V A Sbjct: 282 APP----------RRRYR--KPLTLSFGGGVSSPTHP--VVAPRRHFPRSVPR--FPAGF 325 Query: 262 RVQSHSFAPRPR 273 R S AP+P+ Sbjct: 326 RTHSLGTAPKPK 337 >gi|239756278 PREDICTED: hypothetical protein XP_002344871 [Homo sapiens] Length = 238 Score = 43.1 bits (100), Expect = 6e-04 Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 12/109 (11%) Query: 41 PCMAPGAARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGL-RSWGAAGSARGSEGRPSSR 99 P M+ G A G PA A G + G +PPP + GRAG RS G AG+A GS +S Sbjct: 96 PVMSHGEA---GTPAPRAARLG-APRGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSP 151 Query: 100 QARPLRRPSRRARRR---APRCAP---DRRCGDSAP-RHRPRALGRGRR 141 P RR R AR R P P ++ S P RP L G+R Sbjct: 152 TPAPGRRGGREARLRPMPTPSWIPVSSHKKAARSEPAERRPSLLQGGQR 200 >gi|239750809 PREDICTED: hypothetical protein XP_002347567 [Homo sapiens] Length = 238 Score = 43.1 bits (100), Expect = 6e-04 Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 12/109 (11%) Query: 41 PCMAPGAARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGL-RSWGAAGSARGSEGRPSSR 99 P M+ G A G PA A G + G +PPP + GRAG RS G AG+A GS +S Sbjct: 96 PVMSHGEA---GTPAPRAARLG-APRGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSP 151 Query: 100 QARPLRRPSRRARRR---APRCAP---DRRCGDSAP-RHRPRALGRGRR 141 P RR R AR R P P ++ S P RP L G+R Sbjct: 152 TPAPGRRGGREARLRPMPTPSWIPVSSHKKAARSEPAERRPSLLQGGQR 200 >gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens] Length = 816 Score = 43.1 bits (100), Expect = 6e-04 Identities = 64/239 (26%), Positives = 89/239 (37%), Gaps = 24/239 (10%) Query: 48 ARGRGK--PALGAHGAGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLR 105 ARG+ P A AG P P P A R AAG+ G RP+ ARP Sbjct: 134 ARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLP-RPAP-SARP-- 189 Query: 106 RPSRRARRRAPRCAPDRRCGDSAP--RHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQ 163 RP R++ A + + +P R RP A G +RP R L P + P Sbjct: 190 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP-ASRSLSSSATPLSSPARSGP 248 Query: 164 FFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRP 223 +G P+ + +P+ + L+P P GP S +PL P P Sbjct: 249 SARGTPRAPAHPSQPKPKGLQ--ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSP 306 Query: 224 LGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQVRVQ-SHSFAPR-PRAPLAVAP 280 + P LP +A ++ +Q +HSF P P +PLA P Sbjct: 307 -----------SAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPP 354 Score = 32.0 bits (71), Expect = 1.5 Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Query: 185 GHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCC----RGGRAQAAGQPRG 240 G + ARAPGL P PPG SP P P P +R LG R A+ AG G Sbjct: 11 GAAARTPAARAPGLLTPRPPG--SPRPPPPVTP-AALRVLGAAGAVGRKPLAERAGGIGG 67 Query: 241 LCLP 244 +P Sbjct: 68 ATIP 71 >gi|239745169 PREDICTED: hypothetical protein XP_002343388 [Homo sapiens] Length = 238 Score = 43.1 bits (100), Expect = 6e-04 Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 12/109 (11%) Query: 41 PCMAPGAARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGL-RSWGAAGSARGSEGRPSSR 99 P M+ G A G PA A G + G +PPP + GRAG RS G AG+A GS +S Sbjct: 96 PVMSHGEA---GTPAPRAARLG-APRGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSP 151 Query: 100 QARPLRRPSRRARRR---APRCAP---DRRCGDSAP-RHRPRALGRGRR 141 P RR R AR R P P ++ S P RP L G+R Sbjct: 152 TPAPGRRGGREARLRPMPTPSWIPVSSHKKAARSEPAERRPSLLQGGQR 200 >gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo sapiens] Length = 321 Score = 42.0 bits (97), Expect = 0.001 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Query: 78 AGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAP--DRRCGDSAPRHRPRA 135 + LR+ + G + G + P R+ RP R + R+PRC P R+ G R A Sbjct: 243 SALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARGAA 302 Query: 136 LGRGRRPLRGRVLLRQ 151 LG R L GR LLR+ Sbjct: 303 LGGAFRVLAGRALLRR 318 >gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo sapiens] Length = 321 Score = 42.0 bits (97), Expect = 0.001 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Query: 78 AGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRARRRAPRCAP--DRRCGDSAPRHRPRA 135 + LR+ + G + G + P R+ RP R + R+PRC P R+ G R A Sbjct: 243 SALRAALSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARGAA 302 Query: 136 LGRGRRPLRGRVLLRQ 151 LG R L GR LLR+ Sbjct: 303 LGGAFRVLAGRALLRR 318 >gi|158854042 hypothetical protein LOC222183 [Homo sapiens] Length = 653 Score = 42.0 bits (97), Expect = 0.001 Identities = 70/249 (28%), Positives = 87/249 (34%), Gaps = 61/249 (24%) Query: 45 PGAARGR-GKPALGAHGAGCSSMGGAPPPTDPG------RAGLRSWGAAGSARGSEGRPS 97 PG+A KP+ + + AP P G R+ S G G A G GR Sbjct: 328 PGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRR 387 Query: 98 SRQARPLRRPS-----RRARRRAPRCAPDRRCGDSAPRHRPRA-LGRGRRPLRGRVLLRQ 151 R+ R R S RR RR PR AP R S R R + G GR Sbjct: 388 RRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGR----------- 436 Query: 152 LDPFTRPRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAP 211 G P P EP RGHG G RA + P PAS +P Sbjct: 437 ---------------GAPGPGP-----EPGSERGHG--GHGKRAK--ERPPRARPASTSP 472 Query: 212 LPARQPHKGVRPLGCCRGGRAQAAGQPRGLC---LPGRGRDRAVEAGDAVAQVRVQSHSF 268 P +G P G + PR P + R R+ A+ R S S Sbjct: 473 SPGAHGRRG-GPEG--KSSSRSPGPHPRSWSSSRSPSKSRSRS-------AEKRPHSPSR 522 Query: 269 APRPRAPLA 277 +P P+ PL+ Sbjct: 523 SPSPKKPLS 531 Score = 32.0 bits (71), Expect = 1.5 Identities = 44/167 (26%), Positives = 58/167 (34%), Gaps = 16/167 (9%) Query: 108 SRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQG 167 SRR RR R + +R + + RP GRR R P + Sbjct: 218 SRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHR-----HSSGSSHSPSLSSHY--- 269 Query: 168 CPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCC 227 SR RL P+ R G + G R+ G + P+P G S P R G R Sbjct: 270 --SDSRSPSRLSPKH-RDEGRKTGSQRSSGSRSPSPSG-GSGWGSPQRNGGSGQR--SGA 323 Query: 228 RGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQVRVQSHSFAPRPRA 274 GGR +A P P R + A A +P PR+ Sbjct: 324 HGGRPGSAHSPPD--KPSSPSPRVRDKAAAAAPTPPARGKESPSPRS 368 >gi|22027568 alpha 1 type XIII collagen isoform 2 [Homo sapiens] Length = 705 Score = 42.0 bits (97), Expect = 0.001 Identities = 62/220 (28%), Positives = 79/220 (35%), Gaps = 23/220 (10%) Query: 42 CMAPGAARG-RGKPAL-GAHG-AGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGRPSS 98 C P A +G G+P L G+ G AG S +G PP PG G + G G P Sbjct: 117 CNCPPAFQGPTGRPGLPGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGP 176 Query: 99 RQARPLRRP-----SRRARRRAPRCA--PDRRCGDSAPR--HRPRALGRGRRPLRGRVLL 149 + L P + + +C P R C S P + + PL V L Sbjct: 177 KGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRL 236 Query: 150 RQLDPFTRPRFPLQ----FFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPG 205 R F + QG P P G P GH PG PGL P PPG Sbjct: 237 APPPVIKRRTFQGEQSQASIQGPPGPP---GPPGPSGPLGHPGLPGPMGPPGL--PGPPG 291 Query: 206 PASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPG 245 P + KG R + G+ A G P G+ + G Sbjct: 292 PKGDPGIQGYHGRKGERGMP-GMPGKHGAKGAP-GIAVAG 329 >gi|169167808 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 41.6 bits (96), Expect = 0.002 Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 9/92 (9%) Query: 37 SFCEPCMAPGA-ARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGR 95 S E A GA R G+ G G G S G P+ PG G G A S G GR Sbjct: 50 SRAESSAARGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGR 109 Query: 96 PSSRQARPLRRP--------SRRARRRAPRCA 119 + + R RP +RR R RAPR A Sbjct: 110 AGTGEKRKWERPGKETWKPKTRRPRLRAPRAA 141 Score = 31.2 bits (69), Expect = 2.5 Identities = 50/185 (27%), Positives = 61/185 (32%), Gaps = 43/185 (23%) Query: 62 GCSSMG------GAPPPTDPGRAGLRSWGAAGSARGSEG----RPSSRQARPLRRPSRRA 111 GC +G GA P P RA R GA+ + G G R +R +R A Sbjct: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQ-GASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60 Query: 112 RRRAP----RCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQG 167 R RAP R P R +A P G G R G Sbjct: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGG--------------------GA 100 Query: 168 CPQPSRC--LGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLG 225 QP C G E R+W G + P + P P + LP + H P G Sbjct: 101 ASQPGLCGRAGTGEKRKWERPGKE---TWKPKTRRPRLRAPRAALLLPRPRTH---GPAG 154 Query: 226 CCRGG 230 RGG Sbjct: 155 GTRGG 159 Score = 29.3 bits (64), Expect = 9.5 Identities = 31/119 (26%), Positives = 40/119 (33%), Gaps = 16/119 (13%) Query: 180 PRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPR 239 PR + G G G+ P G S A A + + P CRGG + Sbjct: 22 PRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYESAA 81 Query: 240 GLCLP----GRGRDRAVEA------------GDAVAQVRVQSHSFAPRPRAPLAVAPAA 282 G LP G GRD A G+ R ++ P+ R P AP A Sbjct: 82 GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLRAPRA 140 >gi|113417039 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 41.6 bits (96), Expect = 0.002 Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 9/92 (9%) Query: 37 SFCEPCMAPGA-ARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGR 95 S E A GA R G+ G G G S G P+ PG G G A S G GR Sbjct: 50 SRAESSAARGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGR 109 Query: 96 PSSRQARPLRRP--------SRRARRRAPRCA 119 + + R RP +RR R RAPR A Sbjct: 110 AGTGEKRKWERPGKETWKPKTRRPRLRAPRAA 141 Score = 31.2 bits (69), Expect = 2.5 Identities = 50/185 (27%), Positives = 61/185 (32%), Gaps = 43/185 (23%) Query: 62 GCSSMG------GAPPPTDPGRAGLRSWGAAGSARGSEG----RPSSRQARPLRRPSRRA 111 GC +G GA P P RA R GA+ + G G R +R +R A Sbjct: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQ-GASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60 Query: 112 RRRAP----RCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQG 167 R RAP R P R +A P G G R G Sbjct: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGG--------------------GA 100 Query: 168 CPQPSRC--LGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLG 225 QP C G E R+W G + P + P P + LP + H P G Sbjct: 101 ASQPGLCGRAGTGEKRKWERPGKE---TWKPKTRRPRLRAPRAALLLPRPRTH---GPAG 154 Query: 226 CCRGG 230 RGG Sbjct: 155 GTRGG 159 Score = 29.3 bits (64), Expect = 9.5 Identities = 31/119 (26%), Positives = 40/119 (33%), Gaps = 16/119 (13%) Query: 180 PRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPR 239 PR + G G G+ P G S A A + + P CRGG + Sbjct: 22 PRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYESAA 81 Query: 240 GLCLP----GRGRDRAVEA------------GDAVAQVRVQSHSFAPRPRAPLAVAPAA 282 G LP G GRD A G+ R ++ P+ R P AP A Sbjct: 82 GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLRAPRA 140 >gi|113416520 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 41.6 bits (96), Expect = 0.002 Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 9/92 (9%) Query: 37 SFCEPCMAPGA-ARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGLRSWGAAGSARGSEGR 95 S E A GA R G+ G G G S G P+ PG G G A S G GR Sbjct: 50 SRAESSAARGARVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGGGAASQPGLCGR 109 Query: 96 PSSRQARPLRRP--------SRRARRRAPRCA 119 + + R RP +RR R RAPR A Sbjct: 110 AGTGEKRKWERPGKETWKPKTRRPRLRAPRAA 141 Score = 31.2 bits (69), Expect = 2.5 Identities = 50/185 (27%), Positives = 61/185 (32%), Gaps = 43/185 (23%) Query: 62 GCSSMG------GAPPPTDPGRAGLRSWGAAGSARGSEG----RPSSRQARPLRRPSRRA 111 GC +G GA P P RA R GA+ + G G R +R +R A Sbjct: 2 GCEVVGFFPAQHGARPSEKPPRAAQRQ-GASRAGTGGSGVLTPRAKGSTSRAESSAARGA 60 Query: 112 RRRAP----RCAPDRRCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFPLQFFQG 167 R RAP R P R +A P G G R G Sbjct: 61 RVRAPGRTCRGGPGRGYESAAGNSLPSVPGGGGRDPGG--------------------GA 100 Query: 168 CPQPSRC--LGRLEPRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLG 225 QP C G E R+W G + P + P P + LP + H P G Sbjct: 101 ASQPGLCGRAGTGEKRKWERPGKE---TWKPKTRRPRLRAPRAALLLPRPRTH---GPAG 154 Query: 226 CCRGG 230 RGG Sbjct: 155 GTRGG 159 Score = 29.3 bits (64), Expect = 9.5 Identities = 31/119 (26%), Positives = 40/119 (33%), Gaps = 16/119 (13%) Query: 180 PRRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPR 239 PR + G G G+ P G S A A + + P CRGG + Sbjct: 22 PRAAQRQGASRAGTGGSGVLTPRAKGSTSRAESSAARGARVRAPGRTCRGGPGRGYESAA 81 Query: 240 GLCLP----GRGRDRAVEA------------GDAVAQVRVQSHSFAPRPRAPLAVAPAA 282 G LP G GRD A G+ R ++ P+ R P AP A Sbjct: 82 GNSLPSVPGGGGRDPGGGAASQPGLCGRAGTGEKRKWERPGKETWKPKTRRPRLRAPRA 140 >gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo sapiens] Length = 1691 Score = 41.2 bits (95), Expect = 0.002 Identities = 63/235 (26%), Positives = 78/235 (33%), Gaps = 23/235 (9%) Query: 45 PGAARGRGKPALGAHGA----GCSSMGGAP-PPTDPGRAGLRSWGAAGSARGSEGRPSSR 99 PG+ G P +G G G + G P P PGR GL G +G P Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFA 754 Query: 100 QARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRRP-LRGRVLLR-QLDPFTR 157 P P + A DR G P P G P +G V Q P Sbjct: 755 LPGPPGPPGLPGFKGALGPKGDR--GFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGP 812 Query: 158 PRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPG-------PASPA 210 P P QG P P G + G + G PGL VP PPG P +P Sbjct: 813 PGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPG 872 Query: 211 PL-----PARQPHKGVRPLGCCRG--GRAQAAGQPRGLCLPGRGRDRAVEAGDAV 258 P+ P G +G G G P L +PGR ++ D + Sbjct: 873 PIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGL 927 Score = 34.3 bits (77), Expect = 0.29 Identities = 17/41 (41%), Positives = 19/41 (46%) Query: 67 GGAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRP 107 G PP DPGR GL + AG +G G P R L P Sbjct: 1406 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP 1446 >gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sapiens] Length = 1685 Score = 41.2 bits (95), Expect = 0.002 Identities = 63/235 (26%), Positives = 78/235 (33%), Gaps = 23/235 (9%) Query: 45 PGAARGRGKPALGAHGA----GCSSMGGAP-PPTDPGRAGLRSWGAAGSARGSEGRPSSR 99 PG+ G P +G G G + G P P PGR GL G +G P Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFA 754 Query: 100 QARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRRP-LRGRVLLR-QLDPFTR 157 P P + A DR G P P G P +G V Q P Sbjct: 755 LPGPPGPPGLPGFKGALGPKGDR--GFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGP 812 Query: 158 PRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPG-------PASPA 210 P P QG P P G + G + G PGL VP PPG P +P Sbjct: 813 PGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPG 872 Query: 211 PL-----PARQPHKGVRPLGCCRG--GRAQAAGQPRGLCLPGRGRDRAVEAGDAV 258 P+ P G +G G G P L +PGR ++ D + Sbjct: 873 PIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGL 927 Score = 34.3 bits (77), Expect = 0.29 Identities = 17/41 (41%), Positives = 19/41 (46%) Query: 67 GGAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRP 107 G PP DPGR GL + AG +G G P R L P Sbjct: 1400 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP 1440 >gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo sapiens] Length = 1688 Score = 41.2 bits (95), Expect = 0.002 Identities = 63/235 (26%), Positives = 78/235 (33%), Gaps = 23/235 (9%) Query: 45 PGAARGRGKPALGAHGA----GCSSMGGAP-PPTDPGRAGLRSWGAAGSARGSEGRPSSR 99 PG+ G P +G G G + G P P PGR GL G +G P Sbjct: 695 PGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFA 754 Query: 100 QARPLRRPSRRARRRAPRCAPDRRCGDSAPRHRPRALGRGRRP-LRGRVLLR-QLDPFTR 157 P P + A DR G P P G P +G V Q P Sbjct: 755 LPGPPGPPGLPGFKGALGPKGDR--GFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGP 812 Query: 158 PRFPLQFFQGCPQPSRCLGRLEPRRWRGHGLQPGGARAPGLQVPAPPG-------PASPA 210 P P QG P P G + G + G PGL VP PPG P +P Sbjct: 813 PGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPG 872 Query: 211 PL-----PARQPHKGVRPLGCCRG--GRAQAAGQPRGLCLPGRGRDRAVEAGDAV 258 P+ P G +G G G P L +PGR ++ D + Sbjct: 873 PIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGL 927 Score = 34.3 bits (77), Expect = 0.29 Identities = 17/41 (41%), Positives = 19/41 (46%) Query: 67 GGAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRP 107 G PP DPGR GL + AG +G G P R L P Sbjct: 1403 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP 1443 >gi|239756550 PREDICTED: hypothetical protein XP_002344932 [Homo sapiens] Length = 177 Score = 40.8 bits (94), Expect = 0.003 Identities = 30/73 (41%), Positives = 32/73 (43%), Gaps = 5/73 (6%) Query: 69 APPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRA---RRRAPRCAPDRRCG 125 APP PG A R G GS P+ +ARPL P R A RRR D R G Sbjct: 85 APPRPVPGAARWR--GRPEPRPGSPAGPAPTRARPLGAPGRSAPPARRRERELGTDARVG 142 Query: 126 DSAPRHRPRALGR 138 D RP A GR Sbjct: 143 DGERELRPDARGR 155 Score = 30.0 bits (66), Expect = 5.5 Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 22/95 (23%) Query: 136 LGRGRRPLRGRVLLRQLDPFTRPR-------FPLQFF--------QGCPQPSRCLGRLEP 180 LG G P RGR+ L RP PL+ P+P C R P Sbjct: 29 LGPGPSPRRGRLPSGGLRLRARPGRRALGLPSPLELAAPSLVPNASASPRPVSCR-RAPP 87 Query: 181 RRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPAR 215 R PG AR G P P PA PAP AR Sbjct: 88 RP------VPGAARWRGRPEPRPGSPAGPAPTRAR 116 >gi|239745514 PREDICTED: hypothetical protein XP_002343509 [Homo sapiens] Length = 177 Score = 40.8 bits (94), Expect = 0.003 Identities = 30/73 (41%), Positives = 32/73 (43%), Gaps = 5/73 (6%) Query: 69 APPPTDPGRAGLRSWGAAGSARGSEGRPSSRQARPLRRPSRRA---RRRAPRCAPDRRCG 125 APP PG A R G GS P+ +ARPL P R A RRR D R G Sbjct: 85 APPRPVPGAARWR--GRPEPRPGSPAGPAPTRARPLGAPGRSAPPARRRERELGTDARVG 142 Query: 126 DSAPRHRPRALGR 138 D RP A GR Sbjct: 143 DGERELRPDARGR 155 Score = 30.0 bits (66), Expect = 5.5 Identities = 32/95 (33%), Positives = 35/95 (36%), Gaps = 22/95 (23%) Query: 136 LGRGRRPLRGRVLLRQLDPFTRPR-------FPLQFF--------QGCPQPSRCLGRLEP 180 LG G P RGR+ L RP PL+ P+P C R P Sbjct: 29 LGPGPSPRRGRLPSGGLRLRARPGRRALGLPSPLELAAPSLVPNASASPRPVSCR-RAPP 87 Query: 181 RRWRGHGLQPGGARAPGLQVPAPPGPASPAPLPAR 215 R PG AR G P P PA PAP AR Sbjct: 88 RP------VPGAARWRGRPEPRPGSPAGPAPTRAR 116 >gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens] Length = 234 Score = 40.8 bits (94), Expect = 0.003 Identities = 26/65 (40%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 40 EPCMAPGAARGRGKPALGAHGAGCSSMGGAPPPTDPGRAGL---RSWGAAGSARGSEGRP 96 EP ARG A A G C +G AP PT PGR G +WG A G G P Sbjct: 5 EPACTMDQARGLDDAA--ARGGQCPGLGPAPTPTPPGRLGAPYSEAWGYFHLAPGRPGHP 62 Query: 97 SSRQA 101 S A Sbjct: 63 SGHWA 67 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.135 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,608,543 Number of Sequences: 37866 Number of extensions: 1653376 Number of successful extensions: 14441 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 909 Number of HSP's that attempted gapping in prelim test: 11365 Number of HSP's gapped (non-prelim): 3347 length of query: 536 length of database: 18,247,518 effective HSP length: 107 effective length of query: 429 effective length of database: 14,195,856 effective search space: 6090022224 effective search space used: 6090022224 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.