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Search of human proteins with 239746055
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239746055 PREDICTED: hypothetical protein [Homo sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757026 PREDICTED: hypothetical protein [Homo sapiens] 302 7e-83
gi|239746055 PREDICTED: hypothetical protein [Homo sapiens] 302 7e-83
gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo ... 37 0.007
gi|239756691 PREDICTED: hypothetical protein [Homo sapiens] 33 0.060
gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo ... 33 0.060
gi|239757751 PREDICTED: hypothetical protein [Homo sapiens] 32 0.13
gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo ... 32 0.13
gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo ... 32 0.13
gi|124248531 hypothetical protein LOC441476 [Homo sapiens] 30 0.50
gi|110227624 pre T-cell antigen receptor alpha [Homo sapiens] 27 4.3
gi|22749387 zinc finger, CCHC domain containing 5 [Homo sapiens] 27 4.3
gi|239754558 PREDICTED: similar to hCG1779533 [Homo sapiens] 27 5.6
gi|169168105 PREDICTED: hypothetical protein [Homo sapiens] 27 5.6
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 27 5.6
gi|239740972 PREDICTED: hypothetical protein [Homo sapiens] 27 5.6
gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens] 27 5.6
gi|19111150 angiomotin isoform 2 [Homo sapiens] 27 5.6
gi|166064029 angiomotin isoform 1 [Homo sapiens] 27 5.6
gi|46409340 ankyrin repeat domain 13 family, member D [Homo sapi... 27 5.6
gi|239757244 PREDICTED: hypothetical protein [Homo sapiens] 27 7.3
gi|169184513 PREDICTED: chromosome 10 open reading frame 105 [Ho... 27 7.3
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens] 27 7.3
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ... 27 7.3
gi|239749818 PREDICTED: chromosome 10 open reading frame 105 [Ho... 27 7.3
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ... 27 7.3
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ... 27 7.3
gi|239744108 PREDICTED: chromosome 10 open reading frame 105 [Ho... 27 7.3
gi|169167523 PREDICTED: hypothetical protein [Homo sapiens] 27 7.3
gi|38016937 lemur tyrosine kinase 2 [Homo sapiens] 27 7.3
gi|154448886 proline rich 4 (lacrimal) isoform 2 [Homo sapiens] 27 7.3
>gi|239757026 PREDICTED: hypothetical protein [Homo sapiens]
Length = 141
Score = 302 bits (773), Expect = 7e-83
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL 60
MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL
Sbjct: 1 MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL 60
Query: 61 AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA 120
AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA
Sbjct: 61 AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA 120
Query: 121 CLRLPTSPWNGYLFGALQSIL 141
CLRLPTSPWNGYLFGALQSIL
Sbjct: 121 CLRLPTSPWNGYLFGALQSIL 141
>gi|239746055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 141
Score = 302 bits (773), Expect = 7e-83
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL 60
MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL
Sbjct: 1 MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL 60
Query: 61 AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA 120
AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA
Sbjct: 61 AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA 120
Query: 121 CLRLPTSPWNGYLFGALQSIL 141
CLRLPTSPWNGYLFGALQSIL
Sbjct: 121 CLRLPTSPWNGYLFGALQSIL 141
>gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo
sapiens]
Length = 319
Score = 36.6 bits (83), Expect = 0.007
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 31 PSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQ---------VSG-PATARWA 80
PSRR+ Q P PH L H EQE +LQ ++G T W
Sbjct: 20 PSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWR 79
Query: 81 QTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACLRLPTS 127
+ SR PG + G R +RS +H G PP+ L L S
Sbjct: 80 RESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGS 126
>gi|239756691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 33.5 bits (75), Expect = 0.060
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 10/107 (9%)
Query: 31 PSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQ---------VSG-PATARWA 80
PSRR+ Q P PH L H EQE +LQ ++G T W
Sbjct: 20 PSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWR 79
Query: 81 QTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACLRLPTS 127
+ SR PG + R +RS +H G PP+ L L S
Sbjct: 80 RESREAEPGSGKTNAAWRWRGKRSDGGQTHQPQGPRPPSEALALEGS 126
>gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo
sapiens]
Length = 319
Score = 33.5 bits (75), Expect = 0.060
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 10/107 (9%)
Query: 31 PSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQ---------VSG-PATARWA 80
PSRR+ Q P PH L H EQE +LQ ++G T W
Sbjct: 20 PSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWR 79
Query: 81 QTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACLRLPTS 127
+ SR PG + R +RS +H G PP+ L L S
Sbjct: 80 RESREAEPGSGKTNAAWRWRGKRSDGGQTHQPQGPRPPSEALALEGS 126
>gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 327
Score = 32.3 bits (72), Expect = 0.13
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 20/120 (16%)
Query: 24 PAPAAARPSRRRAHTQRTP----CTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARW 79
P P PS R R P P TLAP L Q P Q SG ++
Sbjct: 163 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSS-- 220
Query: 80 AQTSRFPF----PGFSLGDDDEGRRNQRSPVWGSHH---------YSGYPPPAACLRLPT 126
Q FP F G + R+P+ GS + + YPP AACL LPT
Sbjct: 221 -QLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPT 279
>gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo
sapiens]
Length = 264
Score = 32.3 bits (72), Expect = 0.13
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 20/120 (16%)
Query: 24 PAPAAARPSRRRAHTQRTP----CTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARW 79
P P PS R R P P TLAP L Q P Q SG ++
Sbjct: 100 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSS-- 157
Query: 80 AQTSRFPF----PGFSLGDDDEGRRNQRSPVWGSHH---------YSGYPPPAACLRLPT 126
Q FP F G + R+P+ GS + + YPP AACL LPT
Sbjct: 158 -QLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPT 216
>gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo
sapiens]
Length = 264
Score = 32.3 bits (72), Expect = 0.13
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 20/120 (16%)
Query: 24 PAPAAARPSRRRAHTQRTP----CTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARW 79
P P PS R R P P TLAP L Q P Q SG ++
Sbjct: 100 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSS-- 157
Query: 80 AQTSRFPF----PGFSLGDDDEGRRNQRSPVWGSHH---------YSGYPPPAACLRLPT 126
Q FP F G + R+P+ GS + + YPP AACL LPT
Sbjct: 158 -QLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPT 216
>gi|124248531 hypothetical protein LOC441476 [Homo sapiens]
Length = 308
Score = 30.4 bits (67), Expect = 0.50
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 44 TPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARWAQTS-----RFPFPGFSLGDDDEG 98
TP P T T L EQ PL + P+ R+ S P P +S+G +G
Sbjct: 74 TPQESLPTYTQTLRELLLEQRPLITADLEVPSPTRYQVPSPSVRESSPHPHYSIGCKHQG 133
Query: 99 RRNQRSPVWGSHHYSGYPP 117
R W + + P
Sbjct: 134 REGGGRRAWQTLWFQSESP 152
>gi|110227624 pre T-cell antigen receptor alpha [Homo sapiens]
Length = 281
Score = 27.3 bits (59), Expect = 4.3
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 11/75 (14%)
Query: 74 PAT---ARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHY-SGYPP-PA------ACL 122
PAT R A +S P P D R SPVWG Y S YP PA + L
Sbjct: 198 PATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLSSYPTCPAQAWCSRSAL 257
Query: 123 RLPTSPWNGYLFGAL 137
R P+S + G L
Sbjct: 258 RAPSSSLGAFFAGDL 272
>gi|22749387 zinc finger, CCHC domain containing 5 [Homo sapiens]
Length = 475
Score = 27.3 bits (59), Expect = 4.3
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 7 WSDLTLEKFKEGKLVQIPAPAAARPSRRRA--HTQRTPCTPHTLAPLLTHTHTLSLAEQE 64
W +FKE + + P P P A Q P P +LAP T E
Sbjct: 74 WEAQKTPEFKEPQ--KPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHE 131
Query: 65 PLTILQVSGPATARWAQTSRFP 86
T+L+ GPA + A ++ P
Sbjct: 132 IPTVLEGQGPANTQDATIAQEP 153
>gi|239754558 PREDICTED: similar to hCG1779533 [Homo sapiens]
Length = 212
Score = 26.9 bits (58), Expect = 5.6
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 42 PCTPHTL-APLLTHTHTLSLAEQEPLTI-----LQVSGPATARWAQTSRF-PFPGFSLGD 94
P HT A L H T+ P ++ P T F P P +
Sbjct: 2 PAEAHTFGAKWLLHLTTMKTGLLPPSSLSRPRTFSSQPPQTKLMTHNGLFRPIPYLTAVS 61
Query: 95 DDEGRRNQRSPVWGSHHYSGYPPPAACL 122
DE +Q+ P H Y+G P++CL
Sbjct: 62 ADEATASQQPPQAQLHRYNGLFRPSSCL 89
>gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 26.9 bits (58), Expect = 5.6
Identities = 34/129 (26%), Positives = 42/129 (32%), Gaps = 19/129 (14%)
Query: 5 WGWSDLTLEKFKEGKLVQIPAPAAARPSRRR--AHTQRTPCTPHTLAPLLTHTHTLSLAE 62
WG + TLE + + P A RRR A P P T A T
Sbjct: 22 WGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTR------ 75
Query: 63 QEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACL 122
P T RW + + FP G +G+R + GS P AA
Sbjct: 76 -----------PFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVAAADG 124
Query: 123 RLPTSPWNG 131
RL W G
Sbjct: 125 RLKLQLWRG 133
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 26.9 bits (58), Expect = 5.6
Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 36 AHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDD 95
A T TP T P+ T T T S+ E T S P+T +T S+
Sbjct: 152 AFTSSYTSTPVTQKPVTTVTSTYSMTTTEKGTSAMTSSPSTTTARETPIVTVTPSSVSAT 211
Query: 96 D---------EGRRNQRSPV-WGSHHYSGYPPP 118
D R +R+P+ GS H + P P
Sbjct: 212 DTTFHTTISSTTRTTERTPLPTGSIHTTTSPTP 244
>gi|239740972 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 26.9 bits (58), Expect = 5.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 86 PFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACL 122
P P + DE +Q+ P H Y+G P++CL
Sbjct: 32 PIPYVTAASADEATASQQPPQAQLHRYNGLFRPSSCL 68
>gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens]
Length = 596
Score = 26.9 bits (58), Expect = 5.6
Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 36 AHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDD 95
A T TP T P+ T T T S+ E T S P+T +T S+
Sbjct: 152 AFTSSYTSTPVTQKPVTTVTSTYSMTTTEKGTSAMTSSPSTTTARETPIVTVTPSSVSAT 211
Query: 96 D---------EGRRNQRSPV-WGSHHYSGYPPP 118
D R +R+P+ GS H + P P
Sbjct: 212 DTTFHTTISSTTRTTERTPLPTGSIHTTTSPTP 244
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 26.9 bits (58), Expect = 5.6
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 20 LVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQE 64
LV +PAPAAA+ S A TQ P + +AP T T ++A+ E
Sbjct: 575 LVPVPAPAAAQAS-APAQTQ-APTSAPAVAPTPAPTPTPAVAQAE 617
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 26.9 bits (58), Expect = 5.6
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 20 LVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQE 64
LV +PAPAAA+ S A TQ P + +AP T T ++A+ E
Sbjct: 984 LVPVPAPAAAQAS-APAQTQ-APTSAPAVAPTPAPTPTPAVAQAE 1026
>gi|46409340 ankyrin repeat domain 13 family, member D [Homo
sapiens]
Length = 518
Score = 26.9 bits (58), Expect = 5.6
Identities = 15/57 (26%), Positives = 21/57 (36%)
Query: 52 LTHTHTLSLAEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWG 108
+ H TL L QEP T+L P+ A P L + + +WG
Sbjct: 108 VVHVETLGLTLQEPETLLAAMRPSEEHVASRLTSPIVSTHLDTRNVAFERNKCGIWG 164
>gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 26.6 bits (57), Expect = 7.3
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 80 AQTSRFPFPGFSLGDDDEGRRNQ--RSPVWGSHHYSGYPPPAACLRLPTSP 128
A+TSR P P + G D G R + R+ G SG PPA P P
Sbjct: 10 ARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 60
>gi|169184513 PREDICTED: chromosome 10 open reading frame 105
[Homo sapiens]
Length = 133
Score = 26.6 bits (57), Expect = 7.3
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)
Query: 26 PAAARPSRRRAHTQRTPCTPH 46
PAA PSRRRAH C PH
Sbjct: 61 PAALDPSRRRAH----ECMPH 77
>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 26.6 bits (57), Expect = 7.3
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 80 AQTSRFPFPGFSLGDDDEGRRNQ--RSPVWGSHHYSGYPPPAACLRLPTSP 128
A+TSR P P + G D G R + R+ G SG PPA P P
Sbjct: 31 ARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 81
>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
sapiens]
Length = 315
Score = 26.6 bits (57), Expect = 7.3
Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 26 PAAARPSRRRAHTQRTPCTPHTLAPLLTH-----THTLSLAEQEPLTILQVSGPATARWA 80
PA PSR+R +P P L + H T L +A L QV RWA
Sbjct: 140 PATLPPSRKRNSLGSSPLHPVRLGRVRAHAGPAGTSILRVAPHPALPGAQVHWAGRHRWA 199
Query: 81 QTSRFPFPGFSLGDDDEGRRNQRSP 105
G GRRN SP
Sbjct: 200 ARRGKSLQSAWWGPG--GRRNSISP 222
>gi|239749818 PREDICTED: chromosome 10 open reading frame 105
[Homo sapiens]
Length = 133
Score = 26.6 bits (57), Expect = 7.3
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)
Query: 26 PAAARPSRRRAHTQRTPCTPH 46
PAA PSRRRAH C PH
Sbjct: 61 PAALDPSRRRAH----ECMPH 77
>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
sapiens]
Length = 211
Score = 26.6 bits (57), Expect = 7.3
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 80 AQTSRFPFPGFSLGDDDEGRRNQ--RSPVWGSHHYSGYPPPAACLRLPTSP 128
A+TSR P P + G D G R + R+ G SG PPA P P
Sbjct: 31 ARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 81
>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
sapiens]
Length = 315
Score = 26.6 bits (57), Expect = 7.3
Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 26 PAAARPSRRRAHTQRTPCTPHTLAPLLTH-----THTLSLAEQEPLTILQVSGPATARWA 80
PA PSR+R +P P L + H T L +A L QV RWA
Sbjct: 140 PATLPPSRKRNSLGSSPLHPVRLGRVRAHAGPAGTSILRVAPHPALPGAQVHWAGRHRWA 199
Query: 81 QTSRFPFPGFSLGDDDEGRRNQRSP 105
G GRRN SP
Sbjct: 200 ARRGKSLQSAWWGPG--GRRNSISP 222
>gi|239744108 PREDICTED: chromosome 10 open reading frame 105
[Homo sapiens]
Length = 133
Score = 26.6 bits (57), Expect = 7.3
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)
Query: 26 PAAARPSRRRAHTQRTPCTPH 46
PAA PSRRRAH C PH
Sbjct: 61 PAALDPSRRRAH----ECMPH 77
>gi|169167523 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 26.6 bits (57), Expect = 7.3
Identities = 34/129 (26%), Positives = 42/129 (32%), Gaps = 19/129 (14%)
Query: 5 WGWSDLTLEKFKEGKLVQIPAPAAARPSRRR--AHTQRTPCTPHTLAPLLTHTHTLSLAE 62
WG + TLE + + P A RRR A P P T A T
Sbjct: 22 WGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTR------ 75
Query: 63 QEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACL 122
P T RW + + FP G +G+R + GS P AA
Sbjct: 76 -----------PFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGAAADG 124
Query: 123 RLPTSPWNG 131
RL W G
Sbjct: 125 RLKLRLWRG 133
>gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]
Length = 1503
Score = 26.6 bits (57), Expect = 7.3
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 44 TPHTLAPLLTHTHTL-SLAEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQ 102
TP +L + H L SL P ++ PA + + +T P ++L EG +
Sbjct: 996 TPDSLESVDVHEALLDSLGSHTPQKLVPPDKPADSGY-ETENLESPEWTLHPAPEGTADS 1054
Query: 103 RSPVWGSHHYSGYPP 117
G +SG PP
Sbjct: 1055 EPATTGDGGHSGLPP 1069
>gi|154448886 proline rich 4 (lacrimal) isoform 2 [Homo sapiens]
Length = 134
Score = 26.6 bits (57), Expect = 7.3
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 86 PFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPP 118
P P G+ D+G + QR P G HH PPP
Sbjct: 56 PRPPGDSGNQDDGPQ-QRPPKPGGHHRHPPPPP 87
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,984,545
Number of Sequences: 37866
Number of extensions: 347301
Number of successful extensions: 1150
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1123
Number of HSP's gapped (non-prelim): 46
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.