Guide to the Human Genome
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Search of human proteins with 239746055

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746055 PREDICTED: hypothetical protein [Homo sapiens]
         (141 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757026 PREDICTED: hypothetical protein [Homo sapiens]           302   7e-83
gi|239746055 PREDICTED: hypothetical protein [Homo sapiens]           302   7e-83
gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo ...    37   0.007
gi|239756691 PREDICTED: hypothetical protein [Homo sapiens]            33   0.060
gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo ...    33   0.060
gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]            32   0.13 
gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo ...    32   0.13 
gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo ...    32   0.13 
gi|124248531 hypothetical protein LOC441476 [Homo sapiens]             30   0.50 
gi|110227624 pre T-cell antigen receptor alpha [Homo sapiens]          27   4.3  
gi|22749387 zinc finger, CCHC domain containing 5 [Homo sapiens]       27   4.3  
gi|239754558 PREDICTED: similar to hCG1779533 [Homo sapiens]           27   5.6  
gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]            27   5.6  
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]            27   5.6  
gi|239740972 PREDICTED: hypothetical protein [Homo sapiens]            27   5.6  
gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens]             27   5.6  
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        27   5.6  
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       27   5.6  
gi|46409340 ankyrin repeat domain 13 family, member D [Homo sapi...    27   5.6  
gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]            27   7.3  
gi|169184513 PREDICTED: chromosome 10 open reading frame 105 [Ho...    27   7.3  
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]            27   7.3  
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ...    27   7.3  
gi|239749818 PREDICTED: chromosome 10 open reading frame 105 [Ho...    27   7.3  
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ...    27   7.3  
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ...    27   7.3  
gi|239744108 PREDICTED: chromosome 10 open reading frame 105 [Ho...    27   7.3  
gi|169167523 PREDICTED: hypothetical protein [Homo sapiens]            27   7.3  
gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]                     27   7.3  
gi|154448886 proline rich 4 (lacrimal) isoform 2 [Homo sapiens]        27   7.3  

>gi|239757026 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 141

 Score =  302 bits (773), Expect = 7e-83
 Identities = 141/141 (100%), Positives = 141/141 (100%)

Query: 1   MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL 60
           MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL
Sbjct: 1   MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL 60

Query: 61  AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA 120
           AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA
Sbjct: 61  AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA 120

Query: 121 CLRLPTSPWNGYLFGALQSIL 141
           CLRLPTSPWNGYLFGALQSIL
Sbjct: 121 CLRLPTSPWNGYLFGALQSIL 141


>gi|239746055 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 141

 Score =  302 bits (773), Expect = 7e-83
 Identities = 141/141 (100%), Positives = 141/141 (100%)

Query: 1   MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL 60
           MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL
Sbjct: 1   MTLRWGWSDLTLEKFKEGKLVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSL 60

Query: 61  AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA 120
           AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA
Sbjct: 61  AEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAA 120

Query: 121 CLRLPTSPWNGYLFGALQSIL 141
           CLRLPTSPWNGYLFGALQSIL
Sbjct: 121 CLRLPTSPWNGYLFGALQSIL 141


>gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo
           sapiens]
          Length = 319

 Score = 36.6 bits (83), Expect = 0.007
 Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 10/107 (9%)

Query: 31  PSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQ---------VSG-PATARWA 80
           PSRR+   Q  P  PH     L H       EQE   +LQ         ++G   T  W 
Sbjct: 20  PSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWR 79

Query: 81  QTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACLRLPTS 127
           + SR   PG    +   G R +RS    +H   G  PP+  L L  S
Sbjct: 80  RESREAEPGSGKTNAAWGWRGKRSDGGQTHQPQGPRPPSEALALEGS 126


>gi|239756691 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 319

 Score = 33.5 bits (75), Expect = 0.060
 Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 31  PSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQ---------VSG-PATARWA 80
           PSRR+   Q  P  PH     L H       EQE   +LQ         ++G   T  W 
Sbjct: 20  PSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWR 79

Query: 81  QTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACLRLPTS 127
           + SR   PG    +     R +RS    +H   G  PP+  L L  S
Sbjct: 80  RESREAEPGSGKTNAAWRWRGKRSDGGQTHQPQGPRPPSEALALEGS 126


>gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo
           sapiens]
          Length = 319

 Score = 33.5 bits (75), Expect = 0.060
 Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 31  PSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQ---------VSG-PATARWA 80
           PSRR+   Q  P  PH     L H       EQE   +LQ         ++G   T  W 
Sbjct: 20  PSRRQMRDQHPPHKPHPAPQPLPHQARDLAGEQEGSRVLQQLLLVPNFILAGLRETNPWR 79

Query: 81  QTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACLRLPTS 127
           + SR   PG    +     R +RS    +H   G  PP+  L L  S
Sbjct: 80  RESREAEPGSGKTNAAWRWRGKRSDGGQTHQPQGPRPPSEALALEGS 126


>gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 327

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 20/120 (16%)

Query: 24  PAPAAARPSRRRAHTQRTP----CTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARW 79
           P P    PS  R    R P      P TLAP         L  Q P    Q SG  ++  
Sbjct: 163 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSS-- 220

Query: 80  AQTSRFPF----PGFSLGDDDEGRRNQRSPVWGSHH---------YSGYPPPAACLRLPT 126
            Q   FP       F  G      +  R+P+ GS +         +  YPP AACL LPT
Sbjct: 221 -QLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPT 279


>gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo
           sapiens]
          Length = 264

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 20/120 (16%)

Query: 24  PAPAAARPSRRRAHTQRTP----CTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARW 79
           P P    PS  R    R P      P TLAP         L  Q P    Q SG  ++  
Sbjct: 100 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSS-- 157

Query: 80  AQTSRFPF----PGFSLGDDDEGRRNQRSPVWGSHH---------YSGYPPPAACLRLPT 126
            Q   FP       F  G      +  R+P+ GS +         +  YPP AACL LPT
Sbjct: 158 -QLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPT 216


>gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo
           sapiens]
          Length = 264

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 20/120 (16%)

Query: 24  PAPAAARPSRRRAHTQRTP----CTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARW 79
           P P    PS  R    R P      P TLAP         L  Q P    Q SG  ++  
Sbjct: 100 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSS-- 157

Query: 80  AQTSRFPF----PGFSLGDDDEGRRNQRSPVWGSHH---------YSGYPPPAACLRLPT 126
            Q   FP       F  G      +  R+P+ GS +         +  YPP AACL LPT
Sbjct: 158 -QLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPT 216


>gi|124248531 hypothetical protein LOC441476 [Homo sapiens]
          Length = 308

 Score = 30.4 bits (67), Expect = 0.50
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 44  TPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARWAQTS-----RFPFPGFSLGDDDEG 98
           TP    P  T T    L EQ PL    +  P+  R+   S       P P +S+G   +G
Sbjct: 74  TPQESLPTYTQTLRELLLEQRPLITADLEVPSPTRYQVPSPSVRESSPHPHYSIGCKHQG 133

Query: 99  RRNQRSPVWGSHHYSGYPP 117
           R       W +  +    P
Sbjct: 134 REGGGRRAWQTLWFQSESP 152


>gi|110227624 pre T-cell antigen receptor alpha [Homo sapiens]
          Length = 281

 Score = 27.3 bits (59), Expect = 4.3
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 11/75 (14%)

Query: 74  PAT---ARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHY-SGYPP-PA------ACL 122
           PAT    R A +S  P P      D    R   SPVWG   Y S YP  PA      + L
Sbjct: 198 PATETGGREATSSPRPQPRDRRWGDTPPGRKPGSPVWGEGSYLSSYPTCPAQAWCSRSAL 257

Query: 123 RLPTSPWNGYLFGAL 137
           R P+S    +  G L
Sbjct: 258 RAPSSSLGAFFAGDL 272


>gi|22749387 zinc finger, CCHC domain containing 5 [Homo sapiens]
          Length = 475

 Score = 27.3 bits (59), Expect = 4.3
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 7   WSDLTLEKFKEGKLVQIPAPAAARPSRRRA--HTQRTPCTPHTLAPLLTHTHTLSLAEQE 64
           W      +FKE +  + P P    P    A    Q  P  P +LAP  T          E
Sbjct: 74  WEAQKTPEFKEPQ--KPPEPQDLLPWEPPAAWELQEAPAAPESLAPPATRESQKPPMAHE 131

Query: 65  PLTILQVSGPATARWAQTSRFP 86
             T+L+  GPA  + A  ++ P
Sbjct: 132 IPTVLEGQGPANTQDATIAQEP 153


>gi|239754558 PREDICTED: similar to hCG1779533 [Homo sapiens]
          Length = 212

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 42  PCTPHTL-APLLTHTHTLSLAEQEPLTI-----LQVSGPATARWAQTSRF-PFPGFSLGD 94
           P   HT  A  L H  T+      P ++          P T        F P P  +   
Sbjct: 2   PAEAHTFGAKWLLHLTTMKTGLLPPSSLSRPRTFSSQPPQTKLMTHNGLFRPIPYLTAVS 61

Query: 95  DDEGRRNQRSPVWGSHHYSGYPPPAACL 122
            DE   +Q+ P    H Y+G   P++CL
Sbjct: 62  ADEATASQQPPQAQLHRYNGLFRPSSCL 89


>gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 34/129 (26%), Positives = 42/129 (32%), Gaps = 19/129 (14%)

Query: 5   WGWSDLTLEKFKEGKLVQIPAPAAARPSRRR--AHTQRTPCTPHTLAPLLTHTHTLSLAE 62
           WG +  TLE  +     +   P A    RRR  A     P  P T A     T       
Sbjct: 22  WGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTR------ 75

Query: 63  QEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACL 122
                      P T RW + + FP  G       +G+R +     GS      P  AA  
Sbjct: 76  -----------PFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPVAAADG 124

Query: 123 RLPTSPWNG 131
           RL    W G
Sbjct: 125 RLKLQLWRG 133


>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
          Length = 1486

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 10/93 (10%)

Query: 36  AHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDD 95
           A T     TP T  P+ T T T S+   E  T    S P+T    +T        S+   
Sbjct: 152 AFTSSYTSTPVTQKPVTTVTSTYSMTTTEKGTSAMTSSPSTTTARETPIVTVTPSSVSAT 211

Query: 96  D---------EGRRNQRSPV-WGSHHYSGYPPP 118
           D           R  +R+P+  GS H +  P P
Sbjct: 212 DTTFHTTISSTTRTTERTPLPTGSIHTTTSPTP 244


>gi|239740972 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 389

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 86  PFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACL 122
           P P  +    DE   +Q+ P    H Y+G   P++CL
Sbjct: 32  PIPYVTAASADEATASQQPPQAQLHRYNGLFRPSSCL 68


>gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens]
          Length = 596

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 10/93 (10%)

Query: 36  AHTQRTPCTPHTLAPLLTHTHTLSLAEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDD 95
           A T     TP T  P+ T T T S+   E  T    S P+T    +T        S+   
Sbjct: 152 AFTSSYTSTPVTQKPVTTVTSTYSMTTTEKGTSAMTSSPSTTTARETPIVTVTPSSVSAT 211

Query: 96  D---------EGRRNQRSPV-WGSHHYSGYPPP 118
           D           R  +R+P+  GS H +  P P
Sbjct: 212 DTTFHTTISSTTRTTERTPLPTGSIHTTTSPTP 244


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 20  LVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQE 64
           LV +PAPAAA+ S   A TQ  P +   +AP    T T ++A+ E
Sbjct: 575 LVPVPAPAAAQAS-APAQTQ-APTSAPAVAPTPAPTPTPAVAQAE 617


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 20   LVQIPAPAAARPSRRRAHTQRTPCTPHTLAPLLTHTHTLSLAEQE 64
            LV +PAPAAA+ S   A TQ  P +   +AP    T T ++A+ E
Sbjct: 984  LVPVPAPAAAQAS-APAQTQ-APTSAPAVAPTPAPTPTPAVAQAE 1026


>gi|46409340 ankyrin repeat domain 13 family, member D [Homo
           sapiens]
          Length = 518

 Score = 26.9 bits (58), Expect = 5.6
 Identities = 15/57 (26%), Positives = 21/57 (36%)

Query: 52  LTHTHTLSLAEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWG 108
           + H  TL L  QEP T+L    P+    A     P     L   +      +  +WG
Sbjct: 108 VVHVETLGLTLQEPETLLAAMRPSEEHVASRLTSPIVSTHLDTRNVAFERNKCGIWG 164


>gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 190

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 80  AQTSRFPFPGFSLGDDDEGRRNQ--RSPVWGSHHYSGYPPPAACLRLPTSP 128
           A+TSR P P  + G  D G R +  R+   G    SG  PPA     P  P
Sbjct: 10  ARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 60


>gi|169184513 PREDICTED: chromosome 10 open reading frame 105
          [Homo sapiens]
          Length = 133

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)

Query: 26 PAAARPSRRRAHTQRTPCTPH 46
          PAA  PSRRRAH     C PH
Sbjct: 61 PAALDPSRRRAH----ECMPH 77


>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 80  AQTSRFPFPGFSLGDDDEGRRNQ--RSPVWGSHHYSGYPPPAACLRLPTSP 128
           A+TSR P P  + G  D G R +  R+   G    SG  PPA     P  P
Sbjct: 31  ARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 81


>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
           sapiens]
          Length = 315

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 26  PAAARPSRRRAHTQRTPCTPHTLAPLLTH-----THTLSLAEQEPLTILQVSGPATARWA 80
           PA   PSR+R     +P  P  L  +  H     T  L +A    L   QV      RWA
Sbjct: 140 PATLPPSRKRNSLGSSPLHPVRLGRVRAHAGPAGTSILRVAPHPALPGAQVHWAGRHRWA 199

Query: 81  QTSRFPFPGFSLGDDDEGRRNQRSP 105
                       G    GRRN  SP
Sbjct: 200 ARRGKSLQSAWWGPG--GRRNSISP 222


>gi|239749818 PREDICTED: chromosome 10 open reading frame 105
          [Homo sapiens]
          Length = 133

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)

Query: 26 PAAARPSRRRAHTQRTPCTPH 46
          PAA  PSRRRAH     C PH
Sbjct: 61 PAALDPSRRRAH----ECMPH 77


>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
           sapiens]
          Length = 211

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 80  AQTSRFPFPGFSLGDDDEGRRNQ--RSPVWGSHHYSGYPPPAACLRLPTSP 128
           A+TSR P P  + G  D G R +  R+   G    SG  PPA     P  P
Sbjct: 31  ARTSRQPDPRQAAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRAYPLQP 81


>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
           sapiens]
          Length = 315

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 26  PAAARPSRRRAHTQRTPCTPHTLAPLLTH-----THTLSLAEQEPLTILQVSGPATARWA 80
           PA   PSR+R     +P  P  L  +  H     T  L +A    L   QV      RWA
Sbjct: 140 PATLPPSRKRNSLGSSPLHPVRLGRVRAHAGPAGTSILRVAPHPALPGAQVHWAGRHRWA 199

Query: 81  QTSRFPFPGFSLGDDDEGRRNQRSP 105
                       G    GRRN  SP
Sbjct: 200 ARRGKSLQSAWWGPG--GRRNSISP 222


>gi|239744108 PREDICTED: chromosome 10 open reading frame 105
          [Homo sapiens]
          Length = 133

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 4/21 (19%)

Query: 26 PAAARPSRRRAHTQRTPCTPH 46
          PAA  PSRRRAH     C PH
Sbjct: 61 PAALDPSRRRAH----ECMPH 77


>gi|169167523 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 34/129 (26%), Positives = 42/129 (32%), Gaps = 19/129 (14%)

Query: 5   WGWSDLTLEKFKEGKLVQIPAPAAARPSRRR--AHTQRTPCTPHTLAPLLTHTHTLSLAE 62
           WG +  TLE  +     +   P A    RRR  A     P  P T A     T       
Sbjct: 22  WGVAPSTLEGLESPPHPETQRPRAGAGGRRRWGATGGEGPRRPATRACADPGTR------ 75

Query: 63  QEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPPAACL 122
                      P T RW + + FP  G       +G+R +     GS      P  AA  
Sbjct: 76  -----------PFTYRWNRDAPFPGRGRFSRTRGDGKRARTEAPSGSAAEKPLPGAAADG 124

Query: 123 RLPTSPWNG 131
           RL    W G
Sbjct: 125 RLKLRLWRG 133


>gi|38016937 lemur tyrosine kinase 2 [Homo sapiens]
          Length = 1503

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 44   TPHTLAPLLTHTHTL-SLAEQEPLTILQVSGPATARWAQTSRFPFPGFSLGDDDEGRRNQ 102
            TP +L  +  H   L SL    P  ++    PA + + +T     P ++L    EG  + 
Sbjct: 996  TPDSLESVDVHEALLDSLGSHTPQKLVPPDKPADSGY-ETENLESPEWTLHPAPEGTADS 1054

Query: 103  RSPVWGSHHYSGYPP 117
                 G   +SG PP
Sbjct: 1055 EPATTGDGGHSGLPP 1069


>gi|154448886 proline rich 4 (lacrimal) isoform 2 [Homo sapiens]
          Length = 134

 Score = 26.6 bits (57), Expect = 7.3
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 86  PFPGFSLGDDDEGRRNQRSPVWGSHHYSGYPPP 118
           P P    G+ D+G + QR P  G HH    PPP
Sbjct: 56  PRPPGDSGNQDDGPQ-QRPPKPGGHHRHPPPPP 87


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,984,545
Number of Sequences: 37866
Number of extensions: 347301
Number of successful extensions: 1150
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1123
Number of HSP's gapped (non-prelim): 46
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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