Guide to the Human Genome
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Name: C10orf105 Sequence: fasta or formatted (133aa) NCBI GI: 239744108
Description:

PREDICTED: chromosome 10 open reading frame 105

Not currently referenced in the text

Other entries for this name:
alt mRNA {133aa} PREDICTED: chromosome 10 open reading frame 105
alt mRNA {133aa} PREDICTED: chromosome 10 open reading frame 105
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         12           2
 C cysteine            3.8          5           1
 D aspartate           3.0          4           1
 E glutamate           4.5          6           1
 F phenylalanine       3.0          4           1
 G glycine             4.5          6           1
 H histidine           4.5          6           2
 I isoleucine          2.3          3           1
 K lysine              2.3          3           1
 L leucine            15.8         21           3
 M methionine          4.5          6           1
 N asparagine          0.8          1           1
 P proline            13.5         18           1
 Q glutamine           1.5          2           1
 R arginine            7.5         10           3
 S serine             10.5         14           2
 T threonine           6.0          8           1
 V valine              1.5          2           1
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: chromosome 10 open reading frame 105 [Ho... 
C10orf105             1.000   PREDICTED: chromosome 10 open reading frame 105 [Ho...
C10orf105             1.000   PREDICTED: chromosome 10 open reading frame 105 [Ho...
TMEM132E              0.020   transmembrane protein 132E 
ATG9B                 0.020   ATG9 autophagy related 9 homolog B 
LOC100129196          0.020   PREDICTED: hypothetical protein 
LOC100129196          0.020   PREDICTED: hypothetical protein 
PCDHAC1               0.016   protocadherin alpha subfamily C, 1 isoform 1 precurs...
PCDHAC1               0.016   protocadherin alpha subfamily C, 1 isoform 2 precurs...
C19orf67              0.016   PREDICTED: chromosome 19 open reading frame 67 [Hom...
C19orf67              0.016   PREDICTED: chromosome 19 open reading frame 67 [Homo...
C19orf67              0.016   PREDICTED: chromosome 19 open reading frame 67 [Homo...
CAMK2D                0.016   calcium/calmodulin-dependent protein kinase II delta...
NRD1                  0.016   nardilysin isoform b 
NRD1                  0.016   nardilysin isoform a 
CACNA1A               0.012   calcium channel, alpha 1A subunit isoform 4 
CACNA1A               0.012   calcium channel, alpha 1A subunit isoform 3 
LOC100291910          0.012   PREDICTED: hypothetical protein XP_002345652 
CYP11B2               0.012   cytochrome P450, family 11, subfamily B, polypeptid...
RIMBP3B               0.012   RIMS binding protein 3B 
RIMBP3C               0.012   RIMS binding protein 3C 
LOC100132515          0.012   PREDICTED: similar to hCG2045429 
LOC100132515          0.012   PREDICTED: similar to hCG2045429 
LOC100132515          0.012   PREDICTED: similar to hCG2045429 
DAB2IP                0.012   disabled homolog 2 interacting protein isoform 2 [Ho...
DAB2IP                0.012   disabled homolog 2 interacting protein isoform 1 [Ho...
TNFSF9                0.012   tumor necrosis factor (ligand) superfamily, member 9 ...
RIMBP3                0.012   DKFZP434H0735 protein 
BCAS3                 0.012   breast carcinoma amplified sequence 3 isoform 1 [Ho...
TBC1D16               0.008   TBC1 domain family, member 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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