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Search of human proteins with 239745970
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745970 PREDICTED: hypothetical protein XP_002343628 [Homo
sapiens]
(138 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745970 PREDICTED: hypothetical protein XP_002343628 [Homo ... 298 7e-82
gi|239756961 PREDICTED: hypothetical protein [Homo sapiens] 213 4e-56
gi|239751466 PREDICTED: hypothetical protein XP_002347845 [Homo ... 122 9e-29
gi|239756227 PREDICTED: hypothetical protein [Homo sapiens] 106 7e-24
gi|239752641 PREDICTED: hypothetical protein [Homo sapiens] 106 7e-24
gi|239745050 PREDICTED: hypothetical protein XP_002343356 [Homo ... 106 7e-24
gi|7706501 WW domain binding protein 11 [Homo sapiens] 42 1e-04
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 39 0.001
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 39 0.001
gi|239754717 PREDICTED: hypothetical protein [Homo sapiens] 37 0.005
gi|239749265 PREDICTED: hypothetical protein [Homo sapiens] 37 0.005
gi|239743362 PREDICTED: hypothetical protein XP_002342841 [Homo ... 37 0.005
gi|239509054 PREDICTED: similar to RAB19, member RAS oncogene fa... 37 0.005
gi|75677594 forkhead box D4 [Homo sapiens] 37 0.007
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 36 0.009
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 36 0.009
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 36 0.009
gi|18079216 CASK interacting protein 1 [Homo sapiens] 35 0.020
gi|169202970 PREDICTED: hypothetical protein [Homo sapiens] 34 0.034
gi|169203510 PREDICTED: hypothetical protein [Homo sapiens] 34 0.034
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 34 0.034
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 34 0.034
gi|239756083 PREDICTED: hypothetical protein [Homo sapiens] 34 0.044
gi|239750612 PREDICTED: hypothetical protein [Homo sapiens] 34 0.044
gi|239748690 PREDICTED: hypothetical protein [Homo sapiens] 34 0.044
gi|239744919 PREDICTED: hypothetical protein XP_002343307 [Homo ... 34 0.044
gi|239742713 PREDICTED: hypothetical protein [Homo sapiens] 34 0.044
gi|157042770 forkhead box D4-like 3 [Homo sapiens] 34 0.044
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 34 0.044
gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s... 34 0.044
>gi|239745970 PREDICTED: hypothetical protein XP_002343628 [Homo
sapiens]
Length = 138
Score = 298 bits (764), Expect = 7e-82
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MSPGLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLC 60
MSPGLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLC
Sbjct: 1 MSPGLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLC 60
Query: 61 SREGEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLF 120
SREGEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLF
Sbjct: 61 SREGEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLF 120
Query: 121 WAPEVLRSPFPGPGTPSA 138
WAPEVLRSPFPGPGTPSA
Sbjct: 121 WAPEVLRSPFPGPGTPSA 138
>gi|239756961 PREDICTED: hypothetical protein [Homo sapiens]
Length = 105
Score = 213 bits (542), Expect = 4e-56
Identities = 105/138 (76%), Positives = 105/138 (76%), Gaps = 33/138 (23%)
Query: 1 MSPGLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLC 60
MSPGLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLC
Sbjct: 1 MSPGLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLC 60
Query: 61 SREGEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLF 120
S GHADGNIPAGPGLCSPQLLLPGGQLF
Sbjct: 61 S---------------------------------GHADGNIPAGPGLCSPQLLLPGGQLF 87
Query: 121 WAPEVLRSPFPGPGTPSA 138
WAPEVLRSPFPGPGTPSA
Sbjct: 88 WAPEVLRSPFPGPGTPSA 105
>gi|239751466 PREDICTED: hypothetical protein XP_002347845 [Homo
sapiens]
Length = 80
Score = 122 bits (306), Expect = 9e-29
Identities = 70/138 (50%), Positives = 70/138 (50%), Gaps = 58/138 (42%)
Query: 1 MSPGLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLC 60
MSPGLGVHLQRKHVTKHLPV PG P P
Sbjct: 1 MSPGLGVHLQRKHVTKHLPV------------PGPISVGPQAAP---------------- 32
Query: 61 SREGEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLF 120
PG GHADGNIPAGPGLCSPQLLLPGGQLF
Sbjct: 33 ------------------------------PGATGHADGNIPAGPGLCSPQLLLPGGQLF 62
Query: 121 WAPEVLRSPFPGPGTPSA 138
WAPEVLRSPFPGPGTPSA
Sbjct: 63 WAPEVLRSPFPGPGTPSA 80
>gi|239756227 PREDICTED: hypothetical protein [Homo sapiens]
Length = 50
Score = 106 bits (264), Expect = 7e-24
Identities = 47/49 (95%), Positives = 47/49 (95%)
Query: 90 WPGREGHADGNIPAGPGLCSPQLLLPGGQLFWAPEVLRSPFPGPGTPSA 138
WPGREGHADGNIPAGPGLCSPQLLL G QLFWAPEVLRSPFPGPGTPSA
Sbjct: 2 WPGREGHADGNIPAGPGLCSPQLLLLGWQLFWAPEVLRSPFPGPGTPSA 50
>gi|239752641 PREDICTED: hypothetical protein [Homo sapiens]
Length = 50
Score = 106 bits (264), Expect = 7e-24
Identities = 47/49 (95%), Positives = 47/49 (95%)
Query: 90 WPGREGHADGNIPAGPGLCSPQLLLPGGQLFWAPEVLRSPFPGPGTPSA 138
WPGREGHADGNIPAGPGLCSPQLLL G QLFWAPEVLRSPFPGPGTPSA
Sbjct: 2 WPGREGHADGNIPAGPGLCSPQLLLLGWQLFWAPEVLRSPFPGPGTPSA 50
>gi|239745050 PREDICTED: hypothetical protein XP_002343356 [Homo
sapiens]
Length = 50
Score = 106 bits (264), Expect = 7e-24
Identities = 47/49 (95%), Positives = 47/49 (95%)
Query: 90 WPGREGHADGNIPAGPGLCSPQLLLPGGQLFWAPEVLRSPFPGPGTPSA 138
WPGREGHADGNIPAGPGLCSPQLLL G QLFWAPEVLRSPFPGPGTPSA
Sbjct: 2 WPGREGHADGNIPAGPGLCSPQLLLLGWQLFWAPEVLRSPFPGPGTPSA 50
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 42.4 bits (98), Expect = 1e-04
Identities = 44/118 (37%), Positives = 47/118 (39%), Gaps = 23/118 (19%)
Query: 19 PVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEGRKGEALGRQGPL 78
P+PGP +GP APP PP P G PG P L R G +GPL
Sbjct: 406 PMPGPPPLGPPPAPP----LRPPGPPTGLPPGPPPGAPPFL-------RPPGMPGLRGPL 454
Query: 79 RSSSLLPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLFWAPEVLRSPFPGPGTP 136
LLPP P PGR P GP P L PG P L P P PG P
Sbjct: 455 --PRLLPPGPP-PGR--------PPGPPPGPPPGLPPGPPPRGPPPRLPPPAP-PGIP 500
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 39.3 bits (90), Expect = 0.001
Identities = 41/129 (31%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 19 PVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEG-------RKGEA 71
P+PG + + + PG T PP P + IP P EG G G A
Sbjct: 611 PLPGGVCISSPPSLPGGTAISPP--PPLSGDATIPPPPP---LPEGVGIPSPSSLPGGTA 665
Query: 72 LGRQGPLRSSSLL-PPLPTWPGREG--HADGNIPAGPGLCSPQLLLPGGQLFWAPEVLRS 128
+ PL S+ + PP P PG G +P G+ P LPGG P
Sbjct: 666 IPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPP----P 721
Query: 129 PFP-GPGTP 136
PFP GPG P
Sbjct: 722 PFPGGPGIP 730
Score = 37.0 bits (84), Expect = 0.005
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 25/123 (20%)
Query: 20 VPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEGRKGEALGRQGPLR 79
+P P + G PP PP PL GG + P L G A+ PL
Sbjct: 587 IPPPPAPGDSTTPPPPPPPPPPPPPL--PGGVCISSPPSLPG-------GTAISPPPPLS 637
Query: 80 SSSLLPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLFWAPEVL----RSPFPGPGT 135
+ +PP P +P G G+ SP LPGG P L R P P P
Sbjct: 638 GDATIPPPPP-----------LPEGVGIPSPS-SLPGGTAIPPPPPLPGSARIPPPPPPL 685
Query: 136 PSA 138
P +
Sbjct: 686 PGS 688
Score = 31.6 bits (70), Expect = 0.22
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 20 VPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEGRKGEALGRQGPLR 79
+PG ++ P PG+ PP PL S G IP P L G PL
Sbjct: 660 LPGGTAIPPPPPLPGSARIPPPPPPLPGSAG-IPPPPPPLPGEAGMPPP------PPPLP 712
Query: 80 SSSLLPPLPTWPGREGHADGNIPAGPGLCSP 110
+PP P +PG G P PG+ P
Sbjct: 713 GGPGIPPPPPFPG----GPGIPPPPPGMGMP 739
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 39.3 bits (90), Expect = 0.001
Identities = 41/129 (31%), Positives = 51/129 (39%), Gaps = 20/129 (15%)
Query: 19 PVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEG-------RKGEA 71
P+PG + + + PG T PP P + IP P EG G G A
Sbjct: 620 PLPGGVCISSPPSLPGGTAISPP--PPLSGDATIPPPPP---LPEGVGIPSPSSLPGGTA 674
Query: 72 LGRQGPLRSSSLL-PPLPTWPGREG--HADGNIPAGPGLCSPQLLLPGGQLFWAPEVLRS 128
+ PL S+ + PP P PG G +P G+ P LPGG P
Sbjct: 675 IPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPP----P 730
Query: 129 PFP-GPGTP 136
PFP GPG P
Sbjct: 731 PFPGGPGIP 739
Score = 37.0 bits (84), Expect = 0.005
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 25/123 (20%)
Query: 20 VPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEGRKGEALGRQGPLR 79
+P P + G PP PP PL GG + P L G A+ PL
Sbjct: 596 IPPPPAPGDSTTPPPPPPPPPPPPPL--PGGVCISSPPSLPG-------GTAISPPPPLS 646
Query: 80 SSSLLPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLFWAPEVL----RSPFPGPGT 135
+ +PP P +P G G+ SP LPGG P L R P P P
Sbjct: 647 GDATIPPPPP-----------LPEGVGIPSPS-SLPGGTAIPPPPPLPGSARIPPPPPPL 694
Query: 136 PSA 138
P +
Sbjct: 695 PGS 697
Score = 31.6 bits (70), Expect = 0.22
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 11/91 (12%)
Query: 20 VPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEGRKGEALGRQGPLR 79
+PG ++ P PG+ PP PL S G IP P L G PL
Sbjct: 669 LPGGTAIPPPPPLPGSARIPPPPPPLPGSAG-IPPPPPPLPGEAGMPPP------PPPLP 721
Query: 80 SSSLLPPLPTWPGREGHADGNIPAGPGLCSP 110
+PP P +PG G P PG+ P
Sbjct: 722 GGPGIPPPPPFPG----GPGIPPPPPGMGMP 748
>gi|239754717 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 37.0 bits (84), Expect = 0.005
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 4 GLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSRE 63
G+GV V P P ++V P A TV +P +P RL +
Sbjct: 84 GIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNFRDHIVP---VRLRGED 140
Query: 64 GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSP 110
GE R+GE + P+RS P R + GP C+P
Sbjct: 141 GEARRGEGKDTEAPVRS-------PPATRRVSERSRHFNCGPRACAP 180
>gi|239749265 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 37.0 bits (84), Expect = 0.005
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 4 GLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSRE 63
G+GV V P P ++V P A TV +P +P RL +
Sbjct: 84 GIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNFRDHIVP---VRLRGED 140
Query: 64 GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSP 110
GE R+GE + P+RS P R + GP C+P
Sbjct: 141 GEARRGEGKDTEAPVRS-------PPATRRVSERSRHFNCGPRACAP 180
>gi|239743362 PREDICTED: hypothetical protein XP_002342841 [Homo
sapiens]
Length = 229
Score = 37.0 bits (84), Expect = 0.005
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 4 GLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSRE 63
G+GV V P P ++V P A TV +P +P RL +
Sbjct: 84 GIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNFRDHIVP---VRLRGED 140
Query: 64 GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSP 110
GE R+GE + P+RS P R + GP C+P
Sbjct: 141 GEARRGEGKDTEAPVRS-------PPATRRVSERSRHFNCGPRACAP 180
>gi|239509054 PREDICTED: similar to RAB19, member RAS oncogene
family [Homo sapiens]
Length = 339
Score = 37.0 bits (84), Expect = 0.005
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 4 GLGVHLQRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSRE 63
G+GV V P P ++V P A TV +P +P RL +
Sbjct: 194 GIGVGEAAAAVAAAAPAPDVVAVVPGVAASAITVYPTQQRPRNFRDHIVP---VRLRGED 250
Query: 64 GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGLCSP 110
GE R+GE + P+RS P R + GP C+P
Sbjct: 251 GEARRGEGKDTEAPVRS-------PPATRRVSERSRHFNCGPRACAP 290
>gi|75677594 forkhead box D4 [Homo sapiens]
Length = 439
Score = 36.6 bits (83), Expect = 0.007
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
Query: 10 QRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEGRKG 69
+RK +H P PG P P H P + P P G GR+
Sbjct: 196 RRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVPGAYPNTGPGRRP 255
Query: 70 EALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPG---LCSPQLLLPGGQ 118
AL P R LL P + G A+G A P CSP L+L G+
Sbjct: 256 YALLHPHPPR--YLLLSAPAYAGAPKKAEGADLATPAPFPCCSPHLVLSLGR 305
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 36.2 bits (82), Expect = 0.009
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 21/129 (16%)
Query: 10 QRKHVTKHLPVPGPISVGPQAAPPGATVTH--PPTKPLICSGGFIPGTRPRLCSR--EGE 65
+++H H P + P ++PP +T PPT PGT+P R EG
Sbjct: 25 RKRHPLSHTP---HATAHPPSSPPPLHITPVLPPT---------FPGTQPPRALRLAEGS 72
Query: 66 GRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNI----PAGPGLCSPQLLLPGGQ-LF 120
G + GR+ R L PP G G + +GPGL S P + L
Sbjct: 73 GEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLT 132
Query: 121 WAPEVLRSP 129
P + SP
Sbjct: 133 CQPRSIESP 141
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 36.2 bits (82), Expect = 0.009
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 21/129 (16%)
Query: 10 QRKHVTKHLPVPGPISVGPQAAPPGATVTH--PPTKPLICSGGFIPGTRPRLCSR--EGE 65
+++H H P + P ++PP +T PPT PGT+P R EG
Sbjct: 43 RKRHPLSHTP---HATAHPPSSPPPLHITPVLPPT---------FPGTQPPRALRLAEGS 90
Query: 66 GRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNI----PAGPGLCSPQLLLPGGQ-LF 120
G + GR+ R L PP G G + +GPGL S P + L
Sbjct: 91 GEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLT 150
Query: 121 WAPEVLRSP 129
P + SP
Sbjct: 151 CQPRSIESP 159
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 36.2 bits (82), Expect = 0.009
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 21/129 (16%)
Query: 10 QRKHVTKHLPVPGPISVGPQAAPPGATVTH--PPTKPLICSGGFIPGTRPRLCSR--EGE 65
+++H H P + P ++PP +T PPT PGT+P R EG
Sbjct: 43 RKRHPLSHTP---HATAHPPSSPPPLHITPVLPPT---------FPGTQPPRALRLAEGS 90
Query: 66 GRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNI----PAGPGLCSPQLLLPGGQ-LF 120
G + GR+ R L PP G G + +GPGL S P + L
Sbjct: 91 GEGKQEEGRRAQARPRPLRPPWEVRGGARGPCSAPVGSRASSGPGLPSAAAARPARKTLT 150
Query: 121 WAPEVLRSP 129
P + SP
Sbjct: 151 CQPRSIESP 159
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 35.0 bits (79), Expect = 0.020
Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 23/132 (17%)
Query: 22 GPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGE-------------GRK 68
GP VGP P + + PPT G R R S E R
Sbjct: 667 GPAEVGPTTEKPSSHL--PPTPRATTRQDSSLGGRARHMSSSQELLGDGPPGPSSPMSRS 724
Query: 69 GEALGRQGPLRSSSLLPPLPTWPGREGHA--DGNIPAGPGLCSPQLLLPGGQLFWAPEVL 126
E L +GP + PP PGR GH+ ++P PG P+ +LP G + P
Sbjct: 725 QEYLLDEGPAPGT---PPREARPGRHGHSIKRASVPPVPG--KPRQVLPPGTSHFTPPQT 779
Query: 127 RSPFPGPGTPSA 138
+ PG+P A
Sbjct: 780 PTK-TRPGSPQA 790
Score = 27.3 bits (59), Expect = 4.1
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 84 LPPLPTWPGREGHADGNIPAGPGLCSPQLLLPGGQLFWAPEVL--RSPFPGPGTP 136
LPPLP P E P P P L P +L +P + P PGPG+P
Sbjct: 1208 LPPLPP-PEGEARKPAKPPVSP---KPVLTQPVPKLQGSPTPTSKKVPLPGPGSP 1258
>gi|169202970 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 34.3 bits (77), Expect = 0.034
Identities = 39/129 (30%), Positives = 46/129 (35%), Gaps = 16/129 (12%)
Query: 19 PVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRP------RLCSREGEGR---KG 69
P P P+S PP A + PPT P +G F P RP C + E R
Sbjct: 40 PPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSF-PACRPGARFGAARCHQSRENRLVSPA 98
Query: 70 EALGRQG-PLRSSSLLPPLPTWPGREGHADGNIP----AGPGLCSPQLLLPGGQLFWAPE 124
E+ G PL PPLP W G N G L G + P
Sbjct: 99 ESDKMSGTPLPPPQFSPPLP-WSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPP 157
Query: 125 VLRSPFPGP 133
+L SP P P
Sbjct: 158 LLPSPAPFP 166
>gi|169203510 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 34.3 bits (77), Expect = 0.034
Identities = 39/129 (30%), Positives = 46/129 (35%), Gaps = 16/129 (12%)
Query: 19 PVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRP------RLCSREGEGR---KG 69
P P P+S PP A + PPT P +G F P RP C + E R
Sbjct: 40 PPPHPLSSRRGLGPPRAGGSPPPTAPPTPTGSF-PACRPGARFGAARCHQSRENRLVSPA 98
Query: 70 EALGRQG-PLRSSSLLPPLPTWPGREGHADGNIP----AGPGLCSPQLLLPGGQLFWAPE 124
E+ G PL PPLP W G N G L G + P
Sbjct: 99 ESDKMSGTPLPPPQFSPPLP-WSAGAGQGKRNRQLQENGGARLLLGAFRAAPGHVTRTPP 157
Query: 125 VLRSPFPGP 133
+L SP P P
Sbjct: 158 LLPSPAPFP 166
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 34.3 bits (77), Expect = 0.034
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 19 PVPGPISVGPQAAPPG-ATVTHPPTKPLICSGGFIP-GTRPRLCSREGEGRK--GEALGR 74
P PGP G +A PPG T+ PP L S P G R G + G+ LG
Sbjct: 451 PEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGGGAVGARSPGDVLGS 510
Query: 75 QGPLRSSSLLPP 86
G L S LPP
Sbjct: 511 GGGLIGSDSLPP 522
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 34.3 bits (77), Expect = 0.034
Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 19 PVPGPISVGPQAAPPG-ATVTHPPTKPLICSGGFIP-GTRPRLCSREGEGRK--GEALGR 74
P PGP G +A PPG T+ PP L S P G R G + G+ LG
Sbjct: 451 PEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGGGAVGARSPGDVLGS 510
Query: 75 QGPLRSSSLLPP 86
G L S LPP
Sbjct: 511 GGGLIGSDSLPP 522
>gi|239756083 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 33.9 bits (76), Expect = 0.044
Identities = 30/66 (45%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 48 SGGFIPGTR-PRLCSRE-GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHAD---GNIP 102
SGGF PG+R PR R G GR+G R GPLR +S LP L G+ G A G+
Sbjct: 111 SGGF-PGSRTPRAAERTIGPGRRGAPGRRTGPLRENS-LPVLRPGVGQTGTAPLARGSRG 168
Query: 103 AGPGLC 108
AG C
Sbjct: 169 AGRSPC 174
>gi|239750612 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 33.9 bits (76), Expect = 0.044
Identities = 30/66 (45%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 48 SGGFIPGTR-PRLCSRE-GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHAD---GNIP 102
SGGF PG+R PR R G GR+G R GPLR +S LP L G+ G A G+
Sbjct: 111 SGGF-PGSRTPRAAERTIGPGRRGAPGRRTGPLRENS-LPVLRPGVGQTGTAPLARGSRG 168
Query: 103 AGPGLC 108
AG C
Sbjct: 169 AGRSPC 174
>gi|239748690 PREDICTED: hypothetical protein [Homo sapiens]
Length = 134
Score = 33.9 bits (76), Expect = 0.044
Identities = 32/124 (25%), Positives = 41/124 (33%), Gaps = 42/124 (33%)
Query: 19 PVPGPISVGPQAAPP------GATVTHPPTKPLICSG-----------GFIPGTRPRLCS 61
P P P+S P P A V PP+ P++C+ G +P +L
Sbjct: 10 PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
Query: 62 RE-------------GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGL- 107
+ G+G G GP S PPLP P P GP
Sbjct: 70 VKLEQVLLLPQPHVPGKGAASSPSGSSGPTCGSCCRPPLPRAP----------PVGPSYT 119
Query: 108 -CSP 110
CSP
Sbjct: 120 RCSP 123
>gi|239744919 PREDICTED: hypothetical protein XP_002343307 [Homo
sapiens]
Length = 174
Score = 33.9 bits (76), Expect = 0.044
Identities = 30/66 (45%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 48 SGGFIPGTR-PRLCSRE-GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHAD---GNIP 102
SGGF PG+R PR R G GR+G R GPLR +S LP L G+ G A G+
Sbjct: 111 SGGF-PGSRTPRAAERTIGPGRRGAPGRRTGPLRENS-LPVLRPGVGQTGTAPLARGSRG 168
Query: 103 AGPGLC 108
AG C
Sbjct: 169 AGRSPC 174
>gi|239742713 PREDICTED: hypothetical protein [Homo sapiens]
Length = 134
Score = 33.9 bits (76), Expect = 0.044
Identities = 32/124 (25%), Positives = 41/124 (33%), Gaps = 42/124 (33%)
Query: 19 PVPGPISVGPQAAPP------GATVTHPPTKPLICSG-----------GFIPGTRPRLCS 61
P P P+S P P A V PP+ P++C+ G +P +L
Sbjct: 10 PQPHPLSPAPSLLPVEGTSFWAAAVKTPPSPPMLCAAAIATVASSCREGLVPCAAQQLLE 69
Query: 62 RE-------------GEGRKGEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPGL- 107
+ G+G G GP S PPLP P P GP
Sbjct: 70 VKLEQVLLLPQPHVPGKGAASSPSGSSGPTCGSCCRPPLPRAP----------PVGPSYT 119
Query: 108 -CSP 110
CSP
Sbjct: 120 RCSP 123
>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
Length = 417
Score = 33.9 bits (76), Expect = 0.044
Identities = 32/112 (28%), Positives = 40/112 (35%), Gaps = 5/112 (4%)
Query: 10 QRKHVTKHLPVPGPISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEGRKG 69
+RK +H PG P P H P + P P GR+
Sbjct: 200 RRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPAPPQPVPGAYPNTAPGRRP 259
Query: 70 EALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAGPG---LCSPQLLLPGGQ 118
AL PLR LL P + G A+G A P CSP L+L G+
Sbjct: 260 YALLHPHPLR--YLLLSAPVYAGAPKKAEGAALATPAPFPCCSPHLVLSLGR 309
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 33.9 bits (76), Expect = 0.044
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 9/118 (7%)
Query: 24 ISVGPQAAPPGATVTHPPTKPLICSGGFIPGTRPRLCSREGEGRKGEALGRQGPLRSSSL 83
++ G PG+ P SG IP PRL G + R P R +
Sbjct: 117 VAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRL----GNTSEAHGAARTAPPRPNVP 172
Query: 84 LPPLPTWPGREGHADGNIPAGPGLCSPQLLLPG----GQL-FWAPEVLRSPFPGPGTP 136
PP PT P +P+ + +P + PG G L AP V +P P P P
Sbjct: 173 APPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPP 230
>gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo
sapiens]
Length = 468
Score = 33.9 bits (76), Expect = 0.044
Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 19/105 (18%)
Query: 18 LPVPGPISVGPQAAPPGATVTHPP-TKPLICSGGFIPGTRPRLCSREGEGRK-------- 68
+P+ GP P PPGA +H T + + P RPRL S E R+
Sbjct: 162 VPLLGP-EAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPALPVP 220
Query: 69 ---------GEALGRQGPLRSSSLLPPLPTWPGREGHADGNIPAG 104
A GR+G ++ L PP P PG G P G
Sbjct: 221 EAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEG 265
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.142 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,217,310
Number of Sequences: 37866
Number of extensions: 634120
Number of successful extensions: 2435
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 2149
Number of HSP's gapped (non-prelim): 600
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.