Guide to the Human Genome
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Name: ANKRD34C Sequence: fasta or formatted (535aa) NCBI GI: 239745252
Description:

PREDICTED: ankyrin repeat domain 34C

Referenced in:

Ankyrin Family

Other entries for this name:
alt mRNA [535aa] ankyrin repeat domain 34C
alt prot [534aa] PREDICTED: ankyrin repeat domain 34C
alt prot [534aa] PREDICTED: ankyrin repeat domain 34C
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         36           2
 C cysteine            1.3          7           1
 D aspartate           6.9         37           3
 E glutamate           5.0         27           2
 F phenylalanine       1.3          7           2
 G glycine             5.8         31           2
 H histidine           2.4         13           1
 I isoleucine          4.5         24           3
 K lysine              7.9         42           3
 L leucine            12.0         64           3
 M methionine          1.7          9           2
 N asparagine          3.6         19           1
 P proline             8.4         45           2
 Q glutamine           2.8         15           2
 R arginine            6.2         33           3
 S serine             12.1         65           3
 T threonine           5.2         28           2
 V valine              4.3         23           2
 W tryptophan          0.7          4           1
 Y tyrosine            1.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat domain 34C 
ANKRD34C              1.000   ankyrin repeat domain 34C 
ANKRD34C              0.998   PREDICTED: ankyrin repeat domain 34C 
ANKRD34C              0.998   PREDICTED: ankyrin repeat domain 34C 
ANKRD34B              0.333   ankyrin repeat domain 34B 
ANKRD34A              0.307   ankyrin repeat domain 34 
ANKRD35               0.040   ankyrin repeat domain 35 
INVS                  0.038   inversin isoform a 
INVS                  0.038   inversin isoform b 
POTEA                 0.036   POTE ankyrin domain family, member A isoform 1 [Homo...
POTEA                 0.036   POTE ankyrin domain family, member A isoform 2 [Homo...
ANKRD50               0.036   ankyrin repeat domain 50 
FEM1C                 0.035   feminization 1 homolog a 
ANKRD24               0.035   ankyrin repeat domain 24 
POTEB                 0.034   protein expressed in prostate, ovary, testis, and pl...
LOC100287399          0.034   PREDICTED: hypothetical protein XP_002343353 
POTEG                 0.034   POTE ankyrin domain family, member G 
P704P                 0.034   prostate-specific P704P 
POTEH                 0.034   ANKRD26-like family C, member 3 
POTED                 0.034   pote protein 
LOC100288966          0.034   PREDICTED: hypothetical protein XP_002343915 isofor...
LOC100288966          0.034   PREDICTED: hypothetical protein XP_002343914 isofor...
FEM1B                 0.034   fem-1 homolog b 
POTEE                 0.033   protein expressed in prostate, ovary, testis, and p...
POTEF                 0.033   prostate, ovary, testis expressed protein on chromo...
POTEC                 0.033   ANKRD26-like family B, member 2 
ANKRD27               0.033   ankyrin repeat domain 27 (VPS9 domain) 
LOC653781             0.032   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.032   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.032   PREDICTED: similar to protein expressed in prostate,...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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