Guide to the Human Genome
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Name: ANKRD34B Sequence: fasta or formatted (514aa) NCBI GI: 52138747
Description:

ankyrin repeat domain 34B

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         31           1
 C cysteine            1.9         10           1
 D aspartate           5.3         27           2
 E glutamate           6.0         31           3
 F phenylalanine       1.9         10           1
 G glycine             5.3         27           2
 H histidine           3.1         16           1
 I isoleucine          5.3         27           3
 K lysine              7.8         40           3
 L leucine            11.5         59           3
 M methionine          1.9         10           1
 N asparagine          4.7         24           2
 P proline             7.2         37           2
 Q glutamine           4.9         25           2
 R arginine            3.5         18           2
 S serine             11.3         58           2
 T threonine           5.6         29           2
 V valine              4.7         24           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 34B 
ANKRD34C              0.346   ankyrin repeat domain 34C 
ANKRD34C              0.346   PREDICTED: ankyrin repeat domain 34C 
ANKRD34C              0.346   PREDICTED: ankyrin repeat domain 34C 
ANKRD34C              0.346   PREDICTED: ankyrin repeat domain 34C 
ANKRD34A              0.241   ankyrin repeat domain 34 
RAI14                 0.044   retinoic acid induced 14 isoform d 
RAI14                 0.044   retinoic acid induced 14 isoform c 
RAI14                 0.044   retinoic acid induced 14 isoform b 
RAI14                 0.044   retinoic acid induced 14 isoform a 
RAI14                 0.044   retinoic acid induced 14 isoform a 
RAI14                 0.044   retinoic acid induced 14 isoform a 
MIB1                  0.040   mindbomb homolog 1 
FEM1C                 0.037   feminization 1 homolog a 
ANKRD35               0.037   ankyrin repeat domain 35 
ANKS6                 0.037   ankyrin repeat and sterile alpha motif domain contai...
KIDINS220             0.037   kinase D-interacting substrate of 220 kDa 
UACA                  0.036   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.036   uveal autoantigen with coiled-coil domains and ankyr...
ANKRD27               0.036   ankyrin repeat domain 27 (VPS9 domain) 
EHMT1                 0.034   euchromatic histone-lysine N-methyltransferase 1 is...
ANKRD24               0.034   ankyrin repeat domain 24 
TANC1                 0.034   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.034   tetratricopeptide repeat, ankyrin repeat and coiled...
ASZ1                  0.033   ankyrin repeat, SAM and basic leucine zipper domain ...
ANKRD17               0.033   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.033   ankyrin repeat domain protein 17 isoform b 
TANC2                 0.033   tetratricopeptide repeat, ankyrin repeat and coiled...
POTEH                 0.032   ANKRD26-like family C, member 3 
POTEC                 0.032   ANKRD26-like family B, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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