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Search of human proteins with 239745235
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745235 PREDICTED: hypothetical protein [Homo sapiens]
(664 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] 1317 0.0
gi|239756347 PREDICTED: similar to taste receptor protein 1 [Hom... 829 0.0
gi|239750872 PREDICTED: similar to taste receptor protein 1 [Hom... 829 0.0
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 52 1e-06
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 51 4e-06
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 51 4e-06
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 51 4e-06
gi|50428940 mediator complex subunit 25 [Homo sapiens] 51 4e-06
gi|57242793 interphotoreceptor matrix proteoglycan 2 [Homo sapiens] 50 9e-06
gi|7706501 WW domain binding protein 11 [Homo sapiens] 48 3e-05
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 47 6e-05
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 47 6e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 47 6e-05
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 47 7e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 45 2e-04
gi|148536848 carboxyl ester lipase precursor [Homo sapiens] 45 2e-04
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 45 2e-04
gi|42475941 zinc finger protein 261 [Homo sapiens] 45 2e-04
gi|4827067 zinc finger protein 261 [Homo sapiens] 45 2e-04
gi|49472835 bridging integrator 2 [Homo sapiens] 44 5e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 6e-04
gi|215599585 integrator complex subunit 12 [Homo sapiens] 44 6e-04
gi|21361851 integrator complex subunit 12 [Homo sapiens] 44 6e-04
gi|153281158 dual specificity phosphatase 8 [Homo sapiens] 44 6e-04
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int... 43 8e-04
gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens] 43 8e-04
gi|33946327 nucleoporin 214kDa [Homo sapiens] 43 0.001
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 43 0.001
gi|60460889 Myb protein P42POP [Homo sapiens] 43 0.001
gi|163965366 nascent polypeptide-associated complex alpha subuni... 43 0.001
>gi|239745235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 664
Score = 1317 bits (3409), Expect = 0.0
Identities = 664/664 (100%), Positives = 664/664 (100%)
Query: 1 MGVQWLLAAGILLAALWMVSASALNLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILP 60
MGVQWLLAAGILLAALWMVSASALNLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILP
Sbjct: 1 MGVQWLLAAGILLAALWMVSASALNLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILP 60
Query: 61 AIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAP 120
AIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAP
Sbjct: 61 AIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAP 120
Query: 121 PGPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGP 180
PGPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGP
Sbjct: 121 PGPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGP 180
Query: 181 SPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLN 240
SPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLN
Sbjct: 181 SPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLN 240
Query: 241 PASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAVNASLVFGGRAPGPSPCE 300
PASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAVNASLVFGGRAPGPSPCE
Sbjct: 241 PASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAVNASLVFGGRAPGPSPCE 300
Query: 301 LLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARETISIRFTAMRSFLPQLLVPGS 360
LLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARETISIRFTAMRSFLPQLLVPGS
Sbjct: 301 LLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARETISIRFTAMRSFLPQLLVPGS 360
Query: 361 VSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQWVGVYIEYKFQTPITTHLQGL 420
VSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQWVGVYIEYKFQTPITTHLQGL
Sbjct: 361 VSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQWVGVYIEYKFQTPITTHLQGL 420
Query: 421 ANHLAQNITDPILQKSSIVANGEKAELVLYEVWLQILVQPYTKALEDKTSPDCDPLHPLL 480
ANHLAQNITDPILQKSSIVANGEKAELVLYEVWLQILVQPYTKALEDKTSPDCDPLHPLL
Sbjct: 421 ANHLAQNITDPILQKSSIVANGEKAELVLYEVWLQILVQPYTKALEDKTSPDCDPLHPLL 480
Query: 481 TPQLNFILRPLQNFDQVVVEEFPPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAE 540
TPQLNFILRPLQNFDQVVVEEFPPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAE
Sbjct: 481 TPQLNFILRPLQNFDQVVVEEFPPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAE 540
Query: 541 GLLVEMVIPDLGTPSPEVSSPLDASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQ 600
GLLVEMVIPDLGTPSPEVSSPLDASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQ
Sbjct: 541 GLLVEMVIPDLGTPSPEVSSPLDASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQ 600
Query: 601 RGETGTGGRPASNQRQVGRKQISCLTFLSYLPQAEEKGQPPIRPLPTLKPLKPGPNRFLD 660
RGETGTGGRPASNQRQVGRKQISCLTFLSYLPQAEEKGQPPIRPLPTLKPLKPGPNRFLD
Sbjct: 601 RGETGTGGRPASNQRQVGRKQISCLTFLSYLPQAEEKGQPPIRPLPTLKPLKPGPNRFLD 660
Query: 661 TGLK 664
TGLK
Sbjct: 661 TGLK 664
>gi|239756347 PREDICTED: similar to taste receptor protein 1 [Homo
sapiens]
Length = 562
Score = 829 bits (2141), Expect = 0.0
Identities = 427/455 (93%), Positives = 428/455 (94%), Gaps = 18/455 (3%)
Query: 221 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 280
MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS
Sbjct: 1 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 60
Query: 281 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 340
VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET
Sbjct: 61 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 120
Query: 341 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 400
ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW
Sbjct: 121 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 180
Query: 401 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVAN------------------G 442
VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVAN G
Sbjct: 181 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG 240
Query: 443 EKAELVLYEVWLQILVQPYTKALEDKTSPDCDPLHPLLTPQLNFILRPLQNFDQVVVEEF 502
EKAELVLYEVWLQILVQPYTKALEDKTSP+ L LT LNFILRPLQNFDQVVVEEF
Sbjct: 241 EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF 300
Query: 503 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 562
PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL
Sbjct: 301 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 360
Query: 563 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 622
DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI
Sbjct: 361 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 420
Query: 623 SCLTFLSYLPQAEEKGQPPIRPLPTLKPLKPGPNR 657
SCLTFLS LPQAEEKGQPPIRPLPTLKPLKPGPNR
Sbjct: 421 SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNR 455
>gi|239750872 PREDICTED: similar to taste receptor protein 1 [Homo
sapiens]
Length = 562
Score = 829 bits (2141), Expect = 0.0
Identities = 427/455 (93%), Positives = 428/455 (94%), Gaps = 18/455 (3%)
Query: 221 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 280
MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS
Sbjct: 1 MTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGS 60
Query: 281 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 340
VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET
Sbjct: 61 VAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSDGADLITLARET 120
Query: 341 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 400
ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW
Sbjct: 121 ISIRFTAMRSFLPQLLVPGSVSFVLLERQILQQVTPVVSGFYKASPQERPLLLFSNADQW 180
Query: 401 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVAN------------------G 442
VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVAN G
Sbjct: 181 VGVYIEYKFQTPITTHLQGLANHLAQNITDPILQKSSIVANGLPGEGMQADATSTPITLG 240
Query: 443 EKAELVLYEVWLQILVQPYTKALEDKTSPDCDPLHPLLTPQLNFILRPLQNFDQVVVEEF 502
EKAELVLYEVWLQILVQPYTKALEDKTSP+ L LT LNFILRPLQNFDQVVVEEF
Sbjct: 241 EKAELVLYEVWLQILVQPYTKALEDKTSPEFWALQGQLTRWLNFILRPLQNFDQVVVEEF 300
Query: 503 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 562
PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL
Sbjct: 301 PPEPLTARMGATFFRAAPAQALMWDRLRQGLHTLGKAEGLLVEMVIPDLGTPSPEVSSPL 360
Query: 563 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 622
DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI
Sbjct: 361 DASIPCYAVALLILGLLLVTLALVLEIRRAVQPPMHLQRGETGTGGRPASNQRQVGRKQI 420
Query: 623 SCLTFLSYLPQAEEKGQPPIRPLPTLKPLKPGPNR 657
SCLTFLS LPQAEEKGQPPIRPLPTLKPLKPGPNR
Sbjct: 421 SCLTFLSCLPQAEEKGQPPIRPLPTLKPLKPGPNR 455
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 52.4 bits (124), Expect = 1e-06
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 35 WPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEA 94
+PP+ S S T L + LP + + + +G +P + + S + GD+ A
Sbjct: 1495 FPPTPVTCSPASDESPLTPLEVKKLPVLETNLKYPVQPEGSSPLSPQYSKSQKGDGDRPA 1554
Query: 95 PLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRT--PESQPVSSVAGLVSGS 152
L+L + S +A P T P PPGP P+ P AH PE PV++
Sbjct: 1555 SPGLALFNGSGRASPPSTP-PPPPPPPGPPPAPYR-PCAHLAFPPEPAPVNA-------G 1605
Query: 153 VAGPAEEMLVPGSPEIAAPLPPSASL-GPSPSSPRVP 188
AGP+ E +P++ P P SA + GP S P++P
Sbjct: 1606 KAGPSAE-----APKV-HPKPNSAPVAGPCSSFPKIP 1636
Score = 30.4 bits (67), Expect = 5.5
Identities = 35/135 (25%), Positives = 50/135 (37%), Gaps = 21/135 (15%)
Query: 69 SAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSAL 128
S + PS R + P+ D L+ S ++ S A S A P P +
Sbjct: 1282 SMDDSSSLPSPRKQP-PPKPKRDPNTRLSASYEAVS--ACLSAAREAANEALARPRPHSD 1338
Query: 129 AWPTAHRTPESQPVSSVAGLVSGS----------------VAGPAEEMLVPGSPEIAAPL 172
+ T + P +P S +SGS G A +L PG+P+ A L
Sbjct: 1339 DYSTMKKIPPRKPKRSPNTKLSGSYEEISGSRPGDARPAGAPGAAARVLTPGTPQCA--L 1396
Query: 173 PPSASLGPSPSSPRV 187
PP+A G S V
Sbjct: 1397 PPAAPPGDEDDSEPV 1411
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 50.8 bits (120), Expect = 4e-06
Identities = 63/234 (26%), Positives = 91/234 (38%), Gaps = 29/234 (12%)
Query: 48 NSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQA 107
+S TL +N PA D + P+ + + PE + P A + S A
Sbjct: 149 SSVATLAPVNS-PAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSA 207
Query: 108 VPSGTAGVPGRAPPGPAPSALAWPTAHRTPE---SQPVSSVAGLVSGSVAGPAEEMLVPG 164
P TA APP P + A P++ PE + P S S + P E VP
Sbjct: 208 PPETTA-----APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Query: 165 SPEIAAPLPPSASL---------GPSPSSPRVPGGADPIQSSALPY----RSQTFSFQDS 211
+P P SAS PS ++P P P +++A P S T D+
Sbjct: 263 TPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDT 322
Query: 212 VSSTPGPSHM-TRSVT--FTITNEAFSAALLNPAS----WKHQLLRKIIHHQLQ 258
++ P+H T SVT T T + SA N S + LL +II ++
Sbjct: 323 SETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNRIIDDMVE 376
Score = 39.7 bits (91), Expect = 0.009
Identities = 50/220 (22%), Positives = 78/220 (35%), Gaps = 26/220 (11%)
Query: 25 NLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEAL 84
N P +P PP P ++ N TL++ +P++ + ST+ L
Sbjct: 79 NNPPKFPNPHQPPKHPDKNSSVVNP--TLVATTQIPSVTF----------PSASTKITTL 126
Query: 85 SPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSS 144
Q A ++ S + S A + P P + A PT T + P SS
Sbjct: 127 PNVTFLPQNAT---TISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSS 183
Query: 145 VAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGP-SPSSPRVPGGADPIQSSALPYRS 203
P E P +P PPS+S P + ++P P P S+
Sbjct: 184 ----------APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPE 233
Query: 204 QTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLNPAS 243
T + ++TP P + T SA L+P+S
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSS 273
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 50.8 bits (120), Expect = 4e-06
Identities = 63/234 (26%), Positives = 91/234 (38%), Gaps = 29/234 (12%)
Query: 48 NSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQA 107
+S TL +N PA D + P+ + + PE + P A + S A
Sbjct: 149 SSVATLAPVNS-PAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSA 207
Query: 108 VPSGTAGVPGRAPPGPAPSALAWPTAHRTPE---SQPVSSVAGLVSGSVAGPAEEMLVPG 164
P TA APP P + A P++ PE + P S S + P E VP
Sbjct: 208 PPETTA-----APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Query: 165 SPEIAAPLPPSASL---------GPSPSSPRVPGGADPIQSSALPY----RSQTFSFQDS 211
+P P SAS PS ++P P P +++A P S T D+
Sbjct: 263 TPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDT 322
Query: 212 VSSTPGPSHM-TRSVT--FTITNEAFSAALLNPAS----WKHQLLRKIIHHQLQ 258
++ P+H T SVT T T + SA N S + LL +II ++
Sbjct: 323 SETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNRIIDDMVE 376
Score = 39.7 bits (91), Expect = 0.009
Identities = 50/220 (22%), Positives = 78/220 (35%), Gaps = 26/220 (11%)
Query: 25 NLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEAL 84
N P +P PP P ++ N TL++ +P++ + ST+ L
Sbjct: 79 NNPPKFPNPHQPPKHPDKNSSVVNP--TLVATTQIPSVTF----------PSASTKITTL 126
Query: 85 SPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSS 144
Q A ++ S + S A + P P + A PT T + P SS
Sbjct: 127 PNVTFLPQNAT---TISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSS 183
Query: 145 VAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGP-SPSSPRVPGGADPIQSSALPYRS 203
P E P +P PPS+S P + ++P P P S+
Sbjct: 184 ----------APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPE 233
Query: 204 QTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLNPAS 243
T + ++TP P + T SA L+P+S
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSS 273
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 50.8 bits (120), Expect = 4e-06
Identities = 63/234 (26%), Positives = 91/234 (38%), Gaps = 29/234 (12%)
Query: 48 NSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQA 107
+S TL +N PA D + P+ + + PE + P A + S A
Sbjct: 149 SSVATLAPVNS-PAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSA 207
Query: 108 VPSGTAGVPGRAPPGPAPSALAWPTAHRTPE---SQPVSSVAGLVSGSVAGPAEEMLVPG 164
P TA APP P + A P++ PE + P S S + P E VP
Sbjct: 208 PPETTA-----APPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Query: 165 SPEIAAPLPPSASL---------GPSPSSPRVPGGADPIQSSALPY----RSQTFSFQDS 211
+P P SAS PS ++P P P +++A P S T D+
Sbjct: 263 TPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDT 322
Query: 212 VSSTPGPSHM-TRSVT--FTITNEAFSAALLNPAS----WKHQLLRKIIHHQLQ 258
++ P+H T SVT T T + SA N S + LL +II ++
Sbjct: 323 SETSAAPTHQTTTSVTTQTTTTKQPTSAPGQNKISRFLLYMKNLLNRIIDDMVE 376
Score = 39.7 bits (91), Expect = 0.009
Identities = 50/220 (22%), Positives = 78/220 (35%), Gaps = 26/220 (11%)
Query: 25 NLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEAL 84
N P +P PP P ++ N TL++ +P++ + ST+ L
Sbjct: 79 NNPPKFPNPHQPPKHPDKNSSVVNP--TLVATTQIPSVTF----------PSASTKITTL 126
Query: 85 SPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSS 144
Q A ++ S + S A + P P + A PT T + P SS
Sbjct: 127 PNVTFLPQNAT---TISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSS 183
Query: 145 VAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGP-SPSSPRVPGGADPIQSSALPYRS 203
P E P +P PPS+S P + ++P P P S+
Sbjct: 184 ----------APPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPE 233
Query: 204 QTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLNPAS 243
T + ++TP P + T SA L+P+S
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSS 273
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 50.8 bits (120), Expect = 4e-06
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 28/230 (12%)
Query: 36 PPSAPGTSALQGNSKKTLLSLNI---LPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQ 92
PP+AP + L ++ L + +P + ++A+ EA + L P S
Sbjct: 248 PPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFS--- 304
Query: 93 EAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLVSGS 152
P+ ++ P A P + PPGP P A + P + S V+ + GS
Sbjct: 305 --PITPLQQAAPGVGPPFSQAPAP-QLPPGP-------PGAPKPPPASQPSLVSTVAPGS 354
Query: 153 VAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVP--GGADPIQSSALPYRSQTFSFQD 210
P + PG+P +A + P GPSP+ P GG + + L + S +Q+
Sbjct: 355 GLAPTAQ---PGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAW-SGVLEWQE 410
Query: 211 --SVSSTPGPSHMTRSVTFTI-TNEAFSAALLNPASWKHQLLRKIIHHQL 257
+S + +TRS+ + N + L W +L+ ++I QL
Sbjct: 411 KPKPASVDANTKLTRSLPCQVYVNHGEN---LKTEQWPQKLIMQLIPQQL 457
>gi|57242793 interphotoreceptor matrix proteoglycan 2 [Homo sapiens]
Length = 1241
Score = 49.7 bits (117), Expect = 9e-06
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 7/151 (4%)
Query: 210 DSVSSTPGPSHMTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQ 269
D +S T + + +TN FS L N S +++ L + L P GFQ
Sbjct: 888 DDLSYTQTSGALVVFFSLRVTNMMFSEDLFNKNSLEYKALEQRFLELLVPYLQSNLTGFQ 947
Query: 270 GIGVLVFRPGSVAVNASLVFGGRAPGPSPCELLWALYRKVKTSGHMLGNLSLAENSLTSD 329
+ +L FR GS+ VN+ + F P P+ ++ + T+ + NL++ + SL +
Sbjct: 948 NLEILNFRNGSIVVNSRMKFANSVP-PNVNNAVYMILEDFCTTAYNTMNLAIDKYSLDVE 1006
Query: 330 GADLITLARETISIRFTAMRSFLPQLLVPGS 360
D E +F A F L+ P S
Sbjct: 1007 SGD------EANPCKFQACNEFSECLVNPWS 1031
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 48.1 bits (113), Expect = 3e-05
Identities = 43/165 (26%), Positives = 59/165 (35%), Gaps = 14/165 (8%)
Query: 40 PGTSALQGNSKKTLLSLNILPAIVDGVSLSAERK-----------GEAPSTRAEALSPEV 88
PG S + + K L L + + G + E + ++ + AE S +
Sbjct: 314 PGKSRKKKKNMKELTPLQAMMLRMAGQEIPEEGREVEEFSEDDDEDDSDDSEAEKQSQKQ 373
Query: 89 SGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGL 148
++ S SS QA P +APP P P L P A P +P GL
Sbjct: 374 HKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPA---PPLRPPGPPTGL 430
Query: 149 VSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADP 193
G G + PG P + PLP GP P P P P
Sbjct: 431 PPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPP 475
Score = 30.4 bits (67), Expect = 5.5
Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 5/111 (4%)
Query: 109 PSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLV---SGSVAGPAEEMLVPGS 165
P G P PPGP P P P P + G+ G + P L P
Sbjct: 460 PGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAP 519
Query: 166 PEI--AAPLPPSASLGPSPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSS 214
P + APLP L P+ + P D ++ + T S + +++
Sbjct: 520 PGLFPPAPLPNPGVLSAPPNLIQRPKADDTSAATIEKKATATISAKPQITN 570
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 47.0 bits (110), Expect = 6e-05
Identities = 52/191 (27%), Positives = 72/191 (37%), Gaps = 30/191 (15%)
Query: 31 KDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSG 90
+DP WPP P Q LS+ P + A + PS E +S
Sbjct: 765 QDPNWPPPPPPAPEEQD------LSMADFPPPEEAFFSVASPEPAGPSGSPELVS----- 813
Query: 91 DQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLVS 150
+P A S +++ Q P G+ P APP PAP++ A + P+ +PV G
Sbjct: 814 ---SPAASSSSATALQIQPPGSPDPPP-APPAPAPASSAPGHVAKLPQKEPVGCSKG--- 866
Query: 151 GSVAGPAEEMLVPGSPEIAAPL-PPSASLGPSPSSPRVPGGA-DPIQSSALPYRSQTFSF 208
GP E ++ APL PS S PGGA P + P + +
Sbjct: 867 ---GGPPRE-------DVGAPLVTPSLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRAL 916
Query: 209 QDSVSSTPGPS 219
S P PS
Sbjct: 917 SGRASPVPAPS 927
Score = 38.5 bits (88), Expect = 0.020
Identities = 48/172 (27%), Positives = 67/172 (38%), Gaps = 36/172 (20%)
Query: 63 VDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVP---GRA 119
V G+S R+ P + LSP SG S S + P G AG P G+A
Sbjct: 559 VPGLSPGGSRR--PPRSPERTLSPS-SG-------YSSQSGTPTLPPKGLAGPPASPGKA 608
Query: 120 PPGPAPSALAWPTAHRTPESQPVSSVAGLVSGSV-------AGP------AEEMLVPGSP 166
P P P + T+ R+P + SS+ L S S +GP + ++P P
Sbjct: 609 QP-PKPERV---TSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHP 664
Query: 167 EIAAPLPPSASLGPSPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSSTPGP 218
++ AP P PS PR P A P ++ + S S P P
Sbjct: 665 KVPAPF------SPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTP 710
Score = 32.3 bits (72), Expect = 1.4
Identities = 31/112 (27%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 73 KGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSG---------------TAGVPG 117
KG +SPE D + L L S S+Q P + GVP
Sbjct: 976 KGSRKLQLERPVSPETQADLQRNLVAELRSISEQRPPQAPKKSPKAPPPVARKPSVGVPP 1035
Query: 118 RAPPG-PAPSALAWPTAHRTPESQPVSSVAGLVSGSV---AGPAEEMLVPGS 165
A P P L P + P +Q + +G V GP E+M +PGS
Sbjct: 1036 PASPSYPRAEPLTAPPTNGLPHTQDRTKRELAENGGVLQLVGPEEKMGLPGS 1087
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 47.0 bits (110), Expect = 6e-05
Identities = 57/202 (28%), Positives = 76/202 (37%), Gaps = 26/202 (12%)
Query: 27 PSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSP 86
P + PG PP +P S + N LP +V APS E
Sbjct: 1510 PPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLV--------LPPPAPSVDVE--DG 1559
Query: 87 EVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPS-----------ALAWPTAHR 135
E + P L +S ++ T G P P PAP+ A A PT
Sbjct: 1560 EFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPLPPVPPPAVAAAPPTLDS 1619
Query: 136 TPESQPV--SSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADP 193
T S S VA L G+ A P + PG P AAP P + GP P P G +
Sbjct: 1620 TASSLTSYDSEVATLTQGASAAPGDPH-PPGPPAPAAPAPAAPQPGPDP-PPGTDSGIEE 1677
Query: 194 IQS-SALPYRSQTFSFQDSVSS 214
+ S S+ + +T S ++SS
Sbjct: 1678 VDSRSSSDHPLETISSASTLSS 1699
Score = 35.0 bits (79), Expect = 0.22
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 17/98 (17%)
Query: 123 PAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSP 182
P P L + + PES P++ GP + P +P A PLPP P P
Sbjct: 1566 PLPPPLEFSNSFEKPES-PLTP----------GPPHPL--PDTPAPATPLPPV----PPP 1608
Query: 183 SSPRVPGGADPIQSSALPYRSQTFSFQDSVSSTPGPSH 220
+ P D SS Y S+ + S+ PG H
Sbjct: 1609 AVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPH 1646
Score = 33.5 bits (75), Expect = 0.65
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 83 ALSPEVSGDQEAPLALSLDSSSDQA-VPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQP 141
A SP + P A++ S + +P+ P + G + + P +QP
Sbjct: 1129 APSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQG---SSTEAEPPTQP 1185
Query: 142 VSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGAD 192
+ G GS PA M +P+PPS S P+P+SP P D
Sbjct: 1186 EPTGGGGGGGSSPSPAPAM---------SPVPPSPSPVPTPASPSGPATLD 1227
Score = 31.6 bits (70), Expect = 2.5
Identities = 48/168 (28%), Positives = 57/168 (33%), Gaps = 16/168 (9%)
Query: 77 PSTRAEALSPEVSGDQEAPLALSLDSSS--DQAVPSGTAGVPGRAPPGPAPSALAWPTAH 134
PS R +P G A S D S D V S + P PA H
Sbjct: 947 PSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHH 1006
Query: 135 RTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADPI 194
P QP A EM GSP+ PP +LGP PS GG P
Sbjct: 1007 HAPPPQPHHHHAH------PPHPPEMETGGSPDDP---PPRLALGPQPSLRGWRGGG-PS 1056
Query: 195 QSSALPYRSQTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLNPA 242
+ P S S S+ GP+ F + A SAA+ PA
Sbjct: 1057 PTPGAPSPSHHGSAGGGGGSSQGPALR----YFQLPPRAASAAMYVPA 1100
Score = 31.2 bits (69), Expect = 3.2
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 12/116 (10%)
Query: 75 EAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAH 134
E+P A P +G P L +S + A+P + PG A S PT+
Sbjct: 412 ESPKYAARRRGPPGTGLTVPPALLRANSDTSMALPDWMVF----SAPGAASSGAPGPTSG 467
Query: 135 RTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGG 190
+SQP + L SG++ + SP A PS P + R P G
Sbjct: 468 SQGQSQPSAPTTKLSSGTLRSAS-------SPRGARARSPSRGRHPE-DAKRQPRG 515
Score = 30.4 bits (67), Expect = 5.5
Identities = 38/151 (25%), Positives = 47/151 (31%), Gaps = 45/151 (29%)
Query: 112 TAGVPGRAPP----GPAPSALAWPTAHRTPESQPVS----SVAGLVSGSVAGPA------ 157
T G P PP GP PS W +P S AG GS GPA
Sbjct: 1028 TGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQL 1087
Query: 158 ------------------------EEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADP 193
++ V G P+ LPP+ PSP+SP P P
Sbjct: 1088 PPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPA----PSPTSPASP---QP 1140
Query: 194 IQSSALPYRSQTFSFQDSVSSTPGPSHMTRS 224
+ A P + + P S RS
Sbjct: 1141 PPAVAAPSEKNSIPIPTIIIKAPSTSSSGRS 1171
Score = 30.4 bits (67), Expect = 5.5
Identities = 34/105 (32%), Positives = 42/105 (40%), Gaps = 23/105 (21%)
Query: 114 GVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLVSGSVA-----GPAEEMLVPG---- 164
G G PGP+ L P TP S VS G +A GP + G
Sbjct: 1763 GASGGLRPGPS-GGLRDPV---TPTSPTVSVTGAGTDGLLALRACSGPPTAGVAGGPVAV 1818
Query: 165 SPEIA-APLPPSASL---------GPSPSSPRVPGGADPIQSSAL 199
PE+ PLP ++SL GP P P +PG Q+SAL
Sbjct: 1819 EPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASAL 1863
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 47.0 bits (110), Expect = 6e-05
Identities = 47/130 (36%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Query: 69 SAERKGEAPS-TRAEALSPEVS---GDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPA 124
S RKG +PS + EA SP+ + P A SSS V G + P R P+
Sbjct: 658 SKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQT-SSSPPPVRRGASSSPQRRQ-SPS 715
Query: 125 PSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAA---PLPPSASLGPS 181
PS RTPE + + A SV + V GSPE AA P PPS S
Sbjct: 716 PSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQS 775
Query: 182 PS---SPRVP 188
PS SP VP
Sbjct: 776 PSTNWSPAVP 785
>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
Length = 669
Score = 46.6 bits (109), Expect = 7e-05
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
Query: 86 PEVSGD--QEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVS 143
PE GD ++ PL S+S+ ++P+ AG R P P A P
Sbjct: 372 PEFFGDLPRKPPLP---SSASESSLPAAVAGFSSRHPLSPGFGAAGTPRWRS-------- 420
Query: 144 SVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADPIQSSALP 200
GLV A P L P P PLPP++SLG P+ P +P G +QS P
Sbjct: 421 --GGLVHSGGARPG---LRPSHPPRRRPLPPASSLGHPPAKPPLPPGPVDMQSFRRP 472
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 45.4 bits (106), Expect = 2e-04
Identities = 45/138 (32%), Positives = 58/138 (42%), Gaps = 14/138 (10%)
Query: 73 KGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPG-----RAPPGPAPSA 127
+GEA +SP+ Q P + + + VP G P PP +P
Sbjct: 1215 EGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKP 1274
Query: 128 LAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSA--SLGPSPSSP 185
PTA + PV +VAGL SGS AGP+ P A PP SLG SP+ P
Sbjct: 1275 PPPPTAPK-----PVKAVAGLPSGS-AGPSPAPSPARQPPAALAKPPGTPPSLGASPAKP 1328
Query: 186 RVPGGADPIQSSALPYRS 203
P GA + A P R+
Sbjct: 1329 PSP-GAPALHVPAKPPRA 1345
Score = 35.0 bits (79), Expect = 0.22
Identities = 46/176 (26%), Positives = 65/176 (36%), Gaps = 24/176 (13%)
Query: 74 GEAPSTRAEALSPEVSGDQEAPLA-LSLDSSSDQ-----AVPSGTAGVPGRAPPGPAPSA 127
G AP+T +P++ E P++ SL S +P G G A PGPAP
Sbjct: 796 GPAPATAKVKPTPQLLPPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPP 855
Query: 128 L--AWPTAHRTPES--------QPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSAS 177
+ A PT PE+ + S+ + +E+LVP + A P
Sbjct: 856 VPTAVPTLCLPPEADAEPGRPKKRAHSLNRYAASDSEPERDELLVPAA---AGPYATVQR 912
Query: 178 LGPSPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSSTPGPSHMTRSVTFTITNEA 233
S R P GAD + RSQ+F+ + P P S N A
Sbjct: 913 RVGRSHSVRAPAGADKNVN-----RSQSFAVRPRKKGPPPPPPKRSSSALASANLA 963
Score = 30.0 bits (66), Expect = 7.1
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 12/110 (10%)
Query: 74 GEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGV-----PGRAPP------- 121
G RA P VS P + +PSG+AG P R PP
Sbjct: 1256 GSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPP 1315
Query: 122 GPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAP 171
G PS A P +P + + A + A A P PE A+P
Sbjct: 1316 GTPPSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASP 1365
>gi|148536848 carboxyl ester lipase precursor [Homo sapiens]
Length = 756
Score = 45.4 bits (106), Expect = 2e-04
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 16/148 (10%)
Query: 59 LPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGR 118
LP + D + G++ +T P + AP+ + DS + P+G +G P
Sbjct: 552 LPTVTDQEATPVPPTGDSEATPV----PPTGDSETAPVPPTGDSGAPPVPPTGDSGAPPV 607
Query: 119 APPGPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVP-----GSPEI----- 168
P G + + PT P + +G G + VP G+P +
Sbjct: 608 PPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGD 667
Query: 169 --AAPLPPSASLGPSPSSPRVPGGADPI 194
A P+PP+ GP P P GA P+
Sbjct: 668 SGAPPVPPTGDAGPPPVPPTGDSGAPPV 695
Score = 34.3 bits (77), Expect = 0.38
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 89 SGDQEAP-LALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAG 147
+GD AP + + DS + P+G +G P P G A PT P + +G
Sbjct: 643 TGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAGPPPVPPTGDSGAPPVPPTGDSG 702
Query: 148 LVSGSVAGPAEEMLVPGSPEIAA-PLPPSASLGPSPSSP 185
+ G +E VP + + A P+PP+ +P P
Sbjct: 703 APPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEAAPVPP 741
Score = 33.5 bits (75), Expect = 0.65
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 89 SGDQEAP-LALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAG 147
+GD AP + + DS + P+G +G P P G + + PT P + AG
Sbjct: 621 TGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDSGAPPVPPTGDAG 680
Query: 148 LVSGSVAGPAEEMLVP-----GSPEI-------AAPLPPSASLGPSPSSPRVPGGADPI 194
G + VP G+P + AP+PP+ G P P A P+
Sbjct: 681 PPPVPPTGDSGAPPVPPTGDSGAPPVTPTGDSETAPVPPTGDSGAPPVPPTGDSEAAPV 739
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 45.4 bits (106), Expect = 2e-04
Identities = 60/213 (28%), Positives = 86/213 (40%), Gaps = 27/213 (12%)
Query: 40 PGTSALQGNSKKTLLSLNILPAIVDGVSLSAE-RKGEAPSTRAEALSPEVSGDQEAPLAL 98
PGTS L S+ LS + P I G+ S E +T S E P A
Sbjct: 100 PGTSVLPTPSEG--LSTSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSVPPTAS 157
Query: 99 SLDSSSDQAVPS-GTA-GVPGRAPPGPA----------PSALAWPTAHRTP-ESQPVSSV 145
+ S+S P GT+ VP A GP+ PS PT P S P+++
Sbjct: 158 EVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGTSVPLAAT 217
Query: 146 AGLVSGSVA----GPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADPIQSSALPY 201
GL + A GP+ + + ++ P+PP+ GPS S P PG + +S LP
Sbjct: 218 EGLSTSVQATPDEGPSTSVPPTATEGLSTPVPPTRDEGPSTSVPATPG--EGPSTSVLPA 275
Query: 202 RSQTFSF-----QDSVSSTPGPSHMTRSVTFTI 229
S S + SST P T ++ ++
Sbjct: 276 ASDGQSISLVPTRGKGSSTSVPPTATEGLSTSV 308
Score = 38.1 bits (87), Expect = 0.026
Identities = 57/205 (27%), Positives = 75/205 (36%), Gaps = 34/205 (16%)
Query: 27 PSTHKDPGWPPSAPGTS----ALQGNSKKTLL------SLNILPAIVDGVSLSAE-RKGE 75
PST P P PGTS A +G S S ++ P +G+S + E
Sbjct: 196 PSTSVLPT-PGEGPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTATEGLSTPVPPTRDE 254
Query: 76 APSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAP--SALAWPTA 133
PST A E G + L + D S VP+ G PP S PTA
Sbjct: 255 GPSTSVPATPGE--GPSTSVLPAASDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTA 312
Query: 134 HRTPESQPVSSVAGLVSGSVAGPAEEML---VPGSPE--------------IAAPLPPSA 176
+ + G +S SV A E L VP +P ++ +PP+A
Sbjct: 313 GEGSSTSVPPTPGGGLSTSVPPTATEELSTSVPPTPGEGPSTSVLPIPGEGLSTSVPPTA 372
Query: 177 SLGPSPSSPRVPG-GADPIQSSALP 200
S G S P PG GA + P
Sbjct: 373 SDGSDTSVPPTPGEGASTLVQPTAP 397
>gi|42475941 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 45.4 bits (106), Expect = 2e-04
Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 36/191 (18%)
Query: 34 GWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKG---EAPSTRAEALSPEVSG 90
GW P P S+ + T L P ++DG + G +APS PEV
Sbjct: 44 GWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPS------PPEVDH 97
Query: 91 DQEAPLALSLDSSSDQAVPSGTAG-VPGRAPPGP-------APSALAWPTAHRTP----- 137
E LA + DQ + G G P PP P +P L P A +P
Sbjct: 98 GPEGTLAW---DAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQS 154
Query: 138 ---ESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPS-----PSSPRVPG 189
E + +S+A GS P +E +P + PPS S+G + SS PG
Sbjct: 155 PHIEEEETTSIATARRGS---PGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPG 211
Query: 190 GADPIQSSALP 200
G+ P +LP
Sbjct: 212 GSSPPAHPSLP 222
Score = 32.3 bits (72), Expect = 1.4
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 93 EAPLA--LSLDSS-SDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLV 149
E PLA L +D + + S TA G APPGP+PS+ A + + AGL
Sbjct: 17 EKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDL---------LDTPAGLE 67
Query: 150 SG-SVAGPAEEMLVPGSPEIAAPLPPSASLGP 180
V A E+L G AP PP GP
Sbjct: 68 KDPGVLDGATELLGLGGLLYKAPSPPEVDHGP 99
>gi|4827067 zinc finger protein 261 [Homo sapiens]
Length = 1370
Score = 45.4 bits (106), Expect = 2e-04
Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 36/191 (18%)
Query: 34 GWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKG---EAPSTRAEALSPEVSG 90
GW P P S+ + T L P ++DG + G +APS PEV
Sbjct: 44 GWAPPGPSPSSGALDLLDTPAGLEKDPGVLDGATELLGLGGLLYKAPS------PPEVDH 97
Query: 91 DQEAPLALSLDSSSDQAVPSGTAG-VPGRAPPGP-------APSALAWPTAHRTP----- 137
E LA + DQ + G G P PP P +P L P A +P
Sbjct: 98 GPEGTLAW---DAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGLLEPLAPDSPITLQS 154
Query: 138 ---ESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPS-----PSSPRVPG 189
E + +S+A GS P +E +P + PPS S+G + SS PG
Sbjct: 155 PHIEEEETTSIATARRGS---PGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKPG 211
Query: 190 GADPIQSSALP 200
G+ P +LP
Sbjct: 212 GSSPPAHPSLP 222
Score = 32.3 bits (72), Expect = 1.4
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 93 EAPLA--LSLDSS-SDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLV 149
E PLA L +D + + S TA G APPGP+PS+ A + + AGL
Sbjct: 17 EKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDL---------LDTPAGLE 67
Query: 150 SG-SVAGPAEEMLVPGSPEIAAPLPPSASLGP 180
V A E+L G AP PP GP
Sbjct: 68 KDPGVLDGATELLGLGGLLYKAPSPPEVDHGP 99
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 43.9 bits (102), Expect = 5e-04
Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 18/205 (8%)
Query: 28 STHKDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSA----------ERKG-EA 76
+T P P++P T +L+ S+ + ++ P G S E++G EA
Sbjct: 269 ATVSSPLTSPTSPSTLSLKSESESVSATEDLAPDAAQGEDNSEIKELLEEEEIEKEGSEA 328
Query: 77 PSTRAEALSPEVSGDQEAPLALSLD--SSSDQAVPSGTAGVPGRA-PPGPAPSALAWPTA 133
S+ + P +G +A + + + S ++ +PS T PG A P PS+ A
Sbjct: 329 SSSEEDEPLPACNGPAQAQPSPTTERAKSQEEVLPSSTTPSPGGALSPSGQPSSSATEVV 388
Query: 134 HRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADP 193
RT + S + A P A+P P S ++ PSSP GG P
Sbjct: 389 LRTRTASEGSEQPKKRASIQRTSAPPSRPPPPRATASPRPSSGNI---PSSPTASGGGSP 445
Query: 194 IQSSALPYRSQTFSFQDSVSSTPGP 218
A + T S + S+ +P P
Sbjct: 446 TSPRA-SLGTGTASPRTSLEVSPNP 469
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.5 bits (101), Expect = 6e-04
Identities = 60/205 (29%), Positives = 83/205 (40%), Gaps = 31/205 (15%)
Query: 15 ALWMVSASALNLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKG 74
AL +S+S L PS P PPS +LQ TL S P SL +
Sbjct: 286 ALGPLSSSPLATPS----PSAPPSPSAPPSLQ-----TLPSPPATPPSQATTSLGSPTLQ 336
Query: 75 EAPS-TRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTA 133
S + LSP + +AP AL+L P +APP P S P A
Sbjct: 337 ATHSFLPSPPLSPLATPPPQAPPALALP--------------PLQAPPSPPASPPLSPLA 382
Query: 134 HRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADP 193
+P++ +V L + P+ + P SP + P+ PSA+ PS + P + A P
Sbjct: 383 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT-PPSQAPPSL--AAPP 439
Query: 194 IQSSALPYRSQTFSFQDSVSSTPGP 218
+Q P S S S+TP P
Sbjct: 440 LQVPPSPPASPPM----SPSATPPP 460
Score = 41.2 bits (95), Expect = 0.003
Identities = 66/237 (27%), Positives = 90/237 (37%), Gaps = 47/237 (19%)
Query: 13 LAALWMVSASALNLPSTH--KDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSA 70
L+ L S A N + H + P PP +P A +S + P SL+A
Sbjct: 378 LSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 437
Query: 71 ERKGEAPSTRAEA-LSPEVSGDQEAPLALS----------------LDSSSDQAVPSGTA 113
PS A +SP + +AP L+ L + QA+PS A
Sbjct: 438 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPA 497
Query: 114 GVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEM--LVPGSPEIAAP 171
PG+AP P+ S P A P++ PV +A P ++ P SP + AP
Sbjct: 498 SFPGQAPFSPSASLPMSPLATPPPQAPPV----------LAAPLLQVPPSPPASPTLQAP 547
Query: 172 -LPPSASLGPSPSSPRV-----PGGADPIQSSALPYRSQTFSFQD------SVSSTP 216
PP+ S S PR+ PG P S S T S D S +STP
Sbjct: 548 RRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP----SSTLSGPDLAGHSSSATSTP 600
Score = 33.5 bits (75), Expect = 0.65
Identities = 48/183 (26%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 36 PPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAP 95
PPS P + LQ + + V G L+ P + + S +SG A
Sbjct: 535 PPSPPASPTLQAPRRPPTPGPD---TSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAG 591
Query: 96 LALSLDSSSDQ--AVPSGTAGVPGRAPPGPAPSAL----AW------PTAHRTPESQPVS 143
+ S S+ ++ SG G +PP A A AW P A R P+
Sbjct: 592 HSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 651
Query: 144 SVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSP--SSPRVPGGADPIQSSALPY 201
GS G G PE A P P + GPSP S + GA SS P
Sbjct: 652 WPPATGPGSADGLCTIYETEG-PESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPK 710
Query: 202 RSQ 204
+++
Sbjct: 711 QAR 713
Score = 32.7 bits (73), Expect = 1.1
Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 5/177 (2%)
Query: 27 PSTHKDPGWPPSAPGTSA---LQGNSKKTLLSLNILPAIVDGVSLSA-ERKGEAPSTRAE 82
P+ + PG P S+PG ++ G + L ++ + G + A +R + R +
Sbjct: 96 PAKNTSPG-PVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRD 154
Query: 83 ALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPV 142
P A S + ++ +P R P +++ + H T E P
Sbjct: 155 TSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPA 214
Query: 143 SSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADPIQSSAL 199
+ G + PA L + +++P S +P +P P P AL
Sbjct: 215 ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQAL 271
Score = 32.7 bits (73), Expect = 1.1
Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 13/157 (8%)
Query: 66 VSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSS----SDQAVPSGTAGVPGRAPP 121
VS ++E PS A P G + P + SL SS S A +A RAP
Sbjct: 200 VSSASEHSTTEPSPAARR-RPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA 258
Query: 122 GPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSA--SLG 179
P+ A R P+ P A G ++ +P +AP PSA SL
Sbjct: 259 HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP-----LATPSPSAPPSPSAPPSLQ 313
Query: 180 PSPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSSTP 216
PS P P + S P T SF S +P
Sbjct: 314 TLPSPPATP-PSQATTSLGSPTLQATHSFLPSPPLSP 349
>gi|215599585 integrator complex subunit 12 [Homo sapiens]
Length = 462
Score = 43.5 bits (101), Expect = 6e-04
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 56 LNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGV 115
+++ PA+ D + E K + +T EV + +S +SSS S T+G+
Sbjct: 235 VSVTPAVKDPLVKKPETKLKQETTFLAFKRTEV----KTSTVISGNSSSASVSSSVTSGL 290
Query: 116 PGRAP-------PGPAPSALAWPTAHRTPE------SQPVSSVAGLVSGSVAGPAEEMLV 162
G A GP+ + L+ T + T + +Q + GL + S G ++
Sbjct: 291 TGWAAFAAKTSSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGS 350
Query: 163 PGSPEIAAPL--PPSASLGP-----SPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSST 215
S PL PP +LG S S V P SS +P S S + S T
Sbjct: 351 NNSTTPTVPLKPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGN-SGT 409
Query: 216 PGPSHMTRSVTFTITNEAFSAALLNPASWKHQL 248
GPS T S T + ++ + SA+L P S + QL
Sbjct: 410 SGPSGSTTSKTTSESSSSPSASLKGPTSQESQL 442
>gi|21361851 integrator complex subunit 12 [Homo sapiens]
Length = 462
Score = 43.5 bits (101), Expect = 6e-04
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)
Query: 56 LNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGV 115
+++ PA+ D + E K + +T EV + +S +SSS S T+G+
Sbjct: 235 VSVTPAVKDPLVKKPETKLKQETTFLAFKRTEV----KTSTVISGNSSSASVSSSVTSGL 290
Query: 116 PGRAP-------PGPAPSALAWPTAHRTPE------SQPVSSVAGLVSGSVAGPAEEMLV 162
G A GP+ + L+ T + T + +Q + GL + S G ++
Sbjct: 291 TGWAAFAAKTSSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGS 350
Query: 163 PGSPEIAAPL--PPSASLGP-----SPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSST 215
S PL PP +LG S S V P SS +P S S + S T
Sbjct: 351 NNSTTPTVPLKPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGN-SGT 409
Query: 216 PGPSHMTRSVTFTITNEAFSAALLNPASWKHQL 248
GPS T S T + ++ + SA+L P S + QL
Sbjct: 410 SGPSGSTTSKTTSESSSSPSASLKGPTSQESQL 442
>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
Length = 625
Score = 43.5 bits (101), Expect = 6e-04
Identities = 55/177 (31%), Positives = 70/177 (39%), Gaps = 23/177 (12%)
Query: 32 DPGWPPSAPGTSALQGNSKKTLLSLNILP---AIVDGVSLSAERKGEAPSTRAEALSPEV 88
+P PP+ P TSALQ + LS + L + SL + APS R + P
Sbjct: 357 EPPAPPTPPATSALQQGLRGLHLSSDRLQDTNRLKRSFSLDI-KSAYAPSRRPDGPGPPD 415
Query: 89 SGDQEAPLALSLDSSSDQAVPSGTA-GVPGRAPPGP--APSALAWPTAH-RTPESQPVSS 144
G EAP LDS PSG A G+ +P P AP A P R P P S
Sbjct: 416 PG--EAPKLCKLDS------PSGAALGLSSPSPDSPDAAPEARPRPRRRPRPPAGSPARS 467
Query: 145 VAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGG-ADPIQSSALP 200
A + + A + G ++AP P P P PG A P+ S P
Sbjct: 468 PAHSLGLNFGDAARQTPRHGLSALSAPGL------PGPGQPAGPGAWAPPLDSPGTP 518
>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
interacting protein [Homo sapiens]
Length = 1211
Score = 43.1 bits (100), Expect = 8e-04
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 19/156 (12%)
Query: 68 LSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAP-- 125
+ ER+ ++ E +P++ A L L+SS + GT +PPGP+P
Sbjct: 531 IPGERQAGDGTSLPETPNPKMMSAVYAELESRLNSSFKGKM--GTVSKSRASPPGPSPAV 588
Query: 126 -------SALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASL 178
S ++WP+ P L SG +A P+ P + + + PS
Sbjct: 589 TTGPRTLSGVSWPSERLLPS----PCYHPLCSGGLASPSSSESHPYA-SLDSSRAPSPQP 643
Query: 179 GPSPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSS 214
GP P P P DP + P R + F+F V S
Sbjct: 644 GPGPICPDSPPSPDPTRP---PSRRKLFTFSHPVRS 676
>gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens]
Length = 797
Score = 43.1 bits (100), Expect = 8e-04
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 19/211 (9%)
Query: 93 EAP---LALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLV 149
EAP +A S+ S +DQ A PG L PT+ + +S +A +
Sbjct: 446 EAPPFFMASSIFSLTDQGTTDTMATDQTMLVPG-----LTIPTS----DYSAISQLALGI 496
Query: 150 SGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVP------GGADPIQSSALPYRS 203
S A + G ++ L L +P+ VP D P +
Sbjct: 497 SHPPASSDDSRSSAGGEDMVRHLD-EMDLSDTPAPSEVPELSEYVSVPDHFLEDTTPVSA 555
Query: 204 QTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHE 263
+ S++ P + + + N AFS L N +S +++ L + L P
Sbjct: 556 LQYITTSSMTIAPKGRELVVFFSLRVANMAFSNDLFNKSSLEYRALEQQFTQLLVPYLRS 615
Query: 264 AFPGFQGIGVLVFRPGSVAVNASLVFGGRAP 294
GF+ + +L FR GSV VN+ + F P
Sbjct: 616 NLTGFKQLEILNFRNGSVIVNSKMKFAKSVP 646
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 42.7 bits (99), Expect = 0.001
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 66 VSLSAERK----GEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPP 121
+SL ER+ G P+T + +P+ A SL SS A P T + P
Sbjct: 420 LSLEGERQPKSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSP-AAPIATFSL---LPA 475
Query: 122 GPAPSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPG-SPEIAAPLPPS-ASLG 179
G AP+ ++ ++ + SGS + A PG P + +PPS ASL
Sbjct: 476 GGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKA----APGPGPSTFSFVPPSKASLA 531
Query: 180 PSPSSPRVPGGADPIQSSALPYRSQTFSFQDSVSSTPGPS 219
P+P+ A P+ SA + + F+ ++ STP PS
Sbjct: 532 PTPA-------ASPVAPSAASFSFGSSGFKPTLESTPVPS 564
Score = 33.1 bits (74), Expect = 0.84
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 19 VSASALNLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPS 78
VSASA +L + P + P TS K+ +L+ PA+ + + A S
Sbjct: 1510 VSASAASLLEEQQSAQLPQAPPQTS--DSVKKEPVLAQ---PAVSNSGTA-------ASS 1557
Query: 79 TRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTA-GVPGRAPPGPAPSALAWPTAHRTP 137
T ALS E + P + + +AVP ++ VPG+ A + A P A T
Sbjct: 1558 TSLVALSAEAT-----PATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETS 1612
Query: 138 ESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPL---PPSAS-----------LGPSPS 183
+ SS +V+ GP+ E G+ + + PP+AS +PS
Sbjct: 1613 STPIASSTTSIVA---PGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPS 1669
Query: 184 SPRVPGGADPIQSSALPYRSQTFSFQDSVSSTP 216
+ V G + +L + QT S + ++TP
Sbjct: 1670 ATPVFGQVAASTAPSL-FGQQTGSTASTAAATP 1701
Score = 30.4 bits (67), Expect = 5.5
Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 10/156 (6%)
Query: 33 PGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQ 92
P P AP ++ S +L P A + PST A ++ ++
Sbjct: 534 PAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVN---LSEK 590
Query: 93 EAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLVSGS 152
A S SS Q+ P + P + PA S P +H TP S P SSV L S
Sbjct: 591 FTAAATSTPVSSSQSAPPMS---PFSSASKPAASG---PLSHPTPLSAPPSSVP-LKSSV 643
Query: 153 VAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVP 188
+ P+ S + + + S + P + P P
Sbjct: 644 LPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSP 679
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 42.7 bits (99), Expect = 0.001
Identities = 53/203 (26%), Positives = 78/203 (38%), Gaps = 15/203 (7%)
Query: 24 LNLPSTHKDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAER-KGEAPSTRAE 82
+ P+ H PPSA + T L + P+ D + AER +G P + +
Sbjct: 412 IKTPAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADD 471
Query: 83 ALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHR---TPES 139
L S Q PL S S+D + + + G PP A L P+ + P S
Sbjct: 472 NLKTP-SERQLTPLPPSAPPSADDNIKTPAEHLRGPLPPS-ADDNLKTPSERQLTPLPPS 529
Query: 140 QP------VSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADP 193
P + + A + G + A++ L S PLPPSA P + + A+
Sbjct: 530 APPSADDNIKTTAEHLRGPLPPSADDNLKTPSERQLTPLPPSA---PPSADDNIKTPAEH 586
Query: 194 IQSSALPYRSQTFSFQDSVSSTP 216
+Q P R SVSS P
Sbjct: 587 LQFRFHPQRMIISRDLPSVSSLP 609
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 42.7 bits (99), Expect = 0.001
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 115 VPGRAPPGPAPSALAWPTAHR---TPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAP 171
+P PP P P + P A + TPE PVS VA +V G+V ++ P S E AP
Sbjct: 310 LPPPPPPPPPPRPVLPPPAPKVEITPE--PVSVVAAVVDGAVVAARGVIIAPRSEE-GAP 366
Query: 172 LPPSASLGPSPSSP 185
PP A L P S P
Sbjct: 367 RPPPAPLPPHDSPP 380
Score = 32.3 bits (72), Expect = 1.4
Identities = 32/133 (24%), Positives = 42/133 (31%), Gaps = 8/133 (6%)
Query: 76 APSTRAEALSPEVSGDQEAP--------LALSLDSSSDQAVPSGTAGVPGRAPPGPAPSA 127
AP A A P + + P LS D D+ + G + P P
Sbjct: 126 APGAGAGAEEPPAAPSSQPPPPSACPQRYVLSEDRREDRRADTSAHSKAGSSSPEPWARP 185
Query: 128 LAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRV 187
P P + S V P + P P PP A + PSP SP
Sbjct: 186 SCTPQEGGCPRPKERESPPPSALQPVQLPRLALSPPPPAPPLPPPPPLAQVAPSPPSPPP 245
Query: 188 PGGADPIQSSALP 200
P P S++ P
Sbjct: 246 PPRPPPTLSASDP 258
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 42.7 bits (99), Expect = 0.001
Identities = 55/200 (27%), Positives = 68/200 (34%), Gaps = 18/200 (9%)
Query: 36 PPSAPGTSALQGNSKKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEAL--------SPE 87
PPS G+ A K P G + AP+T A L +P
Sbjct: 1016 PPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPS 1075
Query: 88 VSGDQEAPLALSLDSSSDQAVPS--GTAGVPGRAPPGPAPSALAWPT---AHRTPESQPV 142
+ G P A A PS G P PP P LA P A TP + P
Sbjct: 1076 LKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSP-KGGLATPPHKGAPTTPAATPP 1134
Query: 143 SSVAGLVSGSVAG-PAEEMLVPGSPE--IAAPLPPSASLGPSPSSPRVPGG-ADPIQSSA 198
S GL + G P P SP+ +A P P A P+ + P GG A P A
Sbjct: 1135 SPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGA 1194
Query: 199 LPYRSQTFSFQDSVSSTPGP 218
+ T +TP P
Sbjct: 1195 PTTPAATPPSPKGGLATPSP 1214
Score = 42.0 bits (97), Expect = 0.002
Identities = 56/228 (24%), Positives = 73/228 (32%), Gaps = 24/228 (10%)
Query: 10 GILLAALWMVSASALNLPSTHKDPGWPP--SAPGTSALQGNSKKTLLSLNILPAIVDGVS 67
G+ L + S +NLP + P P AP S + KK + PA G+
Sbjct: 877 GVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARAT----PA-PKGIP 931
Query: 68 LSAERKGEA-------PSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPS--GTAGVPGR 118
S KG PS + +P P A A PS G P
Sbjct: 932 ASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAA 991
Query: 119 APPGP-------APSALAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAP 171
PP P +P P A P + + G+ PA P A P
Sbjct: 992 TPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATP 1051
Query: 172 LPPSASLGPSPSSPRVPGG-ADPIQSSALPYRSQTFSFQDSVSSTPGP 218
LP A P+ + P GG A P A + T +TP P
Sbjct: 1052 LPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/123 (30%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 77 PSTRAEALSPEVSGDQEAPLALSLDSSSDQAV---PSGTAGVPGRAPPGPAPSALAWPTA 133
PS + +P G P A P G + P PP P S A P
Sbjct: 994 PSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPL- 1052
Query: 134 HRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPR---VPGG 190
P+ P + A L S GPA L G+P A PPS GP+ SP+ +P
Sbjct: 1053 ---PKGAPTTPAATLPSPK-GGPATPSL-KGAPTPPAATPPSPKGGPATPSPKGAPMPPA 1107
Query: 191 ADP 193
A P
Sbjct: 1108 ATP 1110
Score = 40.8 bits (94), Expect = 0.004
Identities = 30/99 (30%), Positives = 37/99 (37%), Gaps = 9/99 (9%)
Query: 107 AVPSGTAGVPGRAPP--GPAPSALAWPTAHRTPE---SQPVSSVAGLVSGSVAGPAEEML 161
A P G PG PP P P A+ P+ TP + P S S GP
Sbjct: 1315 ATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAA 1374
Query: 162 VPGSPEIAAPLPPSASLGPSPSSPRVPGGADPIQSSALP 200
P A PPS GP+ SP+ DP + +P
Sbjct: 1375 TPSHKGGPAMTPPSPKRGPAIPSPK----GDPTSPAVIP 1409
Score = 39.7 bits (91), Expect = 0.009
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 36/199 (18%)
Query: 27 PSTHKDPGWP---------PSAPGTSALQGNSKKTL-----LSLNILPAIVDGVSLSAER 72
PS+ DP P P AP A + KK + LPA++ S +
Sbjct: 1459 PSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPS---SPKE 1515
Query: 73 KGEAPSTRAEALSPEVSG-DQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWP 131
PS+R + ++P + ++ P L+ + P+ T P + P P P
Sbjct: 1516 VPATPSSRRDPIAPTATLLSKKTPATLAPKEAL--IPPAMTVPSPKKTPAIPTPKE---- 1569
Query: 132 TAHRTPESQPVSSVAGLVSGSVAGPA--EEMLVPGS---------PEIAAPLPPSASLGP 180
A TP S+ SS + + G +E+L+P + P A PPS GP
Sbjct: 1570 -APATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGP 1628
Query: 181 SPSSPRVPGGADPIQSSAL 199
+ +P+ + P+ S+L
Sbjct: 1629 ATPAPKGTPTSPPVTPSSL 1647
Score = 39.3 bits (90), Expect = 0.012
Identities = 37/125 (29%), Positives = 45/125 (36%), Gaps = 18/125 (14%)
Query: 77 PSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPS--GTAGVPGRAPPGPAPSALAWPT-- 132
PS + +P G P A A PS G P PP P LA P+
Sbjct: 1157 PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK-GGLATPSPK 1215
Query: 133 -AHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPR---VP 188
A TP + P S GL + S G +P A PPS GP+ P+ P
Sbjct: 1216 GAPTTPAATPPSPKGGLATPSPKG---------APTTPAATPPSPKGGPATPPPKGAPTP 1266
Query: 189 GGADP 193
A P
Sbjct: 1267 PAATP 1271
Score = 39.3 bits (90), Expect = 0.012
Identities = 58/228 (25%), Positives = 88/228 (38%), Gaps = 32/228 (14%)
Query: 31 KDPGWPPSAPGTSALQGNSKKTLLSLNILPAIVD----------GVSLSAERKGEA-PST 79
K+ PP+ ++ S K LL I PA+ V+ + KG A P+
Sbjct: 1577 KEASSPPAVTPSTYKGAPSPKELL---IPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAP 1633
Query: 80 RAEALSPEV--SGDQEAPLA-LSLDSSSDQAVPSGTAGVPGRAPPGPAPSALAWPTAHRT 136
+ SP V S +++P + S+ VP + G+P + P L P
Sbjct: 1634 KGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAP----A 1689
Query: 137 PESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGADPIQS 196
PES P+ + + + GP + SP I P P + + P S P P+Q
Sbjct: 1690 PESTPI-----ITAPTRKGPQTKKSSATSPPI-CPDPSAKNGSKGPLSTVAPAPLLPVQK 1743
Query: 197 SALPYRSQTFSFQDSVSSTPGPSHMTRSVTFT-ITNEAFSAALLNPAS 243
+ S+T +D+ S GP S T +T AF L P S
Sbjct: 1744 DS----SKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPES 1787
Score = 37.7 bits (86), Expect = 0.034
Identities = 36/131 (27%), Positives = 45/131 (34%), Gaps = 16/131 (12%)
Query: 77 PSTRAEALSPEVSGDQEAPLALSLDSSSDQAVPS--GTAGVPGRAPPGPAPSALAWPT-- 132
PS + +P G P A A PS G P PP P P
Sbjct: 1203 PSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKG 1262
Query: 133 AHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPR---VPG 189
A P + P S + G +A P + G+P A PPS GP+ S P+ P
Sbjct: 1263 APTPPAATPPS-----LKGGLATPPHK----GAPNPAVVTPPSPKGGPATSPPKGAPTPP 1313
Query: 190 GADPIQSSALP 200
A P P
Sbjct: 1314 AATPPSPKGSP 1324
Score = 37.0 bits (84), Expect = 0.058
Identities = 41/151 (27%), Positives = 50/151 (33%), Gaps = 19/151 (12%)
Query: 77 PSTRAEALSPEVSGDQEAPLALSLDSSSDQAVP--SGTAGVPGRAPPGPAPSALAWPT-- 132
PS + +P G P A A P G P PP P LA P
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPK-GGLATPPPK 1169
Query: 133 -AHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLG---PSP-SSPRV 187
A TP + P S GL + S G +P A PPS G PSP +P
Sbjct: 1170 GAPTTPAATPPSPKGGLATPSPKG---------APTTPAATPPSPKGGLATPSPKGAPTT 1220
Query: 188 PGGADPIQSSALPYRSQTFSFQDSVSSTPGP 218
P P L S + ++ P P
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPAATPPSP 1251
Score = 36.2 bits (82), Expect = 0.100
Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 36/237 (15%)
Query: 8 AAGILLAALWMVSASALNLPSTHKDPGWPPSAPGTSA--------LQGN----------S 49
A +L ++L + +A L S P +A GTS L+G
Sbjct: 632 AGPLLKSSLITPTVAAFPLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVK 691
Query: 50 KKTLLSLNILPAIVDGVSLSAERKGEAPSTRAEALSPEVSGDQEAPLALSLDSSSDQAVP 109
+ TL +L ++P + ++ + L+PE+ P ++ S P
Sbjct: 692 EGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEI------PKSVPSPSLPPAGTP 745
Query: 110 SGTAGVPGRAPPGPAPSALAWPTAHRTPESQPVSSVAGLVSGS------VAGPAEEMLVP 163
GT V G + SALA P A E S A + S +A + V
Sbjct: 746 PGTKKVDGISHT----SALA-PVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVS 800
Query: 164 GSPEIAAPLPPSASLGPSPSSPRVPGGADPIQSSALPYRSQTF-SFQDSVSSTPGPS 219
SP+ P S GP + P+++S LP S +F +DS ++T P+
Sbjct: 801 VSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPT 857
Score = 36.2 bits (82), Expect = 0.100
Identities = 56/238 (23%), Positives = 82/238 (34%), Gaps = 39/238 (16%)
Query: 27 PSTHKDPGWPP--SAPGTSALQGNSKKTLLSLNIL-PAIVDGVSLSAERKGEAP------ 77
PS PG PP AP A+ S K +L P+ G + + ++G P
Sbjct: 1318 PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPS 1377
Query: 78 ----------STRAEALSPEVSGDQEAPLALSLDSSSDQAVPSGTAGVPGRAPPGPAPSA 127
S + P GD +P + L A P G + P A
Sbjct: 1378 HKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPA 1437
Query: 128 LAWPTAHRTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSP----- 182
+ TP S + G A P+ + G P + A PPS P+P
Sbjct: 1438 V-------TPVSLKKAPATSAPKGGPATPSSK----GDPTLPAVTPPSPKEPPAPKQVAT 1486
Query: 183 -SSP-RVPGGADPIQSSALPYRSQTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAAL 238
SSP + P P+ + LP + S V +TP + T T+ ++ A L
Sbjct: 1487 SSSPKKAPATPAPMGAPTLP--AVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATL 1542
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,307,492
Number of Sequences: 37866
Number of extensions: 1688203
Number of successful extensions: 12201
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 904
Number of HSP's that attempted gapping in prelim test: 9311
Number of HSP's gapped (non-prelim): 3221
length of query: 664
length of database: 18,247,518
effective HSP length: 109
effective length of query: 555
effective length of database: 14,120,124
effective search space: 7836668820
effective search space used: 7836668820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.