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Search of human proteins with 239745091
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo
sapiens]
(216 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo ... 461 e-130
gi|239750783 PREDICTED: hypothetical protein XP_002347553 [Homo ... 449 e-127
gi|239756245 PREDICTED: hypothetical protein [Homo sapiens] 446 e-126
gi|62955829 hypothetical protein LOC90871 [Homo sapiens] 191 5e-49
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 40 0.002
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 36 0.022
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] 36 0.022
gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] 36 0.022
gi|146134388 YLP motif containing 1 [Homo sapiens] 36 0.022
gi|116284392 mucin 2 precursor [Homo sapiens] 35 0.037
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 35 0.037
gi|238859557 regulatory factor X1 [Homo sapiens] 35 0.063
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 35 0.063
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 34 0.083
gi|117938759 GNAS complex locus XLas [Homo sapiens] 34 0.11
gi|83367077 mucin 16 [Homo sapiens] 33 0.14
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 33 0.14
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 33 0.14
gi|157277988 phosphodiesterase 4D isoform 1 [Homo sapiens] 33 0.18
gi|109150435 ankyrin repeat and zinc finger domain containing 1 ... 33 0.18
gi|109150425 ankyrin repeat and zinc finger domain containing 1 ... 33 0.18
gi|163965366 nascent polypeptide-associated complex alpha subuni... 33 0.18
gi|4507379 TATA box binding protein [Homo sapiens] 33 0.24
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 33 0.24
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 33 0.24
gi|21264337 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... 33 0.24
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 32 0.31
gi|14043024 BCL2-associated athanogene 3 [Homo sapiens] 32 0.31
gi|47132519 Ras association and pleckstrin homology domains 1 is... 32 0.31
gi|49472835 bridging integrator 2 [Homo sapiens] 32 0.31
>gi|239745091 PREDICTED: hypothetical protein XP_002343358 [Homo
sapiens]
Length = 216
Score = 461 bits (1185), Expect = e-130
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1 MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
Query: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVP 120
QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVP
Sbjct: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVP 120
Query: 121 PDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMGAGGYVYWVAQKPMKMG 180
PDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMGAGGYVYWVAQKPMKMG
Sbjct: 121 PDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMGAGGYVYWVAQKPMKMG 180
Query: 181 YPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 216
YPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 181 YPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 216
>gi|239750783 PREDICTED: hypothetical protein XP_002347553 [Homo
sapiens]
Length = 235
Score = 449 bits (1155), Expect = e-127
Identities = 216/235 (91%), Positives = 216/235 (91%), Gaps = 19/235 (8%)
Query: 1 MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1 MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
Query: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-------------------EAEF 101
QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ EAEF
Sbjct: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
Query: 102 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 161
QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR
Sbjct: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
Query: 162 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 216
LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
>gi|239756245 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 446 bits (1147), Expect = e-126
Identities = 215/235 (91%), Positives = 215/235 (91%), Gaps = 19/235 (8%)
Query: 1 MDPFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
MDPFAGNADPS TQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT
Sbjct: 1 MDPFAGNADPSWTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHT 60
Query: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ-------------------EAEF 101
QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQ EAEF
Sbjct: 61 QPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQSHSLPLGMVGALPGVFSKREAEF 120
Query: 102 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 161
QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR
Sbjct: 121 QNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 180
Query: 162 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 216
LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV
Sbjct: 181 LMGAGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 235
>gi|62955829 hypothetical protein LOC90871 [Homo sapiens]
Length = 112
Score = 191 bits (484), Expect = 5e-49
Identities = 89/112 (79%), Positives = 97/112 (86%), Gaps = 1/112 (0%)
Query: 105 GSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLRLMG 164
GS+LSQPFES I PP TAA PAKPA PATPG+PTSPAEH LL+TCWSC VLSGL LMG
Sbjct: 2 GSRLSQPFESY-ITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCWSCRVLSGLGLMG 60
Query: 165 AGGYVYWVAQKPMKMGYPPGPWTIMKMVMGLSIAAWGIIVMADPKRKAYHIV 216
AGGYVYWVA+KPMKMGYPP PWTI +MV+GLSIA WGI+VMADPK KAY +V
Sbjct: 61 AGGYVYWVARKPMKMGYPPSPWTITQMVIGLSIATWGIVVMADPKGKAYRVV 112
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 40.0 bits (92), Expect = 0.002
Identities = 32/105 (30%), Positives = 41/105 (39%), Gaps = 11/105 (10%)
Query: 29 DRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPR 88
D VT +T + PY P G P P++QPP R ++ T MTR P
Sbjct: 2188 DLFVTPVTNQRHSDPYAHPPGTPRPGISVPYSQPPATPRPRISEG-FTRSSMTRPVLMPN 2246
Query: 89 NHLQLQTGQEAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATP 133
LQ QN G L P + PPDT + +P P
Sbjct: 2247 QDPFLQAA-----QNRGPALPGP-----LVRPPDTCSQTPRPPGP 2281
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 36.2 bits (82), Expect = 0.022
Identities = 45/153 (29%), Positives = 59/153 (38%), Gaps = 19/153 (12%)
Query: 3 PFAGNADPSRTQGTL-GPPCHPTLEGQDRRVTGLT-QDAEAVPYCRP------QGAPPLP 54
P AG P+ GT P PTL RV G T + P RP + APP P
Sbjct: 953 PTAGKLGPTLGAGTTRSPGSPPTL-----RVHGDTGSPRKPWPERRPPRPAATRTAPPTP 1007
Query: 55 TLAPHTQP--PGP-LRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQP 111
+ P P PGP L S++ + +T + T A N L+ P
Sbjct: 1008 SPGPSASPGPPGPALTSDSSRELTPHSALTSEATSDAPDTSPPTPDPASRTNPDLILTSP 1067
Query: 112 FESLKIAVPPDTAAVPAKPATPATPGSPTSPAE 144
+L PD++ VPA P+ PT P E
Sbjct: 1068 DFALST---PDSSVVPALTPEPSPTPLPTLPKE 1097
>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
Length = 1184
Score = 36.2 bits (82), Expect = 0.022
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 28/147 (19%)
Query: 17 LGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQ-------------GAPPLPTLAPHTQPP 63
LGPP ++ + RRVT +++ E R + G LPT AP P
Sbjct: 260 LGPPA--PVQAKARRVTEDSEEEEEEEEEREEMAVTEQLAAGGHRGLDGLPTTAP-AGPS 316
Query: 64 GPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVPPDT 123
P+++ A+A A + R P +L L +A ++TG E + A
Sbjct: 317 LPIQEERAEAGARAEAGAR----PEENLILDA--QATSRSTGP------EGVTHAPSLGK 364
Query: 124 AAVPAKPATPATPGSPTSPAEHHLLET 150
AA+ A P +P P P+ H++L T
Sbjct: 365 AALVPTQAVPGSPRDPVKPSPHNILST 391
>gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]
Length = 1231
Score = 36.2 bits (82), Expect = 0.022
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 28/147 (19%)
Query: 17 LGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQ-------------GAPPLPTLAPHTQPP 63
LGPP ++ + RRVT +++ E R + G LPT AP P
Sbjct: 260 LGPPA--PVQAKARRVTEDSEEEEEEEEEREEMAVTEQLAAGGHRGLDGLPTTAP-AGPS 316
Query: 64 GPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVPPDT 123
P+++ A+A A + R P +L L +A ++TG E + A
Sbjct: 317 LPIQEERAEAGARAEAGAR----PEENLILDA--QATSRSTGP------EGVTHAPSLGK 364
Query: 124 AAVPAKPATPATPGSPTSPAEHHLLET 150
AA+ A P +P P P+ H++L T
Sbjct: 365 AALVPTQAVPGSPRDPVKPSPHNILST 391
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 36.2 bits (82), Expect = 0.022
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 51 PPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRN--HLQLQTGQEAEFQNTGSQL 108
PP P + P PPGP + Q + +Q++ QRD P ++L++ E+ GS +
Sbjct: 102 PPPPPMPP---PPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYM 158
Query: 109 SQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAE 144
P +S P + P + P P + SP++
Sbjct: 159 -PPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQ 193
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 35.4 bits (80), Expect = 0.037
Identities = 28/132 (21%), Positives = 37/132 (28%)
Query: 10 PSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDH 69
P T T PP +T T P P P T P T P P
Sbjct: 1604 PPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTT 1663
Query: 70 SAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVPPDTAAVPAK 129
+ T P + + T S + P + P + P+
Sbjct: 1664 TPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSP 1723
Query: 130 PATPATPGSPTS 141
P T T SPT+
Sbjct: 1724 PPTTMTTPSPTT 1735
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 35.4 bits (80), Expect = 0.037
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 70 SAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNT----GSQLSQPFESLKIAVPPDTAA 125
S + R +++ R++ R+ L+ A++ N+ GS S P S PP T+
Sbjct: 452 SEEERKKRKILARKKS-KRSALENSEEHSAKYSNSNNSAGSGASSPLTSPSSPTPPSTSG 510
Query: 126 VPAKPATPATPGSPTSP 142
+ A P P P P +P
Sbjct: 511 ISALPPPPPPPPPPAAP 527
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 34.7 bits (78), Expect = 0.063
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 36 TQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQT 95
+Q +A P +PQ PP P AP QPP P +A A Q +T + P+ Q
Sbjct: 16 SQPPQAPPQAQPQPPPPPPPAAP--QPPQP---PTAAATPQPQYVTELQS-PQPQAQPPG 69
Query: 96 GQE----------AEFQNTGSQLSQPFESLKIAVPPDTAAVPA-KPATPATPGSPTS 141
GQ+ A Q TG+ P I V A+ A + + A+PGS S
Sbjct: 70 GQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTVSEGAMRASETVSEASPGSTAS 126
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 34.7 bits (78), Expect = 0.063
Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 20/110 (18%)
Query: 39 AEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQE 98
A A+ G PP P L + P GP + Q + RQ+ P H+ E
Sbjct: 107 ASALEALEGGGPPPPPALPTWSVPNGPSPEEVEQQK-------RQQPGPSEHI------E 153
Query: 99 AEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTS--PAEHH 146
N G + P PP P P P PG P S PA H
Sbjct: 154 RRVSNAGGPPAPPAGG-----PPPPPGPPPPPGPPPPPGLPPSGVPAAAH 198
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 34.3 bits (77), Expect = 0.083
Identities = 25/101 (24%), Positives = 34/101 (33%)
Query: 39 AEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQE 98
AEA P PP P PP P SA+A + +R+ R +
Sbjct: 168 AEAHPVMALPAPPPSPAARQPEPPPMPRAARSARAATAARAAAAEREEAREERARGCSEA 227
Query: 99 AEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSP 139
+ + P + TAA A+P P GSP
Sbjct: 228 SRTSSDSGPSRAPAARVVGGEAAATAAARARPRAPLAAGSP 268
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 33.9 bits (76), Expect = 0.11
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 65 PLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVPPDTA 124
P + + A T R P +G E ++G+ + P +S A PD+
Sbjct: 374 PSPGYGSPAAGAASADTAARAAPAAPADPDSGATPEDPDSGTAPADP-DSGAFAADPDSG 432
Query: 125 AVPAKPATPATPGSPTSPAE 144
A PA PA P + +P +PA+
Sbjct: 433 AAPAAPADPDSGAAPDAPAD 452
Score = 27.7 bits (60), Expect = 7.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 103 NTGSQLSQPFESLKIAVP--PDTAAVPAKPATPATPGSPTSPAE 144
++G+ + P A P PD+ A P PA P + +P +PA+
Sbjct: 421 DSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPDAPAD 464
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.5 bits (75), Expect = 0.14
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 28/160 (17%)
Query: 10 PSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDH 69
P R + P HP+ G++ + LT A T +P+ P G L
Sbjct: 782 PERVRNATSPLTHPSPSGEETAGSVLTLSTSAE-----------TTDSPNIHPTGTLTSE 830
Query: 70 SAQARATNQV-------MTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESL-KIAVPP 121
S+++ +T + T P HL +G+E E + + +SQP S+ ++
Sbjct: 831 SSESPSTLSLPSVSGVKTTFSSSTPSTHL-FTSGEETE-ETSNPSVSQPETSVSRVRTTL 888
Query: 122 DTAAVPAKPATPATPGSPTSPAEHHLLETCWSCHVLSGLR 161
+ +VP P P PT A+ S H++S LR
Sbjct: 889 ASTSVPT-PVFPTMDTWPTRSAQFS------SSHLVSELR 921
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 33.5 bits (75), Expect = 0.14
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 12/102 (11%)
Query: 54 PTLAPHTQPPGPLRDHSAQ--ARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQP 111
P+L+P PP PL + A ++ P L+ G + + + S L+ P
Sbjct: 923 PSLSPQLMPPDPLPPPLSPIITAAAPPALS-----PLGELEYPFGAKGD-SDPESPLAAP 976
Query: 112 FESLKIAVPPDTAAVPAKPATPA----TPGSPTSPAEHHLLE 149
I+ PP+ +P P +PGSP PA L+E
Sbjct: 977 ILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILME 1018
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 33.5 bits (75), Expect = 0.14
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 90 HLQLQTGQEAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPA 143
HL ++T Q+A+ + S P + P T A PA PA P+T GS +S A
Sbjct: 79 HLVIKTPQKAQ-DPAAATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDA 131
>gi|157277988 phosphodiesterase 4D isoform 1 [Homo sapiens]
Length = 809
Score = 33.1 bits (74), Expect = 0.18
Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 12/107 (11%)
Query: 43 PYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQ----------RDWPRNHLQ 92
P C P PP P L P PPG R A + AT +V R R R
Sbjct: 69 PQC-PLQPPPPPPLPPPPPPPGAARGRYASSGATGRVRHRGYSDTERYLYCRAMDRTSYA 127
Query: 93 LQTGQEAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPAT-PGS 138
++TG + + F+ L+ + + P P T PGS
Sbjct: 128 VETGHRPGLKKSRMSWPSSFQGLRRFDVDNGTSAGRSPLDPMTSPGS 174
>gi|109150435 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 33.1 bits (74), Expect = 0.18
Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 61 QPPGPLRDHSAQARATNQ----VMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLK 116
Q PGPL +AT + RQR+ + Q Q +E E Q + LS
Sbjct: 601 QVPGPLTPEMEARQATRKREQKAARRQREEQQQRQQEQEEREREEQRRFAALSDR----- 655
Query: 117 IAVPPDTAAVPAKPATPATPGSPTSPAEHHLL---ETCWSCHVLSGLRLMGAGGYVY 170
+ A+ A+ A G+PTSP + CWSC G L G + Y
Sbjct: 656 -----EKRALAAERRLAAQLGAPTSPIPDSAIVNTRRCWSC----GASLQGLTPFHY 703
>gi|109150425 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 33.1 bits (74), Expect = 0.18
Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 61 QPPGPLRDHSAQARATNQ----VMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLK 116
Q PGPL +AT + RQR+ + Q Q +E E Q + LS
Sbjct: 601 QVPGPLTPEMEARQATRKREQKAARRQREEQQQRQQEQEEREREEQRRFAALSDR----- 655
Query: 117 IAVPPDTAAVPAKPATPATPGSPTSPAEHHLL---ETCWSCHVLSGLRLMGAGGYVY 170
+ A+ A+ A G+PTSP + CWSC G L G + Y
Sbjct: 656 -----EKRALAAERRLAAQLGAPTSPIPDSAIVNTRRCWSC----GASLQGLTPFHY 703
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 33.1 bits (74), Expect = 0.18
Identities = 37/152 (24%), Positives = 54/152 (35%), Gaps = 17/152 (11%)
Query: 6 GNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGP 65
G PS +G P P+ +G + A+P P+G P P + P + P
Sbjct: 1359 GPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP--SPKGDPTSPAVIPLSPKKAP 1416
Query: 66 LRDHSAQARATNQV--MTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVPPDT 123
+ + AT +T P + L+ A + S+ +L PP
Sbjct: 1417 ATPVTREGAATPSKGDLTPPAVTPVS-LKKAPATSAPKGGPATPSSKGDPTLPAVTPPSP 1475
Query: 124 AAVPAK------------PATPATPGSPTSPA 143
PA PATPA G+PT PA
Sbjct: 1476 KEPPAPKQVATSSSPKKAPATPAPMGAPTLPA 1507
Score = 29.3 bits (64), Expect = 2.7
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 12/105 (11%)
Query: 47 PQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGS 106
P+GAP P P + P G L S + T T P+ L + + A +
Sbjct: 1168 PKGAPTTPAATPPS-PKGGLATPSPKGAPTTPAATPPS--PKGGLATPSPKGAPTTPAAT 1224
Query: 107 QLSQPFESLKIAVPPDTAAVPAK--------PATPATPGSPTSPA 143
S P L P PA PATP G+PT PA
Sbjct: 1225 PPS-PKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPA 1268
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 32.7 bits (73), Expect = 0.24
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 72 QARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFES--LKIAVPPDTAAVPAK 129
Q + Q +Q+ +Q T Q+A Q T Q Q F S L A P T +
Sbjct: 83 QQQQQQQQQQQQQAVAAAAVQQSTSQQAT-QGTSGQAPQLFHSQTLTTAPLPGTTPLYPS 141
Query: 130 PATPATPGSPTSPA 143
P TP TP +P +PA
Sbjct: 142 PMTPMTPITPATPA 155
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 32.7 bits (73), Expect = 0.24
Identities = 36/150 (24%), Positives = 50/150 (33%), Gaps = 19/150 (12%)
Query: 2 DPFAGNADPSRTQG---TLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAP 58
+PFA P T T P T T TQ+ E P PPL P
Sbjct: 727 EPFASLQSPFPTDTAPTTTAPAVAVTTTTTTTTTTTATQEEEKKPPPALPPPPPLAKFPP 786
Query: 59 HTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQ-----PFE 113
+QP P + A + + + GQ+ ++ TG+ +S P
Sbjct: 787 PSQPQPPPPPPPSPASLLKSLAS-----------VLEGQKYCYRGTGAAVSTRPGPLPTT 835
Query: 114 SLKIAVPPDTAAVPAKPATPATPGSPTSPA 143
P A+P A P+ GSP A
Sbjct: 836 QYSPGPPSGATALPPTSAAPSAQGSPQPSA 865
Score = 28.9 bits (63), Expect = 3.5
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 47 PQGAPPLPTLAPHTQ--PPGPLRDH---SAQARATNQVMTRQRDWPRNHLQLQTGQEAEF 101
P G LP P PP PL D A+ + + ++ + Q+
Sbjct: 657 PPGVGELPARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMKMLDESIRKEEEQQQHE 716
Query: 102 QNTGSQ--LSQPFESLKIAVPPDTAAVPAKPATPATPGSPTS 141
Q L +PF SL+ P DTA PA T + T+
Sbjct: 717 AGVAPQPPLKEPFASLQSPFPTDTAPTTTAPAVAVTTTTTTT 758
Score = 28.5 bits (62), Expect = 4.5
Identities = 35/137 (25%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 18 GPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATN 77
GP L +R G + +P P PPLP P PP P A +
Sbjct: 216 GPSGEEGLSPGGKRRRGCNSEQTGLPPGLPLPPPPLPPPPPPPPPPPP--PLPGLATSPP 273
Query: 78 QVMTRQRDWPRNH-----LQLQTGQEAEFQNTGSQLSQPFESLKIAVPPDTAAVPAK--- 129
+T+ W H + + E Q L P+ P TA P
Sbjct: 274 FQLTKPGLWSTLHGDAWGPERKGSAPPERQEQRHSLPHPY---PYPAPAYTAHPPGHRLV 330
Query: 130 PATPATPGSPTSPAEHH 146
PA P PG AE H
Sbjct: 331 PAAPPGPGPRPPGAESH 347
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 32.7 bits (73), Expect = 0.24
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 37 QDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQRDWPR--NHLQLQ 94
+D E + GA PL +P QPPGP + + V T PR +L
Sbjct: 682 EDEEGIGCAARGGATPLSYPSPGPQPPGP-----SWTATFDPVPTDAPTSPRVSGEEELH 736
Query: 95 TGQEAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSPAE 144
TG A P +SL A PP A+ + P P +P E
Sbjct: 737 TGPPAPQGPLSVPQGLPTQSL--ASPPARDALQLRSQDPTPPSAPQEATE 784
>gi|21264337 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
[Homo sapiens]
Length = 1544
Score = 32.7 bits (73), Expect = 0.24
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 58 PHTQPPGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKI 117
P PPGP S QAR + + Q + L L+ G+ + SQ S P
Sbjct: 1462 PPEPPPGPPSKSSPQARGSLEEQLLQE---LSSLILRKGETTAGLGSPSQPSSPQSPSPT 1518
Query: 118 AVPPDTAAVPAKPATPATPGSPTS 141
+P T P +P P T P+S
Sbjct: 1519 GLPTQTPGFPTQP--PCTSSPPSS 1540
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 32.3 bits (72), Expect = 0.31
Identities = 36/143 (25%), Positives = 52/143 (36%), Gaps = 12/143 (8%)
Query: 3 PFAGNADPSRTQGTLGPPCHPTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQP 62
P + PSRT G PP + + T L Q A P P+ PP +AP T+P
Sbjct: 1065 PIRPSRAPSRTPG---PPSAQSSPIDAQPATPLPQKDPAQPL-EPKRPPPPRPVAPPTRP 1120
Query: 63 PGPLRDHSAQARATNQVMTRQRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVPPD 122
P R + ++ P++ + N G SQP +A P
Sbjct: 1121 APPQRPPPPSGARSPAPTRKEFGAPKSPGTTRK------DNIGR--SQPSPQAGLAGPGP 1172
Query: 123 TAAVPAKPATPATPGSPTSPAEH 145
A+P P G ++P H
Sbjct: 1173 AGYSTARPTIPPRAGVISAPQSH 1195
>gi|14043024 BCL2-associated athanogene 3 [Homo sapiens]
Length = 575
Score = 32.3 bits (72), Expect = 0.31
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 24/115 (20%)
Query: 48 QGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTRQR-------------------DWPR 88
+G+P + H+ P P+R H+ R + R+ + P
Sbjct: 277 EGSPARSSTPLHS--PSPIRVHTVVDRPQQPMTHRETAPVSQPENKPESKPGPVGPELPP 334
Query: 89 NHLQLQT-GQEAEFQNTGSQLSQPFESLKIAVPPDTAAVPAKPATPATPGSPTSP 142
H+ +Q +E + + + P E +++ VPP A VP P +P P+SP
Sbjct: 335 GHIPIQVIRKEVDSKPVSQKPPPPSEKVEVKVPP--APVPCPPPSPGPSAVPSSP 387
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 32.3 bits (72), Expect = 0.31
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 17/125 (13%)
Query: 23 PTLEGQDRRVTGLTQDAEAVPYCRPQGAPPLPTLAPHTQPPGPLRDHSAQARATNQVMTR 82
P L Q + VT T ++ P P PP P P PP PL SA + + M
Sbjct: 607 PPLSPQPKIVTPYTA-SQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFV 665
Query: 83 QRDWPRNHLQLQTGQEAEFQNTGSQLSQP------FESLK--IAVPPD-TAAVPAKPATP 133
+ T + Q++G+ P +S+K I VPP+ P P P
Sbjct: 666 K-------YSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPP 718
Query: 134 ATPGS 138
TPGS
Sbjct: 719 PTPGS 723
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 32.3 bits (72), Expect = 0.31
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 17/121 (14%)
Query: 36 TQDAEAVPYCR-PQGAPPLPT---------LAPHTQPPGP---LRDHSAQARATNQVMTR 82
+++ E +P C P A P PT + P + P P L + + +V+ R
Sbjct: 331 SEEDEPLPACNGPAQAQPSPTTERAKSQEEVLPSSTTPSPGGALSPSGQPSSSATEVVLR 390
Query: 83 QRDWPRNHLQLQTGQEAEFQNTGSQLSQPFESLKIAVP-PDTAAVPAKPATPATPGSPTS 141
R Q + + A Q T + S+P A P P + +P+ P T + GSPTS
Sbjct: 391 TRTASEGSEQPK--KRASIQRTSAPPSRPPPPRATASPRPSSGNIPSSP-TASGGGSPTS 447
Query: 142 P 142
P
Sbjct: 448 P 448
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,327,533
Number of Sequences: 37866
Number of extensions: 617269
Number of successful extensions: 5557
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 4963
Number of HSP's gapped (non-prelim): 779
length of query: 216
length of database: 18,247,518
effective HSP length: 98
effective length of query: 118
effective length of database: 14,536,650
effective search space: 1715324700
effective search space used: 1715324700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.