Search of human proteins with 239745001

Search of human proteins with 239745001

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745001 PREDICTED: hypothetical protein XP_002343291 [Homo
sapiens]
         (150 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756153 PREDICTED: hypothetical protein [Homo sapiens]           329   5e-91
gi|239750693 PREDICTED: hypothetical protein [Homo sapiens]           329   5e-91
gi|239745001 PREDICTED: hypothetical protein XP_002343291 [Homo ...   329   5e-91
gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo sa...    33   0.12 
gi|27734799 REST corepressor 2 [Homo sapiens]                          32   0.15 
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         32   0.20 
gi|39652628 oxidative stress-associated Src activator [Homo sapi...    32   0.26 
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]     31   0.34 
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    31   0.34 
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             31   0.34 
gi|21322252 androgen receptor isoform 1 [Homo sapiens]                 31   0.45 
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]               31   0.45 
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]               31   0.45 
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]               31   0.45 
gi|157388908 hypothetical protein LOC54954 [Homo sapiens]              31   0.45 
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ...    30   0.59 
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ...    30   0.59 
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ...    30   0.59 
gi|32307177 forkhead box G1 [Homo sapiens]                             30   0.59 
gi|50233787 nuclear protein in testis [Homo sapiens]                   30   0.59 
gi|145976942 transcription factor NF-E4 [Homo sapiens]                 30   0.59 
gi|122937424 one cut homeobox 3 [Homo sapiens]                         30   0.59 
gi|4757838 BCL2-associated X protein isoform beta [Homo sapiens]       30   0.76 
gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ...    30   0.76 
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]        30   0.76 
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]         30   0.76 
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]           30   1.00 
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]          30   1.00 
gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo ...    30   1.00 
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ...    30   1.00 

>gi|239756153 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 150

 Score =  329 bits (844), Expect = 5e-91
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA 60
           MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA
Sbjct: 1   MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA 60

Query: 61  LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120
           LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG
Sbjct: 61  LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120

Query: 121 NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG 150
           NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG
Sbjct: 121 NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG 150


>gi|239750693 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 150

 Score =  329 bits (844), Expect = 5e-91
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA 60
           MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA
Sbjct: 1   MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA 60

Query: 61  LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120
           LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG
Sbjct: 61  LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120

Query: 121 NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG 150
           NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG
Sbjct: 121 NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG 150


>gi|239745001 PREDICTED: hypothetical protein XP_002343291 [Homo
           sapiens]
          Length = 150

 Score =  329 bits (844), Expect = 5e-91
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA 60
           MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA
Sbjct: 1   MEWAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANA 60

Query: 61  LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120
           LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG
Sbjct: 61  LRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120

Query: 121 NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG 150
           NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG
Sbjct: 121 NEVGTGDGQVRAEPYLRVDRRAHAGEGVCG 150


>gi|223890219 RNA binding motif protein, X-linked-like 3 [Homo
           sapiens]
          Length = 1067

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 9/63 (14%)

Query: 68  GLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGS----DRGNEV 123
           G HN+S    P  GGG  E  RG  L    GG     H P     GRD S    DR +  
Sbjct: 801 GGHNSSSRNDPCRGGGRYEENRGHSLDANSGG-----HSPNAYSGGRDSSSNSYDRSHRY 855

Query: 124 GTG 126
           G G
Sbjct: 856 GGG 858



 Score = 28.5 bits (62), Expect = 2.2
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 68  GLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTG 126
           G H++S   +  GGGG  E  RG  L    GG       P     G D S + +  G G
Sbjct: 691 GGHDSSSQSNRYGGGGRYEEYRGHSLDANSGG-----RSPDTYSRGHDSSSQSDHYGGG 744



 Score = 27.7 bits (60), Expect = 3.8
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 68  GLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTG 126
           G H++S   +  GGGG  E  RG  L    GG       P     G D S + N  G G
Sbjct: 652 GGHDSSGQSNCYGGGGRYEEYRGRLLDANSGG-----RSPDAYSGGHDSSSQSNRYGGG 705



 Score = 27.3 bits (59), Expect = 5.0
 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 68  GLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTG 126
           G H++S      GGGG  E  RG  L    GG       P     G D S + N  G G
Sbjct: 613 GGHDSSSWSHRYGGGGRYEEYRGRSLDANSGG-----RSPDAYSGGHDSSGQSNCYGGG 666



 Score = 26.6 bits (57), Expect = 8.5
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 68  GLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTG 126
           G H++S   +  GGGG  E  RG  L    GG       P     G D S   +  G G
Sbjct: 574 GGHDSSSQSNRYGGGGCYEEYRGRSLDANSGG-----RSPNAYSGGHDSSSWSHRYGGG 627


>gi|27734799 REST corepressor 2 [Homo sapiens]
          Length = 523

 Score = 32.3 bits (72), Expect = 0.15
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 15  SQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASP 74
           SQP   L P    P +P LL   PP  Q  + + P L    PP   +R A     H+A P
Sbjct: 447 SQPPPLLRPPL--PTAPTLLRQPPPLQQGRFLQ-PRLAPNQPPPPLIRPALAAPRHSARP 503

Query: 75  GVSP 78
           G  P
Sbjct: 504 GPQP 507


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 32.0 bits (71), Expect = 0.20
 Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 11/88 (12%)

Query: 15  SQPHQW--LHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNA 72
           ++P  W  LH   W P   G   + PP  QE+   +PH +    PA          +  A
Sbjct: 277 TKPGLWSTLHGDAWGPERKG---SAPPERQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAA 333

Query: 73  SPGVSPSGGGGDSE------RVRGSGLR 94
            PG  P   G +S       R  GS LR
Sbjct: 334 PPGPGPRPPGAESHGCLPATRPPGSDLR 361


>gi|39652628 oxidative stress-associated Src activator [Homo
           sapiens]
          Length = 1118

 Score = 31.6 bits (70), Expect = 0.26
 Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 29/137 (21%)

Query: 17  PHQWLHPLYWAPASPGLLPTQPPH--SQEEYARVPH------LFHLAPPANALRSASCHG 68
           P Q  +P   +  +P  L T   +   Q  Y+ +PH      L+  + P N  +S S + 
Sbjct: 388 PGQGPYPYSLSEPAPLTLDTSGKNLTEQNSYSNIPHEGKHTPLYERSSPINPAQSGSPNH 447

Query: 69  LHNAS-PGVSPS-------GGGGDSERVRGSGLRWGHGGDEGGLHQPLQVR--------- 111
           + +A  PG S S       G GG +  + G+ + W    ++ G H   Q R         
Sbjct: 448 VDSAYFPGSSTSSSSDNDEGSGGATNHISGNKIGW----EKTGSHSEPQARGDPGDQTKA 503

Query: 112 TGRDGSDRGNEVGTGDG 128
            G   +  G+++  G G
Sbjct: 504 EGSSTASSGSQLAEGKG 520


>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
          Length = 532

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 2/81 (2%)

Query: 25  YWAPASPGLL-PTQPPHSQEEYARVPHLFHLAPPANALRSASCH-GLHNASPGVSPSGGG 82
           Y +   PGL+ P+  P S    +        A  A A   ++ H G  + S G     GG
Sbjct: 432 YESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGG 491

Query: 83  GDSERVRGSGLRWGHGGDEGG 103
           G      G G   G GG  GG
Sbjct: 492 GSGSGGGGGGAGGGGGGSSGG 512


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
            sapiens]
          Length = 1636

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 16   QPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPP 57
            QP    HP  + P +PGLLP Q P+    YA  P +    PP
Sbjct: 974  QPLPLQHPHLFPPQAPGLLPPQSPY---PYAPQPGVLGQPPP 1012



 Score = 28.5 bits (62), Expect = 2.2
 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 30   SPGLLPTQPPHSQEEYARVPHLFHLAPPANAL--RSASCHGLHNASPGVSPS 79
            SPG  P QPPH    Y   P    + P A  L  R  S  G    SP + PS
Sbjct: 1038 SPG--PPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPS 1087


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 73  SPGVSPSGGGGDSERVRGSGLRWG-HGGDEGGLHQP 107
           SP  S   G G  +R  GSG R G HGG  G  H P
Sbjct: 299 SPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSP 334


>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
          Length = 920

 Score = 30.8 bits (68), Expect = 0.45
 Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 10/87 (11%)

Query: 59  NALRSASCHGLHNASPG--VSPSGGGGDSERVRGSGLRWGHGGDEG--------GLHQPL 108
           +A  S+S H L  A  G    P GGGG      G G   G GG  G        G  +P 
Sbjct: 428 SAAASSSWHTLFTAEEGQLYGPCGGGGGGGGGGGGGGGGGGGGGGGEAGAVAPYGYTRPP 487

Query: 109 QVRTGRDGSDRGNEVGTGDGQVRAEPY 135
           Q   G++      +V    G V   PY
Sbjct: 488 QGLAGQESDFTAPDVWYPGGMVSRVPY 514


>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
          Length = 558

 Score = 30.8 bits (68), Expect = 0.45
 Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 49  PHLFHLAPPANALRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPL 108
           P LF   P A+A  +A+         G   SGGGG S     SG   G GG  GG +   
Sbjct: 52  PTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGS-----SGNGGGGGGGGGGSNCNP 106

Query: 109 QVRTGRDGS-DRGNEVGTGDGQVRAEP 134
            +    +GS   G  +  G G   + P
Sbjct: 107 NLAAASNGSGGGGGGISAGGGVASSTP 133


>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
          Length = 706

 Score = 30.8 bits (68), Expect = 0.45
 Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 49  PHLFHLAPPANALRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPL 108
           P LF   P A+A  +A+         G   SGGGG S     SG   G GG  GG +   
Sbjct: 52  PTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGS-----SGNGGGGGGGGGGSNCNP 106

Query: 109 QVRTGRDGS-DRGNEVGTGDGQVRAEP 134
            +    +GS   G  +  G G   + P
Sbjct: 107 NLAAASNGSGGGGGGISAGGGVASSTP 133


>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
          Length = 504

 Score = 30.8 bits (68), Expect = 0.45
 Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 49  PHLFHLAPPANALRSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPL 108
           P LF   P A+A  +A+         G   SGGGG S     SG   G GG  GG +   
Sbjct: 52  PTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGS-----SGNGGGGGGGGGGSNCNP 106

Query: 109 QVRTGRDGS-DRGNEVGTGDGQVRAEP 134
            +    +GS   G  +  G G   + P
Sbjct: 107 NLAAASNGSGGGGGGISAGGGVASSTP 133


>gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
          Length = 1096

 Score = 30.8 bits (68), Expect = 0.45
 Identities = 35/120 (29%), Positives = 43/120 (35%), Gaps = 27/120 (22%)

Query: 23   PLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASPGVSPSGG- 81
            P +  P  P L P         Y+R      L P     RS    GLH     + P GG 
Sbjct: 911  PTFVPPMVPSLYPVSL------YSRAMGSMPLPPQG---RSRGFAGLHP----IPPQGGK 957

Query: 82   ------------GGDSERVRGS-GLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTGDG 128
                        G  S R RGS G++    G  G  H   Q   G  G  +GN+ G+ DG
Sbjct: 958  LEIAGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQTGRGSKGHKKGNKQGSSDG 1017


>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
           sapiens]
          Length = 355

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 28/115 (24%), Positives = 37/115 (32%), Gaps = 9/115 (7%)

Query: 15  SQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASP 74
           S  H W  P    P  PG  P   P         P  +  AP  +     +  G   A  
Sbjct: 76  SPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGG 135

Query: 75  GVSPSGGGGDSERV---------RGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120
           G++       S RV         RG+    G G +     Q L  R+ R  + RG
Sbjct: 136 GLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRG 190


>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
           sapiens]
          Length = 355

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 28/115 (24%), Positives = 37/115 (32%), Gaps = 9/115 (7%)

Query: 15  SQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASP 74
           S  H W  P    P  PG  P   P         P  +  AP  +     +  G   A  
Sbjct: 76  SPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGG 135

Query: 75  GVSPSGGGGDSERV---------RGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120
           G++       S RV         RG+    G G +     Q L  R+ R  + RG
Sbjct: 136 GLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRG 190


>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
           sapiens]
          Length = 355

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 28/115 (24%), Positives = 37/115 (32%), Gaps = 9/115 (7%)

Query: 15  SQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASP 74
           S  H W  P    P  PG  P   P         P  +  AP  +     +  G   A  
Sbjct: 76  SPAHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGG 135

Query: 75  GVSPSGGGGDSERV---------RGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120
           G++       S RV         RG+    G G +     Q L  R+ R  + RG
Sbjct: 136 GLTKYNSAHSSSRVPRPRLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRG 190


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 15/62 (24%)

Query: 56  PPANALRSASCHGLHN-ASPGVSP--------------SGGGGDSERVRGSGLRWGHGGD 100
           PPA AL  A   GL     PG  P              +G GG+ ++  G G + G GG 
Sbjct: 111 PPAAALDGAKADGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEGGK 170

Query: 101 EG 102
           EG
Sbjct: 171 EG 172


>gi|50233787 nuclear protein in testis [Homo sapiens]
          Length = 1132

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 42  QEEYARVPHLFHLAP----PANALRSASCHGLHNASPGVSPSGGGGDSERVRGSG--LRW 95
           +EE A  P  F  A     P+ ++      G    SPG+  +GG     +V  SG   R 
Sbjct: 476 EEEDAEAPPSFSGAQLDSSPSGSVEDEDGDGRLRPSPGLQGAGGAACLGKVSSSGKRARE 535

Query: 96  GHGGDEGGLHQPLQVRTGRDGS 117
            HGG E  L  P  +   RDG+
Sbjct: 536 VHGGQEQALDSPRGMH--RDGN 555


>gi|145976942 transcription factor NF-E4 [Homo sapiens]
          Length = 179

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 9/67 (13%)

Query: 25  YWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANALRSASCHGLHNASPGVSPSGGGGD 84
           YW PA  G   T P  S        HL HL P ++A   A+  G HNA   V+P G    
Sbjct: 71  YWGPAGHGA--TAPHRS----LLAIHL-HLVPASSAAMKAT--GPHNAQTQVNPRGHAPS 121

Query: 85  SERVRGS 91
           +E   GS
Sbjct: 122 AEDPTGS 128


>gi|122937424 one cut homeobox 3 [Homo sapiens]
          Length = 494

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 36/118 (30%), Positives = 42/118 (35%), Gaps = 11/118 (9%)

Query: 24  LYWAPASPGLLPTQPPHSQEEYARVPHLF--HLAPPANALRSASCHG-LHNASPGVSPSG 80
           L+ AP  P   P  PP     Y    HL    L PPA     A+  G   +A     P G
Sbjct: 210 LHGAPQPP---PPPPPPPLAAYGPPGHLAGDKLLPPAAFEPHAALLGRAEDALARGLPGG 266

Query: 81  GGGDSERVRGSGLRWGHGGDEGGL-----HQPLQVRTGRDGSDRGNEVGTGDGQVRAE 133
           GGG      GSG   G     GGL     H P     G  GS  G   G    ++  +
Sbjct: 267 GGGTGSGGAGSGSAAGLLAPLGGLAAAGAHGPHGGGGGPGGSGGGPSAGAAAEEINTK 324


>gi|4757838 BCL2-associated X protein isoform beta [Homo sapiens]
          Length = 218

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 3   WAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQP 38
           W   QG  +R+   PH     L  APA P L P  P
Sbjct: 151 WIQDQGGWVRLLKPPHPHHRALTTAPAPPSLPPATP 186


>gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo
           sapiens]
          Length = 609

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 40/147 (27%), Positives = 52/147 (35%), Gaps = 18/147 (12%)

Query: 17  PHQWLHPLYWAPAS-PGLLPTQPPHS-QEEYARVPHLFHLAPPANALRSASCHGLHNASP 74
           P     PL   P   PGL   +PP   + E+   PH    AP  +        G+ +   
Sbjct: 416 PETPARPLALGPLPRPGLRSARPPRQCRGEHRLGPH----APMPSPRCPGEAQGVTDGRR 471

Query: 75  GVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQ--PLQVRTGR-----DGSDRGNEVGTGD 127
             SPS  GGD +RV  +       G   G  +  P Q R GR     +GS          
Sbjct: 472 A-SPSAPGGDQDRVSTTPQPTAQPGSGAGPQRPGPTQKRGGRGVRVPEGSPARIAFSGRR 530

Query: 128 GQVRAEPYLRV----DRRAHAGEGVCG 150
           G  +A+P        DR    G G  G
Sbjct: 531 GGAKAQPMAEAESLGDRERRDGGGAAG 557


>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
          Length = 217

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 6/40 (15%)

Query: 81  GGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120
           GGG     RG G R G GG  GG       R GR G  RG
Sbjct: 181 GGGGRGGGRGGGFRGGRGGGGGGF------RGGRGGGFRG 214


>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
          Length = 217

 Score = 30.0 bits (66), Expect = 0.76
 Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 6/40 (15%)

Query: 81  GGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRG 120
           GGG     RG G R G GG  GG       R GR G  RG
Sbjct: 181 GGGGRGGGRGGGFRGGRGGGGGGF------RGGRGGGFRG 214


>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
          Length = 589

 Score = 29.6 bits (65), Expect = 1.00
 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 75  GVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTGDGQVRAEP 134
           G    G GGD     G   R G+GGD GG       R+G  G DR    G G G  R   
Sbjct: 506 GGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRS---GGGYGGDRGGG 562

Query: 135 YLRVDRRAHAGE 146
           Y   DR  + G+
Sbjct: 563 Y-GGDRGGYGGK 573



 Score = 27.7 bits (60), Expect = 3.8
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 75  GVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTGDGQVRAEP 134
           G     GG   +R    G R G+GGD GG         G  G DRG   G+G G  R+  
Sbjct: 490 GYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRS--RGGYGGDRGG--GSGYGGDRSGG 545

Query: 135 Y 135
           Y
Sbjct: 546 Y 546



 Score = 27.3 bits (59), Expect = 5.0
 Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 80  GGGGDSERVRG-SGLRWGHGGDEGGLHQPLQVRTGRD----GSDRGNEVGT--GDGQVRA 132
           GGG   +R  G  G R G+GGD GG +   +   G D    G DRG   G   G G  R+
Sbjct: 465 GGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRS 524

Query: 133 EPYLRVDRRAHAGEG 147
                 DR   +G G
Sbjct: 525 RGGYGGDRGGGSGYG 539



 Score = 26.9 bits (58), Expect = 6.5
 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 80  GGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTGDG 128
           G GGD     G     G+GGD GG       R G  G DRG   G   G
Sbjct: 459 GYGGDRGGGYGGDRGGGYGGDRGGYGGD---RGGGYGGDRGGYGGDRGG 504



 Score = 26.6 bits (57), Expect = 8.5
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 18/78 (23%)

Query: 59  NALRSASCHGLHNASPGVS-PSGG-------GGDSERVRGSGLRWGHGGDEGGLHQPLQV 110
           N  R  SC+  +   P  S PSGG       GG+    RG   R G GGD GG       
Sbjct: 366 NFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGE----RGYRGRGGRGGDRGG------Y 415

Query: 111 RTGRDGSDRGNEVGTGDG 128
              R G   G +  +G G
Sbjct: 416 GGDRSGGGYGGDRSSGGG 433


>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
          Length = 592

 Score = 29.6 bits (65), Expect = 1.00
 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 75  GVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTGDGQVRAEP 134
           G    G GGD     G   R G+GGD GG       R+G  G DR    G G G  R   
Sbjct: 509 GGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRS---GGGYGGDRGGG 565

Query: 135 YLRVDRRAHAGE 146
           Y   DR  + G+
Sbjct: 566 Y-GGDRGGYGGK 576



 Score = 27.7 bits (60), Expect = 3.8
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 75  GVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTGDGQVRAEP 134
           G     GG   +R    G R G+GGD GG         G  G DRG   G+G G  R+  
Sbjct: 493 GYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRS--RGGYGGDRGG--GSGYGGDRSGG 548

Query: 135 Y 135
           Y
Sbjct: 549 Y 549



 Score = 27.3 bits (59), Expect = 5.0
 Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 80  GGGGDSERVRG-SGLRWGHGGDEGGLHQPLQVRTGRD----GSDRGNEVGT--GDGQVRA 132
           GGG   +R  G  G R G+GGD GG +   +   G D    G DRG   G   G G  R+
Sbjct: 468 GGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRS 527

Query: 133 EPYLRVDRRAHAGEG 147
                 DR   +G G
Sbjct: 528 RGGYGGDRGGGSGYG 542



 Score = 26.9 bits (58), Expect = 6.5
 Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 80  GGGGDSERVRGSGLRWGHGGDEGGLHQPLQVRTGRDGSDRGNEVGTGDG 128
           G GGD     G     G+GGD GG       R G  G DRG   G   G
Sbjct: 462 GYGGDRGGGYGGDRGGGYGGDRGGYGGD---RGGGYGGDRGGYGGDRGG 507



 Score = 26.6 bits (57), Expect = 8.5
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 18/78 (23%)

Query: 59  NALRSASCHGLHNASPGVS-PSGG-------GGDSERVRGSGLRWGHGGDEGGLHQPLQV 110
           N  R  SC+  +   P  S PSGG       GG+    RG   R G GGD GG       
Sbjct: 369 NFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGE----RGYRGRGGRGGDRGG------Y 418

Query: 111 RTGRDGSDRGNEVGTGDG 128
              R G   G +  +G G
Sbjct: 419 GGDRSGGGYGGDRSSGGG 436


>gi|239757412 PREDICTED: hypothetical protein XP_002345272 [Homo
           sapiens]
          Length = 564

 Score = 29.6 bits (65), Expect = 1.00
 Identities = 37/138 (26%), Positives = 47/138 (34%), Gaps = 42/138 (30%)

Query: 3   WAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANAL- 61
           W WS+G +L          HP ++       L  QP HS+   AR PH     P   A  
Sbjct: 262 WGWSEGLEL----------HPTHF-------LAWQPDHSRP-LARFPHCPRALPCTAAPS 303

Query: 62  ---------------RSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQ 106
                          R   C GLH A   +   G     ER+R  G  W      G   +
Sbjct: 304 PSTGGGQQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLR-VGRCWPQARGLGRAPR 362

Query: 107 PLQVRTGRDGSDRGNEVG 124
            L+        +RG EVG
Sbjct: 363 HLE-------GERGLEVG 373


>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
           sapiens]
          Length = 944

 Score = 29.6 bits (65), Expect = 1.00
 Identities = 37/138 (26%), Positives = 47/138 (34%), Gaps = 42/138 (30%)

Query: 3   WAWSQGSQLRMCSQPHQWLHPLYWAPASPGLLPTQPPHSQEEYARVPHLFHLAPPANAL- 61
           W WS+G +L          HP ++       L  QP HS+   AR PH     P   A  
Sbjct: 262 WGWSEGLEL----------HPTHF-------LAWQPDHSRP-LARFPHCPRALPCTAAPS 303

Query: 62  ---------------RSASCHGLHNASPGVSPSGGGGDSERVRGSGLRWGHGGDEGGLHQ 106
                          R   C GLH A   +   G     ER+R  G  W      G   +
Sbjct: 304 PSTGGGQQDELGRCGRGRRCRGLHAAGDQLEALGSLHQEERLR-VGRCWPQARGLGRAPR 362

Query: 107 PLQVRTGRDGSDRGNEVG 124
            L+        +RG EVG
Sbjct: 363 HLE-------GERGLEVG 373



 Score = 28.5 bits (62), Expect = 2.2
 Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 9/53 (16%)

Query: 89  RGSGLRWGHGGDEGGLHQPLQVRT---------GRDGSDRGNEVGTGDGQVRA 132
           RG G R G  G   GL  PLQV           G  G  RG     G G VRA
Sbjct: 697 RGRGRRGGRRGRAVGLEVPLQVGVAHEDLAGLPGLGGRGRGGGTRGGGGAVRA 749


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.136    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,362,248
Number of Sequences: 37866
Number of extensions: 485767
Number of successful extensions: 1906
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 1696
Number of HSP's gapped (non-prelim): 313
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.