Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NF-E4 Sequence: fasta or formatted (179aa) NCBI GI: 145976942
Description:

transcription factor NF-E4

Referenced in:

Hematopoiesis and Erythrocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         18           2
 C cysteine            2.2          4           1
 D aspartate           2.8          5           1
 E glutamate           2.2          4           1
 F phenylalanine       0.6          1           1
 G glycine             6.7         12           1
 H histidine           5.6         10           1
 I isoleucine          1.1          2           1
 K lysine              3.9          7           1
 L leucine            13.4         24           3
 M methionine          1.1          2           1
 N asparagine          2.8          5           1
 P proline            10.6         19           2
 Q glutamine           5.6         10           2
 R arginine            5.0          9           1
 S serine             11.7         21           3
 T threonine           7.8         14           1
 V valine              3.9          7           2
 W tryptophan          1.7          3           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription factor NF-E4 
WNK2                  0.023   WNK lysine deficient protein kinase 2 
CD68                  0.020   CD68 antigen isoform B 
CD68                  0.020   CD68 antigen isoform A 
CCDC120               0.020   coiled-coil domain containing 120 isoform 3 
CCDC120               0.020   coiled-coil domain containing 120 isoform 4 
CCDC120               0.020   coiled-coil domain containing 120 isoform 2 
CCDC120               0.020   coiled-coil domain containing 120 isoform 1 
PLXNB1                0.020   plexin B1 
PLXNB1                0.020   plexin B1 
LOC100293930          0.014   PREDICTED: hypothetical protein 
LOC100287415          0.014   PREDICTED: hypothetical protein 
LOC100287415          0.014   PREDICTED: hypothetical protein XP_002343291 
FAM100A               0.014   hypothetical protein LOC124402 
ZMIZ1                 0.014   retinoic acid induced 17 
RERE                  0.014   atrophin-1 like protein isoform b 
RERE                  0.014   atrophin-1 like protein isoform a 
RERE                  0.014   atrophin-1 like protein isoform a 
MUC17                 0.014   mucin 17 
NFATC3                0.012   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.012   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.012   nuclear factor of activated T-cells, cytoplasmic, ca...
NFATC3                0.012   nuclear factor of activated T-cells, cytoplasmic, cal...
LOC100293485          0.012   PREDICTED: hypothetical protein 
DMWD                  0.012   dystrophia myotonica-containing WD repeat motif prot...
IL15RA                0.012   interleukin 15 receptor, alpha isoform 1 precursor [H...
IL15RA                0.012   interleukin 15 receptor, alpha isoform 2 
ATXN7                 0.012   ataxin 7 isoform b 
ATXN7                 0.012   ataxin 7 isoform a 
PRRT1                 0.012   NG5 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press