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Search of human proteins with 239744754
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo
sapiens]
(519 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo ... 1072 0.0
gi|239755949 PREDICTED: hypothetical protein [Homo sapiens] 1069 0.0
gi|239750452 PREDICTED: hypothetical protein [Homo sapiens] 1069 0.0
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 48 2e-05
gi|86991440 splicing factor, arginine/serine-rich 5 [Homo sapiens] 41 0.003
gi|86991438 splicing factor, arginine/serine-rich 5 [Homo sapiens] 41 0.003
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 40 0.004
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.005
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens] 39 0.011
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 39 0.015
gi|239757778 PREDICTED: hypothetical protein [Homo sapiens] 37 0.044
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 37 0.044
gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens] 37 0.057
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 37 0.057
gi|50962882 G patch domain containing 8 [Homo sapiens] 36 0.074
gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens] 36 0.097
gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo sapi... 36 0.097
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 35 0.13
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 35 0.13
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 35 0.13
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 35 0.13
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 35 0.13
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 35 0.13
gi|239755335 PREDICTED: hypothetical protein [Homo sapiens] 34 0.28
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 34 0.28
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 34 0.28
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 34 0.28
gi|50083281 KIAA1853 protein [Homo sapiens] 34 0.28
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 34 0.37
gi|6754638 microtubule-associated protein tau isoform 2 [Homo sa... 34 0.37
>gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo
sapiens]
Length = 519
Score = 1072 bits (2772), Expect = 0.0
Identities = 519/519 (100%), Positives = 519/519 (100%)
Query: 1 MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG 60
MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG
Sbjct: 1 MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG 60
Query: 61 LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG 120
LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG
Sbjct: 61 LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG 120
Query: 121 QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN 180
QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN
Sbjct: 121 QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN 180
Query: 181 HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW 240
HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW
Sbjct: 181 HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW 240
Query: 241 VSLQHQESQVPEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 300
VSLQHQESQVPEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA
Sbjct: 241 VSLQHQESQVPEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 300
Query: 301 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV 360
PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV
Sbjct: 301 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV 360
Query: 361 FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR 420
FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR
Sbjct: 361 FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR 420
Query: 421 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG 480
TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG
Sbjct: 421 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG 480
Query: 481 PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 519
PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP
Sbjct: 481 PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 519
>gi|239755949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 524
Score = 1069 bits (2764), Expect = 0.0
Identities = 518/519 (99%), Positives = 518/519 (99%)
Query: 1 MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG 60
MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG
Sbjct: 6 MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG 65
Query: 61 LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG 120
LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG
Sbjct: 66 LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG 125
Query: 121 QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN 180
QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN
Sbjct: 126 QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN 185
Query: 181 HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW 240
HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW
Sbjct: 186 HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW 245
Query: 241 VSLQHQESQVPEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 300
VSLQHQESQV EGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA
Sbjct: 246 VSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 305
Query: 301 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV 360
PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV
Sbjct: 306 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV 365
Query: 361 FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR 420
FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR
Sbjct: 366 FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR 425
Query: 421 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG 480
TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG
Sbjct: 426 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG 485
Query: 481 PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 519
PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP
Sbjct: 486 PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 524
>gi|239750452 PREDICTED: hypothetical protein [Homo sapiens]
Length = 524
Score = 1069 bits (2764), Expect = 0.0
Identities = 518/519 (99%), Positives = 518/519 (99%)
Query: 1 MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG 60
MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG
Sbjct: 6 MGTGTRTEVQPVDGRALPPPAHLLLHDGHGGPRQQEGLQWDQVPERVLHLVTAGDDLSPG 65
Query: 61 LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG 120
LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG
Sbjct: 66 LVGSAEEDSPWGGRDEDGGAVTQGLWPGTRDRTVRGHPRRPRASKPTNSMRHFHPYPGDG 125
Query: 121 QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN 180
QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN
Sbjct: 126 QSRGSIRSLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKN 185
Query: 181 HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW 240
HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW
Sbjct: 186 HFYVGGGDRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQW 245
Query: 241 VSLQHQESQVPEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 300
VSLQHQESQV EGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA
Sbjct: 246 VSLQHQESQVSEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 305
Query: 301 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV 360
PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV
Sbjct: 306 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQFSQETV 365
Query: 361 FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR 420
FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR
Sbjct: 366 FCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHR 425
Query: 421 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG 480
TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG
Sbjct: 426 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMG 485
Query: 481 PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 519
PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP
Sbjct: 486 PSLHTGVGICCRNFQRYRILHISCRLRISSPEIPCGRWP 524
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 47.8 bits (112), Expect = 2e-05
Identities = 82/361 (22%), Positives = 126/361 (34%), Gaps = 28/361 (7%)
Query: 131 LASSSAEALGICK---MVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSK-NHFYVGG 186
L+ AE + + K + G E SS D ++ SR S+ +S K N G
Sbjct: 435 LSPGQAERVSVGKAGTVSPGKEDPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVSSGP 494
Query: 187 GD-RFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQWVSLQH 245
GD R L +A++AEP G GD + + G G+AA
Sbjct: 495 GDPRSLGTAGPPSAVKAEPAT-----GGKGDPLSSEKAGLVASGKAAPTASGKAEPLAVG 549
Query: 246 QESQVPEG-----PQAGDHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGA 300
+E V +G P ++ + +VV + V G +++G E P +
Sbjct: 550 KEDPVSKGKADAGPSGQGDSVSIGKVVSTPGKTVPVPSGKVDPVSLGKAEAIPEGKVGSL 609
Query: 301 PLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEG----VCDRQRVPDGQFS 356
PL P+ T SG P G E G VC ++ P
Sbjct: 610 PLEKGSPVTTTKADPRASGKAQPQSGGKAETKLPGQEGAAAPGEAGAVCLKKETPQASEK 669
Query: 357 QETVFCIRVVQQSPG-----GVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKA 411
+ C + + G + AD A S + LS +K PSS S +
Sbjct: 670 VDPGSCRKAEPLASGKGEPVSLGKADSAPSRKTESPSLGKVVPLSLEKTKPSSSSRQLDR 729
Query: 412 RLILHCRHRTGTRADTASASARARPRSRSRSRA---AESQARPQTRTRTRTRTTPPWPGP 468
+ + R G R +A P S + + + + +A R+ PP PGP
Sbjct: 730 KALGSARSPEGARGSEGRVEPKAEPVSSTEASSLGQKDLEAAGAERSPCPEAAAPP-PGP 788
Query: 469 R 469
R
Sbjct: 789 R 789
>gi|86991440 splicing factor, arginine/serine-rich 5 [Homo sapiens]
Length = 272
Score = 40.8 bits (94), Expect = 0.003
Identities = 21/46 (45%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 416 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 461
H R R+ +R+ T S+S R+R RSRSRSR + S++R ++R+R+R+++
Sbjct: 183 HSRSRSRSRSRTRSSS-RSRSRSRSRSRKSYSRSRSRSRSRSRSKS 227
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 387 LSGAHHILLSGDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRA 444
++G L+ G K S S R ++R R R+ +R+ + + +R+R RSRSRSR+
Sbjct: 169 INGRKIKLIEGSKRHSRSRS-RSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS 225
Score = 29.3 bits (64), Expect = 9.1
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Query: 424 RADTASASARARPRS------RSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTP 477
R + + +R+R RS RSRSR+ +S +R ++R+R+R+R+ + + +R+P
Sbjct: 182 RHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS-------KSRSVSRSP 234
Query: 478 VMGPSLHTG 486
V S G
Sbjct: 235 VPEKSQKRG 243
>gi|86991438 splicing factor, arginine/serine-rich 5 [Homo sapiens]
Length = 272
Score = 40.8 bits (94), Expect = 0.003
Identities = 21/46 (45%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Query: 416 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 461
H R R+ +R+ T S+S R+R RSRSRSR + S++R ++R+R+R+++
Sbjct: 183 HSRSRSRSRSRTRSSS-RSRSRSRSRSRKSYSRSRSRSRSRSRSKS 227
Score = 30.4 bits (67), Expect = 4.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 387 LSGAHHILLSGDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRA 444
++G L+ G K S S R ++R R R+ +R+ + + +R+R RSRSRSR+
Sbjct: 169 INGRKIKLIEGSKRHSRSRS-RSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS 225
Score = 29.3 bits (64), Expect = 9.1
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Query: 424 RADTASASARARPRS------RSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTP 477
R + + +R+R RS RSRSR+ +S +R ++R+R+R+R+ + + +R+P
Sbjct: 182 RHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS-------KSRSVSRSP 234
Query: 478 VMGPSLHTG 486
V S G
Sbjct: 235 VPEKSQKRG 243
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 40.4 bits (93), Expect = 0.004
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 128 SLNLASSSAEALGICKMVEGPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKNHFYVGGG 187
+L A++SA A G GP++ SS P ++ + S+ P+T S+ + +H G G
Sbjct: 120 TLAAAATSAPAPGA---PGGPQLAGSSAGPVTA-APSQPPTTCSSRFRVIKLDH---GSG 172
Query: 188 DRFLLVGCTLTAIEAEPPEEMLLIGRHGDVVQHAELGQAVDGEAAVVGHQGQWVSLQHQE 247
+ + T + +L R GD ++H+ + +G G V +
Sbjct: 173 EPYRRGRWTCMEYYERDSDSSVLT-RSGDCIRHSSTFDQTAERDSGLGATGGSVVVVVAS 231
Query: 248 SQVPEGPQAG-DHALQVCQVVEAQVQGDEVGPGSTATLTVGVTETPPPTSLHGAPLFLAK 306
Q GP++G D +L + + + P + +VG + PPP + GA +
Sbjct: 232 MQGAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPQSFSVGQPQPPPPP-VGGAVAQSSA 290
Query: 307 PLIPTPPA 314
PL P P A
Sbjct: 291 PLPPFPGA 298
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.0 bits (92), Expect = 0.005
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 396 SGDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRT 455
SG S R ++R + R R G+ + S + + R+ SR R S+ P +R
Sbjct: 1791 SGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRK 1850
Query: 456 RTRTRTTP-PWPGPRCPATART 476
R+R+RT+P PW R A+ T
Sbjct: 1851 RSRSRTSPAPWKRSRSRASPAT 1872
Score = 35.8 bits (81), Expect = 0.097
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 397 GDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTR 456
G P P + R R+ R + S S R RSRSR+ A ++R +T R
Sbjct: 532 GRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPAR 591
Query: 457 TRTRTTPPWPGPRCPATARTP 477
R+R+ P R + +RTP
Sbjct: 592 RRSRSRTP---TRRRSRSRTP 609
Score = 33.1 bits (74), Expect = 0.63
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 404 SPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 461
+P+ R ++R R R+ +R T R R RSR+ +R S++R R R+RTR+
Sbjct: 577 TPARRGRSRSRTPARRRSRSRTPT-----RRRSRSRTPARRGRSRSRTPARRRSRTRS 629
Score = 33.1 bits (74), Expect = 0.63
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 403 SSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTT 462
SSP + K R L R R+G+ + S S + RSRS S + E + +P+ R ++ +
Sbjct: 1561 SSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGS-SPEVKDKPRAAPRAQSGSD 1619
Query: 463 PPWPGPRCPATARTP 477
P P+ PA P
Sbjct: 1620 SS-PEPKAPAPRALP 1633
Score = 32.3 bits (72), Expect = 1.1
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 403 SSPSLRKKARLILHCRH---------RTGTRADTASASARARPRSRSRS-RAAESQARPQ 452
SSP L +KARL R RT R + + + P +SRS R S + P+
Sbjct: 1693 SSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPR 1752
Query: 453 TRTRTRTRTTPPWPGPR 469
T+T +R R P P PR
Sbjct: 1753 TKTTSR-RGRSPSPKPR 1768
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 402 PSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRT------ 455
P+ R ++ + R R+ R S S R RSRSR + R ++RT
Sbjct: 620 PARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSG 679
Query: 456 RTRTRTTPPWPGPRCPATARTPVMGPS 482
R+R+RT P R + +RTP G S
Sbjct: 680 RSRSRT----PARRGRSRSRTPRRGRS 702
Score = 31.6 bits (70), Expect = 1.8
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 403 SSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRS----RAAESQARPQTRTRTR 458
+SP R+++R R R + AS +R RSRSR+ R P TR R+R
Sbjct: 1892 TSPVSRRRSR----SRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1947
Query: 459 TRTTPPWPGPRCPATARTP 477
+RT P R + +RTP
Sbjct: 1948 SRTPPV---TRRRSRSRTP 1963
Score = 31.6 bits (70), Expect = 1.8
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 408 RKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTP 463
R +A + R R+ T T S P +R RSR S+ P TR R+R+RT P
Sbjct: 1912 RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR---SRTPPVTRRRSRSRTPP 1964
Score = 31.6 bits (70), Expect = 1.8
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 17/88 (19%)
Query: 404 SPSLRKKARL----ILHCRHRTGT-----RADTASASARARPRSRSRS-----RAAESQA 449
+P+ R+++R + R R+ T R + S R RSRSR+ R + S+
Sbjct: 1939 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRT 1998
Query: 450 RPQTRTRTRTRTTPPWPGPRCPATARTP 477
P TR R+R+RT+P R + +RTP
Sbjct: 1999 SPVTRRRSRSRTSPV---TRRRSRSRTP 2023
Score = 31.6 bits (70), Expect = 1.8
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 405 PSLRKKARLILHCRHRTGTRADTASASARARPRSRSRS-----RAAESQARPQTRTRTRT 459
P R+++R R +R+ T+ + R RSRSR+ R + S+ P TR R+R+
Sbjct: 1964 PVTRRRSRSRTSPITRRRSRSRTSPVTRR---RSRSRTSPVTRRRSRSRTSPVTRRRSRS 2020
Query: 460 RTTPPWPGPRCPATARTPVM 479
RT P R + +RTP++
Sbjct: 2021 RTP---PAIRRRSRSRTPLL 2037
Score = 30.8 bits (68), Expect = 3.1
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 408 RKKARLILHCRHRTGTRADTASAS-ARARPRSRSRSRA--------AESQARPQTRTRTR 458
R +A H R R+ T + S +R P SR RSR+ + S+A P +R R+R
Sbjct: 1865 RSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSR 1924
Query: 459 TRTTPPWPGPRCPATARTP 477
+RT P R + +RTP
Sbjct: 1925 SRTPPV---TRRRSRSRTP 1940
Score = 30.4 bits (67), Expect = 4.1
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 418 RHRTGTRADTASASARARPRSRSRSRAAESQAR---PQTRTRTRTRTTPPWPGPR 469
R R+ +R T +R+R RSR+A+ R PQ R R+R+ P W R
Sbjct: 492 RGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSR 546
Score = 30.0 bits (66), Expect = 5.3
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 403 SSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTT 462
SSP + K+R R R+ + + AR RSRS S + E+++R R R +
Sbjct: 1674 SSPEPKTKSRT--PPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVS 1731
Query: 463 PPWPGPRCPATAR 475
P P + ++ R
Sbjct: 1732 SPEPAEKSRSSRR 1744
Score = 29.6 bits (65), Expect = 7.0
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 389 GAHHILLSGDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQ 448
G+H + S S K+ + H R R+ + + + R R RSR+ ++ S+
Sbjct: 448 GSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSR 507
Query: 449 AR-PQTRTRTRTRTTPPWPGPRCP 471
+R PQ R R+R+ W R P
Sbjct: 508 SRSPQWR---RSRSAQRWGRSRSP 528
Score = 29.6 bits (65), Expect = 7.0
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 403 SSPSLRKKARLILHCRHRTGTRA----------DTASASARARPRSRSRSRAAESQARPQ 452
SSP + A L R R+G+ + + +S P+SR+ R + S P+
Sbjct: 1620 SSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPK 1679
Query: 453 TRTRTRTRTTPPWPGPRCPATAR 475
T++RT R P AR
Sbjct: 1680 TKSRTPPRRRSSRSSPELTRKAR 1702
Score = 29.6 bits (65), Expect = 7.0
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 396 SGDKLPPSSPSLRKKARLILHCRHRTGT----RADTASASARARPRSRSRSRAAESQARP 451
S + PP S + R+ +R + ++ T R+ +S + R RSR+A S
Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPET 1716
Query: 452 QTRTRTRTRTTPPWPGPRCPATART 476
++RT R R +P P +R+
Sbjct: 1717 RSRTPPRHRRSPSVSSPEPAEKSRS 1741
>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
Length = 221
Score = 38.9 bits (89), Expect = 0.011
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 13/74 (17%)
Query: 404 SPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRS-------------RAAESQAR 450
SP R+++R R R+ +R+ + + +R+R RSRSRS ++ S++R
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 451 PQTRTRTRTRTTPP 464
++R+R+R+R+ PP
Sbjct: 181 SRSRSRSRSRSPPP 194
Score = 37.0 bits (84), Expect = 0.044
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 418 RHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRT 459
R R+ R + + +R+R RSRSRSR + S++R +TR+R+R+
Sbjct: 118 RSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS 159
Score = 34.7 bits (78), Expect = 0.22
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 408 RKKARLILHCRHRTGTRADTASAS---ARARPRSRSRSRAAESQARPQTRTRTRTRTTPP 464
R ++R + R+ R+ + S+S +R+R RSRSRSR+ ++ ++++R+R+++ P
Sbjct: 152 RTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPK 211
Query: 465 WP 466
P
Sbjct: 212 SP 213
Score = 34.3 bits (77), Expect = 0.28
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 423 TRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 461
+R+ +R+R RSRSRSR+ +R ++R+RTR+R+
Sbjct: 119 SRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRS 157
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 38.5 bits (88), Expect = 0.015
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 37/224 (16%)
Query: 292 PPPTSLHGAPLFLAKP-----------LIPTPPALEISGGLYPPGTDLL--VYYPQGPEV 338
PPP +G P + + L+P P ++ GL P L Y P P+
Sbjct: 614 PPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPK- 672
Query: 339 GVEEGVCDRQRVPDGQFSQETVFCIRVVQQSPGGVAAADQA---QQGLHRLLSGAHHILL 395
D + P S+ + + P + Q GL+
Sbjct: 673 -------DIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARR 725
Query: 396 -SGDKLPPSSPSL-RKKARLILHCRHRTGTRADTASAS---------ARARPRSRSRSRA 444
G + S PS R +++ R+ +R+ +S S +R+ RSRSRSR+
Sbjct: 726 RKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRS 785
Query: 445 AESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMGPSLHTGVG 488
+R ++R+++R+R+ PG R + +R+P P G+G
Sbjct: 786 RSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPT--PPSSAGLG 827
>gi|239757778 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 37.0 bits (84), Expect = 0.044
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 418 RHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTP 477
R TGT T + A A P +R R+R P++RTRT TTPP CP A
Sbjct: 30 RTSTGTGTSTRTIPAPA-PSARRRARPKPGAQLPRSRTRTPAWTTPP---TACPNGASVL 85
Query: 478 VMGPS 482
GPS
Sbjct: 86 SGGPS 90
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 37.0 bits (84), Expect = 0.044
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 418 RHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGP---RCPATA 474
RH + +R+ ++ + + +R RS +RSR+ S + Q+R+R+R+R+ P P P + A
Sbjct: 487 RHHSSSRSRSSWSLSPSRSRSLTRSRS-HSPSPSQSRSRSRSRSQSPSPSPAREKLTRPA 545
Query: 475 RTPVMGPSL 483
+P +G L
Sbjct: 546 ASPAVGEKL 554
>gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]
Length = 288
Score = 36.6 bits (83), Expect = 0.057
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 416 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 461
H R+ ++ D+ + +++R RS SRSR+ S R TR+R+R+R+
Sbjct: 32 HTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRS 77
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 36.6 bits (83), Expect = 0.057
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 29/149 (19%)
Query: 357 QETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL- 415
+ TV C+ VV+ P + D Q HR++ + SS RKKA+
Sbjct: 956 ERTVTCVTVVE--PEAPPSPDVLQAATHRVVE----LRPPSRSRSTSSSRSRKKAKRKRV 1009
Query: 416 ---HCRHRTGTRADTASASARA--------RPR-----------SRSRSRAAESQARPQT 453
H R R+GTR+++ S+R+ RPR S RS + E R +
Sbjct: 1010 SREHGRTRSGTRSESRDRSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKA 1069
Query: 454 RTRTRTRTTPPWPGPRCPATARTPVMGPS 482
+ ++R PW R + +R+ G S
Sbjct: 1070 KDKSREHRRGPWGHSRRTSRSRSGSPGSS 1098
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 416 HCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATAR 475
H R R+ R D + A R R + RSR+ S+ R + R R+R WP R + R
Sbjct: 1136 HQRERSHERPDRKESVAWPRDRRKRRSRSPSSEHRAREHRRPRSR--EKWPQTRSHSPER 1193
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 36.2 bits (82), Expect = 0.074
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 376 ADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHRTGTRADTASAS-ARA 434
+D + + S H S D S R ++R H R R+ +R + S+S +R+
Sbjct: 911 SDDSDYASSKHRSKRHKYSSSDDDYSLSCSQSRSRSRS--HTRERSRSRGRSRSSSCSRS 968
Query: 435 RPRSRSRSRAAESQARPQTRTRTRTRTT 462
R + RSRS A S R ++ +R R+R+T
Sbjct: 969 RSKRRSRSTTAHSWQRSRSYSRDRSRST 996
>gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens]
Length = 771
Score = 35.8 bits (81), Expect = 0.097
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 374 AAADQAQQGLHRLLSGA---HHILLSGDKLPPSSPSLRKKARLILHCRHRTG-TRADTAS 429
AAA + H +S A H+ ++G P+ R + L L H + D A
Sbjct: 599 AAAPATEGRAHPAVSRACSTPHVQVAGKA---ERPTARSEQYLTLSGAHDLSESELDVAG 655
Query: 430 ASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMGP 481
+RA P+ + RP R R PP+PGP PA A + GP
Sbjct: 656 LQSRATPQCQ----------RPHGSGRDDKRPPPPYPGPGKPAAAAAWIQGP 697
>gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo
sapiens]
Length = 974
Score = 35.8 bits (81), Expect = 0.097
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 374 AAADQAQQGLHRLLSGA---HHILLSGDKLPPSSPSLRKKARLILHCRHRTG-TRADTAS 429
AAA + H +S A H+ ++G P+ R + L L H + D A
Sbjct: 802 AAAPATEGRAHPAVSRACSTPHVQVAGKA---ERPTARSEQYLTLSGAHDLSESELDVAG 858
Query: 430 ASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCPATARTPVMGP 481
+RA P+ + RP R R PP+PGP PA A + GP
Sbjct: 859 LQSRATPQCQ----------RPHGSGRDDKRPPPPYPGPGKPAAAAAWIQGP 900
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 35.4 bits (80), Expect = 0.13
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 363 IRVVQQSPGGVAAADQAQQGLH-RLLSGAHHILLSGDKLPPSSPSLRKKARLILHCRHRT 421
IR+V+ PG ++ H R S + H S + SS S K+R R R+
Sbjct: 170 IRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSR-SGSSKSSHSKSR----SRSRS 224
Query: 422 GTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 461
G+R+ +++R RS+SRSR+ + ++R ++ ++R+R+
Sbjct: 225 GSRS-----RSKSRSRSQSRSRSKKEKSRSPSKEKSRSRS 259
Score = 31.2 bits (69), Expect = 2.4
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 402 PSSPSLRKKARLILHCRHRTGTRADTAS-----ASARARPRSRSRSRAAESQARPQTRTR 456
P S R +R H R R+ +R S +S + +SRSRSR+ S++R ++R+R
Sbjct: 177 PGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSG-SRSRSKSRSR 235
Query: 457 TRTRTTPPWPGPRCPATART 476
+++R+ R P+ ++
Sbjct: 236 SQSRSRSKKEKSRSPSKEKS 255
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 35.4 bits (80), Expect = 0.13
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 64 SAEEDSPWGGRDEDGGAVTQGLWPGTRDRTV---RGHPR-RPRASKPTNSMRHFHPYPGD 119
S S DED TQ L PG R V HPR P+AS S D
Sbjct: 992 STARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKESSRISD 1051
Query: 120 GQSR-----------GSIRSLNLASSSAEALGICKMVEG--PEMTDSSDSPDSSTSDSRD 166
G+ + G++ + + S+S +A G K+ + PE+ ++ +P+SS DS D
Sbjct: 1052 GKKQEGPATQVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESS-DDSED 1110
Query: 167 PSTSST 172
S SS+
Sbjct: 1111 SSDSSS 1116
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
sapiens]
Length = 1450
Score = 35.4 bits (80), Expect = 0.13
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 64 SAEEDSPWGGRDEDGGAVTQGLWPGTRDRTV---RGHPR-RPRASKPTNSMRHFHPYPGD 119
S S DED TQ L PG R V HPR P+AS S D
Sbjct: 992 STARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTAHPRIAPKASMAGASSSKESSRISD 1051
Query: 120 GQSR-----------GSIRSLNLASSSAEALGICKMVEG--PEMTDSSDSPDSSTSDSRD 166
G+ + G++ + + S+S +A G K+ + PE+ ++ +P+SS DS D
Sbjct: 1052 GKKQEGPATQVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAPESS-DDSED 1110
Query: 167 PSTSST 172
S SS+
Sbjct: 1111 SSDSSS 1116
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 35.4 bits (80), Expect = 0.13
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 397 GDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTR 456
G+K SLR +++ H+ +R T+ + +RAR RS S+S++ SQ R ++R+R
Sbjct: 1812 GEKEKKRDSSLRSRSKRSKSSEHK--SRKRTSESRSRARKRS-SKSKSHRSQTRSRSRSR 1868
Query: 457 TRTRTT 462
R R++
Sbjct: 1869 RRRRSS 1874
Score = 30.8 bits (68), Expect = 3.1
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 419 HRTGTRADTASASARARPRSRSRSRAAES----------QARPQTRTRTRTRTTPPWPGP 468
HR+ TR+ + S R RSRS+SR S + R ++R R R R++
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Query: 469 RCPATARTPVMGPSLHT 485
A +RTP HT
Sbjct: 1917 TVRARSRTPSRRSRSHT 1933
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 35.4 bits (80), Expect = 0.13
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 397 GDKLPPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTR 456
G+K SLR +++ H+ +R T+ + +RAR RS S+S++ SQ R ++R+R
Sbjct: 1812 GEKEKKRDSSLRSRSKRSKSSEHK--SRKRTSESRSRARKRS-SKSKSHRSQTRSRSRSR 1868
Query: 457 TRTRTT 462
R R++
Sbjct: 1869 RRRRSS 1874
Score = 30.8 bits (68), Expect = 3.1
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 419 HRTGTRADTASASARARPRSRSRSRAAES----------QARPQTRTRTRTRTTPPWPGP 468
HR+ TR+ + S R RSRS+SR S + R ++R R R R++
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Query: 469 RCPATARTPVMGPSLHT 485
A +RTP HT
Sbjct: 1917 TVRARSRTPSRRSRSHT 1933
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 35.4 bits (80), Expect = 0.13
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 291 TPPPTSLHGAPLFLAKPLIPTPPALEISGGLYPPGTDLLVYYPQGPEVGVEEGVCDR-QR 349
TPPPT LH P +P P PP PP T +V P P + + + +R +
Sbjct: 921 TPPPT-LHLVP----EPAAPPPP---------PPRTFQMVTTPF-PALPQPKALLERFHQ 965
Query: 350 VPDGQFSQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPS 406
VP G ++Q GG AA Q L L S A +L+SG + P +P+
Sbjct: 966 VPSGI----------ILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSG-QAPSGTPT 1011
Score = 30.0 bits (66), Expect = 5.3
Identities = 60/250 (24%), Positives = 81/250 (32%), Gaps = 49/250 (19%)
Query: 242 SLQHQESQVPEGPQAGDHALQVCQVVEAQVQGDEVGPGSTATLTV--GVTETPPPTSLHG 299
SL Q P GP A +QG + P + A L G+ + P + G
Sbjct: 565 SLPTQSQPAPAGPAA-----------TTVLQGVTLPPSAVAMLNTPDGLVQPATPAAATG 613
Query: 300 --APLFLAKPLIPTPPALE--ISGGLYPPGTDLLVYYPQGPEVGVEEGVCDRQRVPDGQF 355
AP+ +P PPA+ + GL P P P+ Q P
Sbjct: 614 EAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPT-PQAAAPPQATTPQPSPGLAS 672
Query: 356 SQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKLPPSSPSLRKKARLIL 415
S E + V+ Q P A Q L L S L P L A +I+
Sbjct: 673 SPEKI----VLGQPPSATPTAILTQDSLQMFLPQER----SQQPLSAEGPHLSVPASVIV 724
Query: 416 HCRHRTGTRADTASASARARPRSRSRS---RAAESQARPQTRTRTRTRTTPPWPGPRCPA 472
+ A A A P ++ +A +SQA P P P+ PA
Sbjct: 725 -------SAPPPAQDPAPATPVAKGAGLGPQAPDSQASPA-------------PAPQIPA 764
Query: 473 TARTPVMGPS 482
A GPS
Sbjct: 765 AAPLKGPGPS 774
>gi|239755335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 515
Score = 34.3 bits (77), Expect = 0.28
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 147 GPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKNHFYVGGGDRFLLVGCTLTAIEAEPPE 206
G + T + + SS+S + P+TSST+ ++ +HF G GD+ L G L ++ A+ PE
Sbjct: 172 GSQGTQEAPTNLSSSSQAPSPATSSTHPQTPVPSHFQ-GLGDQSLSPG-NLGSL-AKKPE 228
Query: 207 EMLLIGRHGDVVQ---HAELG-QAVDGEAAVVGHQGQWVSLQHQESQVPEGPQAGDHALQ 262
+ G H + + AE G + + V G + H V G H
Sbjct: 229 GLAERGAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQD 288
Query: 263 VCQVVE-AQVQGDEVGPGSTAT----LTVGVTETPPPTSLHGAPLFLAKP 307
CQ + A+ G ++GP ++ + +P P++L G P L +P
Sbjct: 289 QCQGGKVAEPHGRDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQP 338
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 34.3 bits (77), Expect = 0.28
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 423 TRADTASASARARPRSRSRSRAAESQARPQTRTRTRTR 460
+R+ + + +R+RPR RS SR++E + +TR+R+R R
Sbjct: 99 SRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDR 136
Score = 30.8 bits (68), Expect = 3.1
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 418 RHRTGTRADTASASARARPRSRSRSRAAESQ-ARPQTRTRTRTRTTP 463
RHR+ + + S R+R RSR R ++ Q +R ++RTR R+R+ P
Sbjct: 67 RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRP 112
Score = 30.0 bits (66), Expect = 5.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 400 LPPSSPSLRKKARLILHCRHRTGTRADTASASARAR------PRSRSRSRAAESQARPQT 453
L P S S ++ R G+R + + +R R RSRS+SR S++RP+
Sbjct: 55 LQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL 114
Query: 454 RTRTRT 459
R+ +R+
Sbjct: 115 RSHSRS 120
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 34.3 bits (77), Expect = 0.28
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 421 TGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRTTPPWPGPRCP 471
T T T + + R R+ +R + R TRT T T TP P P CP
Sbjct: 1463 TTTPRPTTATTRRTTTTRRTTTRRPTTTVRTTTRTTTTTTPTPTTPIPTCP 1513
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 34.3 bits (77), Expect = 0.28
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 388 SGAHHILLSGDKLPPSSPSLRKKARLILHCRHRT-GTRADTASASARARPRSRSRSRAAE 446
SG HH L S + LP SP+ CR ADT ++ A P S S + A
Sbjct: 1094 SGLHHSLSSSESLP-GSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAA 1152
Query: 447 S----------------QARPQTRTRTRTRTTPPWPGPRCPATARTPVMGPS 482
+ RP+T R T + PP P CP + P PS
Sbjct: 1153 AGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPPSP-LACPPISAPPPRSPS 1203
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 34.3 bits (77), Expect = 0.28
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 428 ASASARARPRSRSRSRA-AESQARPQTRTRTRTRTTPPWPGPRCPATART 476
+S+S+R+ RS SRSR+ + S+ R +TRT + + + P PG R + +R+
Sbjct: 538 SSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRS 587
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 401 PPSSPSLRKKARLILHCRHRTGTRADTASAS-ARARPRSRSRSRAAESQARPQTRTRTRT 459
P SS SL + R+ +R+ + S S +R+R RSR+R+ ++ S P +R+R+
Sbjct: 524 PSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRS 583
Query: 460 RT 461
R+
Sbjct: 584 RS 585
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 408 RKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAESQARPQTRT 455
R ++R R RT + + + S S +R RSRSRSR + S++R Q+R+
Sbjct: 553 RSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRSR-SRSRSRSQSRS 599
Score = 30.4 bits (67), Expect = 4.1
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Query: 418 RHRTGTRADTASASARARPRSRSRSRAAESQARPQTRTRTRTRT 461
R R+ TR ++S+S P SRSRSR+ ++R+R+R+R+
Sbjct: 559 RRRSRTRTSSSSSSRSPSPGSRSRSRS-------RSRSRSRSRS 595
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 33.9 bits (76), Expect = 0.37
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 396 SGDKLPPSSPSLRKKARLILHCRHRTGTRADTAS-------ASARARPRSRSRSRA-AES 447
S + P SS ++ ++I+ R ++ + + +S AS R+RP+S S+SR+ S
Sbjct: 231 SDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRS 290
Query: 448 QARPQTRTRTRTRTTPPWPGPRCPATART 476
++ Q RT +R R + W A +RT
Sbjct: 291 RSGSQKRTHSRVR-SHSWKRNHSRARSRT 318
>gi|6754638 microtubule-associated protein tau isoform 2 [Homo
sapiens]
Length = 441
Score = 33.9 bits (76), Expect = 0.37
Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
Query: 341 EEGVCDRQRVPDGQFSQETVFCIRVVQQSPGGVAAADQAQQGLHRLLSGAHHILLSGDKL 400
E G+ D + D T R+V +S G + D+ +G G I
Sbjct: 105 EAGIGDTPSLEDEAAGHVTQ--ARMVSKSKDGTGSDDKKAKGA----DGKTKIATPRGAA 158
Query: 401 PPSSPSLRKKARLILHCRHRTGTRADTASASARARPRSRSRSRAAE--SQARPQTRTRTR 458
PP R+ +T T +S P+S RS + S P +R+RT
Sbjct: 159 PPGQKGQANATRIPA----KTPPAPKTPPSSGEP-PKSGDRSGYSSPGSPGTPGSRSRTP 213
Query: 459 TRTTPPWPGPRCPATARTPVMGPS 482
+ TPP P+ A RTP PS
Sbjct: 214 SLPTPPTREPKKVAVVRTPPKSPS 237
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,578,740
Number of Sequences: 37866
Number of extensions: 1439938
Number of successful extensions: 7825
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 6739
Number of HSP's gapped (non-prelim): 973
length of query: 519
length of database: 18,247,518
effective HSP length: 107
effective length of query: 412
effective length of database: 14,195,856
effective search space: 5848692672
effective search space used: 5848692672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.