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Search of human proteins with 239744221
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744221 PREDICTED: hypothetical protein XP_002343077 [Homo
sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755437 PREDICTED: hypothetical protein [Homo sapiens] 402 e-112
gi|239744221 PREDICTED: hypothetical protein XP_002343077 [Homo ... 402 e-112
gi|239749918 PREDICTED: hypothetical protein XP_002347213 [Homo ... 191 5e-49
gi|122937424 one cut homeobox 3 [Homo sapiens] 38 0.006
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 35 0.055
gi|119395750 keratin 1 [Homo sapiens] 32 0.27
gi|52218860 olfactory receptor, family 11, subfamily H, member 6... 32 0.27
gi|55956899 keratin 9 [Homo sapiens] 32 0.47
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 32 0.47
gi|4502565 calpain, small subunit 1 [Homo sapiens] 31 0.79
gi|51599151 calpain, small subunit 1 [Homo sapiens] 31 0.79
gi|124107614 PR domain containing 13 [Homo sapiens] 31 0.79
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 30 1.0
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 30 1.0
gi|119395754 keratin 5 [Homo sapiens] 30 1.4
gi|109255251 loricrin [Homo sapiens] 30 1.4
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 30 1.4
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 30 1.4
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 30 1.4
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 30 1.8
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 30 1.8
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 30 1.8
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 30 1.8
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 30 1.8
gi|4505531 oxysterol binding protein [Homo sapiens] 30 1.8
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 29 2.3
gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens] 29 2.3
gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens] 29 2.3
gi|167466169 growth arrest-specific 1 [Homo sapiens] 29 2.3
gi|47132620 keratin 2 [Homo sapiens] 29 2.3
>gi|239755437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 402 bits (1033), Expect = e-112
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MNANRSTALLTPRFSLVCSPWGTGAVCRSPQTHIANDTVLSGVDTRYPNYLKPGRRSEDS 60
MNANRSTALLTPRFSLVCSPWGTGAVCRSPQTHIANDTVLSGVDTRYPNYLKPGRRSEDS
Sbjct: 1 MNANRSTALLTPRFSLVCSPWGTGAVCRSPQTHIANDTVLSGVDTRYPNYLKPGRRSEDS 60
Query: 61 LAGCSLLDAPSTVRLLCSPGKDNGPLLSDAIRLLELTVPSGHWGSPRASLTLSDIFTGHT 120
LAGCSLLDAPSTVRLLCSPGKDNGPLLSDAIRLLELTVPSGHWGSPRASLTLSDIFTGHT
Sbjct: 61 LAGCSLLDAPSTVRLLCSPGKDNGPLLSDAIRLLELTVPSGHWGSPRASLTLSDIFTGHT 120
Query: 121 DTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS 180
DTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS
Sbjct: 121 DTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS 180
Query: 181 PGPAGSGGEKVSSSGSGRA 199
PGPAGSGGEKVSSSGSGRA
Sbjct: 181 PGPAGSGGEKVSSSGSGRA 199
>gi|239744221 PREDICTED: hypothetical protein XP_002343077 [Homo
sapiens]
Length = 199
Score = 402 bits (1033), Expect = e-112
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MNANRSTALLTPRFSLVCSPWGTGAVCRSPQTHIANDTVLSGVDTRYPNYLKPGRRSEDS 60
MNANRSTALLTPRFSLVCSPWGTGAVCRSPQTHIANDTVLSGVDTRYPNYLKPGRRSEDS
Sbjct: 1 MNANRSTALLTPRFSLVCSPWGTGAVCRSPQTHIANDTVLSGVDTRYPNYLKPGRRSEDS 60
Query: 61 LAGCSLLDAPSTVRLLCSPGKDNGPLLSDAIRLLELTVPSGHWGSPRASLTLSDIFTGHT 120
LAGCSLLDAPSTVRLLCSPGKDNGPLLSDAIRLLELTVPSGHWGSPRASLTLSDIFTGHT
Sbjct: 61 LAGCSLLDAPSTVRLLCSPGKDNGPLLSDAIRLLELTVPSGHWGSPRASLTLSDIFTGHT 120
Query: 121 DTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS 180
DTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS
Sbjct: 121 DTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS 180
Query: 181 PGPAGSGGEKVSSSGSGRA 199
PGPAGSGGEKVSSSGSGRA
Sbjct: 181 PGPAGSGGEKVSSSGSGRA 199
>gi|239749918 PREDICTED: hypothetical protein XP_002347213 [Homo
sapiens]
Length = 122
Score = 191 bits (484), Expect = 5e-49
Identities = 96/96 (100%), Positives = 96/96 (100%)
Query: 104 GSPRASLTLSDIFTGHTDTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGL 163
GSPRASLTLSDIFTGHTDTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGL
Sbjct: 27 GSPRASLTLSDIFTGHTDTVIIVGSLLRALGSHNFFVAVSLPGGGGSGADFSLLGAFLGL 86
Query: 164 VALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSGRA 199
VALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSGRA
Sbjct: 87 VALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSGRA 122
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 37.7 bits (86), Expect = 0.006
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 133 LGSHNFFVAVSLPGGGG-SGADFSLLGAFLGLVALLGGLGSCGRRS--HSSPGPAGSGG 188
LG +A LPGGGG +G+ + G+ GL+A LGGL + G GP GSGG
Sbjct: 252 LGRAEDALARGLPGGGGGTGSGGAGSGSAAGLLAPLGGLAAAGAHGPHGGGGGPGGSGG 310
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 34.7 bits (78), Expect = 0.055
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
GGGG G S G G A +G +G S S GP GSGG G+G
Sbjct: 32 GGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAG 83
Score = 27.3 bits (59), Expect = 8.8
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
GGG G+ + +F GG G G S+ GP G+GG K S G
Sbjct: 8 GGGPGGSGRARTSSFAEPGG--GGGGGGGGPGGSASGPGGTGGGKASVGAMG 57
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 32.3 bits (72), Expect = 0.27
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPA-GSGGEKVSSSGSG 197
GGGG G+ S G+ G GG G GR S+ S G + GSGG S G G
Sbjct: 521 GGGGYGSGGSSYGSGGGSYGSGGG-GGGGRGSYGSGGSSYGSGGGSYGSGGGG 572
>gi|52218860 olfactory receptor, family 11, subfamily H, member 6
[Homo sapiens]
Length = 330
Score = 32.3 bits (72), Expect = 0.27
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 121 DTVIIVGSLLRALGSHNFFV--AVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSH 178
+++II G L LGS+ + + +P G G FS G+ L +V+L G S
Sbjct: 221 NSMIIFGPFLSILGSYTLVIRAVLCIPSGAGRTKAFSTCGSHLMVVSLFYGTLMVMYVSP 280
Query: 179 SSPGPAG 185
+S PAG
Sbjct: 281 TSGNPAG 287
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 31.6 bits (70), Expect = 0.47
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 142 VSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
+ L G GGSG + G+ G GG GS G S GSGG SGSG
Sbjct: 473 IGLGGRGGSGGSYGR-GSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSG 527
Score = 30.8 bits (68), Expect = 0.79
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 143 SLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
S GGGG G FS + G + + G G G +S G +G GG SS G G
Sbjct: 36 SSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSG-GGFSASSLGGG 89
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 12/52 (23%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
GGGGSG + GG GS G S G +GSGG G G
Sbjct: 498 GGGGSGGGYG------------GGSGSRGGSGGSYGGGSGSGGGSGGGYGGG 537
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 12/51 (23%)
Query: 147 GGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
GGGSG + GG GS G S G +G GGE S G G
Sbjct: 565 GGGSGGGYG------------GGSGSRGGSGGSHGGGSGFGGESGGSYGGG 603
Score = 27.7 bits (60), Expect = 6.7
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 147 GGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGS---GGEKVSSSGSG 197
GGGSG+ G + G GG G G +G GGE+ S SG G
Sbjct: 559 GGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGG 612
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 31.6 bits (70), Expect = 0.47
Identities = 25/68 (36%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Query: 141 AVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS-----------PGPAGSGGE 189
AV PGGGG GA + G L +RS SS PGP G G
Sbjct: 1350 AVGTPGGGGGGAVPGISAMSRG--DLSQRAKDLSKRSFSSQRPGMERQNRRPGPGGKAGS 1407
Query: 190 KVSSSGSG 197
SSSG G
Sbjct: 1408 SGSSSGGG 1415
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 30.8 bits (68), Expect = 0.79
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 138 FFVAVSLPGGGGSGADFSLLGAFLG--LVALLGGLGSCGRRSHSSPGPAGSGG 188
F V L GGGG G LG LG L L+ G G G G G GG
Sbjct: 2 FLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGG 54
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 30.8 bits (68), Expect = 0.79
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 138 FFVAVSLPGGGGSGADFSLLGAFLG--LVALLGGLGSCGRRSHSSPGPAGSGG 188
F V L GGGG G LG LG L L+ G G G G G GG
Sbjct: 2 FLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGG 54
>gi|124107614 PR domain containing 13 [Homo sapiens]
Length = 707
Score = 30.8 bits (68), Expect = 0.79
Identities = 32/109 (29%), Positives = 39/109 (35%), Gaps = 21/109 (19%)
Query: 101 GHWGSPRA-------SLTLSDIFTGHTDTVIIVGSLLRALGSHNFFVAVSL---PGGGGS 150
G WG P+ +L +S G + IVG +GS F+ V P G
Sbjct: 243 GKWGQPKKGKEQLDRALDMSGAARGQGHFLGIVGGSSAGVGSLAFYPGVRSAFKPAGLAR 302
Query: 151 GA-----------DFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGG 188
A S GA L L LLGG +CGR AG G
Sbjct: 303 AAAAAHGDPYREESSSKQGAGLALGRLLGGGRACGRPGSGENSAAGGAG 351
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 30.4 bits (67), Expect = 1.0
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 11/95 (11%)
Query: 6 STALLTPRFSLVCSPWGT-GAVCRSPQTH-------IANDTVLSGV---DTRYPNYLKPG 54
S AL+TP +LV T G V P +A+D ++ DT PN +
Sbjct: 3682 SVALVTPTDNLVVPDLTTDGPVVPDPSADGPVVLVSLADDLLVPNPPVKDTVVPNSVADN 3741
Query: 55 RRSEDSLAGCSLLDAPSTVRLLCSPGKDNGPLLSD 89
+ D + C L+ PS L+ + D GP++ D
Sbjct: 3742 PVALDPVTDCPLVPEPSANGLVVTDSLDEGPVVPD 3776
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 30.4 bits (67), Expect = 1.0
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 7 TALLTPRFSLVCSPWGTGAVCRSPQTHIANDTVLSGVDTRYPNYLKPGRRS--------- 57
T+LL P + P+G+ + + +A ++++ G++ P L S
Sbjct: 800 TSLLLPDLLPMTDPFGSTSDAVIEKADVAVESLIPGLEPPVPQRLPSQTESVTSNRTDSL 859
Query: 58 --EDSLAGCSLLDAPST 72
EDSL CSLL P+T
Sbjct: 860 TGEDSLLDCSLLSNPTT 876
>gi|119395754 keratin 5 [Homo sapiens]
Length = 590
Score = 30.0 bits (66), Expect = 1.4
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 135 SHNFFVAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSS 194
S F +VS GGGG G G V+L G G G S S GS +S+S
Sbjct: 28 SRTSFTSVSRSGGGGGGG--------FGRVSLAGACGVGGYGSRSLYNLGGSKRISISTS 79
Query: 195 G 195
G
Sbjct: 80 G 80
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 30.0 bits (66), Expect = 1.4
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 142 VSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
V GGGG G G+ G GG GS G S S G +G GG G G
Sbjct: 17 VKTSGGGGGGG-----GSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGG 67
Score = 29.6 bits (65), Expect = 1.8
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSGR 198
GGG SG G G + + GG CG S G GG V SGSG+
Sbjct: 246 GGGSSGCGGGSSGIGSGCI-ISGGGSVCGGGSSGG----GGGGSSVGGSGSGK 293
Score = 28.5 bits (62), Expect = 3.9
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
GGGG G G G V GG GS G S +G GG SSG G
Sbjct: 70 GGGGGGGIGGCGGGSGGSVKYSGGGGSSG--GGSGCFSSGGGGSGCFSSGGG 119
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein
[Homo sapiens]
Length = 1650
Score = 30.0 bits (66), Expect = 1.4
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 145 PGGGGSGADFSLLG--AFLGLVALLGGLGSCGRRSHSSP-GPAGSGGEKVSSSGSG 197
PG G L G GL GG G G S P GPAGS GE+ ++GSG
Sbjct: 886 PGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGER-GAAGSG 940
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein
[Homo sapiens]
Length = 1629
Score = 30.0 bits (66), Expect = 1.4
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 145 PGGGGSGADFSLLG--AFLGLVALLGGLGSCGRRSHSSP-GPAGSGGEKVSSSGSG 197
PG G L G GL GG G G S P GPAGS GE+ ++GSG
Sbjct: 865 PGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGER-GAAGSG 919
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 30.0 bits (66), Expect = 1.4
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 145 PGGGGSGADFSLLG--AFLGLVALLGGLGSCGRRSHSSP-GPAGSGGEKVSSSGSG 197
PG G L G GL GG G G S P GPAGS GE+ ++GSG
Sbjct: 972 PGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGER-GAAGSG 1026
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 29.6 bits (65), Expect = 1.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGS 196
GGGGS + +L A G GG+ + G + S+P A +G SSS S
Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
Score = 27.3 bits (59), Expect = 8.8
Identities = 17/58 (29%), Positives = 21/58 (36%)
Query: 140 VAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
+A + G GG G S G + GS S SS + S SSS G
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 29.6 bits (65), Expect = 1.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGS 196
GGGGS + +L A G GG+ + G + S+P A +G SSS S
Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
Score = 27.3 bits (59), Expect = 8.8
Identities = 17/58 (29%), Positives = 21/58 (36%)
Query: 140 VAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
+A + G GG G S G + GS S SS + S SSS G
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 29.6 bits (65), Expect = 1.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 146 GGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGS 196
GGGGS + +L A G GG+ + G + S+P A +G SSS S
Sbjct: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
Score = 27.3 bits (59), Expect = 8.8
Identities = 17/58 (29%), Positives = 21/58 (36%)
Query: 140 VAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
+A + G GG G S G + GS S SS + S SSS G
Sbjct: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 29.6 bits (65), Expect = 1.8
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 142 VSLPGGGGSG---ADFSLLGAFLGLVALLGGLGSCGRR-SHSSPGPAGSGGEKVSSSGSG 197
++LPGGGG G A+ LG LG ++ L GLG G +P P + + S G G
Sbjct: 148 LALPGGGGDGAAVAEIGALGRRLG-ISRLQGLGEGGDAWVPPTPAPMATSQPEEDSFGPG 206
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 29.6 bits (65), Expect = 1.8
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 142 VSLPGGGGSG---ADFSLLGAFLGLVALLGGLGSCGRR-SHSSPGPAGSGGEKVSSSGSG 197
++LPGGGG G A+ LG LG ++ L GLG G +P P + + S G G
Sbjct: 148 LALPGGGGDGAAVAEIGALGRRLG-ISRLQGLGEGGDAWVPPTPAPMATSQPEEDSFGPG 206
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 29.6 bits (65), Expect = 1.8
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 146 GGGGSGADFSLLGAFLGLV--ALLGGLG-SCGRRSHSSPGPA----GSGGEKVSSSGSGR 198
GGGG G GA G V A GG G G + + P PA GSGG SGS R
Sbjct: 32 GGGGRGDAGPGSGAASGTVVAAAAGGPGPGAGGVAAAGPAPAPPTGGSGGSGAGGSGSAR 91
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 29.3 bits (64), Expect = 2.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query: 145 PGGGGSGADFSLLGAFLGLVALLGG--LGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
PGGGG+GA GL A + G L ++ +S GP E S G G
Sbjct: 216 PGGGGAGAP--------GLAAAIAGAKLRKVSKQEEASGGPTAPKAESGRSGGGG 262
>gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens]
Length = 407
Score = 29.3 bits (64), Expect = 2.3
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
Query: 143 SLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS----PGPAGSGG 188
+L G SG + S LG GL +LLG + SHS GPAG GG
Sbjct: 136 ALGASGSSGHELSALGGEGGLQSLLGNM------SHSQLMQLIGPAGLGG 179
>gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens]
Length = 407
Score = 29.3 bits (64), Expect = 2.3
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
Query: 143 SLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSS----PGPAGSGG 188
+L G SG + S LG GL +LLG + SHS GPAG GG
Sbjct: 136 ALGASGSSGHELSALGGEGGLQSLLGNM------SHSQLMQLIGPAGLGG 179
>gi|167466169 growth arrest-specific 1 [Homo sapiens]
Length = 345
Score = 29.3 bits (64), Expect = 2.3
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 140 VAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPG 182
+ +L GGGG ++ GA+L L+ALL LGS R S + G
Sbjct: 1 MVAALLGGGGEARGGTVPGAWLCLMALLQLLGSAPRGSGLAHG 43
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 29.3 bits (64), Expect = 2.3
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 140 VAVSLPGGGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGG 188
+++S+ GGGG F G F G GG S G S S G G GG
Sbjct: 72 ISISVAGGGGG---FGAAGGFGGRGGGFGGGSSFGGGSGFSGGGFGGGG 117
Score = 29.3 bits (64), Expect = 2.3
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 147 GGGSGADFSLLGAFLGLVALLGGLGSCGRRSHSSPGPAGSGGEKVSSSGSG 197
GGGSG + G G GG GS G + HSS G + G GSG
Sbjct: 566 GGGSGGRYGSGGGSKGGSISGGGYGSGGGK-HSSGGGSRGGSSSGGGYGSG 615
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,162,884
Number of Sequences: 37866
Number of extensions: 471631
Number of successful extensions: 1993
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 1868
Number of HSP's gapped (non-prelim): 159
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.