Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239743848
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743848 PREDICTED: hypothetical protein [Homo sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743851 PREDICTED: hypothetical protein [Homo sapiens] 417 e-117
gi|239743848 PREDICTED: hypothetical protein [Homo sapiens] 417 e-117
gi|239743746 PREDICTED: hypothetical protein [Homo sapiens] 417 e-117
gi|239758169 PREDICTED: hypothetical protein [Homo sapiens] 402 e-113
gi|239743837 PREDICTED: hypothetical protein [Homo sapiens] 393 e-110
gi|239743815 PREDICTED: hypothetical protein [Homo sapiens] 392 e-110
gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo ... 386 e-108
gi|239745046 PREDICTED: hypothetical protein [Homo sapiens] 84 5e-17
gi|160707881 formin 2 [Homo sapiens] 49 2e-06
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 46 2e-05
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 40 0.001
gi|194097341 period 1 [Homo sapiens] 40 0.001
gi|41350201 epsin 1 isoform c [Homo sapiens] 39 0.002
gi|194248095 epsin 1 isoform b [Homo sapiens] 39 0.002
gi|194272148 epsin 1 isoform a [Homo sapiens] 39 0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni... 38 0.005
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.007
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.007
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 37 0.007
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 37 0.009
gi|167900478 POU class 2 associating factor 1 [Homo sapiens] 36 0.016
gi|94536830 DMRT-like family C2 [Homo sapiens] 36 0.021
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 35 0.046
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 35 0.046
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 35 0.046
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 35 0.046
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 35 0.046
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.046
gi|7706501 WW domain binding protein 11 [Homo sapiens] 35 0.046
gi|169213703 PREDICTED: hypothetical protein [Homo sapiens] 34 0.060
>gi|239743851 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 417 bits (1073), Expect = e-117
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW 180
PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|239743848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 417 bits (1073), Expect = e-117
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW 180
PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|239743746 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 417 bits (1073), Expect = e-117
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW 180
PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|239758169 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 402 bits (1034), Expect = e-113
Identities = 173/181 (95%), Positives = 177/181 (97%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSL+LPCPS+PWPCPHPALALHWSCPALALPWP PCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLVLPCPSVPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGP+LSPPCSGPALALALLLVLPLLWPCSVFG ALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPVLSPPCSGPALALALLLVLPLLWPCSVFGHALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW 180
PWPYHGLLLPWPGPTLAFSTLALPFP +ALPWPCP LALALPYPGPGSALTLALVLSCPW
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPDLALPWPCPTLALALPYPGPGSALTLALVLSCPW 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|239743837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 393 bits (1010), Expect = e-110
Identities = 175/185 (94%), Positives = 178/185 (96%), Gaps = 4/185 (2%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWP PCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALAL--PYPGPGSA--LTLALVL 176
PWPYHGLLLPWPGPTLAFSTLALPFPG+ALPWPCPA+ALAL P PGPGS+ L LALVL
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLLLDLALVL 180
Query: 177 SCPWL 181
SCPWL
Sbjct: 181 SCPWL 185
>gi|239743815 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 392 bits (1007), Expect = e-110
Identities = 174/185 (94%), Positives = 178/185 (96%), Gaps = 4/185 (2%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWP PCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESM+WPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW
Sbjct: 61 PTESMRWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALAL--PYPGPGSA--LTLALVL 176
PWPYHGLLLPWPGPTLAFSTLALPFPG+ALPWPCPA+ALAL P PGPGS+ L LALVL
Sbjct: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSSLHLDLALVL 180
Query: 177 SCPWL 181
SCPWL
Sbjct: 181 SCPWL 185
>gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo
sapiens]
Length = 185
Score = 386 bits (991), Expect = e-108
Identities = 170/185 (91%), Positives = 174/185 (94%), Gaps = 4/185 (2%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
MTLPWPSPGPSL+LPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR
Sbjct: 1 MTLPWPSPGPSLVLPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW 120
PTESMKWPWTCLAILCP P+LSPPCSGP LALALLLVLPLLWPCSVFG ALCYPSPALPW
Sbjct: 61 PTESMKWPWTCLAILCPCPVLSPPCSGPVLALALLLVLPLLWPCSVFGHALCYPSPALPW 120
Query: 121 PWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALAL--PYPGPGSA--LTLALVL 176
PWPYHGLLLPWPG TLAFSTLALP PG+ALPWPCPA+ALAL P PGPGSA L LALVL
Sbjct: 121 PWPYHGLLLPWPGHTLAFSTLALPCPGLALPWPCPAMALALPCPCPGPGSALLLALALVL 180
Query: 177 SCPWL 181
SCPWL
Sbjct: 181 SCPWL 185
>gi|239745046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 84.3 bits (207), Expect = 5e-17
Identities = 60/174 (34%), Positives = 79/174 (45%), Gaps = 45/174 (25%)
Query: 1 MTLPWPSPGPSLILPCPSMPW--PCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPD 58
+ PW PGP+L ++PW PCPH LAL AL LP+PWPC P+P
Sbjct: 38 LAAPWTCPGPAL-----TLPWLLPCPHYGLAL---ALALVLPYPWPC---------PYPG 80
Query: 59 PRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPAL 118
P P ++ W +LS C A+ALALL ++P P P P L
Sbjct: 81 PAPAAALALAWNL--------VLSRTCPDSAMALALLCLVPGPDP---------DPDPFL 123
Query: 119 PWPWPYHG----LLLPWPGPTLAFSTLALPFPGVALPWPCPAL--ALALPYPGP 166
WP+ G ++ PW + + L + LPWP A ALALP+P P
Sbjct: 124 ALHWPFPGPELAVVCPW---SCHYPALLCSGCVITLPWPYSAFDPALALPWPSP 174
Score = 79.0 bits (193), Expect = 2e-15
Identities = 63/172 (36%), Positives = 72/172 (41%), Gaps = 51/172 (29%)
Query: 22 PCPHPALALHWSCPALALPWP-----WPCLLPGLAFALPWPDPRPTESMKWPWTCLAILC 76
P P LAL W A+ALP+P WPCL+ A PW P P ++ W
Sbjct: 7 PSPGTDLALSWPSGAIALPYPELVVLWPCLV----LAAPWTCPGPALTLPWLL------- 55
Query: 77 PGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLPW----- 131
PC LALAL LVLP WPC YP PA P L L W
Sbjct: 56 -------PCPHYGLALALALVLPYPWPCP-------YPGPA-----PAAALALAWNLVLS 96
Query: 132 ---PGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCPW 180
P +A + L L PG P P P LAL P+PGP L + CPW
Sbjct: 97 RTCPDSAMALALLCL-VPGPD-PDPDPFLALHWPFPGP------ELAVVCPW 140
Score = 49.7 bits (117), Expect = 1e-06
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 128 LLPWPGPTLAFS----TLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCP 179
+LP PG LA S +ALP+P + + WPC L LA P+ PG ALTL +L CP
Sbjct: 5 VLPSPGTDLALSWPSGAIALPYPELVVLWPC--LVLAAPWTCPGPALTLPWLLPCP 58
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 48.9 bits (115), Expect = 2e-06
Identities = 50/160 (31%), Positives = 65/160 (40%), Gaps = 34/160 (21%)
Query: 18 SMPWPCPHPALALHWSCPALALPWPWPCLLPGLAF------ALPWPDP-RPTESMKWPWT 70
++P P P P S P L + P P LPG+ A+P P P + TE + P
Sbjct: 854 NIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPP 913
Query: 71 CLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLLP 130
L PG + PP P L A +L LP L P +P P P G +P
Sbjct: 914 PL----PGAGIPPP---PPLPGAGILPLPPL------------PGAGIPPPPPLPGAAIP 954
Query: 131 WPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSAL 170
P P LP G+ LP P P + P P PG+ +
Sbjct: 955 PPPP--------LPGAGIPLPPPLPGAGIPPPPPLPGAGI 986
Score = 42.4 bits (98), Expect = 2e-04
Identities = 49/175 (28%), Positives = 64/175 (36%), Gaps = 31/175 (17%)
Query: 4 PWPSPGPSLI----LPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDP 59
P P PG ++ LP +P P P P A+ P P P LPG +P P P
Sbjct: 923 PPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGA--GIPPPPP 980
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP--- 116
P + P PG + PP P + LP G + P P
Sbjct: 981 LPGAGIPPPPP-----LPGAGIPPPPPLPGAGIPPPPPLP--------GAGIPPPPPLPG 1027
Query: 117 -ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSAL 170
+P P P G +P P P LP G+ P P P + P P PG+ +
Sbjct: 1028 AGIPPPPPLPGAGIPPPPP--------LPGAGIPPPPPLPGAGIPPPPPLPGAGI 1074
Score = 42.0 bits (97), Expect = 3e-04
Identities = 50/178 (28%), Positives = 67/178 (37%), Gaps = 26/178 (14%)
Query: 4 PWPSPGPSLILPCP----SMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDP 59
P P PG + LP P +P P P P + P P P LPG +P P P
Sbjct: 956 PPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG--IPPPPP 1013
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLP---LLWPCSVFGRALCYPSP 116
P + P PG + PP P + LP + P + G + P P
Sbjct: 1014 LPGAGIPPPPPL-----PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP 1068
Query: 117 ----ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSAL 170
+P P P G +P P P LP G+ P P P + + P P PG+ +
Sbjct: 1069 LPGAGIPPPPPLPGAGIPPPPP--------LPGAGIPPPPPLPGVGIPPPPPLPGAGI 1118
Score = 40.4 bits (93), Expect = 8e-04
Identities = 48/178 (26%), Positives = 63/178 (35%), Gaps = 33/178 (18%)
Query: 3 LPWPSPGPSLILPCP------SMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPW 56
+P P P P +P P +P P P P + P P P LPG +P
Sbjct: 942 IPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGA--GIPP 999
Query: 57 PDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP 116
P P P + P PG + PP P + LP G + P P
Sbjct: 1000 PPPLPGAGIPPPPP-----LPGAGIPPPPPLPGAGIPPPPPLP--------GAGIPPPPP 1046
Query: 117 ----ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSAL 170
+P P P G +P P P LP G+ P P P + P P PG+ +
Sbjct: 1047 LPGAGIPPPPPLPGAGIPPPPP--------LPGAGIPPPPPLPGAGIPPPPPLPGAGI 1096
Score = 39.7 bits (91), Expect = 0.001
Identities = 49/174 (28%), Positives = 64/174 (36%), Gaps = 28/174 (16%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + P P P LPG+ +P P P
Sbjct: 1055 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVG--IPPPPP 1112
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLW---PCSVFGRALCYPSP 116
P + P PG + PP P + LP + P + G + P P
Sbjct: 1113 LPGAGIPPPPPL-----PGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPP 1167
Query: 117 ----ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGP 166
+P P P G+ +P P P PGV +P P P +P P P
Sbjct: 1168 LPGAGIPPPPPLPGVGIPPPPP----------LPGVGIPPPPPLPGAGIPPPPP 1211
Score = 39.7 bits (91), Expect = 0.001
Identities = 49/175 (28%), Positives = 64/175 (36%), Gaps = 31/175 (17%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + P + P P LPG +P P P
Sbjct: 1066 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGA--GIPPPPP 1123
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP--- 116
P + P PG + PP P + + LP G + P P
Sbjct: 1124 LPGAGIPPPPP-----LPGAGIPPPPPLPRVGIPPPPPLP--------GAGIPPPPPLPG 1170
Query: 117 -ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSAL 170
+P P P G+ +P P P LP G+ P P P + P P PG +
Sbjct: 1171 AGIPPPPPLPGVGIPPPPP--------LPGVGIPPPPPLPGAGIPPPPPLPGMGI 1217
Score = 38.9 bits (89), Expect = 0.002
Identities = 50/172 (29%), Positives = 62/172 (36%), Gaps = 24/172 (13%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + P P P LPG +P P P
Sbjct: 1044 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA--GIPPPPP 1101
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP--- 116
P + P PG + PP P + LP G + P P
Sbjct: 1102 LPGVGIPPPPP-----LPGAGIPPPPPLPGAGIPPPPPLP--------GAGIPPPPPLPR 1148
Query: 117 -ALPWPWPYHGLLLPWPGPTL-AFSTLALPFPGVALPWPCPALALALPYPGP 166
+P P P G +P P P A P PGV +P P P + +P P P
Sbjct: 1149 VGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPP 1200
Score = 38.9 bits (89), Expect = 0.002
Identities = 49/179 (27%), Positives = 66/179 (36%), Gaps = 35/179 (19%)
Query: 4 PWPSPG----PSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDP 59
P P PG P LP +P P P P + + P P P LPG +P P P
Sbjct: 1077 PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGA--GIPPPPP 1134
Query: 60 RPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP--- 116
P + P + P P PP G + P + G + P P
Sbjct: 1135 LPGAGIPPPPPLPRVGIPPP---PPLPGAGIPP----------PPPLPGAGIPPPPPLPG 1181
Query: 117 -ALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALAL----ALPYPGPGSAL 170
+P P P G+ +P P P LP G+ P P P + + A P P PG+ +
Sbjct: 1182 VGIPPPPPLPGVGIPPPPP--------LPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGI 1232
Score = 34.7 bits (78), Expect = 0.046
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 9/120 (7%)
Query: 54 LPWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCY 113
+P P P P L ++ P P PP G + +P P + G +
Sbjct: 855 IPSPPPLPCTESSSSMPGLGMVPPPP---PPLPGMTVPTLPSTAIPQ--PPPLQGTEMLP 909
Query: 114 PSPALPWPWPYHGLLLPWPGPTLAFSTLA-LPFPGVALPWPCPALALALPYPGPGSALTL 172
P P P P G+ P P P L LP G+ P P P A+ P P PG+ + L
Sbjct: 910 PPPP---PLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPL 966
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 45.8 bits (107), Expect = 2e-05
Identities = 55/171 (32%), Positives = 67/171 (39%), Gaps = 42/171 (24%)
Query: 8 PGPSLILPCPSMPWPCPHPALAL---HWSCPALALPWPWPCLLPGLAFALPWPDPRPTES 64
P +L P PS P P P A L + ALA P P P A P P P
Sbjct: 1551 PASALASPFPSAPNPAPAQASLLAPASSASQALATPLA-PMAAPQTAILAPSPAPP---- 1605
Query: 65 MKWPWTCLAILCPGPILSP-PCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
L P P+L+P P + P LA + V P++ P S G +L SP
Sbjct: 1606 ----------LAPLPVLAPSPGAAPVLASSQTPV-PVMAPSSTPGTSLASASP------- 1647
Query: 124 YHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLAL 174
+P P P LA S+ LP P P+ P P P S TLAL
Sbjct: 1648 -----VPAPTPVLAPSSTQ-----TMLPAPVPS-----PLPSPASTQTLAL 1683
Score = 42.7 bits (99), Expect = 2e-04
Identities = 55/178 (30%), Positives = 68/178 (38%), Gaps = 16/178 (8%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
PSP P P +P P P A + +P P PG + A P P PT +
Sbjct: 1600 PSPAP----PLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVL 1655
Query: 66 KWPWTCLAILCPGPILSP---PCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPW 122
T + P P+ SP P S LALA L L +L +P P+P
Sbjct: 1656 APSST--QTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPT 1713
Query: 123 PYHGL-----LLPWPGPTLAFSTLALPFPGVALPW-PCPALALALPY-PGPGSALTLA 173
L L+P P TL+ + P L P P LA A P P P LTLA
Sbjct: 1714 QTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLA 1771
Score = 37.7 bits (86), Expect = 0.005
Identities = 37/117 (31%), Positives = 47/117 (40%), Gaps = 18/117 (15%)
Query: 71 CLAILCPGPILSPP---CSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGL 127
C +L P L+ P PA A A LL P S +AL +P P P +
Sbjct: 1545 CSPVLVPASALASPFPSAPNPAPAQASLLA-----PASSASQALA--TPLAPMAAPQTAI 1597
Query: 128 LLPWPGPTLAFSTLALPFPGVA-----LPWPCPALALALPYPGPGSALTLALVLSCP 179
L P P P LA + P PG A P P +A P PG++L A + P
Sbjct: 1598 LAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMA---PSSTPGTSLASASPVPAP 1651
Score = 36.6 bits (83), Expect = 0.012
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 77 PG-PILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH-GLLLPWPGP 134
PG P+L P S L V P P V AL P P+ P P P LL P
Sbjct: 1521 PGHPLLLAPTSSHVPGLNST-VAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSA 1579
Query: 135 TLAFST----LALPFPGVALPWPCPALA-LALPYPGPGSALTLA 173
+ A +T +A P + P P P LA L + P PG+A LA
Sbjct: 1580 SQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLA 1623
Score = 28.5 bits (62), Expect = 3.3
Identities = 37/134 (27%), Positives = 46/134 (34%), Gaps = 23/134 (17%)
Query: 22 PCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKWPWTCLAILCPGPIL 81
P P P L+ A P P P +LP P P P PGP+L
Sbjct: 1026 PPPGPELS------AQPTPGPVPQVLPASLMVSASPAGPPLIPASRP--------PGPVL 1071
Query: 82 SPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW----PWPYHGLLLPWPGPTLA 137
PP + +L +L PL V P+P L P P P PG +
Sbjct: 1072 LPPLQPNSGSLPQVLPSPL----GVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSL 1127
Query: 138 FSTLALPFPGVALP 151
L +P PG P
Sbjct: 1128 LKPLTVP-PGYTFP 1140
Score = 27.7 bits (60), Expect = 5.6
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 16/112 (14%)
Query: 3 LPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPT 62
+P +P P ILP +P P P P+ S PA C P P P P
Sbjct: 2466 VPISAPNPITILPVHILPSP-PPPSQIPPCSSPA--------CTPPPACTPPPAHTPPPA 2516
Query: 63 ESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYP 114
+ TCL + P+L P S P A L L L + +AL P
Sbjct: 2517 Q------TCL-VTPSSPLLLGPPSVPISASVTNLPLGLRPEAELCAQALASP 2561
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 40.0 bits (92), Expect = 0.001
Identities = 48/156 (30%), Positives = 63/156 (40%), Gaps = 35/156 (22%)
Query: 6 PSPGPSLILPCPSMPWP-CPHPALALHWSCPALALP-WPWPCLLPGLAFALPWP----DP 59
P PGP+ P P+MP+P P P A + PA A P PW + G PW
Sbjct: 108 PGPGPTGPYPTPNMPFPELPRPYGAP--TDPAAAGPLGPWGSMSSG-----PWAPGMGGQ 160
Query: 60 RPTESMKWPWTCLAILCPGPI-LSPPCSGPALALALLLVLPLLW---PCSVFGRALCYPS 115
PT +M +P PGP PP P A P+ W P +G YP+
Sbjct: 161 YPTPNMPYP-------SPGPYPAPPPPQAPGAA------PPVPWGTVPPGAWGPPAPYPA 207
Query: 116 PALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALP 151
P +P P GL +P P+ F + P +P
Sbjct: 208 PTGSYPTP--GL---YPTPSNPFQVPSGPSGAPPMP 238
Score = 38.5 bits (88), Expect = 0.003
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 16/88 (18%)
Query: 3 LPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPT 62
+P+PSPG P+P P P A P A P PW + PG A+ P P P PT
Sbjct: 166 MPYPSPG----------PYPAPPPPQA-----PGAAPPVPWGTVPPG-AWGPPAPYPAPT 209
Query: 63 ESMKWPWTCLAILCPGPILSPPCSGPAL 90
S P P + S P P +
Sbjct: 210 GSYPTPGLYPTPSNPFQVPSGPSGAPPM 237
Score = 35.8 bits (81), Expect = 0.021
Identities = 36/135 (26%), Positives = 48/135 (35%), Gaps = 25/135 (18%)
Query: 56 WPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPS 115
WP P + P + + L P S GPA V P P P
Sbjct: 34 WPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPP----------PG 83
Query: 116 PALPWP----------WPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPG 165
P P+P PY +P PGPT + T +PFP + P+ P A G
Sbjct: 84 PPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAGPLG 143
Query: 166 PGSALTLALVLSCPW 180
P +++ S PW
Sbjct: 144 PWGSMS-----SGPW 153
>gi|194097341 period 1 [Homo sapiens]
Length = 1290
Score = 39.7 bits (91), Expect = 0.001
Identities = 50/161 (31%), Positives = 59/161 (36%), Gaps = 55/161 (34%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
PSP P PS PWP P PA PA+ P+P P P P P P
Sbjct: 859 PSPVP------PSTPWPTP-PATT---PFPAVVQPYPLPVFSP-----RGGPQPLP---- 899
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWP--WP 123
P P PP + PA LV P++ AL P+ P P +P
Sbjct: 900 -----------PAPTSVPPAAFPA-----PLVTPMV--------ALVLPNYLFPTPSSYP 935
Query: 124 YHGLLLPWPGPTLAFSTLALPFPGVALPWP-CPALALALPY 163
Y L P GP P P P P PALA + P+
Sbjct: 936 YGALQTPAEGP---------PTPASHSPSPSLPALAPSPPH 967
Score = 32.0 bits (71), Expect = 0.30
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 18/101 (17%)
Query: 4 PWPSPGPSLILPCPSMPWPC--------PHPALALHWSCPALALPWPWPCLLPGLAFALP 55
PWP+P + P P+P P P S P A +P P + P +A LP
Sbjct: 867 PWPTPPATTPFPAVVQPYPLPVFSPRGGPQPLPPAPTSVPPAA--FPAPLVTPMVALVLP 924
Query: 56 -WPDPRPTESMKWPWTCLAILCPGPIL----SPPCSGPALA 91
+ P P+ +P+ L GP SP S PALA
Sbjct: 925 NYLFPTPS---SYPYGALQTPAEGPPTPASHSPSPSLPALA 962
Score = 28.1 bits (61), Expect = 4.3
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 13/57 (22%)
Query: 110 ALCYPSPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGP 166
A CY S P P PWP P PFP V P+P P + P GP
Sbjct: 852 APCYVSHPSPVPPS-----TPWPTPPAT-----TPFPAVVQPYPLPVFS---PRGGP 895
Score = 26.9 bits (58), Expect = 9.6
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Query: 58 DPRPTESMKWPWTCLA-ILCPGPILSPPCSGPALA 91
DPRP ES C + PGP PC GP+LA
Sbjct: 13 DPRPGESF-----CPGGVPSPGPPQHRPCPGPSLA 42
>gi|41350201 epsin 1 isoform c [Homo sapiens]
Length = 550
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
P+P P+ + PW P P A + + PW P + P A PW P PT +
Sbjct: 242 PAPAPT------TDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPA---ADPWGGPAPTPAS 292
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH 125
PW A GP + P PA A A P W S G + PS + PW P
Sbjct: 293 GDPWRPAA--PAGPSVDPWGGTPAPA-AGEGPTPDPWGSSDGGVPVSGPSASDPWT-PAP 348
Query: 126 GLLLPWPGPTLAFST 140
PW G ST
Sbjct: 349 AFSDPWGGSPAKPST 363
>gi|194248095 epsin 1 isoform b [Homo sapiens]
Length = 576
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
P+P P+ + PW P P A + + PW P + P A PW P PT +
Sbjct: 267 PAPAPT------TDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPA---ADPWGGPAPTPAS 317
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH 125
PW A GP + P PA A A P W S G + PS + PW P
Sbjct: 318 GDPWRPAA--PAGPSVDPWGGTPAPA-AGEGPTPDPWGSSDGGVPVSGPSASDPWT-PAP 373
Query: 126 GLLLPWPGPTLAFST 140
PW G ST
Sbjct: 374 AFSDPWGGSPAKPST 388
>gi|194272148 epsin 1 isoform a [Homo sapiens]
Length = 662
Score = 39.3 bits (90), Expect = 0.002
Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
P+P P+ + PW P P A + + PW P + P A PW P PT +
Sbjct: 353 PAPAPT------TDPWGGPAPMAAAVPTAAPTSDPWGGPPVPPA---ADPWGGPAPTPAS 403
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH 125
PW A GP + P PA A A P W S G + PS + PW P
Sbjct: 404 GDPWRPAA--PAGPSVDPWGGTPAPA-AGEGPTPDPWGSSDGGVPVSGPSASDPWT-PAP 459
Query: 126 GLLLPWPGPTLAFST 140
PW G ST
Sbjct: 460 AFSDPWGGSPAKPST 474
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 37.7 bits (86), Expect = 0.005
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 8 PGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKW 67
PGP+L PC P CP S A P+P P + +P+P ++
Sbjct: 41 PGPTLPPPCSPAPQQCP-------LSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPL 93
Query: 68 PWTCLAILCPGPILSPPCSGPALALALLLVLPLL 101
A ++ PP S ALALA ++ P L
Sbjct: 94 GTAPEAPTFLPNLIGPPISPAALALASPMIAPTL 127
Score = 28.5 bits (62), Expect = 3.3
Identities = 51/184 (27%), Positives = 60/184 (32%), Gaps = 41/184 (22%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR 60
+ LP+P GP+ P P PAL++ S P A P P +P A P P
Sbjct: 891 VNLPFPKEGPAT-------PAPKQAPALSMTSSSPKKARATPAPKGIP----ASPSPKGA 939
Query: 61 PTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPS----- 115
PT P P P P P A P P G A P
Sbjct: 940 PTPPAATP--------PSPKGGPATPSPKWAPTPPAATP---PSPKGGPATPSPKGAPTP 988
Query: 116 PALPWPWPYHGLLLPWP----------GPTLAFSTLALPFP-GVALPWPCPALALALPYP 164
PA P P G P P P+ S A PFP G + P PA P
Sbjct: 989 PAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP---PAATPPSPKG 1045
Query: 165 GPGS 168
P +
Sbjct: 1046 SPAA 1049
Score = 28.1 bits (61), Expect = 4.3
Identities = 51/177 (28%), Positives = 60/177 (33%), Gaps = 30/177 (16%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
PSP + + P + P P A H P P P GLA P P PT
Sbjct: 1097 PSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP-PSPKGGLA--TPPPKGAPTTPA 1153
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSP-------AL 118
P + G + +PP G P P S G L PSP A
Sbjct: 1154 ATPPSP-----KGGLATPPPKGAPTT-------PAATPPSPKG-GLATPSPKGAPTTPAA 1200
Query: 119 PWPWPYHGLLLPWP--GPTLAFSTLALPFPGVALPWP-----CPALALALPYPGPGS 168
P P GL P P PT +T P G+A P P PA P GP +
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPAT 1257
Score = 26.9 bits (58), Expect = 9.6
Identities = 53/185 (28%), Positives = 62/185 (33%), Gaps = 31/185 (16%)
Query: 2 TLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPR- 60
TLP P GP+ PS+ PA A P P +P A P P+
Sbjct: 1063 TLPSPKGGPAT----PSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATP---PSPKG 1115
Query: 61 --PTESMKWPWTCLAILCPGP---ILSPPCSGPALALALLLVLPLLWPCSVFGRALCYP- 114
T K T A P P + +PP G P P S G P
Sbjct: 1116 GLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT-------PAATPPSPKGGLATPPP 1168
Query: 115 -----SPALPWPWPYHGLLLPWP--GPTLAFSTLALPFPGVALPWP--CPALALALPYPG 165
+PA P P GL P P PT +T P G+A P P P A P P
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP-PS 1227
Query: 166 PGSAL 170
P L
Sbjct: 1228 PKGGL 1232
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 37.4 bits (85), Expect = 0.007
Identities = 56/174 (32%), Positives = 62/174 (35%), Gaps = 29/174 (16%)
Query: 7 SPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMK 66
SP SL + + P P P LA P L +P P P P L P P P S+
Sbjct: 545 SPSASLPMSPLATPPPQAPPVLA----APLLQVP-PSPPASPTLQAPRRPPTPGPDTSVS 599
Query: 67 WPWTCLAILCPGPILSPP------CSGPALA----LALLLVLPLL-WPCSVFGRALCYPS 115
P LA L PGP P SGP LA A L + G A P
Sbjct: 600 GPRLTLA-LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 658
Query: 116 PALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSA 169
P + P P LAF PG LPWP P GPGSA
Sbjct: 659 PDAELAACHPAAWSRGPAPPLAFRGA----PGAPLPWP--------PATGPGSA 700
Score = 34.7 bits (78), Expect = 0.046
Identities = 53/170 (31%), Positives = 67/170 (39%), Gaps = 29/170 (17%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
PSP S + + P P P LA P L L P P P LA P P S
Sbjct: 483 PSPPASPPMSPSATPPPQAPPPLA----APPLQLAKPPPQAPPALATPPLQALPSPPASF 538
Query: 66 --KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
+ P++ A L P+ +PP P + A LL +P P S +A P P
Sbjct: 539 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA-----PRRP---- 589
Query: 124 YHGLLLPWPGPTLAFS----TLALPFPGVALPWPCPALALALPYPGPGSA 169
P PGP + S TLAL PG P P P+ + + GP A
Sbjct: 590 ------PTPGPDTSVSGPRLTLALA-PG---PPPPPSRSPSSTLSGPDLA 629
Score = 33.1 bits (74), Expect = 0.13
Identities = 50/170 (29%), Positives = 57/170 (33%), Gaps = 22/170 (12%)
Query: 14 LPCPSM-PWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKWPWTCL 72
LP P + P P P PALALP P P A P P T S + P
Sbjct: 381 LPSPPLSPLATPPPQAP-----PALALP---PLQAPPSPPASPPLSPLATPSPQAPNALA 432
Query: 73 AILCPGPIL---SPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLL 129
L P SPP P A V P P S +L P +P
Sbjct: 433 VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP---------- 482
Query: 130 PWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCP 179
P P + S A P P P P L LA P P AL + + P
Sbjct: 483 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP 532
Score = 31.2 bits (69), Expect = 0.51
Identities = 54/176 (30%), Positives = 59/176 (33%), Gaps = 21/176 (11%)
Query: 3 LPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRP- 61
L PSP +L P PH + L L P P P L LP P P
Sbjct: 304 LATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQ-TLPSPPATPP 362
Query: 62 ---TESMKWPWT-CLAILCPGPILSP----PCSG-PALALALLLVLPLLWPCSVFGRALC 112
T S+ P P P LSP P PALAL L P P S L
Sbjct: 363 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSP-PASPPLSPLA 421
Query: 113 YPSPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGS 168
PSP P H L P+ P P P V P+ PA P P S
Sbjct: 422 TPSPQAPNALAVHLLQAPFSPP---------PSPPVQAPFSPPASPPVSPSATPPS 468
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 37.4 bits (85), Expect = 0.007
Identities = 56/174 (32%), Positives = 62/174 (35%), Gaps = 29/174 (16%)
Query: 7 SPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMK 66
SP SL + + P P P LA P L +P P P P L P P P S+
Sbjct: 814 SPSASLPMSPLATPPPQAPPVLA----APLLQVP-PSPPASPTLQAPRRPPTPGPDTSVS 868
Query: 67 WPWTCLAILCPGPILSPP------CSGPALA----LALLLVLPLL-WPCSVFGRALCYPS 115
P LA L PGP P SGP LA A L + G A P
Sbjct: 869 GPRLTLA-LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 927
Query: 116 PALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSA 169
P + P P LAF PG LPWP P GPGSA
Sbjct: 928 PDAELAACHPAAWSRGPAPPLAFRGA----PGAPLPWP--------PATGPGSA 969
Score = 35.4 bits (80), Expect = 0.027
Identities = 53/168 (31%), Positives = 67/168 (39%), Gaps = 43/168 (25%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
PSP SL + + P P PALA + P ALP P P PG A
Sbjct: 770 PSPPASLPMSPLAKPPPQAPPALA---TPPLQALPSP-PASFPGQA-------------- 811
Query: 66 KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYH 125
P++ A L P+ +PP P + A LL +P P S +A P P
Sbjct: 812 --PFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA-----PRRP------ 858
Query: 126 GLLLPWPGPTLAFS----TLALPFPGVALPWPCPALALALPYPGPGSA 169
P PGP + S TLAL PG P P P+ + + GP A
Sbjct: 859 ----PTPGPDTSVSGPRLTLALA-PG---PPPPPSRSPSSTLSGPDLA 898
Score = 32.3 bits (72), Expect = 0.23
Identities = 52/183 (28%), Positives = 69/183 (37%), Gaps = 20/183 (10%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRP-- 61
P+ P + P + P P P+LA P L +P P P A P P P
Sbjct: 676 PFSPPASPPVSPSATPPSQAP-PSLA----APPLQVPPSPPASPPMSPSATPPPQAPPPL 730
Query: 62 -TESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYP----SP 116
++ P + A P +PP P L A L +P P S+ L P P
Sbjct: 731 AAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPP 790
Query: 117 ALPWPWPYHGLLLP---WPGPTLAFSTLALPFPGVALPWPCPALALALPY----PGPGSA 169
AL P P L P +PG + +LP +A P P LA P P P ++
Sbjct: 791 ALATP-PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 849
Query: 170 LTL 172
TL
Sbjct: 850 PTL 852
Score = 28.1 bits (61), Expect = 4.3
Identities = 50/181 (27%), Positives = 57/181 (31%), Gaps = 25/181 (13%)
Query: 1 MTLPWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAF-------- 52
+T P P S+ P P P P L S P L P P P LA
Sbjct: 576 LTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPS 635
Query: 53 --ALPWPDPRPTESMKWPWTCLAILCPGPIL---SPPCSGPALALALLLVLPLLWPCSVF 107
A P P T S + P L P SPP P A V P P S
Sbjct: 636 PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQA 695
Query: 108 GRALCYPSPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPG 167
+L P +P P P + S A P P P P A L +P P
Sbjct: 696 PPSLAAPPLQVP----------PSPPASPPMSPSATPPP--QAPPPLAAPPLQVPPSPPA 743
Query: 168 S 168
S
Sbjct: 744 S 744
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 37.4 bits (85), Expect = 0.007
Identities = 56/174 (32%), Positives = 62/174 (35%), Gaps = 29/174 (16%)
Query: 7 SPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMK 66
SP SL + + P P P LA P L +P P P P L P P P S+
Sbjct: 506 SPSASLPMSPLATPPPQAPPVLA----APLLQVP-PSPPASPTLQAPRRPPTPGPDTSVS 560
Query: 67 WPWTCLAILCPGPILSPP------CSGPALA----LALLLVLPLL-WPCSVFGRALCYPS 115
P LA L PGP P SGP LA A L + G A P
Sbjct: 561 GPRLTLA-LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 619
Query: 116 PALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSA 169
P + P P LAF PG LPWP P GPGSA
Sbjct: 620 PDAELAACHPAAWSRGPAPPLAFRGA----PGAPLPWP--------PATGPGSA 661
Score = 34.7 bits (78), Expect = 0.046
Identities = 53/170 (31%), Positives = 67/170 (39%), Gaps = 29/170 (17%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
PSP S + + P P P LA P L L P P P LA P P S
Sbjct: 444 PSPPASPPMSPSATPPPQAPPPLA----APPLQLAKPPPQAPPALATPPLQALPSPPASF 499
Query: 66 --KWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
+ P++ A L P+ +PP P + A LL +P P S +A P P
Sbjct: 500 PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQA-----PRRP---- 550
Query: 124 YHGLLLPWPGPTLAFS----TLALPFPGVALPWPCPALALALPYPGPGSA 169
P PGP + S TLAL PG P P P+ + + GP A
Sbjct: 551 ------PTPGPDTSVSGPRLTLALA-PG---PPPPPSRSPSSTLSGPDLA 590
Score = 33.1 bits (74), Expect = 0.13
Identities = 50/170 (29%), Positives = 57/170 (33%), Gaps = 22/170 (12%)
Query: 14 LPCPSM-PWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKWPWTCL 72
LP P + P P P PALALP P P A P P T S + P
Sbjct: 342 LPSPPLSPLATPPPQAP-----PALALP---PLQAPPSPPASPPLSPLATPSPQAPNALA 393
Query: 73 AILCPGPIL---SPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLL 129
L P SPP P A V P P S +L P +P
Sbjct: 394 VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVP---------- 443
Query: 130 PWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLSCP 179
P P + S A P P P P L LA P P AL + + P
Sbjct: 444 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP 493
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 37.0 bits (84), Expect = 0.009
Identities = 49/178 (27%), Positives = 64/178 (35%), Gaps = 44/178 (24%)
Query: 2 TLPWPSPGPSLILPC----PSMPWPCPH--------PALALHWSCPALALPWPWPCLLPG 49
T P P+P P+ PC P P P P+ P A H + +P P + P
Sbjct: 895 TAPRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQ 954
Query: 50 LAFALPWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGR 109
P P P+P S + P P P LPL P +
Sbjct: 955 -----PQPHPQPHPSQAFG--------PQPPQQP--------------LPLQHPHLFPPQ 987
Query: 110 ALCYPSPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPG 167
A P P+P+ +L P P L +PG A P PA + ALP+P PG
Sbjct: 988 APGLLPPQSPYPYAPQPGVLGQPPPPLHTQL----YPGPAQD-PLPAHSGALPFPSPG 1040
Score = 32.3 bits (72), Expect = 0.23
Identities = 47/153 (30%), Positives = 58/153 (37%), Gaps = 30/153 (19%)
Query: 5 WPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCL--LPGLAFALPWPDPRPT 62
+P P L+ P P+ P P + P +P P LP + ALP+P P P
Sbjct: 984 FPPQAPGLLPPQSPYPY-APQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPP 1042
Query: 63 ESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPAL-PWP 121
+ P L GP S GP A L + P S G++ PSP L P P
Sbjct: 1043 QPPHPP------LAYGPAPSTRPMGPQAA-----PLTIRGPSSA-GQST--PSPHLVPSP 1088
Query: 122 WPYHGLLLPWPGPTLAFSTLALPFPGVALPWPC 154
P P PGP P P A P PC
Sbjct: 1089 AP-----SPGPGP-------VPPRPPAAEPPPC 1109
>gi|167900478 POU class 2 associating factor 1 [Homo sapiens]
Length = 256
Score = 36.2 bits (82), Expect = 0.016
Identities = 42/141 (29%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 36 ALALPW---PWPCLLPGLAFALPWPDPRPTESMKWPWTC---LAILCPGPILSPPCSGPA 89
AL W P P L LA P+ + P E++ P++ + +CP + P S
Sbjct: 82 ALCAGWLSQPTPATLQPLAPWTPYTEYVPHEAVSCPYSADMYVQPVCPSYTVVGPSSVLT 141
Query: 90 LALALLLVLPLLWPCSVFGRALCYPSPALPWPWPYHGLLL---PWPGP--TLAFSTLALP 144
A L+ +V R+ P+ P P H L PWP P TL STL
Sbjct: 142 YASPPLIT-------NVTTRSSATPAVGPPLEGPEHQAPLTYFPWPQPLSTLPTSTLQYQ 194
Query: 145 FPGVALPWP-CPALALALPYP 164
P ALP P L +++P P
Sbjct: 195 PPAPALPGPQFVQLPISIPEP 215
Score = 29.6 bits (65), Expect = 1.5
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 12/68 (17%)
Query: 6 PSPGPSLILPCPSMPWPCP---HPALALHWSCPALALPWPWPCLLPGLAFALPWP----- 57
P GP P PWP P P L + PA ALP P LP ++P P
Sbjct: 164 PLEGPEHQAPLTYFPWPQPLSTLPTSTLQYQPPAPALPGPQFVQLP---ISIPEPVLQDM 220
Query: 58 -DPRPTES 64
DPR S
Sbjct: 221 EDPRRAAS 228
>gi|94536830 DMRT-like family C2 [Homo sapiens]
Length = 367
Score = 35.8 bits (81), Expect = 0.021
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLL----PGLAFALPWPDPRP 61
P P P P PW + HW P ++P P C L P ++ P+P P
Sbjct: 161 PEASPLSWTPVPPGPW------VPGHWLPPGFSMPPPVVCRLLYQEPAVSLP-PFPGFDP 213
Query: 62 TESMKWPWTCLAILCPG--PILSPPCSG 87
S++ P CPG P+L+ P SG
Sbjct: 214 GTSLQLPTHGPFTTCPGSHPVLTAPLSG 241
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 34.7 bits (78), Expect = 0.046
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 21/141 (14%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTE 63
P P+ P L PCP P+P P AL P + +P+P + P P P P
Sbjct: 399 PPPAKVPGLE-PCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPA-----PGVSPLPAP 452
Query: 64 SMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
+ +P T ++ P P P + +LPL + FG P P P P
Sbjct: 453 A-AFPPTPQSVPSPAPTPFP-----------IELLPLGYSEPAFGPCFSMPRGKPPAPSP 500
Query: 124 YHGLLLPWPGPTLAFSTLALP 144
P PTLA +T + P
Sbjct: 501 RGQKASP---PTLAPATASPP 518
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 34.7 bits (78), Expect = 0.046
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 21/141 (14%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTE 63
P P+ P L PCP P+P P AL P + +P+P + P P P P
Sbjct: 399 PPPAKVPGLE-PCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPA-----PGVSPLPAP 452
Query: 64 SMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
+ +P T ++ P P P + +LPL + FG P P P P
Sbjct: 453 A-AFPPTPQSVPSPAPTPFP-----------IELLPLGYSEPAFGPCFSMPRGKPPAPSP 500
Query: 124 YHGLLLPWPGPTLAFSTLALP 144
P PTLA +T + P
Sbjct: 501 RGQKASP---PTLAPATASPP 518
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 34.7 bits (78), Expect = 0.046
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 21/141 (14%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTE 63
P P+ P L PCP P+P P AL P + +P+P + P P P P
Sbjct: 399 PPPAKVPGLE-PCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPA-----PGVSPLPAP 452
Query: 64 SMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
+ +P T ++ P P P + +LPL + FG P P P P
Sbjct: 453 A-AFPPTPQSVPSPAPTPFP-----------IELLPLGYSEPAFGPCFSMPRGKPPAPSP 500
Query: 124 YHGLLLPWPGPTLAFSTLALP 144
P PTLA +T + P
Sbjct: 501 RGQKASP---PTLAPATASPP 518
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 34.7 bits (78), Expect = 0.046
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 21/141 (14%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTE 63
P P+ P L PCP P+P P AL P + +P+P + P P P P
Sbjct: 399 PPPAKVPGLE-PCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPA-----PGVSPLPAP 452
Query: 64 SMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
+ +P T ++ P P P + +LPL + FG P P P P
Sbjct: 453 A-AFPPTPQSVPSPAPTPFP-----------IELLPLGYSEPAFGPCFSMPRGKPPAPSP 500
Query: 124 YHGLLLPWPGPTLAFSTLALP 144
P PTLA +T + P
Sbjct: 501 RGQKASP---PTLAPATASPP 518
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 34.7 bits (78), Expect = 0.046
Identities = 54/161 (33%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 18 SMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPT-ESMKWPWTCLA-IL 75
S+P P PH L A ++P P P L P A A P P PT S P + A +L
Sbjct: 226 SVPAPVPHSGLVP--VQVATSVPAPSPPLAPVPALA-PAPPSVPTLISDSNPLSVSASVL 282
Query: 76 CPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCY-PSPALPWPWPYHGLLLPWPGP 134
P P +PP SGP + L+ PL P S AL P P P +L P P P
Sbjct: 283 VPVPASAPP-SGP-VPLSAPAPAPLSVPVSAPPLALIQAPVP----PSAPTLVLAPVPTP 336
Query: 135 TLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALV 175
LA + P P P P++ + P P G T L+
Sbjct: 337 VLAPMPASTP-PAAPAP---PSVPMPTPTPSSGPPSTPTLI 373
Score = 32.0 bits (71), Expect = 0.30
Identities = 45/175 (25%), Positives = 60/175 (34%), Gaps = 32/175 (18%)
Query: 4 PWPSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTE 63
P P+ P PS+P P P P+ P P L+P A P P P PT
Sbjct: 340 PMPASTPPAAPAPPSVPMPTPTPSSG----------PPSTPTLIPAFA---PTPVPAPT- 385
Query: 64 SMKWPWTCLAILCPGPILSP-PCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPW 122
P PI +P P PA A + + P S +C+P+ P
Sbjct: 386 -------------PAPIFTPAPTPMPAATPAAIPTSAPI-PASFSLSRVCFPAAQAPAMQ 431
Query: 123 PYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSALTLALVLS 177
P T + + +P P P L L G S LTL ++ S
Sbjct: 432 KVPLSFQPGTVLTPSQPLVYIPPPSCGQPLSVATLPTTL---GVSSTLTLPVLPS 483
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 34.7 bits (78), Expect = 0.046
Identities = 52/178 (29%), Positives = 69/178 (38%), Gaps = 43/178 (24%)
Query: 1 MTLPWPS-PGPSLILPCPSMPWPCPHPALALHWSCPALALP-----WPWPCLLPGLAFAL 54
M++P P P + P P+MP P P+L PAL P P + P L ++
Sbjct: 514 MSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSV 573
Query: 55 PWPDPRPTESMKWPWTCLAILCPGPILSPP---CSGPALALALLLVLPLLWPCSVFGRAL 111
P P P+ L+ P P+L PP +GP P+L P S+ A
Sbjct: 574 PPPGMPPS---------LSSAGPPPVLPPPSLSSAGPP---------PVLPPPSLSSTA- 614
Query: 112 CYPSPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALPYPGPGSA 169
P P +P P P P PG +P PGV P P A P P S+
Sbjct: 615 --PPPVMPLP-PLSSATPP-PG---------IPPPGV--PQGIPPQLTAAPVPPASSS 657
Score = 28.1 bits (61), Expect = 4.3
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 7 SPGPSLILPCPSMPWPCPHPAL---ALHWSCPALALPWPW-PCLLPGLAFALPWPDPRPT 62
S GP +LP PS+ P P + L + P +P P P +P A P P +
Sbjct: 598 SAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSS 657
Query: 63 ESMKWPWTCLAILCPGPI 80
+S + P L P P+
Sbjct: 658 QSSQVPEKPRPALLPTPV 675
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 34.7 bits (78), Expect = 0.046
Identities = 47/153 (30%), Positives = 53/153 (34%), Gaps = 35/153 (22%)
Query: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPW---PDPRPT 62
P PGP + P P+ P P P L P A P+ P +PGL LP P P P
Sbjct: 406 PMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPG 465
Query: 63 ESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYPSPALPW-P 121
P L PG PP GP L P PA P P
Sbjct: 466 RPPGPPPGPPPGLPPG----PPPRGPPPRL---------------------PPPAPPGIP 500
Query: 122 WPYHGLLLP------WPGPTLAFSTLALPFPGV 148
P G++ P P P F LP PGV
Sbjct: 501 PPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGV 533
>gi|169213703 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 34.3 bits (77), Expect = 0.060
Identities = 36/93 (38%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 12 LILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMKWPWTC 71
L LP PS P P L+L S L LP WP L G + ALP + WP
Sbjct: 177 LRLPHPSSPGVLPWRCLSLSVSDLKLPLPPSWPWL--GFSAALPAAFRPCSAPPAWPRLL 234
Query: 72 -LAILCPGPI----LSPPCSG---PALALALLL 96
LA+ P P+ L PP G PALA LL
Sbjct: 235 PLALAFPVPLGRPRLPPPVFGSTRPALASPPLL 267
Score = 31.2 bits (69), Expect = 0.51
Identities = 48/169 (28%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 7 SPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESMK 66
SP +LP S+ +P HP L L + PA P P LL A + P
Sbjct: 62 SPTRPRLLP-RSLGYPLRHP-LDLGFQGPASVRPPSTPHLLSASALSAQLDSPARPHPRC 119
Query: 67 WPWTCLAILCPGPILSPPCSGPALALALLLVLPLLWPCSVFGRALCYP------------ 114
+P A+ P PP G + P P +F RA P
Sbjct: 120 YP--PFALSAP----RPPALGASATAFRSSSDPPARP-RLFRRASASPAQLRLPSRLASA 172
Query: 115 -SPALPWPWPYHGLLLPWPGPTLAFSTLALPFPGVALPWPCPALALALP 162
S L P P +LPW +L+ S L LP P WP + ALP
Sbjct: 173 LSAQLRLPHPSSPGVLPWRCLSLSVSDLKLPLPP---SWPWLGFSAALP 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.146 0.585
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,446,507
Number of Sequences: 37866
Number of extensions: 869783
Number of successful extensions: 4082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 221
Number of HSP's that attempted gapping in prelim test: 2885
Number of HSP's gapped (non-prelim): 627
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.