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Search of human proteins with 239743710
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo
sapiens]
(522 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo ... 1093 0.0
gi|239755004 PREDICTED: hypothetical protein [Homo sapiens] 1050 0.0
gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo ... 930 0.0
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 43 8e-04
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 42 0.001
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 42 0.002
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens] 42 0.002
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 41 0.003
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 40 0.004
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 40 0.004
gi|115511036 alpha-kinase 3 [Homo sapiens] 40 0.004
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 40 0.005
gi|54873602 hypothetical protein LOC220382 [Homo sapiens] 40 0.005
gi|226498192 atonal homolog 8 [Homo sapiens] 40 0.007
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 40 0.007
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 40 0.007
gi|197333868 T-box 2 [Homo sapiens] 39 0.009
gi|126090909 engrailed homeobox 1 [Homo sapiens] 39 0.009
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 39 0.009
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 39 0.009
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 39 0.009
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 39 0.012
gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 39 0.012
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 39 0.015
gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sap... 39 0.015
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 38 0.020
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 38 0.020
gi|239745938 PREDICTED: hypothetical protein [Homo sapiens] 38 0.020
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 38 0.020
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 38 0.020
>gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo
sapiens]
Length = 522
Score = 1093 bits (2826), Expect = 0.0
Identities = 522/522 (100%), Positives = 522/522 (100%)
Query: 1 MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA 60
MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA
Sbjct: 1 MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA 60
Query: 61 ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT 120
ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT
Sbjct: 61 ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT 120
Query: 121 ASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQR 180
ASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQR
Sbjct: 121 ASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQR 180
Query: 181 EGQGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKA 240
EGQGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKA
Sbjct: 181 EGQGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKA 240
Query: 241 HGAHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRS 300
HGAHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRS
Sbjct: 241 HGAHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRS 300
Query: 301 GDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQ 360
GDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQ
Sbjct: 301 GDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQ 360
Query: 361 EQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQ 420
EQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQ
Sbjct: 361 EQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQ 420
Query: 421 SERPGHLGTALRLNHFLGGSTEEWGGAAQGRQGGGAKSPSGRCQGLQARSDLASATLHTD 480
SERPGHLGTALRLNHFLGGSTEEWGGAAQGRQGGGAKSPSGRCQGLQARSDLASATLHTD
Sbjct: 421 SERPGHLGTALRLNHFLGGSTEEWGGAAQGRQGGGAKSPSGRCQGLQARSDLASATLHTD 480
Query: 481 RCGDSETQNGRARPSSLAGEADEPGSEAFWDSTIVKARLYQD 522
RCGDSETQNGRARPSSLAGEADEPGSEAFWDSTIVKARLYQD
Sbjct: 481 RCGDSETQNGRARPSSLAGEADEPGSEAFWDSTIVKARLYQD 522
>gi|239755004 PREDICTED: hypothetical protein [Homo sapiens]
Length = 558
Score = 1050 bits (2716), Expect = 0.0
Identities = 514/558 (92%), Positives = 516/558 (92%), Gaps = 36/558 (6%)
Query: 1 MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA 60
MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA
Sbjct: 1 MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA 60
Query: 61 ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT 120
ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT
Sbjct: 61 ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT 120
Query: 121 A-SPGCSEEVHGQ-----------------------------------RSSFRPGWSRVL 144
S S ++ GQ RSSFRPGWSRVL
Sbjct: 121 GVSHLLSSQLRGQGALESCGGILPLAAQRRSMDKASGYVRACPLLSIRRSSFRPGWSRVL 180
Query: 145 AKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQREGQGGWDDAPAVLHHPCVWPPLHS 204
AKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQREGQGGWDDAPAVLHHPCVWPPLHS
Sbjct: 181 AKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQREGQGGWDDAPAVLHHPCVWPPLHS 240
Query: 205 CCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKAHGAHPATRIHEHPLQLLVGQHVAW 264
CCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKAHGAHPATRIHEHPLQLLVGQHVAW
Sbjct: 241 CCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKAHGAHPATRIHEHPLQLLVGQHVAW 300
Query: 265 VQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRSGDGAFGTLGSAPRPAAPLPALCPL 324
VQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRSGDGAFGTLGSAPRPAAPLPALCPL
Sbjct: 301 VQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRSGDGAFGTLGSAPRPAAPLPALCPL 360
Query: 325 TSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQ 384
TSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQ
Sbjct: 361 TSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQ 420
Query: 385 LRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEEW 444
LRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEEW
Sbjct: 421 LRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEEW 480
Query: 445 GGAAQGRQGGGAKSPSGRCQGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEP 504
GGAAQGRQGGGAKSPSGRCQGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEP
Sbjct: 481 GGAAQGRQGGGAKSPSGRCQGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEP 540
Query: 505 GSEAFWDSTIVKARLYQD 522
GSEAFWDSTIVKARLYQD
Sbjct: 541 GSEAFWDSTIVKARLYQD 558
>gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo
sapiens]
Length = 443
Score = 930 bits (2404), Expect = 0.0
Identities = 442/443 (99%), Positives = 443/443 (100%)
Query: 1 MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA 60
MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA
Sbjct: 1 MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQA 60
Query: 61 ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT 120
ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT
Sbjct: 61 ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT 120
Query: 121 ASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQR 180
ASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQR
Sbjct: 121 ASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQR 180
Query: 181 EGQGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKA 240
EGQGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKA
Sbjct: 181 EGQGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKA 240
Query: 241 HGAHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRS 300
HGAHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRS
Sbjct: 241 HGAHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRS 300
Query: 301 GDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQ 360
GDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQ
Sbjct: 301 GDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQ 360
Query: 361 EQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQ 420
EQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQ
Sbjct: 361 EQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQ 420
Query: 421 SERPGHLGTALRLNHFLGGSTEE 443
SERPGHLGTALRLNHFLGGSTE+
Sbjct: 421 SERPGHLGTALRLNHFLGGSTED 443
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 42.7 bits (99), Expect = 8e-04
Identities = 68/238 (28%), Positives = 85/238 (35%), Gaps = 44/238 (18%)
Query: 281 VQPWRRQRGGGVRAGTGPRSGDGAFGTLGSAPRPA--APLPALCPLTSVLPRQLRYLFAL 338
VQP RR G PR+ GA +A P AP P P+ + P + A
Sbjct: 99 VQPPRR----GATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAA 154
Query: 339 EDEALRTQPEPDDLGQHRCDSQEQRGPRPPPAHGP-LHPGGRPGTAQLRREPGPE-ALRS 396
A P P G + P P PA P + P P RR P P A R
Sbjct: 155 AATA-PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGP-----RRAPPPAVAARE 208
Query: 397 RPRSPPAAHEALPRHRR------------GTARPDQSERPGHLGTALRLNHFLGGSTEEW 444
P PP A P+ ++ G R + RP L +R +LGGS
Sbjct: 209 PPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVR---YLGGS---- 261
Query: 445 GGAAQGRQGGGAKSPSGRCQGLQARSDLASATLHTDRCG----DSETQNGRARPSSLA 498
GGA G + GR QGL A L R G + GRA P++ A
Sbjct: 262 GGA-------GGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPGRAPPAASA 312
Score = 30.0 bits (66), Expect = 5.4
Identities = 21/69 (30%), Positives = 26/69 (37%)
Query: 6 AEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALASA 65
A P G AA + P P+ P AR P AA APP+ A
Sbjct: 110 APPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGP 169
Query: 66 GSRRCAPAA 74
++R AP A
Sbjct: 170 RAQRAAPLA 178
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 42.4 bits (98), Expect = 0.001
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 311 APRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCDSQEQRGPRPPPA 370
AP+P + P PL+ + L L L A R PEP + + +S ++R P PP
Sbjct: 964 APKPTSQTPPASPLSKLSRPYLVEL--LSRRAGRPDPEPSEPSKEDQESSDRRPPSPP-- 1019
Query: 371 HGPLHPGGRPGTAQLRREPGPEALRSRPRSP--PAAHEALPRHRRGTARPDQSERPGHLG 428
GP G+ +R+ EA +P SP PA + P T + E+P
Sbjct: 1020 -GPEERKGQ------KRDEEEEATERKPASPPLPATQQEKPSQ---TPEAGRKEKP---- 1065
Query: 429 TALRLNHFLGGS--TEE-------WGGAAQGRQGGGAKSPSGRCQGLQAR 469
L+ H L GS TE+ W A +Q G + + R + QAR
Sbjct: 1066 -MLQSRHSLDGSKLTEKVETAQPLWITLALQKQKGFREQQATREERKQAR 1114
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 41.6 bits (96), Expect = 0.002
Identities = 64/246 (26%), Positives = 81/246 (32%), Gaps = 29/246 (11%)
Query: 3 GGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAAL 62
GGG G G P AE SL + + P ++ A P + ++
Sbjct: 57 GGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSS 116
Query: 63 ASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPTA- 121
A+ S P + CS AA G GG GG G G GS A P
Sbjct: 117 AATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTG---TGSGASCCPCCC 173
Query: 122 ------SPGCSEEVHGQRSSFRPGW-----SRVLAKEVGGELKPEAPSI----------G 160
PG G S R W S VL GG L ++
Sbjct: 174 CCGCPDRPGRRGRRRGCAPSPRCRWGYQALSVVLLLAQGGLLDLYLIAVTDLYWCSWIAT 233
Query: 161 AKSIEEGEEVLGAEDSVGQREGQGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAA 220
+ G + A++S G+R G LHH PPLH L P A
Sbjct: 234 DLVVVVGWAIFFAKNSRGRRGGAASGAHNHH-LHHHHAAPPLH---LPAPSAATAGAKAR 289
Query: 221 GAQGGA 226
GA+GGA
Sbjct: 290 GARGGA 295
>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
Length = 1159
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/109 (34%), Positives = 40/109 (36%), Gaps = 6/109 (5%)
Query: 294 AGTGPRSGDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLG 353
A GP G AP P AP P P + L L L A A PEP LG
Sbjct: 2 AHRGPSRASKGPGPTARAPSPGAPPPPRSPRSRPLLLLLLLLGAC--GAAGRSPEPGRLG 59
Query: 354 QHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPP 402
H +Q R PR PPA G PGG EPG P P
Sbjct: 60 PH---AQLTRVPRSPPA-GRAEPGGGEDRQARGTEPGAPGPSPGPAPGP 104
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 40.8 bits (94), Expect = 0.003
Identities = 50/160 (31%), Positives = 59/160 (36%), Gaps = 45/160 (28%)
Query: 20 AESRRPAPSLRA---PRGRTHL------PGVARCPWRLHG-----------AAFAPPASQ 59
A S RP + RA P R L PG+ + P G AA A AS
Sbjct: 313 ATSIRPLDTFRALSHPYSRPELLCSFRHPGLYQAPAAAAGLNSAASAAAAAAAAAAAASS 372
Query: 60 AALASA----GSRRCA---------PAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAW 106
AA A A GS C+ AA ++ AL R GG GGG G GG GA
Sbjct: 373 AAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSRGGGGGGGGGGGGGGGGAGAG 432
Query: 107 GEAPVGSAALSSPTASPGCSEEVHGQRSSFRPGWSRVLAK 146
G + GCS S F P + VL+K
Sbjct: 433 GGSDF------------GCSAAAPRSESGFLPYSAAVLSK 460
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 40.4 bits (93), Expect = 0.004
Identities = 51/161 (31%), Positives = 66/161 (40%), Gaps = 29/161 (18%)
Query: 365 PRPPPAHGPLHPGGRPG--------TAQLRREPGPEALRSRPRSPPAAHEAL--PRHRRG 414
P PP G GGRP TA +PGP A +R R P A A PR R
Sbjct: 181 PTPPRQEGSF--GGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSR 238
Query: 415 TARPDQSERPGHLGTALRLN-------HFLGGSTEEWGGAAQGRQGGGAKSPS--GR-CQ 464
ARP + PG L A R F GG E A + GGG ++P GR
Sbjct: 239 AARPPPAPGPGALSRASRSRAAGRPGPGFHGG---EKAAAPRAPGGGGGRNPGALGRAAP 295
Query: 465 GLQARSD---LASATLHTDRCGDSETQNGRARPSSLAGEAD 502
+AR D L+ R GD + + G ++P + +G +
Sbjct: 296 PSRARQDAWGLSGCATVGLRRGDCD-RAGSSQPPATSGNGE 335
Score = 31.2 bits (69), Expect = 2.4
Identities = 34/114 (29%), Positives = 39/114 (34%), Gaps = 12/114 (10%)
Query: 6 AEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALASA 65
A P G G+ R AP RA + L G A R G +SQ S
Sbjct: 274 AAPRAPGGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLR-RGDCDRAGSSQPPATSG 332
Query: 66 GSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWG---EAPVGSAAL 116
RC C RR GG G GT A G G + VG+A L
Sbjct: 333 NGERCR--------FCRRRRRRGGGGEGEGTHATHGPASPPGRRHDEEVGAAVL 378
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 40.4 bits (93), Expect = 0.004
Identities = 59/199 (29%), Positives = 69/199 (34%), Gaps = 27/199 (13%)
Query: 285 RRQRGGGVRA----GTGPRSGDGAFGTL--------GSAPRPAAPLPALCPLTSVLPRQL 332
RR+ G G G GP G G TL GSA + P+L + P
Sbjct: 37 RRRAGEGAAGRRDGGWGPPGGAGDHQTLQRASLLPGGSADKDQEREPSLAARGTAPPAPP 96
Query: 333 RYLFALE----DEALRTQPEPDDLGQHRCDSQEQRGPR-----PPPAHGPLHPGGRPGTA 383
R LR +P P RC GPR PPPA P G+ A
Sbjct: 97 RQCLPTPCPPLGHGLRPRPPPGT-PPPRCPRTLAPGPRGLFPAPPPAPARTGPAGK--AA 153
Query: 384 QLRREPGPEALRSRPRSPPAAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEE 443
R PGP A R RSP L + R G P L A+RL GGS E+
Sbjct: 154 ADRGRPGPAAGRRVRRSPSFPPFLLAQTRLGRTGPLALCLLLLLHGAMRLG---GGSREK 210
Query: 444 WGGAAQGRQGGGAKSPSGR 462
GR + GR
Sbjct: 211 LACGRAGRAARTGRGEGGR 229
Score = 37.4 bits (85), Expect = 0.034
Identities = 45/149 (30%), Positives = 55/149 (36%), Gaps = 48/149 (32%)
Query: 12 TGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALASAGSRRCA 71
TGP G+ AA+ RP P+ GR V R P +F P LA R
Sbjct: 146 TGPAGKAAADRGRPGPA----AGRR----VRRSP------SFPP----FLLAQTRLGRTG 187
Query: 72 PAALC--------SSGGCALTRRAACG--GRGGGTRAGQGGRGAWGEAPVGSAALSSPTA 121
P ALC G + ACG GR T G+GGR A
Sbjct: 188 PLALCLLLLLHGAMRLGGGSREKLACGRAGRAARTGRGEGGRRA---------------- 231
Query: 122 SPGCSEEVHGQRSSFRPGWSRVLAKEVGG 150
EE G+R RPG +R + + GG
Sbjct: 232 ----EEEAAGRRRRRRPGRTRGIPRAAGG 256
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 40.4 bits (93), Expect = 0.004
Identities = 54/211 (25%), Positives = 75/211 (35%), Gaps = 15/211 (7%)
Query: 3 GGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAAL 62
G GA PG GT R R G+ + AR P ++ A P A AA
Sbjct: 118 GLGAGPGAGTWAPAPPGVSKPRCPGRARPGEGQQQVT-TARPP-AINRGARQPRAGAAAA 175
Query: 63 A---SAGSRRCAPAALCSS-----GGCALTRRAACGGRGGGTRAGQGGRG-----AWGEA 109
AG+ R AA + GG +RRA G G G R+G GG G W +
Sbjct: 176 GRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPSRGWGAGGRSGAGGDGEDDGPVWIPS 235
Query: 110 PVGSAALSSPTASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEE 169
P + L S S SS R + ++A+ ++ ++S+ E +
Sbjct: 236 PASRSYLLSVRPETSLSSNRLSHPSSGRSTFCSIIAQLTEETQPLFETTLKSRSVSEDSD 295
Query: 170 VLGAEDSVGQREGQGGWDDAPAVLHHPCVWP 200
V G E + W L C P
Sbjct: 296 VRFTCIVTGYPEPEVTWYKDDTELDRYCGLP 326
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 40.0 bits (92), Expect = 0.005
Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 18/126 (14%)
Query: 298 PRSGDGAFGTLGSAPRPAAPLPA-------LCPLTSVLPRQLRYLFALEDEALR---TQP 347
P + GT P PLP L +V PR R + AL +E L+ QP
Sbjct: 557 PGAEPSTSGTTDEEPEELRPLPEEGEERRRLGAEPTVRPRG-RSMQALAEEDLQHLPPQP 615
Query: 348 EPDDLGQHRCDSQEQRGPRP-PPAHGPLHPGGRPGTAQLRREPGPEALRSRPRS--PPAA 404
P L Q S+ + P P P+H PLH G RP RRE P + + S PP
Sbjct: 616 LPPQLSQGDGRSETSQPPTPGSPSHSPLHSGPRP----RRRESDPTGPQRQVFSVAPPFE 671
Query: 405 HEALPR 410
LPR
Sbjct: 672 VNGLPR 677
Score = 29.3 bits (64), Expect = 9.2
Identities = 43/186 (23%), Positives = 59/186 (31%), Gaps = 39/186 (20%)
Query: 231 ILGQRGVQKAHGAHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGG 290
+ Q+ ++HGA PA L + + PP G R ++
Sbjct: 1168 VAAQQPASRSHGAAPA-------LDTAITSRLQLQTPP--------GSATAADLRPKQPP 1212
Query: 291 GVRAGTGPRSGDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPD 350
G G GP G + RP AP P ++ R + + R P P
Sbjct: 1213 G--RGLGP-------GRAQAGARPPAPRSPRLPASTSAARNASASPRSQSLSRRESPSP- 1262
Query: 351 DLGQHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPR 410
S + R PPP P P AQ P P + PR A A +
Sbjct: 1263 --------SHQARPGVPPPRGVP------PARAQPDGTPSPGGSKKGPRGKLQAQRATTK 1308
Query: 411 HRRGTA 416
R G A
Sbjct: 1309 GRAGGA 1314
>gi|54873602 hypothetical protein LOC220382 [Homo sapiens]
Length = 426
Score = 40.0 bits (92), Expect = 0.005
Identities = 51/184 (27%), Positives = 72/184 (39%), Gaps = 21/184 (11%)
Query: 5 GAEPGTGTGPDGQEAAES--RRPAPSLRAPRGRTHLPGVARCPWR--LHGAAFAPPASQA 60
GA P GP AA++ +RP + AP G A P R AA A S++
Sbjct: 109 GAAP---PGPPSPSAADTPAKRPLAAPSAPTVAAPAHGKA-APRREASQAAAAASLQSRS 164
Query: 61 ALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPT 120
A S R P +GG A GG AG GG G P G+ T
Sbjct: 165 LAALFDSLRHVPGGAEPAGGEVAAPAAGLGG------AGTGGAGGDVAGPAGA------T 212
Query: 121 ASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQR 180
A PG + +V + + P + ++ GG P P + +E+G E + + +G
Sbjct: 213 AIPG-ARKVPLRARNLPPSFFTEPSRAGGGGCGPSGPDVSLGDLEKGAEAVEFFELLGPD 271
Query: 181 EGQG 184
G G
Sbjct: 272 YGAG 275
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 39.7 bits (91), Expect = 0.007
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 365 PRPPPAHGPLHPGGRPGTAQLRREPG--PEALRSRP--RSPPAAHEALPRHRRGTARPDQ 420
P PPPA PGG AQ REPG P L P R P+A A P T RP
Sbjct: 126 PPPPPAPQSQAPGGPE--AQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVRPAP 183
Query: 421 SERPGHLGTALRLNHFLGGSTEEWGGAAQGRQGGGAKSPSGRCQGL-QARSDLASATLHT 479
RPG + ++H + + ++ A+ ++ G A + S + L Q R LA+A T
Sbjct: 184 PTRPGE-SSYSSISHVIYNNHQD-SSASPRKRPGEATAASSEIKALQQTRRLLANARERT 241
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 39.7 bits (91), Expect = 0.007
Identities = 70/238 (29%), Positives = 84/238 (35%), Gaps = 47/238 (19%)
Query: 291 GVRAGTGPRSGDGAFGTLGSAPRPAAPLPALC---PLTSVLPRQLRYLFALEDEALRTQP 347
G TG R +GA G G P +P PA P T +P A +
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPG-----------AKGSAG 423
Query: 348 EPDDLGQHRCDSQEQRGPRPPP----AHGPLHPGGR---PGTAQLRREPGP--EALRSRP 398
P G + GPR PP A GPL P G+ PG A + E GP E + P
Sbjct: 424 APGIAG-----APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGP 478
Query: 399 RSPPA-AHEALPRHRRG-------TARPDQSERPGHLGTALRLNHFLGGSTEEWGGAAQG 450
+ P A E R RG P + PG+ G F G A G
Sbjct: 479 QGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRG-------FPGQDGLAGPKGAPG 531
Query: 451 RQG-GGAKSPSGR--CQGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEPG 505
+G G P G G L A T R GD+ Q G+ PS GE PG
Sbjct: 532 ERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQ-GKVGPSGAPGEDGRPG 588
Score = 33.5 bits (75), Expect = 0.49
Identities = 45/148 (30%), Positives = 57/148 (38%), Gaps = 26/148 (17%)
Query: 285 RRQRGG-GVRAGTGPRSGDGAFGTLGSAPRPAAPLPALCP-LTSVLPRQLRYLFALEDEA 342
R RG G + GPR DG GT G+ P P P P L Q+ F +++A
Sbjct: 134 RGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGF--DEKA 191
Query: 343 LRTQPEPDDLGQHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPP 402
Q LG +GP GP+ P G PG A PGP+ + P P
Sbjct: 192 GGAQ-----LGV-------MQGPM-----GPMGPRGPPGPAGA---PGPQGFQGNPGEPG 231
Query: 403 AAHEALPRHRRGTARPDQSERPGHLGTA 430
+ P RG P +PG G A
Sbjct: 232 EPGVSGPMGPRGP--PGPPGKPGDDGEA 257
Score = 33.5 bits (75), Expect = 0.49
Identities = 46/189 (24%), Positives = 63/189 (33%), Gaps = 24/189 (12%)
Query: 2 EGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAA 61
E G P GP G + +R L RG PG+ P Q A
Sbjct: 958 EPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLP--------GPSGEPGKQGA 1009
Query: 62 LASAGSR----RCAPAALCSSGGCALTRRAACGGRGGGTRAGQGG-RGAWGE-APVGSAA 115
++G R P L G R + G G R G G +G GE VG+
Sbjct: 1010 PGASGDRGPPGPVGPPGLTGPAG-EPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPG 1068
Query: 116 LSSPTASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAED 175
P SPG + Q G G + P P+ GA+ I+ + G +
Sbjct: 1069 APGPPGSPGPAGPTGKQGDRGEAG--------AQGPMGPSGPA-GARGIQGPQGPRGDKG 1119
Query: 176 SVGQREGQG 184
G+ +G
Sbjct: 1120 EAGEPGERG 1128
Score = 33.1 bits (74), Expect = 0.63
Identities = 34/121 (28%), Positives = 43/121 (35%), Gaps = 29/121 (23%)
Query: 364 GPRPPPAHGPLHPG-----GRPGTAQLRREPGPEALRSRPRSP----------------P 402
GPR PP P PG G+PG A R PGP+ R P +P
Sbjct: 240 GPRGPPGP-PGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGA 298
Query: 403 AAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEEWG--GAAQGRQGGGAKSPS 460
P + + P ++ PG +G L G G GAA R G P+
Sbjct: 299 KGEAGAPGVKGESGSPGENGSPGPMGP-----RGLPGERGRTGPAGAAGARGNDGQPGPA 353
Query: 461 G 461
G
Sbjct: 354 G 354
Score = 31.2 bits (69), Expect = 2.4
Identities = 120/524 (22%), Positives = 158/524 (30%), Gaps = 103/524 (19%)
Query: 4 GGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALA 63
G A P GP G E RP P P+G PGV P A + L
Sbjct: 567 GDAGPQGKVGPSGAP-GEDGRPGPP--GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLP 623
Query: 64 SAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQ-GGRGAWGEAPVGSAALSSPTAS 122
A R P +G A G G AG+ G +GA G P G L P
Sbjct: 624 GAPGLRGLPGKDGETG--------AAGPPGPAGPAGERGEQGAPG--PSGFQGLPGPPGP 673
Query: 123 PGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQREG 182
PG + Q G ++ E S GA+ ++ + G + G +
Sbjct: 674 PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGA 733
Query: 183 QGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKAHG 242
G P P P L P R AAG G ++ +G++G + A G
Sbjct: 734 SG--PAGPPGAQGP---PGLQG--------MPGERGAAGIAGPKGDRGDVGEKGPEGAPG 780
Query: 243 AHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRSGD 302
+ + PP E + V P G R G R
Sbjct: 781 KDGGRGL------------TGPIGPPGPAGANGE-KGEVGPPGPAGSAGARGAPGERGET 827
Query: 303 GAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQH-RCDSQE 361
G G G A P A D + E + GQ +
Sbjct: 828 GPPGPAGFAGPPGA-----------------------DGQPGAKGEQGEAGQKGDAGAPG 864
Query: 362 QRGPRPPP----------------AHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAH 405
+GP P A GP G PG A PG P P +
Sbjct: 865 PQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSG 924
Query: 406 EALPRHRRG-TARPDQSERPGHLGTALRLNHFLGGSTEEWGGAAQGRQG-GGAKSPSGRC 463
+ P+ RG + P ++ PG G A G E G G G GA+ P G
Sbjct: 925 KDGPKGARGDSGPPGRAGEPGLQGPA--------GPPGEKG--EPGDDGPSGAEGPPGP- 973
Query: 464 QGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEPGSE 507
QGL + + Q G L G + EPG +
Sbjct: 974 QGLAGQRGIVGL----------PGQRGERGFPGLPGPSGEPGKQ 1007
Score = 29.6 bits (65), Expect = 7.0
Identities = 48/198 (24%), Positives = 63/198 (31%), Gaps = 17/198 (8%)
Query: 1 MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWR--LHGAAFAP--P 56
+ G PG G G G + AP L PRG PG P L G P P
Sbjct: 667 LPGPPGPPGEG-GKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTP 725
Query: 57 ASQAALASAGSRRCAPAALCSSGGCALTRRAACGGRGG--GTRAGQGGRGAWG-EAPVGS 113
+ ++G P A G + G G G R G +G G G
Sbjct: 726 GTDGPKGASGPAG-PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGG 784
Query: 114 AALSSPTASPGCSEEVHGQRSSFRPGWSRVLAKEVG-----GELKPEAPS--IGAKSIEE 166
L+ P PG +G++ P A G GE P P+ G +
Sbjct: 785 RGLTGPIGPPG-PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 843
Query: 167 GEEVLGAEDSVGQREGQG 184
G + GQ+ G
Sbjct: 844 QPGAKGEQGEAGQKGDAG 861
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 39.7 bits (91), Expect = 0.007
Identities = 70/238 (29%), Positives = 84/238 (35%), Gaps = 47/238 (19%)
Query: 291 GVRAGTGPRSGDGAFGTLGSAPRPAAPLPALC---PLTSVLPRQLRYLFALEDEALRTQP 347
G TG R +GA G G P +P PA P T +P A +
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPG-----------AKGSAG 354
Query: 348 EPDDLGQHRCDSQEQRGPRPPP----AHGPLHPGGR---PGTAQLRREPGP--EALRSRP 398
P G + GPR PP A GPL P G+ PG A + E GP E + P
Sbjct: 355 APGIAG-----APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGP 409
Query: 399 RSPPA-AHEALPRHRRG-------TARPDQSERPGHLGTALRLNHFLGGSTEEWGGAAQG 450
+ P A E R RG P + PG+ G F G A G
Sbjct: 410 QGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRG-------FPGQDGLAGPKGAPG 462
Query: 451 RQG-GGAKSPSGR--CQGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEPG 505
+G G P G G L A T R GD+ Q G+ PS GE PG
Sbjct: 463 ERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQ-GKVGPSGAPGEDGRPG 519
Score = 33.5 bits (75), Expect = 0.49
Identities = 45/148 (30%), Positives = 57/148 (38%), Gaps = 26/148 (17%)
Query: 285 RRQRGG-GVRAGTGPRSGDGAFGTLGSAPRPAAPLPALCP-LTSVLPRQLRYLFALEDEA 342
R RG G + GPR DG GT G+ P P P P L Q+ F +++A
Sbjct: 65 RGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGF--DEKA 122
Query: 343 LRTQPEPDDLGQHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPP 402
Q LG +GP GP+ P G PG A PGP+ + P P
Sbjct: 123 GGAQ-----LGV-------MQGPM-----GPMGPRGPPGPAGA---PGPQGFQGNPGEPG 162
Query: 403 AAHEALPRHRRGTARPDQSERPGHLGTA 430
+ P RG P +PG G A
Sbjct: 163 EPGVSGPMGPRGP--PGPPGKPGDDGEA 188
Score = 33.5 bits (75), Expect = 0.49
Identities = 46/189 (24%), Positives = 63/189 (33%), Gaps = 24/189 (12%)
Query: 2 EGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAA 61
E G P GP G + +R L RG PG+ P Q A
Sbjct: 889 EPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLP--------GPSGEPGKQGA 940
Query: 62 LASAGSR----RCAPAALCSSGGCALTRRAACGGRGGGTRAGQGG-RGAWGE-APVGSAA 115
++G R P L G R + G G R G G +G GE VG+
Sbjct: 941 PGASGDRGPPGPVGPPGLTGPAG-EPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPG 999
Query: 116 LSSPTASPGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAED 175
P SPG + Q G G + P P+ GA+ I+ + G +
Sbjct: 1000 APGPPGSPGPAGPTGKQGDRGEAG--------AQGPMGPSGPA-GARGIQGPQGPRGDKG 1050
Query: 176 SVGQREGQG 184
G+ +G
Sbjct: 1051 EAGEPGERG 1059
Score = 33.1 bits (74), Expect = 0.63
Identities = 34/121 (28%), Positives = 43/121 (35%), Gaps = 29/121 (23%)
Query: 364 GPRPPPAHGPLHPG-----GRPGTAQLRREPGPEALRSRPRSP----------------P 402
GPR PP P PG G+PG A R PGP+ R P +P
Sbjct: 171 GPRGPPGP-PGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGA 229
Query: 403 AAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEEWG--GAAQGRQGGGAKSPS 460
P + + P ++ PG +G L G G GAA R G P+
Sbjct: 230 KGEAGAPGVKGESGSPGENGSPGPMGP-----RGLPGERGRTGPAGAAGARGNDGQPGPA 284
Query: 461 G 461
G
Sbjct: 285 G 285
Score = 31.2 bits (69), Expect = 2.4
Identities = 120/524 (22%), Positives = 158/524 (30%), Gaps = 103/524 (19%)
Query: 4 GGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALA 63
G A P GP G E RP P P+G PGV P A + L
Sbjct: 498 GDAGPQGKVGPSGAP-GEDGRPGPP--GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLP 554
Query: 64 SAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQ-GGRGAWGEAPVGSAALSSPTAS 122
A R P +G A G G AG+ G +GA G P G L P
Sbjct: 555 GAPGLRGLPGKDGETG--------AAGPPGPAGPAGERGEQGAPG--PSGFQGLPGPPGP 604
Query: 123 PGCSEEVHGQRSSFRPGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQREG 182
PG + Q G ++ E S GA+ ++ + G + G +
Sbjct: 605 PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGA 664
Query: 183 QGGWDDAPAVLHHPCVWPPLHSCCLTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKAHG 242
G P P P L P R AAG G ++ +G++G + A G
Sbjct: 665 SG--PAGPPGAQGP---PGLQG--------MPGERGAAGIAGPKGDRGDVGEKGPEGAPG 711
Query: 243 AHPATRIHEHPLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRSGD 302
+ + PP E + V P G R G R
Sbjct: 712 KDGGRGL------------TGPIGPPGPAGANGE-KGEVGPPGPAGSAGARGAPGERGET 758
Query: 303 GAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQH-RCDSQE 361
G G G A P A D + E + GQ +
Sbjct: 759 GPPGPAGFAGPPGA-----------------------DGQPGAKGEQGEAGQKGDAGAPG 795
Query: 362 QRGPRPPP----------------AHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAH 405
+GP P A GP G PG A PG P P +
Sbjct: 796 PQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSG 855
Query: 406 EALPRHRRG-TARPDQSERPGHLGTALRLNHFLGGSTEEWGGAAQGRQG-GGAKSPSGRC 463
+ P+ RG + P ++ PG G A G E G G G GA+ P G
Sbjct: 856 KDGPKGARGDSGPPGRAGEPGLQGPA--------GPPGEKG--EPGDDGPSGAEGPPGP- 904
Query: 464 QGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEPGSE 507
QGL + + Q G L G + EPG +
Sbjct: 905 QGLAGQRGIVGL----------PGQRGERGFPGLPGPSGEPGKQ 938
Score = 29.6 bits (65), Expect = 7.0
Identities = 48/198 (24%), Positives = 63/198 (31%), Gaps = 17/198 (8%)
Query: 1 MEGGGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWR--LHGAAFAP--P 56
+ G PG G G G + AP L PRG PG P L G P P
Sbjct: 598 LPGPPGPPGEG-GKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTP 656
Query: 57 ASQAALASAGSRRCAPAALCSSGGCALTRRAACGGRGG--GTRAGQGGRGAWG-EAPVGS 113
+ ++G P A G + G G G R G +G G G
Sbjct: 657 GTDGPKGASGPAG-PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGG 715
Query: 114 AALSSPTASPGCSEEVHGQRSSFRPGWSRVLAKEVG-----GELKPEAPS--IGAKSIEE 166
L+ P PG +G++ P A G GE P P+ G +
Sbjct: 716 RGLTGPIGPPG-PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 774
Query: 167 GEEVLGAEDSVGQREGQG 184
G + GQ+ G
Sbjct: 775 QPGAKGEQGEAGQKGDAG 792
>gi|197333868 T-box 2 [Homo sapiens]
Length = 712
Score = 39.3 bits (90), Expect = 0.009
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 31 APRGRTHLPGVARCPWRLHGAAFAPP--ASQAALASAGSRRCAPAALCSSGGCALTRRAA 88
+P G HLPG+A LHG F P A Q G P A + G L A
Sbjct: 458 SPLGAGHLPGLAFSS-HLHGQQFFGPLGAGQPLFLHPGQFTMGPGAFSAMGMGHLLASVA 516
Query: 89 CGGRGGGTRAGQGGRGAWGEAPVGSAALSSPTASP 123
GG GG G G +G AA ++ TA+P
Sbjct: 517 GGGNGG--GGGPGTAAGLDAGGLGPAASAASTAAP 549
Score = 30.8 bits (68), Expect = 3.1
Identities = 36/125 (28%), Positives = 47/125 (37%), Gaps = 6/125 (4%)
Query: 302 DGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDE-ALRTQPEPDDLGQHRCDSQ 360
DGA S P A P P + P +L A E A + PEP+ L + R +
Sbjct: 316 DGAESDASSCDPPPAREPPTSPGAAPSPLRLHRARAEEKSCAADSDPEPERLSEERAGAP 375
Query: 361 EQRGPRPPPAHGPLHPGGRPGTAQLRREP--GPEALRSRPRSPPAAHEALPRHRRGTARP 418
R P P A P P A+ RR P G E S P +L + R R
Sbjct: 376 LGRSPAPDSA-SPTRL-TEPERARERRSPERGKEPAES-GGDGPFGLRSLEKERAEARRK 432
Query: 419 DQSER 423
D+ +
Sbjct: 433 DEGRK 437
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 39.3 bits (90), Expect = 0.009
Identities = 76/349 (21%), Positives = 117/349 (33%), Gaps = 67/349 (19%)
Query: 5 GAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALAS 64
GA +G+G DG S +PAP +P LP +A P H PP LA
Sbjct: 34 GASGSSGSGSDGDSVPVSPQPAPP--SPPAAPCLPPLAHHP---HLPPHPPPPPPQHLA- 87
Query: 65 AGSRRCAPAA-------------LCSSGGC--------ALTRRAACGGRGGGTRAGQG-G 102
A + + PAA L GC L AA GG GGG R + G
Sbjct: 88 APAHQPQPAAQLHRTTNFFIDNILRPDFGCKKEQPPPQLLVAAAARGGAGGGGRVERDRG 147
Query: 103 RGAWGEAPVGSAALSSP-TASPGCSEEVH-GQRSSFRPGWSRVLAKEVGGELKPEAPSIG 160
+ A G PV +P AS C+ + + G +P + A + G A +
Sbjct: 148 QTAAGRDPVHPLGTRAPGAASLLCAPDANCGPPDGSQPAAAGAGASKAGNPAAAAAAAAA 207
Query: 161 AKSIEEGEEVLGAEDSVGQREGQGGWDDA-----------PAVL---------------H 194
A + D+ G G G PA+L
Sbjct: 208 AVAAAAAAAAAKPSDTGGGGSGGGAGSPGAQGTKYPEHGNPAILLMGSANGGPVVKTDSQ 267
Query: 195 HPCVWPPLHSCC--LTRPVYYPLTRVAAGAQGGAEEQHILGQRGVQKAHGAHPATRIHEH 252
P VWP C RP P TR + E+ ++ A A ++
Sbjct: 268 QPLVWPAWVYCTRYSDRPSSGPRTRKLKKKKNEKED---------KRPRTAFTAEQLQRL 318
Query: 253 PLQLLVGQHVAWVQPPQLHDQTREGQLVVQPWRRQRGGGVRAGTGPRSG 301
+ +++ + L + + ++ W + + ++ TG ++G
Sbjct: 319 KAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIKKATGIKNG 367
Score = 36.6 bits (83), Expect = 0.057
Identities = 34/111 (30%), Positives = 41/111 (36%), Gaps = 12/111 (10%)
Query: 4 GGAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALA 63
GGA G D + A R P L T PG A P SQ A A
Sbjct: 134 GGAGGGGRVERDRGQTAAGRDPVHPLG-----TRAPGAASLLCAPDANCGPPDGSQPAAA 188
Query: 64 SAGSRRCA-PAALCSSGGCALTRRAACGGR------GGGTRAGQGGRGAWG 107
AG+ + PAA ++ A+ AA GGG+ G G GA G
Sbjct: 189 GAGASKAGNPAAAAAAAAAAVAAAAAAAAAKPSDTGGGGSGGGAGSPGAQG 239
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 39.3 bits (90), Expect = 0.009
Identities = 36/130 (27%), Positives = 45/130 (34%), Gaps = 15/130 (11%)
Query: 287 QRGGGVRAGTGP-RSGDGAFGTLGSAPRPAAPLPALC-------------PLTSVLPRQL 332
Q+GGG G G R A GT A +P P LC P +P
Sbjct: 8 QQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPP 67
Query: 333 RYLFALEDEALRTQPEPDDLGQHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQLRREPGPE 392
P P G+ + Q RPP +H PL GG G + + P P
Sbjct: 68 AAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGM-GRGRPGKGPPPN 126
Query: 393 ALRSRPRSPP 402
R P +PP
Sbjct: 127 PSRRLPPAPP 136
Score = 37.0 bits (84), Expect = 0.044
Identities = 43/134 (32%), Positives = 52/134 (38%), Gaps = 16/134 (11%)
Query: 2 EGGGAEPGTGTGPDGQEAAESRRPAPSLRAPR----GRTHLPGVARCPWRLHGAAFAPPA 57
+GGG G G A +R PA R+PR PG A+ P GA +PPA
Sbjct: 9 QGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPA 68
Query: 58 SQAALASAGSRRCAPAALCSSGGCALTR-------RAACGGRGGGTRAGQGGRGAWGEAP 110
+ A A R PA G A TR R R R G GRG G+ P
Sbjct: 69 A-AHPARPALRGETPAP--GRRGRATTRGEVQPSVRPPLSHR--PLRGGGMGRGRPGKGP 123
Query: 111 VGSAALSSPTASPG 124
+ + P A PG
Sbjct: 124 PPNPSRRLPPAPPG 137
Score = 34.3 bits (77), Expect = 0.28
Identities = 39/118 (33%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 353 GQHRCDSQEQRGPRPP--PAHGPLHPGGRPGTAQLRREPGPEALRSRPRSPPAAHEALPR 410
G+HR S+ G R P PA P P P A R + A + P P AAH A P
Sbjct: 18 GRHRHSSRAP-GTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPA 76
Query: 411 HRRGTARPDQSERP---GHLGTALR--LNHFLGGSTEEWGGAAQGRQG-GGAKSPSGR 462
R T P + R G + ++R L+H GG +GR G G +PS R
Sbjct: 77 LRGETPAPGRRGRATTRGEVQPSVRPPLSH----RPLRGGGMGRGRPGKGPPPNPSRR 130
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 39.3 bits (90), Expect = 0.009
Identities = 51/223 (22%), Positives = 76/223 (34%), Gaps = 17/223 (7%)
Query: 281 VQPWRRQRGGGVRAGTGPRSGDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALED 340
+ P R + G PR+ A S+P P AP P P S + +
Sbjct: 1591 LSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPE 1650
Query: 341 EALRTQPEPDDLGQHRCDSQEQRG---PRPPPAHGPLHPGGRPGTAQLRREPGPEALRSR 397
+ T+ P+ + R + R P+ P R R+ RS
Sbjct: 1651 GSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSA 1710
Query: 398 PRSPPAAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEEWGGAAQGRQGGGAK 457
SP PRHRR + S P + R S R+G +
Sbjct: 1711 SSSPETRSRTPPRHRRSPS--VSSPEPAEKSRSSRRRR----SASSPRTKTTSRRG---R 1761
Query: 458 SPSGRCQGLQ-----ARSDLASATLHTDRCGDSETQNGRARPS 495
SPS + +GLQ +R + T DR G S++ + R + S
Sbjct: 1762 SPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRS 1804
Score = 36.2 bits (82), Expect = 0.075
Identities = 41/129 (31%), Positives = 53/129 (41%), Gaps = 23/129 (17%)
Query: 301 GDGAFGTLG--SAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQHRCD 358
GD F G S RP++P A +S P + + E A R P P+
Sbjct: 306 GDAPFSEPGTTSTQRPSSPETATKQPSS--PYEDKDKDKKEKSATRPSPSPE-------- 355
Query: 359 SQEQRGPRPPPAHGPL---HPGGRP---GTAQLRREP---GPEALRSRPRSPPAAHEALP 409
+ GP PP A PL GG P T L +EP EA +R RSPP + E LP
Sbjct: 356 -RSSTGPEPP-APTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLP 413
Query: 410 RHRRGTARP 418
+ + P
Sbjct: 414 QSSSSESSP 422
Score = 32.0 bits (71), Expect = 1.4
Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 26/167 (15%)
Query: 341 EALRTQPEPDDLGQHRCDSQEQRGPRPPP------AHGPLHPGGRPGTAQLRREPG--PE 392
E+ P+P + +H S E P P P + P G A+ + P
Sbjct: 419 ESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPS 478
Query: 393 ALRSRPRSPPAAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEEWGGAAQGRQ 452
R RSP A R R T R R + +W + ++
Sbjct: 479 RRMGRSRSPATAKRGRSRSRTPTKRGHSRSR-----------------SPQWRRSRSAQR 521
Query: 453 GGGAKSPSGRCQGLQARSDLASATLHTDRCGDSET-QNGRARPSSLA 498
G ++SP R + + S + +T R G S + + GR+ S A
Sbjct: 522 WGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPA 568
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 39.3 bits (90), Expect = 0.009
Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 25/128 (19%)
Query: 3 GGGAEPGTGTGPDG---------------QEAAESRRPAPSLRAPRGRTHLPGVARCPWR 47
GGGA G+GP + ++ S P+PS A G PG A
Sbjct: 246 GGGAGGSGGSGPSAILRLPSYRFRYRRRSRSSSRSSEPSPSRDASPGGPGGPGFASTDIS 305
Query: 48 LHGAAFAPPASQAALASAGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWG 107
++ + P A AG+ A+ + GG A GG GGG G GG GA
Sbjct: 306 MYTLSRDPSKGSVAAGLAGAGGGGGGAVGAFGG-------AAGGAGGG---GGGGGGAGA 355
Query: 108 EAPVGSAA 115
E G A+
Sbjct: 356 ERDRGGAS 363
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 38.9 bits (89), Expect = 0.012
Identities = 55/221 (24%), Positives = 82/221 (37%), Gaps = 36/221 (16%)
Query: 300 SGDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPDDLGQ--HRC 357
+G G TL S P P PAL L+ LP Q R + A +A P LG+ R
Sbjct: 52 AGRGPCATLRS--HPITPAPALLLLSHSLPAQRRSMQATVAKA--GSPGRGRLGKEPRRR 107
Query: 358 DSQEQRGPRPPPAHGP---------LHPGGRPGTAQLRREPGPEALRSR------PRSPP 402
+S + PR P P R G + R G +A +SR PR
Sbjct: 108 ESWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKPRRRGQKAAKSRGGGGKKPRGQK 167
Query: 403 AAHEALPRHRRGTARPDQSERPGHLGTALRLNHFLGGSTEEWGGAAQGRQGGGAKSPSGR 462
AA +HR+ R +++ GG + AA+ R GGG K+ +
Sbjct: 168 AAGAGAKKHRKPRRRGERAAA-------------AGGKKLQKAAAAKSRGGGGKKTAA-- 212
Query: 463 CQGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADE 503
G + R + GD + + +A + + D+
Sbjct: 213 AGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDK 253
Score = 34.3 bits (77), Expect = 0.28
Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 16 GQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALASAGSRRCAPAAL 75
GQ+AA+SR + PRG+ A+ + P A+AG ++ AA
Sbjct: 149 GQKAAKSRGGGG--KKPRGQKAAGAGAKKHRK-------PRRRGERAAAAGGKKLQKAAA 199
Query: 76 CSSGGCALTRRAACGGRGGGTRAGQ---GGRGAWGEAPVGSAALSSPTASPGCSEEVHGQ 132
S G + AA GG+ R GQ RG + A + S G + + G
Sbjct: 200 AKSRGGGGKKTAAAGGKKPRRRRGQKAAKSRGGGDKKLERQKAALTGVKSRGDKKPLRGG 259
Query: 133 RSSFRPGWSRVLAKEVGGELKPEAPSIGAKSI-EEGEEVLGAEDSVGQ 179
+ G ++ GGE +A + GAKS GE+ AE GQ
Sbjct: 260 KKQRERG-QNTKSRGGGGEKPQKAAAAGAKSRGGRGEKPQKAEAGQGQ 306
>gi|4758156 diacylglycerol kinase, iota [Homo sapiens]
Length = 1065
Score = 38.9 bits (89), Expect = 0.012
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 18/107 (16%)
Query: 25 PAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALASAGSRRCAPAALCSSGGCALT 84
P P+ R P AR P AA +PP + A A S A+ S
Sbjct: 12 PLPAARGP---------ARAPAAAAAAAASPPGPCSGAACAPSAAAGAGAMNPSSSAGEE 62
Query: 85 RRAACGGRGGGTRAG------QGG---RGAWGEAPVGSAALSSPTAS 122
+ A G G+ AG +GG RGA A G+AAL P A+
Sbjct: 63 KGATGGSSSSGSGAGSCCLGAEGGADPRGAGSAAAAGAAALDEPAAA 109
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 38.5 bits (88), Expect = 0.015
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 17/171 (9%)
Query: 340 DEALRTQPEPDDLGQHRCDSQEQRGPRPPPAHGPLHPGGRPGTAQLRREPGPEALRSRPR 399
+E P P G HR + ++ + P+ PA G G R G+ R P + R++ R
Sbjct: 192 EEEAAAAPAPTSRG-HRTEKRKPQQPQCRPAGGT---GQRRGS---RSSPSADQQRAQDR 244
Query: 400 SPPAAHEALPR---HRRGTARPDQSERPGHLGTALRLNHFLGGSTEEWGGAAQGRQGGGA 456
AA P HR +P Q +R GT R S ++ G + + A
Sbjct: 245 EEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSGYSPSADQQGAQDREEEAAAA 304
Query: 457 KSPSGRCQGLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEPGSE 507
+P+ + R L L G + G+ R S + A++ G++
Sbjct: 305 PAPTSSGHRTEKRKRL---QLQCQPAGGT----GQRRGSGCSSSANQQGAQ 348
>gi|154759257 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo
sapiens]
Length = 666
Score = 38.5 bits (88), Expect = 0.015
Identities = 37/131 (28%), Positives = 48/131 (36%), Gaps = 4/131 (3%)
Query: 5 GAEPGTGTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALAS 64
G + GP+G EA R L + R R P + AA PA++
Sbjct: 11 GPDAAAAAGPEGAEAGAHGRARALLERLQSRARERQQQREPAQTEAAASTEPATRRRRRP 70
Query: 65 AGSRRCAPAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPTASPG 124
RR A S RR A G G + A GE GS+ + S G
Sbjct: 71 RRRRRVNDAEPGSPEAPQGKRRKADGEDAGA----ESNEEAPGEPSAGSSEEAPGEPSAG 126
Query: 125 CSEEVHGQRSS 135
SEE G+RS+
Sbjct: 127 SSEEAPGERST 137
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 38.1 bits (87), Expect = 0.020
Identities = 51/175 (29%), Positives = 61/175 (34%), Gaps = 26/175 (14%)
Query: 22 SRRPAPSLRAPRGRTHLPGVARCPWRL--HGAAFAPPASQAALASAGSRRCAPAALCSSG 79
SR P P+ P R G R P G + PP S RR P
Sbjct: 178 SRPPHPAPTRPTPRVQ-GGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRS 236
Query: 80 GCALTRRAACGGR--GGGTRAGQGGRGAWGEAPVGSAALSSPTASPGCSEEVHGQRSSFR 137
G R+ GR AG GG G W A G A SS AS EE R
Sbjct: 237 G-----RSRGSGRPPDSAGAAGTGGSG-WAAALRGWPAPSSFAASSALPEECLPPRRGC- 289
Query: 138 PGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQREGQGGWDDAPAV 192
GW+ +L +E GG + G LG E G+ EG+ D A+
Sbjct: 290 -GWAELLEREAGGS-------------DTGHLPLGNEGGRGEGEGEASEDRVAAM 330
Score = 31.2 bits (69), Expect = 2.4
Identities = 38/121 (31%), Positives = 46/121 (38%), Gaps = 19/121 (15%)
Query: 338 LEDEALRTQPEPDDLGQHRCDSQEQRGP-RPPPAHGPLHPGGRPGTAQLRREPGPEALRS 396
L+D R +P P G S RG RPP + G GG A LR P P + +
Sbjct: 218 LQDSGPRRRPGP---GPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAA 274
Query: 397 RPRSPPAAHEALPRHRRGTARPDQSER------PGHLGTALRLNHFLGGSTEEWGGAAQG 450
P E LP RRG + ER GHL GG E G A++
Sbjct: 275 SSALP---EECLP-PRRGCGWAELLEREAGGSDTGHLPLGNE-----GGRGEGEGEASED 325
Query: 451 R 451
R
Sbjct: 326 R 326
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 38.1 bits (87), Expect = 0.020
Identities = 51/175 (29%), Positives = 61/175 (34%), Gaps = 26/175 (14%)
Query: 22 SRRPAPSLRAPRGRTHLPGVARCPWRL--HGAAFAPPASQAALASAGSRRCAPAALCSSG 79
SR P P+ P R G R P G + PP S RR P
Sbjct: 178 SRPPHPAPTRPTPRVQ-GGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRS 236
Query: 80 GCALTRRAACGGR--GGGTRAGQGGRGAWGEAPVGSAALSSPTASPGCSEEVHGQRSSFR 137
G R+ GR AG GG G W A G A SS AS EE R
Sbjct: 237 G-----RSRGSGRPPDSAGAAGTGGSG-WAAALRGWPAPSSFAASSALPEECLPPRRGC- 289
Query: 138 PGWSRVLAKEVGGELKPEAPSIGAKSIEEGEEVLGAEDSVGQREGQGGWDDAPAV 192
GW+ +L +E GG + G LG E G+ EG+ D A+
Sbjct: 290 -GWAELLEREAGGS-------------DTGHLPLGNEGGRGEGEGEASEDRVAAM 330
Score = 31.2 bits (69), Expect = 2.4
Identities = 38/121 (31%), Positives = 46/121 (38%), Gaps = 19/121 (15%)
Query: 338 LEDEALRTQPEPDDLGQHRCDSQEQRGP-RPPPAHGPLHPGGRPGTAQLRREPGPEALRS 396
L+D R +P P G S RG RPP + G GG A LR P P + +
Sbjct: 218 LQDSGPRRRPGP---GPPALRSGRSRGSGRPPDSAGAAGTGGSGWAAALRGWPAPSSFAA 274
Query: 397 RPRSPPAAHEALPRHRRGTARPDQSER------PGHLGTALRLNHFLGGSTEEWGGAAQG 450
P E LP RRG + ER GHL GG E G A++
Sbjct: 275 SSALP---EECLP-PRRGCGWAELLEREAGGSDTGHLPLGNE-----GGRGEGEGEASED 325
Query: 451 R 451
R
Sbjct: 326 R 326
>gi|239745938 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 38.1 bits (87), Expect = 0.020
Identities = 50/156 (32%), Positives = 57/156 (36%), Gaps = 15/156 (9%)
Query: 11 GTGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALA---SAGS 67
G G GQ AA + S P GR L R P A APP + +A A
Sbjct: 143 GRGGPGQVAAAAAAAPASSPLPPGRWCLGDQRRLP----PATAAPPWASSATAWRLPQPR 198
Query: 68 RRCAPAALCSSGGCALTRRAA--CGGRGGGTRAGQG-GRGAWGEAPVGSAALSSPTASPG 124
RR P C S L+ GG GGG AG G G GA A + L P
Sbjct: 199 RRRRPTCPCCSRCRELSPPMGPDLGGGGGGAGAGAGAGAGAQRSAAEAAGCLGCLPRLPL 258
Query: 125 CSEEVHGQRSSFR----PGWSRVLAKEVGGELKPEA 156
SE G++ R GW L GG EA
Sbjct: 259 MSEPRTGEKGKRRRRDGRGWGG-LRGRAGGPRSAEA 293
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 38.1 bits (87), Expect = 0.020
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 12 TGPDGQEAAESRRPAPSLRAPRGRTHLPGVARCPWRLHGAAFAPPASQAALASAGSRRCA 71
+ P G E++ + P PG+ ++ PA+ AA A+A + A
Sbjct: 417 SSPQGSESSPAASSGYESSTP------PGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAA 470
Query: 72 PAALCSSGGCALTRRAACGGRGGGTRAGQGGRGAWGEAPVGSAALSSPTA 121
+A+ GG A GG GGG+ +G GG GA G GS+ S TA
Sbjct: 471 VSAVHRGGGSG--SGGAGGGSGGGSGSGGGGGGAGGGGG-GSSGGGSGTA 517
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 38.1 bits (87), Expect = 0.020
Identities = 59/221 (26%), Positives = 73/221 (33%), Gaps = 21/221 (9%)
Query: 291 GVRAGTGPRSGDGAFGTLGSAPRPAAPLPALCPLTSVLPRQLRYLFALEDEALRTQPEPD 350
G+R GP G G G P P P + E ++ T P P
Sbjct: 764 GIRGPPGPSGDPGKPGLTGPQGPQGLPGTPGRPGIKGEPGAPGKIVTSEGSSMLTVPGPP 823
Query: 351 DLGQHRCDSQEQRGPRPPPAHGPLHPGGRPG---TAQLRREPGPEALRSRPRSPPAAHEA 407
P PP A GP P G PG L+ PGP PR PP
Sbjct: 824 G------PPGAMGPPGPPGAPGPAGPAGLPGHQEVLNLQGPPGPPG----PRGPPGPSIP 873
Query: 408 LPRHRRGTARPDQSERPGHLGTALRLNH-FLGGSTEEWG-GAAQGRQG-GGAKSPSGRCQ 464
P RG PG G+ L + FL G G +G QG G + G Q
Sbjct: 874 GPPGPRGPPGEGLPGPPGPPGSFLSNSETFLSGPPGPPGPPGPKGDQGPPGPRGHQGE-Q 932
Query: 465 GLQARSDLASATLHTDRCGDSETQNGRARPSSLAGEADEPG 505
GL S S++ + G G P G+ +PG
Sbjct: 933 GLPGFSTSGSSSFGLNLQGPP----GPPGPQGPKGDKGDPG 969
Score = 29.6 bits (65), Expect = 7.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Query: 90 GGRGGGTRAGQGGRGAWGEAP 110
GG GGG G G G WG AP
Sbjct: 433 GGSGGGGGVGGAGGGPWGPAP 453
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,790,066
Number of Sequences: 37866
Number of extensions: 1768749
Number of successful extensions: 11792
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 720
Number of HSP's that attempted gapping in prelim test: 9192
Number of HSP's gapped (non-prelim): 3150
length of query: 522
length of database: 18,247,518
effective HSP length: 107
effective length of query: 415
effective length of database: 14,195,856
effective search space: 5891280240
effective search space used: 5891280240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.