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Search of human proteins with 239742740
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
sapiens]
(159 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo ... 315 1e-86
gi|239753176 PREDICTED: similar to zinc finger protein 607 [Homo... 201 3e-52
gi|239747750 PREDICTED: hypothetical protein XP_002348259 [Homo ... 201 3e-52
gi|239741616 PREDICTED: hypothetical protein XP_002342249 [Homo ... 201 3e-52
gi|110832843 TBP-associated factor 4 [Homo sapiens] 48 4e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 3e-05
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 45 3e-05
gi|39812378 RAN binding protein 9 [Homo sapiens] 44 6e-05
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 44 8e-05
gi|160707881 formin 2 [Homo sapiens] 43 1e-04
gi|154146199 sal-like 3 [Homo sapiens] 43 1e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 42 3e-04
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 41 4e-04
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 41 5e-04
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 41 5e-04
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 41 5e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 6e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 6e-04
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 40 6e-04
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 40 6e-04
gi|209862789 microtubule associated monoxygenase, calponin and L... 40 6e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 40 8e-04
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 40 8e-04
gi|68800350 interleukin-1 receptor-associated kinase 1 isoform 3... 40 0.001
gi|68800343 interleukin-1 receptor-associated kinase 1 isoform 2... 40 0.001
gi|68800243 interleukin-1 receptor-associated kinase 1 isoform 1... 40 0.001
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 40 0.001
>gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
sapiens]
Length = 159
Score = 315 bits (807), Expect = 1e-86
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MLLPVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPR 60
MLLPVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPR
Sbjct: 1 MLLPVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPR 60
Query: 61 LAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLP 120
LAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLP
Sbjct: 61 LAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLP 120
Query: 121 PPTSLPAALDPAPSRPASGALRSGRTRARSKMRTKPAQV 159
PPTSLPAALDPAPSRPASGALRSGRTRARSKMRTKPAQV
Sbjct: 121 PPTSLPAALDPAPSRPASGALRSGRTRARSKMRTKPAQV 159
>gi|239753176 PREDICTED: similar to zinc finger protein 607 [Homo
sapiens]
Length = 197
Score = 201 bits (510), Expect = 3e-52
Identities = 104/128 (81%), Positives = 111/128 (86%)
Query: 1 MLLPVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPR 60
+L+ +RVRVTVA GPAAPLALV AR VTE+VARRIVSSVRPPGRAP PGTL LLGKG
Sbjct: 63 ILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGWSW 122
Query: 61 LAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLP 120
LAQHPAA+RSHGSRLP TSGSPE+GVS HG AAAASLPRAQVPTPPPSHAQPQPLQRT
Sbjct: 123 LAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRTPQ 182
Query: 121 PPTSLPAA 128
P+S P A
Sbjct: 183 SPSSSPPA 190
>gi|239747750 PREDICTED: hypothetical protein XP_002348259 [Homo
sapiens]
Length = 197
Score = 201 bits (510), Expect = 3e-52
Identities = 104/128 (81%), Positives = 111/128 (86%)
Query: 1 MLLPVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPR 60
+L+ +RVRVTVA GPAAPLALV AR VTE+VARRIVSSVRPPGRAP PGTL LLGKG
Sbjct: 63 ILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGWSW 122
Query: 61 LAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLP 120
LAQHPAA+RSHGSRLP TSGSPE+GVS HG AAAASLPRAQVPTPPPSHAQPQPLQRT
Sbjct: 123 LAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRTPQ 182
Query: 121 PPTSLPAA 128
P+S P A
Sbjct: 183 SPSSSPPA 190
>gi|239741616 PREDICTED: hypothetical protein XP_002342249 [Homo
sapiens]
Length = 197
Score = 201 bits (510), Expect = 3e-52
Identities = 104/128 (81%), Positives = 111/128 (86%)
Query: 1 MLLPVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPR 60
+L+ +RVRVTVA GPAAPLALV AR VTE+VARRIVSSVRPPGRAP PGTL LLGKG
Sbjct: 63 ILVRLRVRVTVAEGPAAPLALVAARTVTESVARRIVSSVRPPGRAPRPGTLRLLGKGWSW 122
Query: 61 LAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLP 120
LAQHPAA+RSHGSRLP TSGSPE+GVS HG AAAASLPRAQVPTPPPSHAQPQPLQRT
Sbjct: 123 LAQHPAAQRSHGSRLPETSGSPEKGVSRHGSAAAASLPRAQVPTPPPSHAQPQPLQRTPQ 182
Query: 121 PPTSLPAA 128
P+S P A
Sbjct: 183 SPSSSPPA 190
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 47.8 bits (112), Expect = 4e-06
Identities = 50/156 (32%), Positives = 58/156 (37%), Gaps = 28/156 (17%)
Query: 4 PVRVRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRP-PGRAPGPGTLFLLGKGSPRLA 62
PV VAAGP A A A+A R P PG PGPG G G+ +
Sbjct: 139 PVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTL 198
Query: 63 QHPAAR-RSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVP-----TPP-------PSH 109
AA SH + P S + +GPAA LP+ P TPP P+
Sbjct: 199 NGSAALLNSHHAAAPAVS------LVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAP 252
Query: 110 AQPQPLQRTLP--------PPTSLPAALDPAPSRPA 137
A P P P PP PA L P PA
Sbjct: 253 AAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPA 288
Score = 34.7 bits (78), Expect = 0.035
Identities = 26/65 (40%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 79 SGSPEEGVSGHGPAAAASLPRAQVPTPPP-SHAQPQPLQRTLPPPTSLPAALDPAPSRPA 137
SGSP G +G GPAA A P PPP A+P P P S L PA P
Sbjct: 64 SGSPA-GAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPP 122
Query: 138 SGALR 142
+ LR
Sbjct: 123 AAKLR 127
Score = 32.7 bits (73), Expect = 0.13
Identities = 36/132 (27%), Positives = 48/132 (36%), Gaps = 16/132 (12%)
Query: 12 AAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSH 71
AA P AP A A A + PP P P TL R HPA +
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAP-----AAAPPPPPPAPATL-------ARPPGHPAGPPTA 293
Query: 72 GSRLPRTSGSPEEGVSGHGPAAAASLPR----AQVPTPPPSHAQPQPLQRTLPPPTSLPA 127
+P + + G +G PA A + + P P + A P P + P + A
Sbjct: 294 APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQA 353
Query: 128 ALDPAPSRPASG 139
A A + ASG
Sbjct: 354 APPAAQTLAASG 365
Score = 28.9 bits (63), Expect = 1.9
Identities = 37/146 (25%), Positives = 46/146 (31%), Gaps = 26/146 (17%)
Query: 15 PAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSR 74
PAAP ++ A A ++ PP AP P PAA
Sbjct: 231 PAAPGTVIQTPPFVGAAAPPAPAAPSPPA-APAPAA--------------PAAAPPPPPP 275
Query: 75 LPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSL---PAALDP 131
P T P P A P A PPP+ AQ P P PA +
Sbjct: 276 APATLARP--------PGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSG 327
Query: 132 APSRPASGALRSGRTRARSKMRTKPA 157
P A+ A + +A S R A
Sbjct: 328 QPGPGAAAAAPAPGVKAESPKRVVQA 353
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 44.7 bits (104), Expect = 3e-05
Identities = 41/141 (29%), Positives = 55/141 (39%), Gaps = 19/141 (13%)
Query: 10 TVAAGPAAPLALVTARAVTEAVARRIVSSVRP---PGRAPGPGTLFLLGKGSPRLAQHPA 66
T PAA + +R + SS P P R+ GP +G+PR HP+
Sbjct: 217 TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS-GPSA-----RGTPRAPAHPS 270
Query: 67 ARRSHGSRL--------PRTSGSPEEGVSGHGPAAAASLPRAQV-PTPPPSHAQPQPLQR 117
+ G + PR +P G P A S + P PPP +A PL
Sbjct: 271 QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAAT-PLPA 329
Query: 118 TLPPPTSLPAALDPAPSRPAS 138
TLPP L L AP P++
Sbjct: 330 TLPPSPPLATPLPLAPPSPSA 350
Score = 34.7 bits (78), Expect = 0.035
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Query: 38 SVRPPGRAPGP-GTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAAS 96
S PP +AP P L SP + + + R+P +P V PA+
Sbjct: 719 SATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPM 778
Query: 97 LPRAQVPTPPPSHAQPQPLQRTLPPPTSLP--AALDPAPSRPAS 138
P A+ P P PLQ PP S P A P+ S P S
Sbjct: 779 SPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMS 822
Score = 32.7 bits (73), Expect = 0.13
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Query: 12 AAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSH 71
A+ P +PLA + +A + + PP P SP + + +
Sbjct: 638 ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF------SPPASPPVSPSATP 691
Query: 72 GSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQP---QPLQRTLPPPTSLPAA 128
S+ P + +P V P+ AS P + TPPP P PLQ PP S P +
Sbjct: 692 PSQAPPSLAAPPLQVP---PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMS 748
Query: 129 LDPAP 133
P
Sbjct: 749 PSATP 753
Score = 32.3 bits (72), Expect = 0.18
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Query: 75 LPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPS 134
LP + P + S P L P P P A P PL T PPP + + P P
Sbjct: 538 LPSLAPPPLQTASA--PLTTPHLETPPCPAPCPLQAPPSPL--TTPPPETPSSIATPPPQ 593
Query: 135 RP---ASGALRSGRTRARSKMRTKPAQ 158
P AS L+ + S + T P Q
Sbjct: 594 APPALASPPLQGLPSPPLSPLATPPPQ 620
Score = 32.3 bits (72), Expect = 0.18
Identities = 38/135 (28%), Positives = 49/135 (36%), Gaps = 22/135 (16%)
Query: 12 AAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSH 71
A+ P +P A R A + PP P + L K P+ PA
Sbjct: 743 ASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLP----MSPLAKPPPQAP--PALATPP 796
Query: 72 GSRLPRTSGSPEEGVSGHGP-AAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALD 130
LP SP G P + +ASLP + + TPPP PP L
Sbjct: 797 LQALP----SPPASFPGQAPFSPSASLPMSPLATPPPQ-----------APPVLAAPLLQ 841
Query: 131 PAPSRPASGALRSGR 145
PS PAS L++ R
Sbjct: 842 VPPSPPASPTLQAPR 856
Score = 31.6 bits (70), Expect = 0.30
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 38/151 (25%)
Query: 39 VRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPR---------------TSGSPE 83
V PGRA G LG+ R++ R + P+ T G+P
Sbjct: 114 VSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPS 173
Query: 84 EGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAA-----LDPAPS---- 134
++ AA + +P P PS A+P+P T P S+ +A +P+P+
Sbjct: 174 PAMARRSRAAGTEV---GLPRPAPS-ARPRP--PTEGPRKSVSSASEHSTTEPSPAARRR 227
Query: 135 --------RPASGALRSGRTRARSKMRTKPA 157
RPAS +L S T S R+ P+
Sbjct: 228 PSAGGGLQRPASRSLSSSATPLSSPARSGPS 258
Score = 31.2 bits (69), Expect = 0.39
Identities = 40/140 (28%), Positives = 51/140 (36%), Gaps = 32/140 (22%)
Query: 41 PPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVS------------- 87
PP R+P TL P LA H ++ S L PE G +
Sbjct: 883 PPSRSPS-STL-----SGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH 936
Query: 88 ----GHGPA---AAASLPRAQVPTPP---PSHAQPQ-PLQRTLPPPTSLPA--ALDPAPS 134
GPA A P A +P PP P A + T P ++ PA ALDP PS
Sbjct: 937 PAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPS 996
Query: 135 RPASGALRSGRTRARSKMRT 154
SG + A + R+
Sbjct: 997 PGTSGGKAAAGAGAGASSRS 1016
Score = 29.6 bits (65), Expect = 1.1
Identities = 37/145 (25%), Positives = 49/145 (33%), Gaps = 17/145 (11%)
Query: 24 ARAVTEAVARRIVSSVRPPG--RAPGPGT---LFLLGKGSPRLAQHPAARRSHG------ 72
A A T A + + RPPG R P P T L +LG + + P A R+ G
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGA-VGRKPLAERAGGIGGATI 70
Query: 73 -SRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDP 131
PR + G S PA+ PP + P P+ P P
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVS----SPGRASGTTRP 126
Query: 132 APSRPASGALRSGRTRARSKMRTKP 156
P + + T AR K P
Sbjct: 127 GPLGQKGLRISAEETVARGKATEAP 151
Score = 29.6 bits (65), Expect = 1.1
Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 16/82 (19%)
Query: 76 PRTSGSPEEGVS-----GHGPAAAASLPRAQVPTPP-------PSHAQPQ----PLQRTL 119
P T+ PE S P A AS P +P+PP P A P PLQ
Sbjct: 575 PLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPP 634
Query: 120 PPPTSLPAALDPAPSRPASGAL 141
PP S P + PS A AL
Sbjct: 635 SPPASPPLSPLATPSPQAPNAL 656
Score = 29.6 bits (65), Expect = 1.1
Identities = 32/128 (25%), Positives = 41/128 (32%), Gaps = 16/128 (12%)
Query: 15 PAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSR 74
P +PLA +A + + PP P SP P A +
Sbjct: 610 PLSPLATPPPQAPPXLALPPLQAPPSPPASPPL----------SPLATPSPQAPNALAVH 659
Query: 75 LPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQ----PLQRTLPPPTSLP--AA 128
L + SP P + + P PPS A P PLQ PP S P +
Sbjct: 660 LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS 719
Query: 129 LDPAPSRP 136
P P P
Sbjct: 720 ATPPPQAP 727
Score = 28.9 bits (63), Expect = 1.9
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 10/86 (11%)
Query: 81 SPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDP----APSRP 136
SP P + A+ P QVP PP A P PPP + P P PS P
Sbjct: 686 SPSATPPSQAPPSLAA-PPLQVPPSPP--ASPPMSPSATPPPQAPPPLAAPPLQVPPSPP 742
Query: 137 ASGALRSGRT---RARSKMRTKPAQV 159
AS + T R + P QV
Sbjct: 743 ASPPMSPSATPPPRVPPLLAAPPLQV 768
Score = 28.5 bits (62), Expect = 2.5
Identities = 33/127 (25%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 12 AAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSH 71
A+ P +P A ++A A + PP P SP P A
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM----------SPSATPPPQA---- 726
Query: 72 GSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAA--L 129
P +P V PA+ P A P P PLQ PP SLP +
Sbjct: 727 ----PPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLA 782
Query: 130 DPAPSRP 136
P P P
Sbjct: 783 KPPPQAP 789
Score = 27.7 bits (60), Expect = 4.3
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 58 SPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQR 117
+P L P+ S + PR +P S GP +L A P PPPS + L
Sbjct: 837 APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLAL--APGPPPPPSRSPSSTLSG 894
Query: 118 T-----LPPPTSLPAALDPAPSRPASGALRS 143
TS P L S P GA S
Sbjct: 895 PDLAGHSSSATSTPEELRGYDSGPEGGAAAS 925
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 44.7 bits (104), Expect = 3e-05
Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
Query: 42 PGRAPGPGTLFLLGKGSP-RLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRA 100
PG+ PGPG++ + G+ P R+ AA P G P + GP + P
Sbjct: 1014 PGQIPGPGSM-MPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNG 1072
Query: 101 QVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGA 140
P PP P P +PPP PAP PAS A
Sbjct: 1073 MYPPPPQQQPPPPPPADGVPPP--------PAPGPPASAA 1104
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 43.9 bits (102), Expect = 6e-05
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 79 SGSPEEGVSGHG-PAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSL--PAALDPAPSR 135
+GSP G G G AAAA+L P PPP+ A P P PPP S PA+ PAP
Sbjct: 48 AGSPGGGAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPG 107
Query: 136 PASG 139
A+G
Sbjct: 108 LAAG 111
Score = 30.0 bits (66), Expect = 0.87
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 101 QVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPS--RPASGALRSGRTRARS 150
Q P PPP Q Q Q+ PPP PAAL P PA A+ +G + A S
Sbjct: 4 QPPPPPPQQQQQQ--QQLSPPP---PAALAPVSGVVLPAPPAVSAGSSPAGS 50
Score = 29.6 bits (65), Expect = 1.1
Identities = 31/139 (22%), Positives = 44/139 (31%), Gaps = 7/139 (5%)
Query: 15 PAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSR 74
P P AL V + + P G G LG + L HP +
Sbjct: 21 PPPPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAAAAALLLHPPPPPPPATA 80
Query: 75 LPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPS 134
P P P A+A+ P + P PP A P P P P + + AP
Sbjct: 81 APPPPPPPPP------PPASAAAPASGPPAPPGLAAGPGPAGGA-PTPALVAGSSAAAPF 133
Query: 135 RPASGALRSGRTRARSKMR 153
AL + +++
Sbjct: 134 PHGDSALNEQEKELQRRLK 152
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 43.5 bits (101), Expect = 8e-05
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 21/141 (14%)
Query: 10 TVAAGPAAPLALVTARA-----VTEAVARRIVSSVRPPGRAPGP----------GTLFLL 54
T A PA+PLA V+A A V + + ++S P AP P ++ +L
Sbjct: 1797 TSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTIL 1856
Query: 55 GKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQP 114
S + A S + P S ++ P AS P A VP P S + P P
Sbjct: 1857 ASASIPILASALASTSAPTPAPAASSPAAPVITA--PTIPASAPTASVPLAPASASAPAP 1914
Query: 115 LQRTLPPPTSLPAALDPAPSR 135
P P S P PAP++
Sbjct: 1915 ----APTPVSAPNPAPPAPAQ 1931
Score = 28.1 bits (61), Expect = 3.3
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 56 KGSPRLAQHP---AARRSHGSRLPRTSGS-PEEGVSGHGPAAAASLPRAQVPTPPPSHAQ 111
KG + ++ P A +++ G + ++S S P + P+ +AS+P A P P+
Sbjct: 1717 KGRSQTSKLPPRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASVP-ASTSAPLPATLT 1775
Query: 112 PQPLQRTLPPPTS-----LPAALDPAPSRPASGALRSGRTRARSKMRTKPAQV 159
P P + P P S L + P P+ P + S A T A +
Sbjct: 1776 PVPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAI 1828
Score = 26.6 bits (57), Expect = 9.6
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 99 RAQVPTPPPSHAQPQPLQ-RTLPPPTSLPAALDPA 132
+ +P PPP P P+Q +++PPP A P+
Sbjct: 1055 KKDLPPPPPPPQPPAPIQPQSVPPPIQPEAEKFPS 1089
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 43.1 bits (100), Expect = 1e-04
Identities = 37/112 (33%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Query: 37 SSVRPPGRAPGPGTLF---LLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAA 93
+ + PP PG G L G G P P A LP P + G G
Sbjct: 1061 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPP 1120
Query: 94 AASLPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AALDPAPSRPASG 139
LP A +P PPP P PL R +PPP LP A + P P P +G
Sbjct: 1121 PPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAG 1172
Score = 42.0 bits (97), Expect = 2e-04
Identities = 37/110 (33%), Positives = 42/110 (38%), Gaps = 9/110 (8%)
Query: 39 VRPPGRAPGPGTLF---LLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAA 95
+ PP PG G L G G P P A LPR P + G G
Sbjct: 1107 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPP 1166
Query: 96 SLPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AALDPAPSRPASG 139
LP A +P PPP P PL +PPP LP A + P P P G
Sbjct: 1167 PLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMG 1216
Score = 40.4 bits (93), Expect = 6e-04
Identities = 36/112 (32%), Positives = 43/112 (38%), Gaps = 9/112 (8%)
Query: 37 SSVRPPGRAPG---PGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAA 93
+ + PP PG P L G G P P A LP P + G G
Sbjct: 940 AGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 999
Query: 94 AASLPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AALDPAPSRPASG 139
LP A +P PPP P PL +PPP LP A + P P P +G
Sbjct: 1000 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1051
Score = 40.4 bits (93), Expect = 6e-04
Identities = 36/112 (32%), Positives = 43/112 (38%), Gaps = 9/112 (8%)
Query: 37 SSVRPPGRAPGPGTLF---LLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAA 93
+ + PP PG G L G G P P A LP P + G G
Sbjct: 973 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1032
Query: 94 AASLPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AALDPAPSRPASG 139
LP A +P PPP P PL +PPP LP A + P P P +G
Sbjct: 1033 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1084
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/109 (33%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 37 SSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAAS 96
+ + PP PG G L L P L P A LP + P + G G
Sbjct: 918 AGIPPPPPLPGAGILPL-----PPL---PGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPP 969
Query: 97 LPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AALDPAPSRPASG 139
LP A +P PPP P PL +PPP LP A + P P P +G
Sbjct: 970 LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 1018
Score = 38.9 bits (89), Expect = 0.002
Identities = 35/112 (31%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 37 SSVRPPGRAPGPGTLF---LLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAA 93
+ + PP PG G L G G P P A LP P + G G
Sbjct: 1006 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1065
Query: 94 AASLPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AALDPAPSRPASG 139
LP A +P PPP P PL +PPP LP + P P P +G
Sbjct: 1066 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAG 1117
Score = 38.5 bits (88), Expect = 0.002
Identities = 35/112 (31%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 37 SSVRPPGRAPGPGTLF---LLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAA 93
+ + PP PG G L G G P P A LP P + G G
Sbjct: 1083 AGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1142
Query: 94 AASLPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AALDPAPSRPASG 139
LPR +P PPP P PL +PPP LP + P P P G
Sbjct: 1143 PPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVG 1194
Score = 37.7 bits (86), Expect = 0.004
Identities = 29/72 (40%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 75 LPRTSGSPEEGVSGHGPAAAASLPRAQVPT-PPPSHAQPQPLQRTL---PPPTSLPAA-L 129
LP T S G P LP VPT P + QP PLQ T PPP LP A +
Sbjct: 861 LPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGI 920
Query: 130 DPAPSRPASGAL 141
P P P +G L
Sbjct: 921 PPPPPLPGAGIL 932
Score = 37.4 bits (85), Expect = 0.005
Identities = 35/112 (31%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 37 SSVRPPGRAPGPGTLF---LLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAA 93
+ + PP PG G L G G P P A LP P + G G
Sbjct: 1039 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1098
Query: 94 AASLPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AALDPAPSRPASG 139
LP +P PPP P PL +PPP LP A + P P P G
Sbjct: 1099 PPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVG 1150
Score = 32.3 bits (72), Expect = 0.18
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 75 LPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPP----SHAQPQPLQRT-LPPPTSLP-AA 128
LP P + G G LP A +P PPP + P PL +P P LP A
Sbjct: 915 LPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAG 974
Query: 129 LDPAPSRPASG 139
+ P P P +G
Sbjct: 975 IPPPPPLPGAG 985
Score = 31.2 bits (69), Expect = 0.39
Identities = 30/104 (28%), Positives = 37/104 (35%), Gaps = 10/104 (9%)
Query: 37 SSVRPPGRAPGPGTLF---LLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAA 93
+ + PP PG G L G P P A LP P + G G
Sbjct: 1127 AGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP 1186
Query: 94 AASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPA-ALDPAPSRP 136
LP +P PPP +PPP LP + PAP+ P
Sbjct: 1187 PPPLPGVGIPPPPPLPG------AGIPPPPPLPGMGIPPAPAPP 1224
Score = 26.9 bits (58), Expect = 7.4
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 8/52 (15%)
Query: 96 SLPRAQVPTPPPSHAQ--------PQPLQRTLPPPTSLPAALDPAPSRPASG 139
+LP +P PPP P P PPP A + P P P +G
Sbjct: 890 TLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAG 941
Score = 26.6 bits (57), Expect = 9.6
Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 34/106 (32%)
Query: 77 RTSGSPEEGVSGHGPAAAASLPRAQVP-----------TP-----------PPSHAQPQ- 113
R PEE G AAASLP + P TP P+H+ Q
Sbjct: 377 RLGEEPEEEAQGPDAPAAASLPGSPAPSQRCFKPYPLITPCYIKTTTRQLSSPNHSPSQS 436
Query: 114 ----PLQRTLPPP-------TSLPAALDPAPSRPASGALRSGRTRA 148
P + P P T+L + PA A G L +G +R+
Sbjct: 437 PNQSPRIKRRPEPSLSRGSRTALASVAAPAKKHRADGGLAAGLSRS 482
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 42.7 bits (99), Expect = 1e-04
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 29 EAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHG-SRLPRTSGSPEEGVS 87
E + ++ RPP R L + A PA + G + LP ++G+P ++
Sbjct: 224 EQIRSQVALMQRPPPRPS-------LSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIA 276
Query: 88 GHGPAAAASLPRAQVPTPPPSHAQPQ--PLQRTLP-PPTSLPAALDPAPSRPASGALRSG 144
G GPAA A+ AQ + P S A P + + P P++ PA PAP+ PA + S
Sbjct: 277 GSGPAAPAAFEGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPA-PAPQSAASS 335
Query: 145 RTRARSKMRTKPA 157
+ ++ S T PA
Sbjct: 336 QPQSAS---TPPA 345
Score = 37.0 bits (84), Expect = 0.007
Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
Query: 42 PGRAPG--PGTLFL-LGKGSPRLA---QHPAARRSHGSRLPRTSGSPEEGVSGHG----- 90
PG AP PG L L G+P A PAA + P + PE G S G
Sbjct: 251 PGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSR--PESGASTPGGPAEP 308
Query: 91 --PAAAASLPRAQVPTPPP---SHAQPQPLQRTLPPPTSLPAALDPAPSRPA 137
PAA ++ P P P P S A QP + PP + + L AP P+
Sbjct: 309 SAPAAPSAAPAPAAPAPAPAPQSAASSQPQSASTPPALAPGSLLGAAPGLPS 360
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 41.6 bits (96), Expect = 3e-04
Identities = 39/118 (33%), Positives = 46/118 (38%), Gaps = 26/118 (22%)
Query: 42 PGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGP------AAAA 95
P A GPG +P + P A S P TSG+P SG GP A +
Sbjct: 109 PVVAQGPGP-------APGVGSAPPASSSAPPATPPTSGAPPG--SGPGPTPTPPPAVTS 159
Query: 96 SLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAAL---------DPAPSRPASGALRSG 144
+ P A PTPP S P Q PPP PAA+ P P P G + G
Sbjct: 160 APPGAPPPTPPSSGVPTTPPQAGGPPPP--PAAVPGPGPGPKQGPGPGGPKGGKMPGG 215
Score = 33.9 bits (76), Expect = 0.060
Identities = 28/95 (29%), Positives = 29/95 (30%), Gaps = 2/95 (2%)
Query: 44 RAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSG--SPEEGVSGHGPAAAASLPRAQ 101
R G G G G R H G L + G P G SG P P Q
Sbjct: 9 RGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQ 68
Query: 102 VPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRP 136
PPP PQ PPP P P P
Sbjct: 69 QQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
Score = 28.1 bits (61), Expect = 3.3
Identities = 31/111 (27%), Positives = 40/111 (36%), Gaps = 15/111 (13%)
Query: 41 PPG------RAP-GPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAA 93
PPG R P GPG G+ P+ P + P P++ P
Sbjct: 35 PPGMGLNQNRGPMGPGP----GQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPH 90
Query: 94 AASLPRAQVPTPPPSHAQPQPLQRTLPPP--TSLPAALDPAP--SRPASGA 140
+ Q P PP ++P Q P P S P A AP + P SGA
Sbjct: 91 PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGA 141
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 41.2 bits (95), Expect = 4e-04
Identities = 41/133 (30%), Positives = 48/133 (36%), Gaps = 13/133 (9%)
Query: 11 VAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQH-PAARR 69
V+ GP P +L + A + A + P G P P P L QH P
Sbjct: 656 VSEGPVLPQSLPSLGAYQQPTA----APGLPVGSVPAPAC-------PPSLQQHFPDPAM 704
Query: 70 SHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAAL 129
S LP S G P P AQ PTP P PQP+ P P LP L
Sbjct: 705 SFAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQ-PTPLPQVLAPQPVVPLQPVPPHLPPYL 763
Query: 130 DPAPSRPASGALR 142
PA A L+
Sbjct: 764 APASQVGAPAQLK 776
Score = 33.9 bits (76), Expect = 0.060
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 21/132 (15%)
Query: 15 PAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSR 74
P APLA+ V A A + +V PPG A L+ H A + G
Sbjct: 865 PGAPLAMPCRTIVPNAPATIPLLAVAPPGVA--------------ALSIHSAVAQLPGQP 910
Query: 75 LPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPL---QRTLPPPTSLP--AAL 129
+ + P+ + P+ ++ + TPP PQP Q LPP +LP L
Sbjct: 911 V-YPAAFPQMAPTDVPPSPHHTVQNMRA-TPPQPALPPQPTLPPQPVLPPQPTLPPQPVL 968
Query: 130 DPAPSRPASGAL 141
P P+RP L
Sbjct: 969 PPQPTRPPQPVL 980
Score = 30.8 bits (68), Expect = 0.51
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 21/129 (16%)
Query: 13 AGPAAPLALVTARAVTEAVARRIVSSVR--PPG----RAPGPGTLFLLGKGSPRLAQHPA 66
AG A P A + R +V S + PPG APGP Q P
Sbjct: 24 AGMAEPRAKAARPGPQRFLRRSVVESDQEEPPGLEAAEAPGP--------------QPPQ 69
Query: 67 ARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTP-PPSHAQPQPLQRTLPPPTSL 125
+ L +T E G A A + AQ P P+ A P+P+ P P +
Sbjct: 70 PLQRRVLLLCKTRRLIAERARGRPAAPAPAALVAQPGAPGAPADAGPEPVGTQEPGPDPI 129
Query: 126 PAALDPAPS 134
AA++ AP+
Sbjct: 130 AAAVETAPA 138
Score = 29.3 bits (64), Expect = 1.5
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 18/96 (18%)
Query: 61 LAQHPAARRSHGSRLPRTSGSPEEGVSGHGP-------------AAAASLPRAQVPTPPP 107
+A+HPA S S P E P A+ L P+ PP
Sbjct: 1318 VAEHPAPEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQAGPSNPP 1377
Query: 108 SHAQPQPLQRTLPPPTSLPA-ALDPAPS---RPASG 139
A P PL + PP T+LP PA S PASG
Sbjct: 1378 G-APPAPLAPSSPPVTALPQDGAAPATSTMPEPASG 1412
Score = 27.7 bits (60), Expect = 4.3
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 81 SPEEGVSGHGPAAAASLPRAQVP-TPPPSHAQPQPLQRTLPPPTSLPAALDPAP 133
+P G+ G P A LP A VP PPP + P + +L P LP A P
Sbjct: 805 TPLAGIDGL-PPALPDLPTATVPPVPPPQYFSPAVILPSLAAP--LPPASPALP 855
Score = 27.3 bits (59), Expect = 5.6
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 95 ASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPA 132
AS PR +P P P +P P T P PA L PA
Sbjct: 1468 ASAPREPLPPPAP---EPSPHSGTPQPALGQPAPLLPA 1502
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 40.8 bits (94), Expect = 5e-04
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 41 PPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRL------PRTSGSPEEGVSGHGPAAA 94
PPG APGP G L P+ L P + P + P
Sbjct: 143 PPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHT 202
Query: 95 ASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRP 136
S P +PTPP PL PPP +PA PAP+ P
Sbjct: 203 LSSP--SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 33.1 bits (74), Expect = 0.10
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 76 PRTSGSPEEGVSGHGPAAAASLPRA-QVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPS 134
PR+ P+ G P + PR+ +VP P P P+Q P A APS
Sbjct: 277 PRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPS 336
Query: 135 R 135
R
Sbjct: 337 R 337
Score = 31.6 bits (70), Expect = 0.30
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 81 SPEEGVSGHGPAAAASLPRA---------QVPTPPPSHAQPQPLQRTLPPPTSLPAALDP 131
+PE G A A + PR + TPPP+ P P PP LP A P
Sbjct: 357 APEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPP 416
Query: 132 APSRPASGALRSGRTR 147
P + +G T+
Sbjct: 417 LPCAQKAAHPPAGFTK 432
Score = 29.6 bits (65), Expect = 1.1
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 90 GPAAAASLPRAQVPTP-PPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRSGRTRA 148
GP S P P P PPS A P P PPP P ++ P P P AL T +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP---PPSMAPPPP-PVLEALSPPHTLS 204
Query: 149 RSKMRTKP 156
+ T P
Sbjct: 205 SPSIPTPP 212
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 40.8 bits (94), Expect = 5e-04
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 41 PPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRL------PRTSGSPEEGVSGHGPAAA 94
PPG APGP G L P+ L P + P + P
Sbjct: 143 PPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHT 202
Query: 95 ASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRP 136
S P +PTPP PL PPP +PA PAP+ P
Sbjct: 203 LSSP--SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 33.1 bits (74), Expect = 0.10
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 76 PRTSGSPEEGVSGHGPAAAASLPRA-QVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPS 134
PR+ P+ G P + PR+ +VP P P P+Q P A APS
Sbjct: 277 PRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPS 336
Query: 135 R 135
R
Sbjct: 337 R 337
Score = 31.6 bits (70), Expect = 0.30
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 81 SPEEGVSGHGPAAAASLPRA---------QVPTPPPSHAQPQPLQRTLPPPTSLPAALDP 131
+PE G A A + PR + TPPP+ P P PP LP A P
Sbjct: 357 APEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPP 416
Query: 132 APSRPASGALRSGRTR 147
P + +G T+
Sbjct: 417 LPCAQKAAHPPAGFTK 432
Score = 29.6 bits (65), Expect = 1.1
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 90 GPAAAASLPRAQVPTP-PPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRSGRTRA 148
GP S P P P PPS A P P PPP P ++ P P P AL T +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP---PPSMAPPPP-PVLEALSPPHTLS 204
Query: 149 RSKMRTKP 156
+ T P
Sbjct: 205 SPSIPTPP 212
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 40.8 bits (94), Expect = 5e-04
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 41 PPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRL------PRTSGSPEEGVSGHGPAAA 94
PPG APGP G L P+ L P + P + P
Sbjct: 143 PPGPAPGPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHT 202
Query: 95 ASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRP 136
S P +PTPP PL PPP +PA PAP+ P
Sbjct: 203 LSSP--SIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASP 242
Score = 33.1 bits (74), Expect = 0.10
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 76 PRTSGSPEEGVSGHGPAAAASLPRA-QVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPS 134
PR+ P+ G P + PR+ +VP P P P+Q P A APS
Sbjct: 277 PRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPS 336
Query: 135 R 135
R
Sbjct: 337 R 337
Score = 31.6 bits (70), Expect = 0.30
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 81 SPEEGVSGHGPAAAASLPRA---------QVPTPPPSHAQPQPLQRTLPPPTSLPAALDP 131
+PE G A A + PR + TPPP+ P P PP LP A P
Sbjct: 357 APEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPAAPP 416
Query: 132 APSRPASGALRSGRTR 147
P + +G T+
Sbjct: 417 LPCAQKAAHPPAGFTK 432
Score = 29.6 bits (65), Expect = 1.1
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 90 GPAAAASLPRAQVPTP-PPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRSGRTRA 148
GP S P P P PPS A P P PPP P ++ P P P AL T +
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP---PPSMAPPPP-PVLEALSPPHTLS 204
Query: 149 RSKMRTKP 156
+ T P
Sbjct: 205 SPSIPTPP 212
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.4 bits (93), Expect = 6e-04
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 16/134 (11%)
Query: 12 AAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSH 71
A+ P +PLA + +A + + PP P SP + + +
Sbjct: 413 ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF------SPPASPPVSPSATP 466
Query: 72 GSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQP---QPLQRTLPPPTSLPAA 128
S+ P + +P V P+ AS P + TPPP P PLQ PPP + PA
Sbjct: 467 PSQAPPSLAAPPLQVP---PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL 523
Query: 129 LDP----APSRPAS 138
P PS PAS
Sbjct: 524 ATPPLQALPSPPAS 537
Score = 37.0 bits (84), Expect = 0.007
Identities = 34/109 (31%), Positives = 41/109 (37%), Gaps = 16/109 (14%)
Query: 38 SVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGP-AAAAS 96
S PP +AP P L P PA LP SP G P + +AS
Sbjct: 494 SATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP----SPPASFPGQAPFSPSAS 549
Query: 97 LPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRSGR 145
LP + + TPPP PP L PS PAS L++ R
Sbjct: 550 LPMSPLATPPPQ-----------APPVLAAPLLQVPPSPPASPTLQAPR 587
Score = 32.3 bits (72), Expect = 0.18
Identities = 37/169 (21%), Positives = 54/169 (31%), Gaps = 41/169 (24%)
Query: 10 TVAAGPAAPLALVTARAVTEAVARRIVSSVRP---PGRAPGPGTLFLLGKGSPRLAQHPA 66
T PAA + +R + SS P P R+ GP +G+PR HP+
Sbjct: 217 TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS-GPSA-----RGTPRAPAHPS 270
Query: 67 ARRSHG-----------------------SRLPRTSGSPEEGVSGHGPAAAASLPRAQ-- 101
+ G S P + SP + P + P +
Sbjct: 271 QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSL 330
Query: 102 -------VPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRS 143
+P PPS + P LQ PP + P+ + P A S
Sbjct: 331 TCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 379
Score = 32.3 bits (72), Expect = 0.18
Identities = 31/103 (30%), Positives = 34/103 (33%), Gaps = 14/103 (13%)
Query: 38 SVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASL 97
S PP +AP P LA P P S S P AA L
Sbjct: 463 SATPPSQAP------------PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 510
Query: 98 PRAQVPTPPPSHAQPQPLQRTLPPPTSLP--AALDPAPSRPAS 138
A+ P P PLQ PP S P A P+ S P S
Sbjct: 511 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMS 553
Score = 31.6 bits (70), Expect = 0.30
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 38/151 (25%)
Query: 39 VRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPR---------------TSGSPE 83
V PGRA G LG+ R++ R + P+ T G+P
Sbjct: 114 VSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPS 173
Query: 84 EGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAA-----LDPAPS---- 134
++ AA + +P P PS A+P+P T P S+ +A +P+P+
Sbjct: 174 PAMARRSRAAGTEV---GLPRPAPS-ARPRP--PTEGPRKSVSSASEHSTTEPSPAARRR 227
Query: 135 --------RPASGALRSGRTRARSKMRTKPA 157
RPAS +L S T S R+ P+
Sbjct: 228 PSAGGGLQRPASRSLSSSATPLSSPARSGPS 258
Score = 31.2 bits (69), Expect = 0.39
Identities = 40/140 (28%), Positives = 51/140 (36%), Gaps = 32/140 (22%)
Query: 41 PPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSG------------ 88
PP R+P TL P LA H ++ S L PE G +
Sbjct: 614 PPSRSPS-STL-----SGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH 667
Query: 89 -----HGPA---AAASLPRAQVPTPP---PSHAQPQ-PLQRTLPPPTSLPA--ALDPAPS 134
GPA A P A +P PP P A + T P ++ PA ALDP PS
Sbjct: 668 PAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPS 727
Query: 135 RPASGALRSGRTRARSKMRT 154
SG + A + R+
Sbjct: 728 PGTSGGKAAAGAGAGASSRS 747
Score = 29.6 bits (65), Expect = 1.1
Identities = 37/145 (25%), Positives = 49/145 (33%), Gaps = 17/145 (11%)
Query: 24 ARAVTEAVARRIVSSVRPPG--RAPGPGT---LFLLGKGSPRLAQHPAARRSHG------ 72
A A T A + + RPPG R P P T L +LG + + P A R+ G
Sbjct: 12 AAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGA-VGRKPLAERAGGIGGATI 70
Query: 73 -SRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDP 131
PR + G S PA+ PP + P P+ P P
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVS----SPGRASGTTRP 126
Query: 132 APSRPASGALRSGRTRARSKMRTKP 156
P + + T AR K P
Sbjct: 127 GPLGQKGLRISAEETVARGKATEAP 151
Score = 28.9 bits (63), Expect = 1.9
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 59 PRLAQHPAARRSHGSRLPRTSGSPE-EGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQR 117
P L P+ + S+ + GSP + P+ S P PP+ A P PLQ
Sbjct: 349 PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP-PLQA 407
Query: 118 TLPPPTSLPAALDPAPSRPASGAL 141
PP S P + PS A AL
Sbjct: 408 PPSPPASPPLSPLATPSPQAPNAL 431
Score = 27.7 bits (60), Expect = 4.3
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 58 SPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQR 117
+P L P+ S + PR +P S GP +L A P PPPS + L
Sbjct: 568 APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLAL--APGPPPPPSRSPSSTLSG 625
Query: 118 T-----LPPPTSLPAALDPAPSRPASGALRS 143
TS P L S P GA S
Sbjct: 626 PDLAGHSSSATSTPEELRGYDSGPEGGAAAS 656
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 40.4 bits (93), Expect = 6e-04
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 16/134 (11%)
Query: 12 AAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSH 71
A+ P +PLA + +A + + PP P SP + + +
Sbjct: 374 ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF------SPPASPPVSPSATP 427
Query: 72 GSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQP---QPLQRTLPPPTSLPAA 128
S+ P + +P V P+ AS P + TPPP P PLQ PPP + PA
Sbjct: 428 PSQAPPSLAAPPLQVP---PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPAL 484
Query: 129 LDP----APSRPAS 138
P PS PAS
Sbjct: 485 ATPPLQALPSPPAS 498
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 10 TVAAGPAAPLALVTARAVTEAVARRIVSSVRP---PGRAPGPGTLFLLGKGSPRLAQHPA 66
T PAA + +R + SS P P R+ GP +G+PR HP+
Sbjct: 208 TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS-GPSA-----RGTPRAPAHPS 261
Query: 67 ARRSHGS---RLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPT 123
+ G R P+ + ++ GP +++ L P+ PPS + P LQ PP
Sbjct: 262 QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS-PSAPPSPSAPPSLQTLPSPPA 320
Query: 124 SLPAALDPAPSRPASGALRS 143
+ P+ + P A S
Sbjct: 321 TPPSQATTSLGSPTLQATHS 340
Score = 37.0 bits (84), Expect = 0.007
Identities = 34/109 (31%), Positives = 41/109 (37%), Gaps = 16/109 (14%)
Query: 38 SVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGP-AAAAS 96
S PP +AP P L P PA LP SP G P + +AS
Sbjct: 455 SATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP----SPPASFPGQAPFSPSAS 510
Query: 97 LPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRSGR 145
LP + + TPPP PP L PS PAS L++ R
Sbjct: 511 LPMSPLATPPPQ-----------APPVLAAPLLQVPPSPPASPTLQAPR 548
Score = 35.8 bits (81), Expect = 0.016
Identities = 46/167 (27%), Positives = 59/167 (35%), Gaps = 27/167 (16%)
Query: 15 PAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARR--SHG 72
P+ +A + A TE R S RP GP PAARR S G
Sbjct: 163 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 222
Query: 73 SRLPR-------TSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPP---- 121
L R +S +P + GP+A + PRA PS +P+ LQ PP
Sbjct: 223 GGLQRPASRSLSSSATPLSSPARSGPSARGT-PRAPAH---PSQPKPKGLQALRPPQVTP 278
Query: 122 ----------PTSLPAALDPAPSRPASGALRSGRTRARSKMRTKPAQ 158
P S P+PS P S + S T P+Q
Sbjct: 279 PRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQ 325
Score = 32.3 bits (72), Expect = 0.18
Identities = 31/103 (30%), Positives = 34/103 (33%), Gaps = 14/103 (13%)
Query: 38 SVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASL 97
S PP +AP P LA P P S S P AA L
Sbjct: 424 SATPPSQAP------------PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 471
Query: 98 PRAQVPTPPPSHAQPQPLQRTLPPPTSLP--AALDPAPSRPAS 138
A+ P P PLQ PP S P A P+ S P S
Sbjct: 472 QLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMS 514
Score = 31.6 bits (70), Expect = 0.30
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 38/151 (25%)
Query: 39 VRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPR---------------TSGSPE 83
V PGRA G LG+ R++ R + P+ T G+P
Sbjct: 105 VSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPS 164
Query: 84 EGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAA-----LDPAPS---- 134
++ AA + +P P PS A+P+P T P S+ +A +P+P+
Sbjct: 165 PAMARRSRAAGTEV---GLPRPAPS-ARPRP--PTEGPRKSVSSASEHSTTEPSPAARRR 218
Query: 135 --------RPASGALRSGRTRARSKMRTKPA 157
RPAS +L S T S R+ P+
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGPS 249
Score = 31.2 bits (69), Expect = 0.39
Identities = 40/140 (28%), Positives = 51/140 (36%), Gaps = 32/140 (22%)
Query: 41 PPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVS------------- 87
PP R+P TL P LA H ++ S L PE G +
Sbjct: 575 PPSRSPS-STL-----SGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH 628
Query: 88 ----GHGPA---AAASLPRAQVPTPP---PSHAQPQ-PLQRTLPPPTSLPA--ALDPAPS 134
GPA A P A +P PP P A + T P ++ PA ALDP PS
Sbjct: 629 PAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPS 688
Query: 135 RPASGALRSGRTRARSKMRT 154
SG + A + R+
Sbjct: 689 PGTSGGKAAAGAGAGASSRS 708
Score = 28.9 bits (63), Expect = 1.9
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 59 PRLAQHPAARRSHGSRLPRTSGSPE-EGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQR 117
P L P+ + S+ + GSP + P+ S P PP+ A P PLQ
Sbjct: 310 PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP-PLQA 368
Query: 118 TLPPPTSLPAALDPAPSRPASGAL 141
PP S P + PS A AL
Sbjct: 369 PPSPPASPPLSPLATPSPQAPNAL 392
Score = 27.7 bits (60), Expect = 4.3
Identities = 27/91 (29%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 58 SPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQR 117
+P L P+ S + PR +P S GP +L A P PPPS + L
Sbjct: 529 APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLAL--APGPPPPPSRSPSSTLSG 586
Query: 118 T-----LPPPTSLPAALDPAPSRPASGALRS 143
TS P L S P GA S
Sbjct: 587 PDLAGHSSSATSTPEELRGYDSGPEGGAAAS 617
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 40.4 bits (93), Expect = 6e-04
Identities = 38/116 (32%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 40 RPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPR 99
R G P PG LG + L P A GS G EG +G A LP
Sbjct: 129 RHRGVGPDPGRETALGTATLSLRSSPTA----GSVSTGLVGKQREGGNGPWRAPVFRLPG 184
Query: 100 AQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRSGRTRARSKMRTK 155
A++ L LP PT+LP A P RP S + R G +R RS+ T+
Sbjct: 185 ARLR-----------LSSQLPSPTTLPRAAPLTPYRPGSPSPR-GHSRLRSRPPTR 228
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 40.4 bits (93), Expect = 6e-04
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 17/157 (10%)
Query: 10 TVAAGPAAPLALVTARAVTEAVARRIVSSVR---------PPGRAPGPGTLFLLGKGSPR 60
T +A P T+R V V+R ++ PP P P T K P
Sbjct: 397 TKSALPTQKQVPPTSRPVPARVSRPAEKPIQRNPGMPRPPPPSTRPLPPTTSSSKKPIPT 456
Query: 61 LAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLP 120
LA+ A SH S+ P ++ + S H P +L + PTP + + P T+
Sbjct: 457 LARTEAKITSHASK-PASART-----STHKPPPFTALSSSPAPTPGSTRSTRPPA--TMV 508
Query: 121 PPTSLPAALDPAPSRPASGALRSGRTRARSKMRTKPA 157
PPTS + AP+ P G+ +G + +K A
Sbjct: 509 PPTSGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKA 545
Score = 35.0 bits (79), Expect = 0.027
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 23 TARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQH--------PAARRSHGSR 74
TA + + A S RPP P + G +PR A +++ GS
Sbjct: 485 TALSSSPAPTPGSTRSTRPPATMVPPTS----GTSTPRTAPAVPTPGSAPTGSKKPIGSE 540
Query: 75 LPRTSG---SPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDP 131
+ +G SP + V AA +P + + T P S QPQP Q+T P PA
Sbjct: 541 ASKKAGPKSSPRKPVPLRPGKAARDVPLSDLTTRP-SPRQPQPSQQTTPALVLAPAQFLS 599
Query: 132 APSRPAS 138
+ RP S
Sbjct: 600 SSPRPTS 606
Score = 26.6 bits (57), Expect = 9.6
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 25/108 (23%)
Query: 54 LGKGSPRLAQHPAARRSHGSRLPRTSGSPE--------EGVSGHGPAAAASLP------R 99
L +P L PA R G+ P T P+ + ++ GPA LP
Sbjct: 272 LTTATPALGSLPAGRGPRGTVAPATPTKPQRTSPTNPHQHMAVGGPAQTPLLPAKLSASN 331
Query: 100 AQVPTPP---------PSHAQPQPLQRTLPPPTSLPAALDPAPSRPAS 138
A P P P A QP Q+ T +P +L PS P++
Sbjct: 332 ALDPMLPASVGGSTRTPRPAAAQPSQKI--TATKIPKSLPTKPSAPST 377
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 40.4 bits (93), Expect = 6e-04
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 73 SRLPRTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQP-LQRTLPPPTSLPAALDP 131
+R P + GSP+ P AAS P P+P P +QPQP + T+P PT P P
Sbjct: 1233 ARTPVSPGSPQPQ-----PPVAASTPP---PSPLPICSQPQPSTEATVPSPTQSPIRFQP 1284
Query: 132 APSRPAS 138
AP++ ++
Sbjct: 1285 APAKTST 1291
Score = 37.7 bits (86), Expect = 0.004
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 18/120 (15%)
Query: 37 SSVRPPGRAPGPGTLFLLGKGSP-----RLAQHPAARRSHGSR--------LPRT---SG 80
S P R+P L + SP +L PAA + LP+ +
Sbjct: 1152 SQATSPIRSPQESALLFIPVHSPSTEGPQLPPVPAATQEKSPEERLFPEPLLPKEKPKAD 1211
Query: 81 SPEEGVSGHGPAAA--ASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPAS 138
+P + + H P + +LP A+ P P S P+ + PPP+ LP P PS A+
Sbjct: 1212 APSDLKAVHSPIRSQPVTLPEARTPVSPGSPQPQPPVAASTPPPSPLPICSQPQPSTEAT 1271
Score = 27.7 bits (60), Expect = 4.3
Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 27/98 (27%)
Query: 65 PAARRSHGSRLPRTSGSPEEGVSGHGPAA---------------AASLPRAQVPTPPPSH 109
P+ R ++ R S G+ HG ++ A P + P PPP
Sbjct: 1407 PSDRELRSAQEERRELSSSSGLGLHGSSSNMKTLGSQSFNTSDSAMLTPPSSPPPPPPPG 1466
Query: 110 AQPQPLQRTL----------PPPTSLPAALDPAPSRPA 137
+P L+R L PPP LPA P PA
Sbjct: 1467 EEPATLRRKLREAEPNASVVPPP--LPATWMRPPREPA 1502
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 40.0 bits (92), Expect = 8e-04
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 76 PRTSGSPEEGVSGHG--PAAAASLPRAQVPTPPPSHAQ-----PQPLQRTLPPPTSLPAA 128
P SG P G G P + P A P PPPS P P + PPP +LP++
Sbjct: 294 PHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSS 353
Query: 129 LDPAPSRPASGALRSG 144
P P L G
Sbjct: 354 APSGPPPPPPSVLGVG 369
Score = 32.7 bits (73), Expect = 0.13
Identities = 30/108 (27%), Positives = 37/108 (34%), Gaps = 13/108 (12%)
Query: 41 PPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGP--------- 91
PP GP G+G+P P +R + P P V P
Sbjct: 292 PPPHNSGPPPPPARGRGAP---PPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPP 348
Query: 92 AAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASG 139
A +S P P PPPS P+ PPP P P P P+ G
Sbjct: 349 ALPSSAPSGP-PPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDG 395
Score = 32.3 bits (72), Expect = 0.18
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 77 RTSGSPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAAL--DPAPS 134
R P S GP P P PPP+ + P PPP+ P A P PS
Sbjct: 273 RRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAP----PPPPSRAPTAAPPPPPPS 328
Query: 135 RPA 137
RP+
Sbjct: 329 RPS 331
Score = 28.1 bits (61), Expect = 3.3
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 87 SGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSR 135
+G A L R P PPPS P P PPP + P P+R
Sbjct: 262 TGGVEAVKNELRRQAPPPPPPSRGGPPP-----PPPPPHNSGPPPPPAR 305
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 40.0 bits (92), Expect = 8e-04
Identities = 41/141 (29%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 24 ARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHP-----AARRSHGSRLPRT 78
A A+++ R S++RPP + G G+G P + P A RR R PR
Sbjct: 27 AEALSQPTLRHSASALRPPRLSRGKDLKPRCGRG-PAHSPDPGEGCEAWRRLSADRWPRP 85
Query: 79 SG-SPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPA 137
+ SP AA AS P Q P P P+P+ PPP L AP RP
Sbjct: 86 ASLSPR--------AALASAP-GQKPQPARQAQLPRPVSGVRPPPRG-RVGLSQAPGRPL 135
Query: 138 SGALRSGRTRARSKMRTKPAQ 158
R+ R + +P +
Sbjct: 136 GACARAKGIRLVNPSPPRPPE 156
Score = 29.6 bits (65), Expect = 1.1
Identities = 42/164 (25%), Positives = 54/164 (32%), Gaps = 40/164 (24%)
Query: 36 VSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSR---LPRTSGSPEEGVSGHGPA 92
V++ PP R P G P +H RR +R LPRTS E S
Sbjct: 201 VAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLC 260
Query: 93 AAASLPRAQVP---------TPPPSHA-------------------------QPQPLQRT 118
A +S A +P +P P+ A P RT
Sbjct: 261 ATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRT 320
Query: 119 LPPP---TSLPAALDPAPSRPASGALRSGRTRARSKMRTKPAQV 159
LP P T+ PAA P PA G + R +P +V
Sbjct: 321 LPAPPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDEPRRV 364
Score = 28.9 bits (63), Expect = 1.9
Identities = 44/163 (26%), Positives = 61/163 (37%), Gaps = 35/163 (21%)
Query: 7 VRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFL---LGKGSPRLAQ 63
+R+ + P P + + AVT + R ++ PG G G+ + K R+A
Sbjct: 144 IRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAA 203
Query: 64 HPAARRSHGSRLPRTSGS-------PEEGVSGHGP--AAAASLPR-----AQVPTPPP-- 107
P R R+P GS P E G LPR ++VP+ P
Sbjct: 204 PPPPER---PRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLC 260
Query: 108 ----SHAQPQP-LQRTLPPPTSLPAALDPAPSRPASGALRSGR 145
SH+ P P L P+ PA PA G LR GR
Sbjct: 261 ATSSSHSAPLPFFWSPLRNPSPRPA--------PACGELRLGR 295
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 40.0 bits (92), Expect = 8e-04
Identities = 41/141 (29%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 24 ARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHP-----AARRSHGSRLPRT 78
A A+++ R S++RPP + G G+G P + P A RR R PR
Sbjct: 27 AEALSQPTLRHSASALRPPRLSRGKDLKPRCGRG-PAHSPDPGEGCEAWRRLSADRWPRP 85
Query: 79 SG-SPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPA 137
+ SP AA AS P Q P P P+P+ PPP L AP RP
Sbjct: 86 ASLSPR--------AALASAP-GQKPQPARQAQLPRPVSGVRPPPRG-RVGLSQAPGRPL 135
Query: 138 SGALRSGRTRARSKMRTKPAQ 158
R+ R + +P +
Sbjct: 136 GACARAKGIRLVNPSPPRPPE 156
Score = 29.6 bits (65), Expect = 1.1
Identities = 42/164 (25%), Positives = 54/164 (32%), Gaps = 40/164 (24%)
Query: 36 VSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSR---LPRTSGSPEEGVSGHGPA 92
V++ PP R P G P +H RR +R LPRTS E S
Sbjct: 201 VAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLC 260
Query: 93 AAASLPRAQVP---------TPPPSHA-------------------------QPQPLQRT 118
A +S A +P +P P+ A P RT
Sbjct: 261 ATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRT 320
Query: 119 LPPP---TSLPAALDPAPSRPASGALRSGRTRARSKMRTKPAQV 159
LP P T+ PAA P PA G + R +P +V
Sbjct: 321 LPAPPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDEPRRV 364
Score = 28.9 bits (63), Expect = 1.9
Identities = 44/163 (26%), Positives = 61/163 (37%), Gaps = 35/163 (21%)
Query: 7 VRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFL---LGKGSPRLAQ 63
+R+ + P P + + AVT + R ++ PG G G+ + K R+A
Sbjct: 144 IRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAA 203
Query: 64 HPAARRSHGSRLPRTSGS-------PEEGVSGHGP--AAAASLPR-----AQVPTPPP-- 107
P R R+P GS P E G LPR ++VP+ P
Sbjct: 204 PPPPER---PRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLC 260
Query: 108 ----SHAQPQP-LQRTLPPPTSLPAALDPAPSRPASGALRSGR 145
SH+ P P L P+ PA PA G LR GR
Sbjct: 261 ATSSSHSAPLPFFWSPLRNPSPRPA--------PACGELRLGR 295
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 40.0 bits (92), Expect = 8e-04
Identities = 41/141 (29%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 24 ARAVTEAVARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHP-----AARRSHGSRLPRT 78
A A+++ R S++RPP + G G+G P + P A RR R PR
Sbjct: 27 AEALSQPTLRHSASALRPPRLSRGKDLKPRCGRG-PAHSPDPGEGCEAWRRLSADRWPRP 85
Query: 79 SG-SPEEGVSGHGPAAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPA 137
+ SP AA AS P Q P P P+P+ PPP L AP RP
Sbjct: 86 ASLSPR--------AALASAP-GQKPQPARQAQLPRPVSGVRPPPRG-RVGLSQAPGRPL 135
Query: 138 SGALRSGRTRARSKMRTKPAQ 158
R+ R + +P +
Sbjct: 136 GACARAKGIRLVNPSPPRPPE 156
Score = 29.6 bits (65), Expect = 1.1
Identities = 42/164 (25%), Positives = 54/164 (32%), Gaps = 40/164 (24%)
Query: 36 VSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSR---LPRTSGSPEEGVSGHGPA 92
V++ PP R P G P +H RR +R LPRTS E S
Sbjct: 201 VAAPPPPERPRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLC 260
Query: 93 AAASLPRAQVP---------TPPPSHA-------------------------QPQPLQRT 118
A +S A +P +P P+ A P RT
Sbjct: 261 ATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRT 320
Query: 119 LPPP---TSLPAALDPAPSRPASGALRSGRTRARSKMRTKPAQV 159
LP P T+ PAA P PA G + R +P +V
Sbjct: 321 LPAPPAPTAWPAAGAPGAPNPAESRRGPGPAQGPPSRRDEPRRV 364
Score = 28.9 bits (63), Expect = 1.9
Identities = 44/163 (26%), Positives = 61/163 (37%), Gaps = 35/163 (21%)
Query: 7 VRVTVAAGPAAPLALVTARAVTEAVARRIVSSVRPPGRAPGPGTLFL---LGKGSPRLAQ 63
+R+ + P P + + AVT + R ++ PG G G+ + K R+A
Sbjct: 144 IRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAA 203
Query: 64 HPAARRSHGSRLPRTSGS-------PEEGVSGHGP--AAAASLPR-----AQVPTPPP-- 107
P R R+P GS P E G LPR ++VP+ P
Sbjct: 204 PPPPER---PRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSEVPSTRPLC 260
Query: 108 ----SHAQPQP-LQRTLPPPTSLPAALDPAPSRPASGALRSGR 145
SH+ P P L P+ PA PA G LR GR
Sbjct: 261 ATSSSHSAPLPFFWSPLRNPSPRPA--------PACGELRLGR 295
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 40.0 bits (92), Expect = 8e-04
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 55 GKGSPRLAQHPAARRSHGSRLPRTS------GSPEEGVSGHG---PAAAASLPRAQVPTP 105
GK S A+ P R P T G+P + + + P AAA+ P A TP
Sbjct: 1178 GKSSASKAKEPPFVRKSALEQPETGKAGADGGTPTDRYNSYNRPRPKAAAA-PAATTATP 1236
Query: 106 PPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASGALRSGRTRAR 149
PP A PQP LP PT L + P + SG+ +G + AR
Sbjct: 1237 PPEGAPPQPGVHNLPVPT-LFGTVKQTP-KTGSGSPFAGNSPAR 1278
Score = 29.3 bits (64), Expect = 1.5
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 103 PTPPPSHAQPQPLQRTLPPPTSLPAALDPAP-SRPAS 138
P PPPS + P P PPP S P+ +P +RPA+
Sbjct: 8 PPPPPSESPPPP----SPPPPSTPSPPPCSPDARPAT 40
>gi|68800350 interleukin-1 receptor-associated kinase 1 isoform 3
[Homo sapiens]
Length = 633
Score = 39.7 bits (91), Expect = 0.001
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
Query: 32 ARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGP 91
AR I+++ PP P PGT +PR + PA + + SP + S
Sbjct: 95 ARDIITAWHPPAPLPSPGTT------APRPSSIPAPAEAE-------AWSPRKLPSSAST 141
Query: 92 AAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPAS 138
+ + P +Q + P P P PPP+ P++ P P S
Sbjct: 142 FLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVS 188
>gi|68800343 interleukin-1 receptor-associated kinase 1 isoform 2
[Homo sapiens]
Length = 682
Score = 39.7 bits (91), Expect = 0.001
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
Query: 32 ARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGP 91
AR I+++ PP P PGT +PR + PA + + SP + S
Sbjct: 95 ARDIITAWHPPAPLPSPGTT------APRPSSIPAPAEAE-------AWSPRKLPSSAST 141
Query: 92 AAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPAS 138
+ + P +Q + P P P PPP+ P++ P P S
Sbjct: 142 FLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVS 188
>gi|68800243 interleukin-1 receptor-associated kinase 1 isoform 1
[Homo sapiens]
Length = 712
Score = 39.7 bits (91), Expect = 0.001
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
Query: 32 ARRIVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGP 91
AR I+++ PP P PGT +PR + PA + + SP + S
Sbjct: 95 ARDIITAWHPPAPLPSPGTT------APRPSSIPAPAEAE-------AWSPRKLPSSAST 141
Query: 92 AAAASLPRAQVPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPAS 138
+ + P +Q + P P P PPP+ P++ P P S
Sbjct: 142 FLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVS 188
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 39.7 bits (91), Expect = 0.001
Identities = 29/58 (50%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 86 VSGHGPAAAASLPRAQVPT-PPPSHAQPQPLQRT----LPPPTSLPAALDPAPSRPAS 138
VS PAA S P A PT PPP QP+P + T PP SLP A P PSRPA+
Sbjct: 103 VSPADPAAPPSSPHA--PTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQP-PSRPAA 157
Score = 28.5 bits (62), Expect = 2.5
Identities = 35/121 (28%), Positives = 43/121 (35%), Gaps = 14/121 (11%)
Query: 43 GRAPGPGTLFLLGKGSPRLAQHPAAR---RSHGSRLPRTSGSPEEGVSGHGPAAAASLPR 99
GR P L L P A+ AR R H P P +LP
Sbjct: 44 GRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPV 103
Query: 100 AQV-PTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRPASG--ALRSGRTRARSKMRTKP 156
+ P PPS P T PPP A+ P PS P G AL G ++ ++P
Sbjct: 104 SPADPAAPPS----SPHAPTRPPPQ----AVQPRPSEPTPGSEALPPGSLPEAAQPPSRP 155
Query: 157 A 157
A
Sbjct: 156 A 156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,859,883
Number of Sequences: 37866
Number of extensions: 644673
Number of successful extensions: 9811
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 1228
Number of HSP's that attempted gapping in prelim test: 5096
Number of HSP's gapped (non-prelim): 4504
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.