BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239742320 PREDICTED: hypothetical protein XP_002342490 [Homo sapiens] (194 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239753829 PREDICTED: hypothetical protein [Homo sapiens] 397 e-111 gi|239748392 PREDICTED: hypothetical protein XP_002346653 [Homo ... 397 e-111 gi|239742320 PREDICTED: hypothetical protein XP_002342490 [Homo ... 397 e-111 gi|239756710 PREDICTED: hypothetical protein XP_002345028 [Homo ... 35 0.031 gi|239751205 PREDICTED: hypothetical protein XP_002347755 [Homo ... 35 0.031 gi|239745697 PREDICTED: hypothetical protein XP_002343528 [Homo ... 35 0.031 gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens] 34 0.068 gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 34 0.089 gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 34 0.089 gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 34 0.089 gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 34 0.089 gi|116805332 musculin [Homo sapiens] 34 0.089 gi|182507165 thymus expressed gene 3-like [Homo sapiens] 33 0.12 gi|239757181 PREDICTED: hypothetical protein XP_002345195 [Homo ... 33 0.15 gi|239751691 PREDICTED: hypothetical protein [Homo sapiens] 33 0.15 gi|239746195 PREDICTED: hypothetical protein XP_002343673 [Homo ... 33 0.15 gi|30425394 hypothetical protein LOC128876 [Homo sapiens] 33 0.15 gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 33 0.15 gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 33 0.20 gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo ... 32 0.26 gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens] 32 0.26 gi|148664228 hypothetical protein LOC158293 [Homo sapiens] 32 0.26 gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] 32 0.26 gi|33188461 GATA binding protein 4 [Homo sapiens] 32 0.34 gi|5454102 transforming, acidic coiled-coil containing protein 3... 32 0.34 gi|65301130 kazrin isoform B [Homo sapiens] 32 0.34 gi|112420992 crumbs homolog 2 [Homo sapiens] 32 0.34 gi|148922920 DENN/MADD domain containing 4B [Homo sapiens] 32 0.34 gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 32 0.44 gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 32 0.44 >gi|239753829 PREDICTED: hypothetical protein [Homo sapiens] Length = 194 Score = 397 bits (1020), Expect = e-111 Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG 60 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG Sbjct: 1 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG 60 Query: 61 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR 120 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR Sbjct: 61 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR 120 Query: 121 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS 180 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS Sbjct: 121 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS 180 Query: 181 WTSPGLSACPWLCL 194 WTSPGLSACPWLCL Sbjct: 181 WTSPGLSACPWLCL 194 >gi|239748392 PREDICTED: hypothetical protein XP_002346653 [Homo sapiens] Length = 194 Score = 397 bits (1020), Expect = e-111 Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG 60 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG Sbjct: 1 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG 60 Query: 61 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR 120 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR Sbjct: 61 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR 120 Query: 121 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS 180 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS Sbjct: 121 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS 180 Query: 181 WTSPGLSACPWLCL 194 WTSPGLSACPWLCL Sbjct: 181 WTSPGLSACPWLCL 194 >gi|239742320 PREDICTED: hypothetical protein XP_002342490 [Homo sapiens] Length = 194 Score = 397 bits (1020), Expect = e-111 Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG 60 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG Sbjct: 1 MVSVKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGG 60 Query: 61 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR 120 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR Sbjct: 61 SQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSR 120 Query: 121 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS 180 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS Sbjct: 121 LLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPSARRHLFQPLRARGLLHSS 180 Query: 181 WTSPGLSACPWLCL 194 WTSPGLSACPWLCL Sbjct: 181 WTSPGLSACPWLCL 194 >gi|239756710 PREDICTED: hypothetical protein XP_002345028 [Homo sapiens] Length = 141 Score = 35.4 bits (80), Expect = 0.031 Identities = 44/135 (32%), Positives = 54/135 (40%), Gaps = 23/135 (17%) Query: 25 VTGPWEPRDCGA-------TAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRCREVVGA 77 V G W RD GA AAA +G L +G G G + PG + G Sbjct: 9 VKGKWVFRDVGAFLSTGSTDAAAPKGMLGLR-----SGRGGGRAGRKMPGFKSLGRIRGR 63 Query: 78 SGPR--LASRV---RPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMATAS 132 + R L SRV RP W R G PG + A A + A + G R +R+ Sbjct: 64 AAVRVVLDSRVIRPRPFLMWERPGTLVRPG-FAAAAGRADADKGLGCRARGNRLGGGAGR 122 Query: 133 GGG-----AGGAARG 142 GGG A AARG Sbjct: 123 GGGSWPEQARAAARG 137 >gi|239751205 PREDICTED: hypothetical protein XP_002347755 [Homo sapiens] Length = 141 Score = 35.4 bits (80), Expect = 0.031 Identities = 44/135 (32%), Positives = 54/135 (40%), Gaps = 23/135 (17%) Query: 25 VTGPWEPRDCGA-------TAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRCREVVGA 77 V G W RD GA AAA +G L +G G G + PG + G Sbjct: 9 VKGKWVFRDVGAFLSTGSTDAAAPKGMLGLR-----SGRGGGRAGRKMPGFKSLGRIRGR 63 Query: 78 SGPR--LASRV---RPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMATAS 132 + R L SRV RP W R G PG + A A + A + G R +R+ Sbjct: 64 AAVRVVLDSRVIRPRPFLMWERPGTLVRPG-FAAAAGRADADKGLGCRARGNRLGGGAGR 122 Query: 133 GGG-----AGGAARG 142 GGG A AARG Sbjct: 123 GGGSWPEQARAAARG 137 >gi|239745697 PREDICTED: hypothetical protein XP_002343528 [Homo sapiens] Length = 141 Score = 35.4 bits (80), Expect = 0.031 Identities = 44/135 (32%), Positives = 54/135 (40%), Gaps = 23/135 (17%) Query: 25 VTGPWEPRDCGA-------TAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRCREVVGA 77 V G W RD GA AAA +G L +G G G + PG + G Sbjct: 9 VKGKWVFRDVGAFLSTGSTDAAAPKGMLGLR-----SGRGGGRAGRKMPGFKSLGRIRGR 63 Query: 78 SGPR--LASRV---RPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMATAS 132 + R L SRV RP W R G PG + A A + A + G R +R+ Sbjct: 64 AAVRVVLDSRVIRPRPFLMWERPGTLVRPG-FAAAAGRADADKGLGCRARGNRLGGGAGR 122 Query: 133 GGG-----AGGAARG 142 GGG A AARG Sbjct: 123 GGGSWPEQARAAARG 137 >gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens] Length = 1479 Score = 34.3 bits (77), Expect = 0.068 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Query: 51 LPPAGFGA-GGSQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAE 109 LPP + + G+ A G +R R S +AS T RG S V +Q Sbjct: 629 LPPGSYASLDGTTTKAEGRIRTRRQSSGSATNVAS------TPDNRGRSRAKVVSQSQRS 682 Query: 110 ESSASRVSGSRLLPDRVFMATASGGGAGGAARGP 143 S+ +GSR + + GG GG++RGP Sbjct: 683 RSANPAGAGSRSSSPGKLLGSGYGGLTGGSSRGP 716 >gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] Length = 449 Score = 33.9 bits (76), Expect = 0.089 Identities = 41/146 (28%), Positives = 52/146 (35%), Gaps = 22/146 (15%) Query: 9 RMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGS------- 61 R +P SG RA + G R+ R P +G G G Sbjct: 39 RSLPSVSGPVRGRAERRPARGKHVRGGGVGGCRDSRAGGSHAAP-SGLGVPGDSESALGL 97 Query: 62 -QPLAPGSLRCREVVGAS---GPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVS 117 +P P SLR +G + GP AS +T R V A P ++ + R Sbjct: 98 LEPGPPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSR-VPAEPSSRRGASKRRESWRTD 156 Query: 118 GSRLLPDRVFMATASGGGAGGAARGP 143 G RL SG G GAARGP Sbjct: 157 GERL---------RSGRGCAGAARGP 173 >gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo sapiens] Length = 402 Score = 33.9 bits (76), Expect = 0.089 Identities = 41/146 (28%), Positives = 52/146 (35%), Gaps = 22/146 (15%) Query: 9 RMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGS------- 61 R +P SG RA + G R+ R P +G G G Sbjct: 39 RSLPSVSGPVRGRAERRPARGKHVRGGGVGGCRDSRAGGSHAAP-SGLGVPGDSESALGL 97 Query: 62 -QPLAPGSLRCREVVGAS---GPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVS 117 +P P SLR +G + GP AS +T R V A P ++ + R Sbjct: 98 LEPGPPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSR-VPAEPSSRRGASKRRESWRTD 156 Query: 118 GSRLLPDRVFMATASGGGAGGAARGP 143 G RL SG G GAARGP Sbjct: 157 GERL---------RSGRGCAGAARGP 173 >gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo sapiens] Length = 449 Score = 33.9 bits (76), Expect = 0.089 Identities = 41/146 (28%), Positives = 52/146 (35%), Gaps = 22/146 (15%) Query: 9 RMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGS------- 61 R +P SG RA + G R+ R P +G G G Sbjct: 39 RSLPSVSGPVRGRAERRPARGKHVRGGGVGGCRDSRAGGSHAAP-SGLGVPGDSESALGL 97 Query: 62 -QPLAPGSLRCREVVGAS---GPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVS 117 +P P SLR +G + GP AS +T R V A P ++ + R Sbjct: 98 LEPGPPKSLRISVTLGQAPRAGPSAASSAAAGKTPPSR-VPAEPSSRRGASKRRESWRTD 156 Query: 118 GSRLLPDRVFMATASGGGAGGAARGP 143 G RL SG G GAARGP Sbjct: 157 GERL---------RSGRGCAGAARGP 173 >gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo sapiens] Length = 224 Score = 33.9 bits (76), Expect = 0.089 Identities = 38/134 (28%), Positives = 49/134 (36%), Gaps = 2/134 (1%) Query: 32 RDCGATAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRCREVVGASGPRLASRVRPSRT 91 + GA A G +Q PAG GG Q A G R E G R + R Sbjct: 26 KSAGAAAGEEGGARLQATRTWPAGILEGGPQVAARGGGRGWEGGGLGARRAVTAARRGEW 85 Query: 92 WRRR--GVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMATASGGGAGGAARGPFPRDLA 149 R R +A+ ++ A + ASR G R + A GGGA P A Sbjct: 86 GRARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPA 145 Query: 150 GATCCRESRSSPSA 163 G + SR + A Sbjct: 146 GCSGGNRSRRAAGA 159 >gi|116805332 musculin [Homo sapiens] Length = 206 Score = 33.9 bits (76), Expect = 0.089 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 10/88 (11%) Query: 109 EESSASRVSGSRLLPDRVFMATASGGGAGGAARG----PFPRDLAGATCCRESRSSPSAR 164 EE A +GS R A GGGAGG+A G P P + A C + R++ +AR Sbjct: 56 EERCALGTAGSAEGCKRKRPRVAGGGGAGGSAGGGGKKPLPAKGSAAECKQSQRNAANAR 115 Query: 165 RHLFQPLRARGLLHSSWTSPGLSACPWL 192 RAR + S S ++ PW+ Sbjct: 116 E------RARMRVLSKAFSRLKTSLPWV 137 >gi|182507165 thymus expressed gene 3-like [Homo sapiens] Length = 629 Score = 33.5 bits (75), Expect = 0.12 Identities = 46/143 (32%), Positives = 57/143 (39%), Gaps = 16/143 (11%) Query: 13 GASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRCR 72 G + T +AA W A A +GR V+ + P A G P AP Sbjct: 460 GPAPTLAAQAAGSCRRWRST---AEIDAADGRRVRPRA-PAARVPGPGPSPSAPQRRLLY 515 Query: 73 EVVGASGPRLASRVRP-SRTWRRRGV---------SAVPGVWLAQAEESSASRVSGSRLL 122 G+ A R+ P R GV SA G A + SS S SG + Sbjct: 516 GCAGSDSECSAGRLGPLGRRGPAGGVGGGYGESESSASEGESPAFSSASSDSDGSGGLVW 575 Query: 123 PDRVFMATA-SGGGAG-GAARGP 143 P ++ ATA SGGGAG GA GP Sbjct: 576 PQQLVAATAASGGGAGAGAPAGP 598 >gi|239757181 PREDICTED: hypothetical protein XP_002345195 [Homo sapiens] Length = 129 Score = 33.1 bits (74), Expect = 0.15 Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 12 PGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRC 71 P ++ + RR + T W+ R A AR + A GA + GS C Sbjct: 6 PYSAESTCRRPSLSTCSWKARTWSMKATARSAAIGAAWRPAAASSGA-----VCRGSAAC 60 Query: 72 REVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLL 122 S +L R S TW G S G W A + +SR + S L Sbjct: 61 AAFSTKSSLQLR---RSSATWSATGSSGKKGAWRAHSTVLKSSRAASSHTL 108 >gi|239751691 PREDICTED: hypothetical protein [Homo sapiens] Length = 129 Score = 33.1 bits (74), Expect = 0.15 Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 12 PGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRC 71 P ++ + RR + T W+ R A AR + A GA + GS C Sbjct: 6 PYSAESTCRRPSLSTCSWKARTWSMKATARSAAIGAAWRPAAASSGA-----VCRGSAAC 60 Query: 72 REVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLL 122 S +L R S TW G S G W A + +SR + S L Sbjct: 61 AAFSTKSSLQLR---RSSATWSATGSSGKKGAWRAHSTVLKSSRAASSHTL 108 >gi|239746195 PREDICTED: hypothetical protein XP_002343673 [Homo sapiens] Length = 129 Score = 33.1 bits (74), Expect = 0.15 Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 8/111 (7%) Query: 12 PGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRC 71 P ++ + RR + T W+ R A AR + A GA + GS C Sbjct: 6 PYSAESTCRRPSLSTCSWKARTWSMKATARSAAIGAAWRPAAASSGA-----VCRGSAAC 60 Query: 72 REVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLL 122 S +L R S TW G S G W A + +SR + S L Sbjct: 61 AAFSTKSSLQLR---RSSATWSATGSSGKKGAWRAHSTVLKSSRAASSHTL 108 >gi|30425394 hypothetical protein LOC128876 [Homo sapiens] Length = 747 Score = 33.1 bits (74), Expect = 0.15 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 24/127 (18%) Query: 41 REGRLVQMQPLPPAGFGAGGSQPLAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAV 100 RE R + + P GF GG PL+P +LR P +A RP V Sbjct: 295 REFRCLYAESQPVEGF-CGGEDPLSPRALR--------PPPVALAFRPD----------V 335 Query: 101 PGVWLAQAEESSASRVSGSRLLPDRVFMATASGG-----GAGGAARGPFPRDLAGATCCR 155 P + +S S + S L+ ++A GG G ++ GP R+ +G Sbjct: 336 PSPTSSLPSSTSLSSIKQSPLMGRSSYLALPGGGDCSDTGVVSSSLGPARREASGQPSLH 395 Query: 156 ESRSSPS 162 S P+ Sbjct: 396 RQLSDPN 402 >gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] Length = 1006 Score = 33.1 bits (74), Expect = 0.15 Identities = 47/189 (24%), Positives = 68/189 (35%), Gaps = 46/189 (24%) Query: 9 RMVPGASGTKTRRAASVTGPWEPRDCGATA---------AAREGRLVQMQPLPPAGFGAG 59 ++ P + G+ ++ ++ GP D G A E + + P A G Sbjct: 393 KLPPDSLGSFQQQHTALQGPLASADLGLAPTPSPGLDRKALAEATNGEARAEPLAQNGGS 452 Query: 60 GSQPLAPGSLRCREVV----------GASGPRLASR-----------VRPSRTWRRRGVS 98 P AP S++ V G GP+ SR V+ + G S Sbjct: 453 SEPPAAPRSIKVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSPAPARVKAELSSPTPGSS 512 Query: 99 AVPG-------VWLAQ-------AEESSASRVSGSRLLPDRVFMATASGGGAGGAARGPF 144 VPG ++L Q A +S S L+ R + +G GAGGA G F Sbjct: 513 PVPGELGLAGALFLPQYVFGPDAAPPASEILAKMSELVHSR--LQQGAGAGAGGAQTGLF 570 Query: 145 PRDLAGATC 153 P GATC Sbjct: 571 PGAPKGATC 579 >gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] Length = 2400 Score = 32.7 bits (73), Expect = 0.20 Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 17/139 (12%) Query: 34 CGATAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRCRE----VVGASGPRLASRVR-- 87 C + + + Q P P A + G P P C + G++G S R Sbjct: 825 CCSQPGTQPAQEAQRGPSPEASWLCGRYCPTPPRGRPCPQRRSSSCGSTGSSHQSTARGP 884 Query: 88 ---PSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMATASGGGAGGAARGPF 144 P R+ G + PG + SSAS+ +GSR L + SGGG G Sbjct: 885 GGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRGLSEE--KTLRSGGGPQG------ 936 Query: 145 PRDLAGATCCRESRSSPSA 163 + +G + RSSP A Sbjct: 937 QEEASGVSPSSLPRSSPEA 955 >gi|239757626 PREDICTED: hypothetical protein XP_002345507 [Homo sapiens] Length = 609 Score = 32.3 bits (72), Expect = 0.26 Identities = 44/155 (28%), Positives = 54/155 (34%), Gaps = 18/155 (11%) Query: 7 EGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPLAP 66 E R+ P A R G + R +A + V P P A G+G P P Sbjct: 445 EHRLGPHAPMPSPRCPGEAQGVTDGRRASPSAPGGDQDRVSTTPQPTAQPGSGAG-PQRP 503 Query: 67 GSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRV 126 G + R G P S R + + RR G A P +A+AE G R D Sbjct: 504 GPTQKRGGRGVRVPE-GSPARIAFSGRRGGAKAQP---MAEAESL------GDRERRD-- 551 Query: 127 FMATASGGGAGGAARGPFPRDLAGATCCRESRSSP 161 GG AGG A GA C S P Sbjct: 552 -----GGGAAGGGAVAQLRAVGQGALCAAPRDSGP 581 >gi|114431216 tumor protein p53 inducible protein 13 [Homo sapiens] Length = 393 Score = 32.3 bits (72), Expect = 0.26 Identities = 38/143 (26%), Positives = 51/143 (35%), Gaps = 25/143 (17%) Query: 4 VKREGRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQP 63 V +G P +SG K RR + GP R +A G L Q + G G + Sbjct: 189 VTSQGPRQPSSSGAKRRRLRAALGPQPTRSALRFPSASPGSLKAKQSMA----GIPGRES 244 Query: 64 LAPGSLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLP 123 AP + GA G +SR + PG + ++ S A R + P Sbjct: 245 NAPSVPTVSLLPGAPGGNASSRTEA----QVPNGQGSPGGCVCSSQASPAPRAAA----P 296 Query: 124 DRVFMATASGGGAGGAARGPFPR 146 R AARGP PR Sbjct: 297 PR-------------AARGPTPR 306 >gi|148664228 hypothetical protein LOC158293 [Homo sapiens] Length = 256 Score = 32.3 bits (72), Expect = 0.26 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 80 PRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMATASGGGAG-G 138 PR +R R W RG+ P + S +R G+R R AT G G G Sbjct: 32 PRTPNRDSWRRAWAARGLHPRPSILQPGPARLSRARAGGTRCPQRRHGRATFCALGRGIG 91 Query: 139 AARGPFPR 146 RGP PR Sbjct: 92 VRRGPGPR 99 >gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] Length = 671 Score = 32.3 bits (72), Expect = 0.26 Identities = 36/123 (29%), Positives = 46/123 (37%), Gaps = 18/123 (14%) Query: 47 QMQPLPPAGFGAGGSQPLAPG----SLRCREVVGASGPRLASRVRPSRTWRRRGVSAVPG 102 Q P PAG AGG + AP + CRE G + P RR A PG Sbjct: 253 QDAPRDPAGEPAGGEEVPAPADRAPARSCREAEGLAHPGDTGARGEDAAGHRR---AEPG 309 Query: 103 VWLAQAEESSASRVSGSRLLPDRVFMATASGGGAGGAARGPFPRDLAGATCCRESRSSPS 162 E +A S + +P + S GG+G A P P + + S PS Sbjct: 310 ----PGEVRTAEDASRTGAVPVKTVPLVDSEGGSGRAPAAPDPASV-------DPPSDPS 358 Query: 163 ARR 165 A R Sbjct: 359 ADR 361 >gi|33188461 GATA binding protein 4 [Homo sapiens] Length = 442 Score = 32.0 bits (71), Expect = 0.34 Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 21/155 (13%) Query: 13 GASGTKTRRAASVTGPWEPRDC-GATAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRC 71 GASG + AAS GP + G + A +G P+ P S P GSL Sbjct: 65 GASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPRF-----SFPGTTGSLAA 119 Query: 72 REVVGASGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMAT- 130 A+ R + + G +A G LA E+ + +GS P +MA Sbjct: 120 AAAAAAA--------REAAAYSSGGGAA--GAGLAGREQYGRAGFAGSYSSPYPAYMADV 169 Query: 131 -ASGGGAGGAARGPFPRDLAGATCCRESRSSPSAR 164 AS A A+ GPF + + R++P+AR Sbjct: 170 GASWAAAAAASAGPFDSPVLHSL---PGRANPAAR 201 >gi|5454102 transforming, acidic coiled-coil containing protein 3 [Homo sapiens] Length = 838 Score = 32.0 bits (71), Expect = 0.34 Identities = 21/62 (33%), Positives = 27/62 (43%) Query: 8 GRMVPGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPLAPG 67 GR VP A+ T + A+ T PR+ G L P PP G A G PL+ G Sbjct: 572 GRPVPVATETSSMHGANETPSGRPREAKLVEFDFLGALDIPVPGPPPGVPAPGGPPLSTG 631 Query: 68 SL 69 + Sbjct: 632 PI 633 >gi|65301130 kazrin isoform B [Homo sapiens] Length = 415 Score = 32.0 bits (71), Expect = 0.34 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 47 QMQPLPPAGFGAGGSQPLAPGSLRCREVVGASGP 80 Q +P P G GAG ++P PG C + V A+GP Sbjct: 18 QGEPAPSCGAGAGPARP--PGPAACEQCVDAAGP 49 >gi|112420992 crumbs homolog 2 [Homo sapiens] Length = 1285 Score = 32.0 bits (71), Expect = 0.34 Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 14/70 (20%) Query: 12 PGASGTKTRRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPLAPGSLRC 71 PG T GP EPR C AT G L Q P GF RC Sbjct: 49 PGTECQATESGGYTCGPMEPRGC-ATQPCHHGALCVPQGPDPTGF-------------RC 94 Query: 72 REVVGASGPR 81 V G GPR Sbjct: 95 YCVPGFQGPR 104 >gi|148922920 DENN/MADD domain containing 4B [Homo sapiens] Length = 1496 Score = 32.0 bits (71), Expect = 0.34 Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 9/103 (8%) Query: 27 GPWEPRDCGATAAAREGRLVQM-----QPLPPAGFGAGGSQPLAPGSLRCREVVGASGPR 81 G EPR G+ +G L + +PLP G GS L+ S E + GP+ Sbjct: 986 GVLEPR--GSPVPWHDGSLSDLSLTGEEPLPGGSPGGSGSA-LSAQSTEALEGLSGRGPK 1042 Query: 82 LASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPD 124 R + T RRG+ A L + S ASR+ L PD Sbjct: 1043 AGGRQDEAGT-PRRGLGARLQQLLTPSRHSPASRIPPPELPPD 1084 >gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] Length = 382 Score = 31.6 bits (70), Expect = 0.44 Identities = 32/110 (29%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 78 SGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMATASGGGAG 137 +GP S RRRG +P SA G+R RV T G Sbjct: 67 AGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLD 126 Query: 138 GAARGPFPRDLAGATCCRESRSS--PSARRHLFQPLRARGLLHSSWTSPG 185 A P P LA CR++R+ S L PLR W PG Sbjct: 127 PAVPSPTPAPLAR---CRQTRAGLRLSTGGRLSPPLRRAA--SGEWKRPG 171 Score = 29.6 bits (65), Expect = 1.7 Identities = 51/173 (29%), Positives = 64/173 (36%), Gaps = 41/173 (23%) Query: 20 RRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPL-APGSLRCREVVGAS 78 RRAAS G W+ R G L Q + AG GAGG++ PG LR Sbjct: 160 RRAAS--GEWK----------RPGGLTQGEF---AGRGAGGARVTHRPGRLR-------- 196 Query: 79 GPRLASRVRPSRTW--RRRGVSAVP-------------GVWLAQAEESSASRVSGSRLLP 123 PR R R RT RRRG + G E + +R G Sbjct: 197 -PRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFG 255 Query: 124 DRVFMATASGGGAGGAARGPF-PRDLAGATCCRESRSSPSARRHLFQPLRARG 175 R M SGGG+GG G + P +C + +R +P R RG Sbjct: 256 PRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRG 308 >gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo sapiens] Length = 382 Score = 31.6 bits (70), Expect = 0.44 Identities = 32/110 (29%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 78 SGPRLASRVRPSRTWRRRGVSAVPGVWLAQAEESSASRVSGSRLLPDRVFMATASGGGAG 137 +GP S RRRG +P SA G+R RV T G Sbjct: 67 AGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLD 126 Query: 138 GAARGPFPRDLAGATCCRESRSS--PSARRHLFQPLRARGLLHSSWTSPG 185 A P P LA CR++R+ S L PLR W PG Sbjct: 127 PAVPSPTPAPLAR---CRQTRAGLRLSTGGRLSPPLRRAA--SGEWKRPG 171 Score = 29.6 bits (65), Expect = 1.7 Identities = 51/173 (29%), Positives = 64/173 (36%), Gaps = 41/173 (23%) Query: 20 RRAASVTGPWEPRDCGATAAAREGRLVQMQPLPPAGFGAGGSQPL-APGSLRCREVVGAS 78 RRAAS G W+ R G L Q + AG GAGG++ PG LR Sbjct: 160 RRAAS--GEWK----------RPGGLTQGEF---AGRGAGGARVTHRPGRLR-------- 196 Query: 79 GPRLASRVRPSRTW--RRRGVSAVP-------------GVWLAQAEESSASRVSGSRLLP 123 PR R R RT RRRG + G E + +R G Sbjct: 197 -PRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFG 255 Query: 124 DRVFMATASGGGAGGAARGPF-PRDLAGATCCRESRSSPSARRHLFQPLRARG 175 R M SGGG+GG G + P +C + +R +P R RG Sbjct: 256 PRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRG 308 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.132 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,010,402 Number of Sequences: 37866 Number of extensions: 461625 Number of successful extensions: 2437 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 128 Number of HSP's that attempted gapping in prelim test: 2368 Number of HSP's gapped (non-prelim): 194 length of query: 194 length of database: 18,247,518 effective HSP length: 97 effective length of query: 97 effective length of database: 14,574,516 effective search space: 1413728052 effective search space used: 1413728052 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.